StartDate: 2021-04-21 11:02:38+00:00 CpuId: 32x Intel Xeon W 2000 / Scalable Bronze 3000 / Silver 4000 / Gold 5000 / 6000 / Platinum 8000 (Skylake), 14nm CommitSHA: 4ceb55d7728e483bd4825e6faf97f65e69b001d5 CommitTime: 2021-04-20 23:57:53 +0200 CommitAuthor: Ole Schütt CommitSubject: grid: Refactor GPU backend Trying to pull image cp2k-doxygen... image not found. #################### Building Image cp2k-doxygen #################### Dockerfile: /tools/docker/Dockerfile.test_doxygen Build-Args: Sending build context to Docker daemon 74.24kB Step 1/8 : FROM ubuntu:20.04 20.04: Pulling from library/ubuntu a70d879fa598: Pulling fs layer c4394a92d1f8: Pulling fs layer 10e6159c56c0: Pulling fs layer 10e6159c56c0: Verifying Checksum 10e6159c56c0: Download complete c4394a92d1f8: Download complete a70d879fa598: Verifying Checksum a70d879fa598: Download complete a70d879fa598: Pull complete c4394a92d1f8: Pull complete 10e6159c56c0: Pull complete Digest: sha256:3c9c713e0979e9bd6061ed52ac1e9e1f246c9495aa063619d9d695fb8039aa1f Status: Downloaded newer image for ubuntu:20.04 ---> 26b77e58432b Step 2/8 : WORKDIR /workspace ---> Running in 5bd246f101c6 Removing intermediate container 5bd246f101c6 ---> 595b628f412c Step 3/8 : COPY ./scripts/install_basics.sh . ---> 6a25737639c4 Step 4/8 : RUN ./install_basics.sh ---> Running in 978ae3ccdb03 Installing Ubuntu packages... debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libssl1.1:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 4121 files and directories currently installed.) Preparing to unpack .../libssl1.1_1.1.1f-1ubuntu2.3_amd64.deb ... Unpacking libssl1.1:amd64 (1.1.1f-1ubuntu2.3) ... Selecting previously unselected package libpython3.8-minimal:amd64. Preparing to unpack .../libpython3.8-minimal_3.8.5-1~20.04.2_amd64.deb ... Unpacking libpython3.8-minimal:amd64 (3.8.5-1~20.04.2) ... Selecting previously unselected package libexpat1:amd64. Preparing to unpack .../libexpat1_2.2.9-1build1_amd64.deb ... Unpacking libexpat1:amd64 (2.2.9-1build1) ... Selecting previously unselected package python3.8-minimal. Preparing to unpack .../python3.8-minimal_3.8.5-1~20.04.2_amd64.deb ... Unpacking python3.8-minimal (3.8.5-1~20.04.2) ... Setting up libssl1.1:amd64 (1.1.1f-1ubuntu2.3) ... debconf: unable to initialize frontend: Dialog debconf: (TERM is not set, so the dialog frontend is not usable.) debconf: falling back to frontend: Readline debconf: unable to initialize frontend: Readline debconf: (Can't locate Term/ReadLine.pm in @INC (you may need to install the Term::ReadLine module) (@INC contains: /etc/perl /usr/local/lib/x86_64-linux-gnu/perl/5.30.0 /usr/local/share/perl/5.30.0 /usr/lib/x86_64-linux-gnu/perl5/5.30 /usr/share/perl5 /usr/lib/x86_64-linux-gnu/perl/5.30 /usr/share/perl/5.30 /usr/local/lib/site_perl /usr/lib/x86_64-linux-gnu/perl-base) at /usr/share/perl5/Debconf/FrontEnd/Readline.pm line 7.) debconf: falling back to frontend: Teletype Setting up libpython3.8-minimal:amd64 (3.8.5-1~20.04.2) ... Setting up libexpat1:amd64 (2.2.9-1build1) ... Setting up python3.8-minimal (3.8.5-1~20.04.2) ... Selecting previously unselected package python3-minimal. (Reading database ... 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Preparing to unpack .../01-libpopt0_1.16-14_amd64.deb ... Unpacking libpopt0:amd64 (1.16-14) ... Selecting previously unselected package rsync. Preparing to unpack .../02-rsync_3.1.3-8_amd64.deb ... Unpacking rsync (3.1.3-8) ... Selecting previously unselected package perl-modules-5.30. Preparing to unpack .../03-perl-modules-5.30_5.30.0-9ubuntu0.2_all.deb ... Unpacking perl-modules-5.30 (5.30.0-9ubuntu0.2) ... Selecting previously unselected package libgdbm6:amd64. Preparing to unpack .../04-libgdbm6_1.18.1-5_amd64.deb ... Unpacking libgdbm6:amd64 (1.18.1-5) ... Selecting previously unselected package libgdbm-compat4:amd64. Preparing to unpack .../05-libgdbm-compat4_1.18.1-5_amd64.deb ... Unpacking libgdbm-compat4:amd64 (1.18.1-5) ... Selecting previously unselected package libperl5.30:amd64. Preparing to unpack .../06-libperl5.30_5.30.0-9ubuntu0.2_amd64.deb ... Unpacking libperl5.30:amd64 (5.30.0-9ubuntu0.2) ... Selecting previously unselected package perl. 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Unpacking libhcrypto4-heimdal:amd64 (7.7.0+dfsg-1ubuntu1) ... Selecting previously unselected package libwind0-heimdal:amd64. Preparing to unpack .../24-libwind0-heimdal_7.7.0+dfsg-1ubuntu1_amd64.deb ... Unpacking libwind0-heimdal:amd64 (7.7.0+dfsg-1ubuntu1) ... Selecting previously unselected package libhx509-5-heimdal:amd64. Preparing to unpack .../25-libhx509-5-heimdal_7.7.0+dfsg-1ubuntu1_amd64.deb ... Unpacking libhx509-5-heimdal:amd64 (7.7.0+dfsg-1ubuntu1) ... Selecting previously unselected package libkrb5-26-heimdal:amd64. Preparing to unpack .../26-libkrb5-26-heimdal_7.7.0+dfsg-1ubuntu1_amd64.deb ... Unpacking libkrb5-26-heimdal:amd64 (7.7.0+dfsg-1ubuntu1) ... Selecting previously unselected package libheimntlm0-heimdal:amd64. Preparing to unpack .../27-libheimntlm0-heimdal_7.7.0+dfsg-1ubuntu1_amd64.deb ... Unpacking libheimntlm0-heimdal:amd64 (7.7.0+dfsg-1ubuntu1) ... Selecting previously unselected package libgssapi3-heimdal:amd64. 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Unpacking git-man (1:2.25.1-1ubuntu3.1) ... Selecting previously unselected package git. Preparing to unpack .../39-git_1%3a2.25.1-1ubuntu3.1_amd64.deb ... Unpacking git (1:2.25.1-1ubuntu3.1) ... Setting up libkeyutils1:amd64 (1.6-6ubuntu1) ... Setting up libpsl5:amd64 (0.21.0-1ubuntu1) ... Setting up perl-modules-5.30 (5.30.0-9ubuntu0.2) ... Setting up mime-support (3.64ubuntu1) ... Setting up wget (1.20.3-1ubuntu1) ... Setting up libbrotli1:amd64 (1.0.7-6ubuntu0.1) ... Setting up libsqlite3-0:amd64 (3.31.1-4ubuntu0.2) ... Setting up libnghttp2-14:amd64 (1.40.0-1build1) ... Setting up less (551-1ubuntu0.1) ... Setting up libldap-common (2.4.49+dfsg-2ubuntu1.7) ... Setting up libkrb5support0:amd64 (1.17-6ubuntu4.1) ... Setting up libsasl2-modules-db:amd64 (2.1.27+dfsg-2) ... Setting up librtmp1:amd64 (2.4+20151223.gitfa8646d.1-2build1) ... Setting up libk5crypto3:amd64 (1.17-6ubuntu4.1) ... Setting up libsasl2-2:amd64 (2.1.27+dfsg-2) ... Setting up libroken18-heimdal:amd64 (7.7.0+dfsg-1ubuntu1) ... Setting up nano (4.8-1ubuntu1) ... update-alternatives: using /bin/nano to provide /usr/bin/editor (editor) in auto mode update-alternatives: warning: skip creation of /usr/share/man/man1/editor.1.gz because associated file /usr/share/man/man1/nano.1.gz (of link group editor) doesn't exist update-alternatives: using /bin/nano to provide /usr/bin/pico (pico) in auto mode update-alternatives: warning: skip creation of /usr/share/man/man1/pico.1.gz because associated file /usr/share/man/man1/nano.1.gz (of link group pico) doesn't exist Setting up git-man (1:2.25.1-1ubuntu3.1) ... Setting up libkrb5-3:amd64 (1.17-6ubuntu4.1) ... Setting up libmpdec2:amd64 (2.4.2-3) ... Setting up openssl (1.1.1f-1ubuntu2.3) ... Setting up readline-common (8.0-4) ... Setting up libheimbase1-heimdal:amd64 (7.7.0+dfsg-1ubuntu1) ... Setting up libgdbm6:amd64 (1.18.1-5) ... Setting up libpopt0:amd64 (1.16-14) ... Setting up libasn1-8-heimdal:amd64 (7.7.0+dfsg-1ubuntu1) ... Setting up libreadline8:amd64 (8.0-4) ... Setting up libhcrypto4-heimdal:amd64 (7.7.0+dfsg-1ubuntu1) ... Setting up ca-certificates (20210119~20.04.1) ... debconf: unable to initialize frontend: Dialog debconf: (TERM is not set, so the dialog frontend is not usable.) debconf: falling back to frontend: Readline Updating certificates in /etc/ssl/certs... 129 added, 0 removed; done. Setting up libwind0-heimdal:amd64 (7.7.0+dfsg-1ubuntu1) ... Setting up libgssapi-krb5-2:amd64 (1.17-6ubuntu4.1) ... Setting up libgdbm-compat4:amd64 (1.18.1-5) ... Setting up libssh-4:amd64 (0.9.3-2ubuntu2.1) ... Setting up libperl5.30:amd64 (5.30.0-9ubuntu0.2) ... Setting up libpython3.8-stdlib:amd64 (3.8.5-1~20.04.2) ... Setting up python3.8 (3.8.5-1~20.04.2) ... Setting up rsync (3.1.3-8) ... invoke-rc.d: could not determine current runlevel invoke-rc.d: policy-rc.d denied execution of start. Setting up libpython3-stdlib:amd64 (3.8.2-0ubuntu2) ... Setting up libhx509-5-heimdal:amd64 (7.7.0+dfsg-1ubuntu1) ... Setting up python3 (3.8.2-0ubuntu2) ... running python rtupdate hooks for python3.8... running python post-rtupdate hooks for python3.8... Setting up perl (5.30.0-9ubuntu0.2) ... Setting up libkrb5-26-heimdal:amd64 (7.7.0+dfsg-1ubuntu1) ... Setting up libheimntlm0-heimdal:amd64 (7.7.0+dfsg-1ubuntu1) ... Setting up liberror-perl (0.17029-1) ... Setting up libgssapi3-heimdal:amd64 (7.7.0+dfsg-1ubuntu1) ... Setting up libldap-2.4-2:amd64 (2.4.49+dfsg-2ubuntu1.7) ... Setting up libcurl3-gnutls:amd64 (7.68.0-1ubuntu2.5) ... Setting up git (1:2.25.1-1ubuntu3.1) ... Processing triggers for libc-bin (2.31-0ubuntu9.2) ... Processing triggers for ca-certificates (20210119~20.04.1) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. done. Cloning cp2k repository... done. Removing intermediate container 978ae3ccdb03 ---> 8a0587b3ab2d Step 5/8 : COPY ./scripts/install_doxygen.sh . ---> b44d2a44625d Step 6/8 : RUN ./install_doxygen.sh ---> Running in bd7f80d6cb9c debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libbsd0:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 8372 files and directories currently installed.) Preparing to unpack .../00-libbsd0_0.10.0-1_amd64.deb ... Unpacking libbsd0:amd64 (0.10.0-1) ... Selecting previously unselected package libfribidi0:amd64. Preparing to unpack .../01-libfribidi0_1.0.8-2_amd64.deb ... Unpacking libfribidi0:amd64 (1.0.8-2) ... Selecting previously unselected package libglib2.0-0:amd64. Preparing to unpack .../02-libglib2.0-0_2.64.6-1~ubuntu20.04.3_amd64.deb ... Unpacking libglib2.0-0:amd64 (2.64.6-1~ubuntu20.04.3) ... Selecting previously unselected package ucf. Preparing to unpack .../03-ucf_3.0038+nmu1_all.deb ... Moving old data out of the way Unpacking ucf (3.0038+nmu1) ... Selecting previously unselected package libedit2:amd64. Preparing to unpack .../04-libedit2_3.1-20191231-1_amd64.deb ... Unpacking libedit2:amd64 (3.1-20191231-1) ... Selecting previously unselected package libpng16-16:amd64. Preparing to unpack .../05-libpng16-16_1.6.37-2_amd64.deb ... Unpacking libpng16-16:amd64 (1.6.37-2) ... Selecting previously unselected package libxau6:amd64. 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Preparing to unpack .../57-make_4.2.1-1.2_amd64.deb ... Unpacking make (4.2.1-1.2) ... Setting up libgraphite2-3:amd64 (1.3.13-11build1) ... Setting up libpixman-1-0:amd64 (0.38.4-0ubuntu1) ... Setting up libxapian30:amd64 (1.4.14-2) ... Setting up libxau6:amd64 (1:1.0.9-0ubuntu1) ... Setting up libdatrie1:amd64 (0.2.12-3) ... Setting up libglib2.0-0:amd64 (2.64.6-1~ubuntu20.04.3) ... No schema files found: doing nothing. Setting up liblab-gamut1:amd64 (2.42.2-3build2) ... Setting up x11-common (1:7.7+19ubuntu14) ... debconf: unable to initialize frontend: Dialog debconf: (TERM is not set, so the dialog frontend is not usable.) debconf: falling back to frontend: Readline update-rc.d: warning: start and stop actions are no longer supported; falling back to defaults invoke-rc.d: could not determine current runlevel invoke-rc.d: policy-rc.d denied execution of start. Setting up libjbig0:amd64 (2.1-3.1build1) ... Setting up libgts-0.7-5:amd64 (0.7.6+darcs121130-4) ... Setting up libx11-data (2:1.6.9-2ubuntu1.1) ... Setting up make (4.2.1-1.2) ... Setting up libpathplan4:amd64 (2.42.2-3build2) ... Setting up libann0 (1.1.2+doc-7build1) ... Setting up libfribidi0:amd64 (1.0.8-2) ... Setting up libpng16-16:amd64 (1.6.37-2) ... Setting up libwebp6:amd64 (0.6.1-2) ... Setting up fonts-dejavu-core (2.37-1) ... Setting up ucf (3.0038+nmu1) ... debconf: unable to initialize frontend: Dialog debconf: (TERM is not set, so the dialog frontend is not usable.) debconf: falling back to frontend: Readline Setting up libjpeg-turbo8:amd64 (2.0.3-0ubuntu1.20.04.1) ... Setting up libltdl7:amd64 (2.4.6-14) ... Setting up libthai-data (0.1.28-3) ... Setting up libcdt5:amd64 (2.42.2-3build2) ... Setting up libcgraph6:amd64 (2.42.2-3build2) ... Setting up libbsd0:amd64 (0.10.0-1) ... Setting up libjpeg8:amd64 (8c-2ubuntu8) ... Setting up libice6:amd64 (2:1.0.10-0ubuntu1) ... Setting up libxdmcp6:amd64 (1:1.1.3-0ubuntu1) ... Setting up libxcb1:amd64 (1.14-2) ... Setting up libxcb-render0:amd64 (1.14-2) ... Setting up fontconfig-config (2.13.1-2ubuntu3) ... Setting up libedit2:amd64 (3.1-20191231-1) ... Setting up libxcb-shm0:amd64 (1.14-2) ... Setting up libllvm10:amd64 (1:10.0.0-4ubuntu1) ... Setting up libthai0:amd64 (0.1.28-3) ... Setting up libfreetype6:amd64 (2.10.1-2ubuntu0.1) ... Setting up libclang1-10 (1:10.0.0-4ubuntu1) ... Setting up libgvpr2:amd64 (2.42.2-3build2) ... Setting up libx11-6:amd64 (2:1.6.9-2ubuntu1.1) ... Setting up libharfbuzz0b:amd64 (2.6.4-1ubuntu4) ... Setting up libtiff5:amd64 (4.1.0+git191117-2ubuntu0.20.04.1) ... Setting up libfontconfig1:amd64 (2.13.1-2ubuntu3) ... Setting up libsm6:amd64 (2:1.2.3-1) ... Setting up fontconfig (2.13.1-2ubuntu3) ... Regenerating fonts cache... done. Setting up libxpm4:amd64 (1:3.5.12-1) ... Setting up libxrender1:amd64 (1:0.9.10-1) ... Setting up libpango-1.0-0:amd64 (1.44.7-2ubuntu4) ... Setting up libxext6:amd64 (2:1.3.4-0ubuntu1) ... Setting up libcairo2:amd64 (1.16.0-4ubuntu1) ... Setting up doxygen (1.8.17-0ubuntu2) ... Setting up libgd3:amd64 (2.2.5-5.2ubuntu2) ... Setting up libxt6:amd64 (1:1.1.5-1) ... Setting up libpangoft2-1.0-0:amd64 (1.44.7-2ubuntu4) ... Setting up libpangocairo-1.0-0:amd64 (1.44.7-2ubuntu4) ... Setting up libxmu6:amd64 (2:1.1.3-0ubuntu1) ... Setting up libxaw7:amd64 (2:1.0.13-1) ... Setting up libgvc6 (2.42.2-3build2) ... Setting up graphviz (2.42.2-3build2) ... Processing triggers for libc-bin (2.31-0ubuntu9.2) ... Removing intermediate container bd7f80d6cb9c ---> 6075a8f3192e Step 7/8 : COPY ./scripts/ci_entrypoint.sh ./scripts/test_doxygen.sh ./ ---> cc2c4dd51e2b Step 8/8 : CMD ["./ci_entrypoint.sh", "./test_doxygen.sh"] ---> Running in bf2c48a02c7d Removing intermediate container bf2c48a02c7d ---> f31280369905 Successfully built f31280369905 Successfully tagged gcr.io/cp2k-org-project/img_cp2k-doxygen-arch-f73:gittree-a03e945-buildargs-68b329d Pushing image cp2k-doxygen... done. #################### Running Image cp2k-doxygen #################### ========== Fetching Git Commit ========== CommitSHA: 4ceb55d7728e483bd4825e6faf97f65e69b001d5 CommitTime: 2021-04-20 23:57:53 +0200 CommitAuthor: Ole Schütt CommitSubject: grid: Refactor GPU backend ========== Running Test ========== ========== Generating Doxygen ========== Summary: Doxygen generation works fine. Status: OK Uploading artifacts... done EndDate: 2021-04-21 11:11:00+00:00