StartDate: 2021-10-20 11:02:29+00:00 CpuId: 32x Intel Xeon W 2000 / D-2100 (Skylake / Cascade Lake) {Skylake}, 14nm CommitSHA: d61f55c125c3b22ef4add13a11f65676c5c5661a CommitTime: 2021-10-20 11:18:59 +0200 CommitAuthor: Matthias Krack CommitSubject: Adjust tolerances Trying to pull image cp2k-toolchain-mpich... success :-) Trying to pull image cp2k-manual... image not found. #################### Building Image cp2k-manual #################### Dockerfile: /tools/docker/Dockerfile.test_manual Build-Args: TOOLCHAIN=gcr.io/cp2k-org-project/img_cp2k-toolchain-mpich-arch-b51:gittree-0aac0cd-buildargs-68b329d Sending build context to Docker daemon 78.85kB Step 1/9 : ARG TOOLCHAIN=cp2k/toolchain:latest Step 2/9 : FROM ${TOOLCHAIN} ---> 9d995366e1d7 Step 3/9 : WORKDIR /workspace ---> Running in 4bf8a54069f3 Removing intermediate container 4bf8a54069f3 ---> c40a982e892e Step 4/9 : COPY ./scripts/install_basics.sh . ---> 31021fdce8f0 Step 5/9 : RUN ./install_basics.sh ---> Running in aefe615ee6bd Installing Ubuntu packages... debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libpopt0:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15383 files and directories currently installed.) Preparing to unpack .../libpopt0_1.16-14_amd64.deb ... Unpacking libpopt0:amd64 (1.16-14) ... Selecting previously unselected package rsync. Preparing to unpack .../rsync_3.1.3-8_amd64.deb ... Unpacking rsync (3.1.3-8) ... Setting up libpopt0:amd64 (1.16-14) ... Setting up rsync (3.1.3-8) ... invoke-rc.d: could not determine current runlevel invoke-rc.d: policy-rc.d denied execution of start. Processing triggers for libc-bin (2.31-0ubuntu9.2) ... done. Cloning cp2k repository... done. Removing intermediate container aefe615ee6bd ---> 4f49685d9fa5 Step 6/9 : COPY ./scripts/install_manual.sh . ---> 5cbdbe9389e0 Step 7/9 : RUN ./install_manual.sh ---> Running in fc2951408ace debconf: delaying package configuration, since apt-utils is not installed Selecting previously unselected package libdbus-1-3:amd64. (Reading database ... (Reading database ... 5% (Reading database ... 10% (Reading database ... 15% (Reading database ... 20% (Reading database ... 25% (Reading database ... 30% (Reading database ... 35% (Reading database ... 40% (Reading database ... 45% (Reading database ... 50% (Reading database ... 55% (Reading database ... 60% (Reading database ... 65% (Reading database ... 70% (Reading database ... 75% (Reading database ... 80% (Reading database ... 85% (Reading database ... 90% (Reading database ... 95% (Reading database ... 100% (Reading database ... 15419 files and directories currently installed.) Preparing to unpack .../00-libdbus-1-3_1.12.16-2ubuntu2.1_amd64.deb ... Unpacking libdbus-1-3:amd64 (1.12.16-2ubuntu2.1) ... Selecting previously unselected package ucf. Preparing to unpack .../01-ucf_3.0038+nmu1_all.deb ... Moving old data out of the way Unpacking ucf (3.0038+nmu1) ... Selecting previously unselected package libpng16-16:amd64. Preparing to unpack .../02-libpng16-16_1.6.37-2_amd64.deb ... Unpacking libpng16-16:amd64 (1.6.37-2) ... Selecting previously unselected package java-common. Preparing to unpack .../03-java-common_0.72_all.deb ... Unpacking java-common (0.72) ... Selecting previously unselected package libavahi-common-data:amd64. Preparing to unpack .../04-libavahi-common-data_0.7-4ubuntu7.1_amd64.deb ... Unpacking libavahi-common-data:amd64 (0.7-4ubuntu7.1) ... Selecting previously unselected package libavahi-common3:amd64. Preparing to unpack .../05-libavahi-common3_0.7-4ubuntu7.1_amd64.deb ... Unpacking libavahi-common3:amd64 (0.7-4ubuntu7.1) ... Selecting previously unselected package libavahi-client3:amd64. Preparing to unpack .../06-libavahi-client3_0.7-4ubuntu7.1_amd64.deb ... Unpacking libavahi-client3:amd64 (0.7-4ubuntu7.1) ... Selecting previously unselected package libcups2:amd64. Preparing to unpack .../07-libcups2_2.3.1-9ubuntu1.1_amd64.deb ... Unpacking libcups2:amd64 (2.3.1-9ubuntu1.1) ... Selecting previously unselected package liblcms2-2:amd64. Preparing to unpack .../08-liblcms2-2_2.9-4_amd64.deb ... Unpacking liblcms2-2:amd64 (2.9-4) ... Selecting previously unselected package libjpeg-turbo8:amd64. Preparing to unpack .../09-libjpeg-turbo8_2.0.3-0ubuntu1.20.04.1_amd64.deb ... Unpacking libjpeg-turbo8:amd64 (2.0.3-0ubuntu1.20.04.1) ... Selecting previously unselected package libjpeg8:amd64. Preparing to unpack .../10-libjpeg8_8c-2ubuntu8_amd64.deb ... Unpacking libjpeg8:amd64 (8c-2ubuntu8) ... Selecting previously unselected package libfreetype6:amd64. Preparing to unpack .../11-libfreetype6_2.10.1-2ubuntu0.1_amd64.deb ... Unpacking libfreetype6:amd64 (2.10.1-2ubuntu0.1) ... Selecting previously unselected package fonts-dejavu-core. Preparing to unpack .../12-fonts-dejavu-core_2.37-1_all.deb ... Unpacking fonts-dejavu-core (2.37-1) ... Selecting previously unselected package fontconfig-config. Preparing to unpack .../13-fontconfig-config_2.13.1-2ubuntu3_all.deb ... Unpacking fontconfig-config (2.13.1-2ubuntu3) ... Selecting previously unselected package libfontconfig1:amd64. Preparing to unpack .../14-libfontconfig1_2.13.1-2ubuntu3_amd64.deb ... Unpacking libfontconfig1:amd64 (2.13.1-2ubuntu3) ... Selecting previously unselected package libnspr4:amd64. Preparing to unpack .../15-libnspr4_2%3a4.25-1_amd64.deb ... Unpacking libnspr4:amd64 (2:4.25-1) ... Selecting previously unselected package libnss3:amd64. Preparing to unpack .../16-libnss3_2%3a3.49.1-1ubuntu1.5_amd64.deb ... Unpacking libnss3:amd64 (2:3.49.1-1ubuntu1.5) ... Selecting previously unselected package libasound2-data. Preparing to unpack .../17-libasound2-data_1.2.2-2.1ubuntu2.4_all.deb ... Unpacking libasound2-data (1.2.2-2.1ubuntu2.4) ... Selecting previously unselected package libasound2:amd64. Preparing to unpack .../18-libasound2_1.2.2-2.1ubuntu2.4_amd64.deb ... Unpacking libasound2:amd64 (1.2.2-2.1ubuntu2.4) ... Selecting previously unselected package libgraphite2-3:amd64. Preparing to unpack .../19-libgraphite2-3_1.3.13-11build1_amd64.deb ... Unpacking libgraphite2-3:amd64 (1.3.13-11build1) ... Selecting previously unselected package libharfbuzz0b:amd64. Preparing to unpack .../20-libharfbuzz0b_2.6.4-1ubuntu4_amd64.deb ... Unpacking libharfbuzz0b:amd64 (2.6.4-1ubuntu4) ... Selecting previously unselected package libpcsclite1:amd64. Preparing to unpack .../21-libpcsclite1_1.8.26-3_amd64.deb ... Unpacking libpcsclite1:amd64 (1.8.26-3) ... Selecting previously unselected package openjdk-11-jre-headless:amd64. Preparing to unpack .../22-openjdk-11-jre-headless_11.0.11+9-0ubuntu2~20.04_amd64.deb ... Unpacking openjdk-11-jre-headless:amd64 (11.0.11+9-0ubuntu2~20.04) ... Selecting previously unselected package default-jre-headless. Preparing to unpack .../23-default-jre-headless_2%3a1.11-72_amd64.deb ... Unpacking default-jre-headless (2:1.11-72) ... Selecting previously unselected package ca-certificates-java. Preparing to unpack .../24-ca-certificates-java_20190405ubuntu1_all.deb ... Unpacking ca-certificates-java (20190405ubuntu1) ... Selecting previously unselected package libjaxen-java. Preparing to unpack .../25-libjaxen-java_1.1.6-4_all.deb ... Unpacking libjaxen-java (1.1.6-4) ... Selecting previously unselected package libdom4j-java. Preparing to unpack .../26-libdom4j-java_2.1.1-2_all.deb ... Unpacking libdom4j-java (2.1.1-2) ... Selecting previously unselected package libicu4j-java. Preparing to unpack .../27-libicu4j-java_62.1-2_all.deb ... Unpacking libicu4j-java (62.1-2) ... Selecting previously unselected package libjetbrains-annotations-java. Preparing to unpack .../28-libjetbrains-annotations-java_19.0.0-1_all.deb ... Unpacking libjetbrains-annotations-java (19.0.0-1) ... Selecting previously unselected package libintellij-annotations-java. Preparing to unpack .../29-libintellij-annotations-java_19.0.0-1_all.deb ... Unpacking libintellij-annotations-java (19.0.0-1) ... Selecting previously unselected package libjdom1-java. Preparing to unpack .../30-libjdom1-java_1.1.3-2_all.deb ... Unpacking libjdom1-java (1.1.3-2) ... Selecting previously unselected package libxml-commons-resolver1.1-java. Preparing to unpack .../31-libxml-commons-resolver1.1-java_1.2-9_all.deb ... Unpacking libxml-commons-resolver1.1-java (1.2-9) ... Selecting previously unselected package libxml-commons-external-java. Preparing to unpack .../32-libxml-commons-external-java_1.4.01-3_all.deb ... Unpacking libxml-commons-external-java (1.4.01-3) ... Selecting previously unselected package libxerces2-java. Preparing to unpack .../33-libxerces2-java_2.12.1-1_all.deb ... Unpacking libxerces2-java (2.12.1-1) ... Selecting previously unselected package libxom-java. Preparing to unpack .../34-libxom-java_1.2.10-1_all.deb ... Unpacking libxom-java (1.2.10-1) ... Selecting previously unselected package libsaxonhe-java. Preparing to unpack .../35-libsaxonhe-java_9.9.1.5+dfsg-1_all.deb ... Unpacking libsaxonhe-java (9.9.1.5+dfsg-1) ... Setting up libgraphite2-3:amd64 (1.3.13-11build1) ... Setting up liblcms2-2:amd64 (2.9-4) ... Setting up libjetbrains-annotations-java (19.0.0-1) ... Setting up libicu4j-java (62.1-2) ... Setting up java-common (0.72) ... Setting up libintellij-annotations-java (19.0.0-1) ... Setting up libasound2-data (1.2.2-2.1ubuntu2.4) ... Setting up libjaxen-java (1.1.6-4) ... Setting up libnspr4:amd64 (2:4.25-1) ... Setting up libavahi-common-data:amd64 (0.7-4ubuntu7.1) ... Setting up libdbus-1-3:amd64 (1.12.16-2ubuntu2.1) ... Setting up libpng16-16:amd64 (1.6.37-2) ... Setting up libxml-commons-resolver1.1-java (1.2-9) ... Setting up fonts-dejavu-core (2.37-1) ... Setting up libpcsclite1:amd64 (1.8.26-3) ... Setting up ucf (3.0038+nmu1) ... debconf: unable to initialize frontend: Dialog debconf: (TERM is not set, so the dialog frontend is not usable.) debconf: falling back to frontend: Readline Setting up libjpeg-turbo8:amd64 (2.0.3-0ubuntu1.20.04.1) ... Setting up libxml-commons-external-java (1.4.01-3) ... Setting up libasound2:amd64 (1.2.2-2.1ubuntu2.4) ... Setting up libxerces2-java (2.12.1-1) ... Setting up libjpeg8:amd64 (8c-2ubuntu8) ... Setting up libdom4j-java (2.1.1-2) ... Setting up fontconfig-config (2.13.1-2ubuntu3) ... Setting up libjdom1-java (1.1.3-2) ... Setting up libavahi-common3:amd64 (0.7-4ubuntu7.1) ... Setting up libnss3:amd64 (2:3.49.1-1ubuntu1.5) ... Setting up libxom-java (1.2.10-1) ... Setting up libfreetype6:amd64 (2.10.1-2ubuntu0.1) ... Setting up libharfbuzz0b:amd64 (2.6.4-1ubuntu4) ... Setting up libfontconfig1:amd64 (2.13.1-2ubuntu3) ... Setting up libavahi-client3:amd64 (0.7-4ubuntu7.1) ... Setting up libsaxonhe-java (9.9.1.5+dfsg-1) ... Setting up libcups2:amd64 (2.3.1-9ubuntu1.1) ... Setting up ca-certificates-java (20190405ubuntu1) ... head: cannot open '/etc/ssl/certs/java/cacerts' for reading: No such file or directory Adding debian:QuoVadis_Root_CA_3.pem Adding debian:Microsoft_RSA_Root_Certificate_Authority_2017.pem Adding debian:Baltimore_CyberTrust_Root.pem Adding debian:Starfield_Class_2_CA.pem Adding debian:Go_Daddy_Class_2_CA.pem Adding debian:Trustwave_Global_ECC_P384_Certification_Authority.pem Adding debian:Buypass_Class_3_Root_CA.pem Adding debian:TeliaSonera_Root_CA_v1.pem Adding debian:Certum_Trusted_Network_CA_2.pem Adding debian:Certigna_Root_CA.pem Adding debian:Buypass_Class_2_Root_CA.pem Adding debian:T-TeleSec_GlobalRoot_Class_3.pem Adding debian:USERTrust_RSA_Certification_Authority.pem Adding debian:GTS_Root_R3.pem Adding debian:IdenTrust_Commercial_Root_CA_1.pem Adding debian:Secure_Global_CA.pem Adding debian:SecureSign_RootCA11.pem Adding debian:emSign_Root_CA_-_C1.pem Adding debian:Staat_der_Nederlanden_EV_Root_CA.pem Adding debian:NAVER_Global_Root_Certification_Authority.pem Adding debian:Amazon_Root_CA_4.pem Adding debian:OISTE_WISeKey_Global_Root_GC_CA.pem Adding debian:COMODO_RSA_Certification_Authority.pem Adding debian:GlobalSign_ECC_Root_CA_-_R4.pem Adding debian:GTS_Root_R4.pem Adding debian:QuoVadis_Root_CA_2.pem Adding debian:VeriSign_Universal_Root_Certification_Authority.pem Adding debian:SSL.com_EV_Root_Certification_Authority_ECC.pem Adding debian:SSL.com_EV_Root_Certification_Authority_RSA_R2.pem Adding debian:SZAFIR_ROOT_CA2.pem Adding debian:Microsec_e-Szigno_Root_CA_2009.pem Adding debian:COMODO_ECC_Certification_Authority.pem Adding debian:Cybertrust_Global_Root.pem Adding debian:certSIGN_ROOT_CA.pem Adding debian:Amazon_Root_CA_3.pem Adding debian:GTS_Root_R1.pem Adding debian:USERTrust_ECC_Certification_Authority.pem Adding debian:Amazon_Root_CA_2.pem Adding debian:XRamp_Global_CA_Root.pem Adding debian:GDCA_TrustAUTH_R5_ROOT.pem Adding debian:IdenTrust_Public_Sector_Root_CA_1.pem Adding debian:QuoVadis_Root_CA_2_G3.pem Adding debian:GeoTrust_Primary_Certification_Authority_-_G2.pem Adding debian:SwissSign_Gold_CA_-_G2.pem Adding debian:Security_Communication_RootCA2.pem Adding debian:Sonera_Class_2_Root_CA.pem Adding debian:DigiCert_Trusted_Root_G4.pem Adding debian:GlobalSign_Root_CA_-_R2.pem Adding debian:Chambers_of_Commerce_Root_-_2008.pem Adding debian:TrustCor_RootCert_CA-2.pem Adding debian:AffirmTrust_Premium_ECC.pem Adding debian:Go_Daddy_Root_Certificate_Authority_-_G2.pem Adding debian:SSL.com_Root_Certification_Authority_RSA.pem Adding debian:Entrust_Root_Certification_Authority_-_EC1.pem Adding debian:GlobalSign_Root_CA.pem Adding debian:emSign_Root_CA_-_G1.pem Adding debian:ePKI_Root_Certification_Authority.pem Adding debian:UCA_Global_G2_Root.pem Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2011.pem Adding debian:emSign_ECC_Root_CA_-_G3.pem Adding debian:Comodo_AAA_Services_root.pem Adding debian:certSIGN_Root_CA_G2.pem Adding debian:Trustwave_Global_ECC_P256_Certification_Authority.pem Adding debian:DigiCert_Assured_ID_Root_CA.pem Adding debian:DigiCert_High_Assurance_EV_Root_CA.pem Adding debian:Network_Solutions_Certificate_Authority.pem Adding debian:e-Szigno_Root_CA_2017.pem Adding debian:QuoVadis_Root_CA.pem Adding debian:TrustCor_ECA-1.pem Adding debian:CFCA_EV_ROOT.pem Adding debian:Trustis_FPS_Root_CA.pem Adding debian:E-Tugra_Certification_Authority.pem Adding debian:DigiCert_Assured_ID_Root_G2.pem Adding debian:TWCA_Root_Certification_Authority.pem Adding debian:Starfield_Services_Root_Certificate_Authority_-_G2.pem Adding debian:Atos_TrustedRoot_2011.pem Adding debian:Autoridad_de_Certificacion_Firmaprofesional_CIF_A62634068.pem Adding debian:GTS_Root_R2.pem Adding debian:Hellenic_Academic_and_Research_Institutions_ECC_RootCA_2015.pem Adding debian:Entrust_Root_Certification_Authority_-_G2.pem Adding debian:T-TeleSec_GlobalRoot_Class_2.pem Adding debian:SecureTrust_CA.pem Adding debian:GlobalSign_Root_CA_-_R3.pem Adding debian:Trustwave_Global_Certification_Authority.pem Adding debian:Entrust.net_Premium_2048_Secure_Server_CA.pem Adding debian:GlobalSign_ECC_Root_CA_-_R5.pem Adding debian:QuoVadis_Root_CA_1_G3.pem Adding debian:AffirmTrust_Premium.pem Adding debian:Hongkong_Post_Root_CA_3.pem Adding debian:GlobalSign_Root_CA_-_R6.pem Adding debian:DigiCert_Assured_ID_Root_G3.pem Adding debian:TrustCor_RootCert_CA-1.pem Adding debian:SSL.com_Root_Certification_Authority_ECC.pem Adding debian:COMODO_Certification_Authority.pem Adding debian:Starfield_Root_Certificate_Authority_-_G2.pem Adding debian:Staat_der_Nederlanden_Root_CA_-_G3.pem Adding debian:Hellenic_Academic_and_Research_Institutions_RootCA_2015.pem Adding debian:Security_Communication_Root_CA.pem Adding debian:AffirmTrust_Commercial.pem Adding debian:Global_Chambersign_Root_-_2008.pem Adding debian:QuoVadis_Root_CA_3_G3.pem Adding debian:Actalis_Authentication_Root_CA.pem Adding debian:Entrust_Root_Certification_Authority_-_G4.pem Adding debian:AffirmTrust_Networking.pem Adding debian:DigiCert_Global_Root_G2.pem Adding debian:Izenpe.com.pem Adding debian:SwissSign_Silver_CA_-_G2.pem Adding debian:Hongkong_Post_Root_CA_1.pem Adding debian:TUBITAK_Kamu_SM_SSL_Kok_Sertifikasi_-_Surum_1.pem Adding debian:CA_Disig_Root_R2.pem Adding debian:Microsoft_ECC_Root_Certificate_Authority_2017.pem Adding debian:D-TRUST_Root_Class_3_CA_2_EV_2009.pem Adding debian:DigiCert_Global_Root_CA.pem Adding debian:emSign_ECC_Root_CA_-_C3.pem Adding debian:ACCVRAIZ1.pem Adding debian:Entrust_Root_Certification_Authority.pem Adding debian:Amazon_Root_CA_1.pem Adding debian:EC-ACC.pem Adding debian:AC_RAIZ_FNMT-RCM.pem Adding debian:Certum_Trusted_Network_CA.pem Adding debian:Certigna.pem Adding debian:OISTE_WISeKey_Global_Root_GB_CA.pem Adding debian:NetLock_Arany_=Class_Gold=_Főtanúsítvány.pem Adding debian:ISRG_Root_X1.pem Adding debian:UCA_Extended_Validation_Root.pem Adding debian:TWCA_Global_Root_CA.pem Adding debian:D-TRUST_Root_Class_3_CA_2_2009.pem Adding debian:DigiCert_Global_Root_G3.pem done. Setting up default-jre-headless (2:1.11-72) ... Processing triggers for libc-bin (2.31-0ubuntu9.2) ... Processing triggers for ca-certificates (20210119~20.04.2) ... Updating certificates in /etc/ssl/certs... 0 added, 0 removed; done. Running hooks in /etc/ca-certificates/update.d... done. done. Setting up openjdk-11-jre-headless:amd64 (11.0.11+9-0ubuntu2~20.04) ... update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/java to provide /usr/bin/java (java) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/jjs to provide /usr/bin/jjs (jjs) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/keytool to provide /usr/bin/keytool (keytool) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/rmid to provide /usr/bin/rmid (rmid) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/rmiregistry to provide /usr/bin/rmiregistry (rmiregistry) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/pack200 to provide /usr/bin/pack200 (pack200) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/bin/unpack200 to provide /usr/bin/unpack200 (unpack200) in auto mode update-alternatives: using /usr/lib/jvm/java-11-openjdk-amd64/lib/jexec to provide /usr/bin/jexec (jexec) in auto mode './local.pdbg' -> '/opt/cp2k-toolchain/install/arch/local.pdbg' './local.psmp' -> '/opt/cp2k-toolchain/install/arch/local.psmp' './local.sdbg' -> '/opt/cp2k-toolchain/install/arch/local.sdbg' './local.ssmp' -> '/opt/cp2k-toolchain/install/arch/local.ssmp' './local_coverage.pdbg' -> '/opt/cp2k-toolchain/install/arch/local_coverage.pdbg' './local_static.psmp' -> '/opt/cp2k-toolchain/install/arch/local_static.psmp' './local_static.ssmp' -> '/opt/cp2k-toolchain/install/arch/local_static.ssmp' './local_warn.psmp' -> '/opt/cp2k-toolchain/install/arch/local_warn.psmp' Warming cache by trying to compile... done. Removing intermediate container fc2951408ace ---> 16531716fea7 Step 8/9 : COPY ./scripts/ci_entrypoint.sh ./scripts/test_manual.sh ./ ---> 139bedb5cde2 Step 9/9 : CMD ["./ci_entrypoint.sh", "./test_manual.sh"] ---> Running in 281d83e3dd1f Removing intermediate container 281d83e3dd1f ---> 955fd452ff4e Successfully built 955fd452ff4e Successfully tagged gcr.io/cp2k-org-project/img_cp2k-manual-arch-b51:gittree-9ffe536-buildargs-9463269 Pushing image cp2k-manual... done. #################### Running Image cp2k-manual #################### ========== Fetching Git Commit ========== CommitSHA: d61f55c125c3b22ef4add13a11f65676c5c5661a CommitTime: 2021-10-20 11:18:59 +0200 CommitAuthor: Matthias Krack CommitSubject: Adjust tolerances ========== Running Test ========== ========== Compiling CP2K ========== Compiling cp2k... done. ========== Generating Manual ========== CP2K version 9.0 (Development Version) Source code revision git:d61f55c cp2kflags: omp libint fftw3 libxc pexsi elpa parallel mpi3 scalapack cosma quip smm_dnn smm xsmm plumed2 spglib sirius libvori libbqb compiler: GCC version 11.2.0 compiler options: -cpp -I /opt/cp2k-toolchain/install/mpich-3.3.2/include -I /opt/cp2k -toolchain/install/openblas-0.3.10/include -I /opt/cp2k-toolchain/in stall/fftw-3.3.8/include -I /opt/cp2k-toolchain/install/libint-v2.6. 0-cp2k-lmax-5/include -I /opt/cp2k-toolchain/install/libxc-5.1.6/inc lude -I /opt/cp2k-toolchain/install/libxsmm-1.16.2/include -I /opt/c p2k-toolchain/install/COSMA-2.5.0/include -I /opt/cp2k-toolchain/ins tall/elpa-2021.05.001/cpu/include/elpa_openmp-2021.05.001/modules -I /opt/cp2k-toolchain/install/elpa-2021.05.001/cpu/include/elpa_openm p-2021.05.001/elpa -I /opt/cp2k-toolchain/install/scotch-6.0.0/inclu de -I /opt/cp2k-toolchain/install/superlu_dist-6.1.0/include -I /opt /cp2k-toolchain/install/pexsi-1.2.0/include -I /opt/cp2k-toolchain/i nstall/quip-b4336484fb65b0e73211a8f920ae4361c7c353fd/include -I /opt /cp2k-toolchain/install/gsl-2.6/include -I /opt/cp2k-toolchain/insta ll/hdf5-1.12.0/include -I /opt/cp2k-toolchain/install/libvdwxc-0.4.0 /include -I /opt/cp2k-toolchain/install/spglib-1.16.0/include -I /op t/cp2k-toolchain/install/SpFFT-1.0.3/include -I /opt/cp2k-toolchain/ install/SpLA-1.4.0/include -I /opt/cp2k-toolchain/install/sirius-7.2 .7/include -I /workspace/cp2k/src/start/ -I /workspace/cp2k/obj/loca l/psmp/exts/dbcsr -I /opt/cp2k-toolchain/install/mpich-3.3.2/include -I /opt/cp2k-toolchain/install/mpich-3.3.2/include -imultiarch x86_ 64-linux-gnu -D_REENTRANT -D __LIBXSMM -D __parallel -D __FFTW3 -D _ _LIBINT -D __LIBXC -D __HAS_smm_dnn -D __SCALAPACK -D __COSMA -D __E LPA -D __LIBPEXSI -D __QUIP -D __GSL -D __PLUMED2 -D __HDF5 -D __LIB VDWXC -D __SPGLIB -D __LIBVORI -D __SPFFT -D __SPLA -D __SIRIUS -D _ _COMPILE_ARCH="local" -D __COMPILE_DATE="Wed Oct 20 11:16:46 UTC 202 1" -D __COMPILE_HOST="9152b50246b1" -D __COMPILE_REVISION="git:d61f5 5c" -D __DATA_DIR="/workspace/cp2k/data" -D __SHORT_FILE__="start/cp 2k.F" -march=skylake-avx512 -mmmx -mpopcnt -msse -msse2 -msse3 -msss e3 -msse4.1 -msse4.2 -mavx -mavx2 -mno-sse4a -mno-fma4 -mno-xop -mfm a -mavx512f -mbmi -mbmi2 -maes -mpclmul -mavx512vl -mavx512bw -mavx5 12dq -mavx512cd -mno-avx512er -mno-avx512pf -mno-avx512vbmi -mno-avx 512ifma -mno-avx5124vnniw -mno-avx5124fmaps -mno-avx512vpopcntdq -mn o-avx512vbmi2 -mno-gfni -mno-vpclmulqdq -mno-avx512vnni -mno-avx512b italg -mno-avx512bf16 -mno-avx512vp2intersect -mno-3dnow -madx -mabm -mno-cldemote -mclflushopt -mclwb -mno-clzero -mcx16 -mno-enqcmd -m f16c -mfsgsbase -mfxsr -mhle -msahf -mno-lwp -mlzcnt -mmovbe -mno-mo vdir64b -mno-movdiri -mno-mwaitx -mno-pconfig -mno-pku -mno-prefetch wt1 -mprfchw -mno-ptwrite -mno-rdpid -mrdrnd -mrdseed -mrtm -mno-ser ialize -mno-sgx -mno-sha -mno-shstk -mno-tbm -mno-tsxldtrk -mno-vaes -mno-waitpkg -mno-wbnoinvd -mxsave -mxsavec -mxsaveopt -mxsaves -mn o-amx-tile -mno-amx-int8 -mno-amx-bf16 -mno-uintr -mno-hreset -mno-k l -mno-widekl -mno-avxvnni --param=l1-cache-size=32 --param=l1-cache -line-size=64 --param=l2-cache-size=39424 -mtune=skylake-avx512 -g - g -O2 -O3 -Werror=aliasing -Werror=ampersand -Werror=c-binding-type -Werror=intrinsic-shadow -Werror=intrinsics-std -Werror=line-truncat ion -Werror=tabs -Werror=target-lifetime -Werror=underflow -Werror=u nused-but-set-variable -Werror=unused-variable -Werror=unused-dummy- argument -Werror=conversion -Werror=zerotrip -Wno-maybe-uninitialize d -Wuninitialized -Wuse-without-only -std=f2008 -fallow-argument-mis match -fno-omit-frame-pointer -funroll-loops -fopenmp -fbacktrace -f free-form -fimplicit-none -fpre-include=/usr/include/finclude/math-v ector-fortran.h Error on line 403426 column 19 of cp2k_input.xml: SXXP0003: Error reported by XML parser: An invalid XML character (Unicode: 0x10) was found in the element content of the document. org.xml.sax.SAXParseException; systemId: file:/workspace/artifacts/manual/./cp2k_input.xml; lineNumber: 403426; columnNumber: 19; An invalid XML character (Unicode: 0x10) was found in the element content of the document. Summary: Something is wrong. Status: FAILED Uploading artifacts... done EndDate: 2021-10-20 11:17:12+00:00