62676.omex
title: Markovian model for single-channel recordings of Ik_1 in ventricular cells (Matsuoka et al 2003)
abstract: The interaction between many currents in a cardiac ventricular model are examined in this paper. One of the main contributions come from a current called IK_1. An XPP version of this model was supplied by Hsieng-Jung Lai, Jiun-Shian Wu, Sheng-Nan Wu, Ruey J. Sung, Han-Dong Chang. Please see paper and model for more and details.
description: This is a readme file for the models associated with the paper: Matsuoka S, Sarai N, Kuratomi S, Ono K, Noma A., Role of individual ionic current systems in ventricular cells hypothesized by a model study. Jpn J Physiol. 2003 Apr;53(2):105-23. [Abstract] Individual ion channels or exchangers are described with a common set of equations for both the sinoatrial node pacemaker and ventricular cells. New experimental data are included, such as the new kinetics of the inward rectifier K+ channel, delayed rectifier K+ channel, and sustained inward current. The gating model of Shirokov et al. (J Gen Physiol 102: 1005-1030, 1993) is used for both the fast Na+ and L-type Ca2+ channels. When combined with a contraction model (Negroni and Lascano: J Mol Cell Cardiol 28: 915-929, 1996), the experimental staircase phenomenon of contraction is reconstructed. The modulation of the action potential by varying the external Ca2+ and K+ concentrations is well simulated. The conductance of I(CaL) dominates membrane conductance during the action potential so that an artificial increase of I(to), I(Kr), I(Ks), or I(KATP) magnifies I(CaL) amplitude. Repolarizing current is provided sequentially by I(Ks), I(Kr), and I(K1). Depression of ATP production results in the shortening of action potential through the activation of I(KATP). The ratio of Ca2+ released from SR over Ca2+ entering via I(CaL) (Ca2+ gain = approximately 15) in excitation-contraction coupling well agrees with the experimental data. The model serves as a predictive tool in generating testable hypotheses. ------------------------------------------------------------------------------- The state diagram for this Markovian model (model.jpg): ![state diagram]([binary]) from table 5 (see eqns 4, 5 also) in the paper. Model parameters are available in the web site: <http://www.jstage.jst.go.jp/article/jjphysiol/53/2/105/_pdf> Parts of the results were shown in figure 9C of the paper (IVcurve.jpg): ![IV curve]([binary]) Current-vol…
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created: 2006-01-20
modified: 2018-02-26

Channel/Receptor
identifier: http://modeldb.science/ModelList

I K
identifier: http://modeldb.science/ModelList

Ion Channel Kinetics
identifier: http://modeldb.science/ModelList

Heart disease
identifier: http://modeldb.science/ModelList

Cardiac pacemaking
identifier: http://modeldb.science/ModelList

Markov-type model
identifier: http://modeldb.science/ModelList

Sheng-Nan Wu

Han-Dong Chang

Jiun-Shian Wu

Ruey J Sung

Hsing-Jung Lai

Sense Lab at Yale University
identifier: https://senselab.med.yale.edu/
account name: https://senselab.med.yale.edu/

Jonathan R. Karr
identifier: http://identifiers.org/orcid:0000-0002-2605-5080
account name: https://orcid.org/0000-0002-2605-5080

modeldb:62676
identifier: https://identifiers.org/modeldb:62676

00015
identifier: http://identifiers.org/doi:10.2170/jjphysiol.53.105
label: Satoshi Matsuoka, Nobuaki Sarai, Shinobu Kuratomi, Kyoichi Ono & Akinori Noma. Role of individual ionic current systems in ventricular cells hypothesized by a model study. The Japanese Journal of Physiology 53, 2: 105-123 (2003).