LEFT 0 conversion RPE Ru5P STOICHIOMETRY
type: Stoichiometry
physical entity: Ru5P
stoichiometric coefficient: 1.0

P6G
type: PhysicalEntity
member physical entity: P6G
cellular location: cell

CHEBI:16897
type: UnificationXref
id: CHEBI:16897
db: ChEBI

RPE
type: BiochemicalReaction
participant stoichiometry: RIGHT 0 conversion RPE X5P STOICHIOMETRY
participant stoichiometry: LEFT 0 conversion RPE Ru5P STOICHIOMETRY
xref: http://identifiers.org/ec-code/5.1.3.1
right: X5P
left: Ru5P

RIGHT 0 conversion TAL F6P STOICHIOMETRY
type: Stoichiometry
physical entity: F6P
stoichiometric coefficient: 1.0

LEFT 1 conversion GND NADP STOICHIOMETRY
type: Stoichiometry
physical entity: NADP
stoichiometric coefficient: 1.0

R5P
type: PhysicalEntity
member physical entity: R5P
cellular location: cell

TKL1
type: Protein
xref: P23254
xref: S000006278
xref: sce:YPR074C

R5P
type: PhysicalEntity
member physical entity: R5P
cellular location: cell

C00661
type: UnificationXref
id: C00661
db: KEGG Compound

LEFT 0 conversion SOL G6L STOICHIOMETRY
type: Stoichiometry
physical entity: G6L
stoichiometric coefficient: 1.0

X5P
type: PhysicalEntity
member physical entity: X5P
cellular location: cell

CHEBI:57737
type: UnificationXref
id: CHEBI:57737
db: ChEBI

sce:YPR074C
type: UnificationXref
id: sce:YPR074C

CHEBI:58027
type: UnificationXref
id: CHEBI:58027
db: ChEBI

Ru5P
type: PhysicalEntity
member physical entity: Ru5P
cellular location: cell

S000003275
type: UnificationXref
id: S000003275

http://identifiers.org/taxonomy/4932
type: UnificationXref
id: 4932
db: Taxonomy

F6P
type: PhysicalEntity
member physical entity: F6P
cellular location: cell

G6P
type: PhysicalEntity
member physical entity: G6P
cellular location: cell

http://identifiers.org/ec-code/2.2.1.2
type: UnificationXref
id: 2.2.1.2
db: Enzyme Nomenclature

http://identifiers.org/ec-code/2.2.1.1
type: UnificationXref
id: 2.2.1.1
db: Enzyme Nomenclature

S7P
type: PhysicalEntity
member physical entity: S7P
cellular location: cell

NADPH
type: PhysicalEntity
member physical entity: NADPH
cellular location: cell

LEFT 1 conversion TKL E4P E4P STOICHIOMETRY
type: Stoichiometry
physical entity: E4P
stoichiometric coefficient: 1.0

GAP
type: PhysicalEntity
member physical entity: GAP
cellular location: cell

RIGHT 0 conversion TKL R5P GAP STOICHIOMETRY
type: Stoichiometry
physical entity: GAP
stoichiometric coefficient: 1.0

P53228
type: UnificationXref
id: P53228
db: UniProt Knowledgebase

GO:0006098
type: UnificationXref
id: GO:0006098
db: Gene Ontology

Ru5P
type: SmallMolecule
xref: CHEBI:58121
xref: C00199

LEFT 0 conversion R5P sink R5P STOICHIOMETRY
type: Stoichiometry
physical entity: R5P
stoichiometric coefficient: 1.0

RIGHT 1 conversion TKL E4P F6P STOICHIOMETRY
type: Stoichiometry
physical entity: F6P
stoichiometric coefficient: 1.0

sce:YHR163W
type: UnificationXref
id: sce:YHR163W

ZWF1
type: Protein
xref: S000005185
xref: P11412
xref: sce:YNL241C

P38720
type: UnificationXref
id: P38720
db: UniProt Knowledgebase

E4P sink
type: BiochemicalReaction
participant stoichiometry: LEFT 0 conversion E4P sink E4P STOICHIOMETRY
left: E4P

S7P
type: PhysicalEntity
member physical entity: S7P
cellular location: cell

R5P
type: SmallMolecule
xref: C03736
xref: CHEBI:18189

S7P
type: SmallMolecule
xref: C05382
xref: CHEBI:57483

P53319
type: UnificationXref
id: P53319
db: UniProt Knowledgebase

peerj.preprints.146v2
type: PublicationXref
id: 10.7287/peerj.preprints.146v2
db: DOI

GND
type: BiochemicalReaction
participant stoichiometry: LEFT 0 conversion GND P6G STOICHIOMETRY
participant stoichiometry: LEFT 1 conversion GND NADP STOICHIOMETRY
participant stoichiometry: RIGHT 0 conversion GND Ru5P STOICHIOMETRY
participant stoichiometry: RIGHT 1 conversion GND NADPH STOICHIOMETRY
xref: http://identifiers.org/ec-code/1.1.1.44
right: Ru5P
right: NADPH
left: P6G
left: NADP

S000001226
type: UnificationXref
id: S000001226

C00199
type: UnificationXref
id: C00199
db: KEGG Compound

MAMO_0000046
type: UnificationXref
id: MAMO_0000046
db: Mathematical Modelling Ontology

NQM1
type: Protein
xref: P53228
xref: sce:YGR043C
xref: S000003275

LEFT 1 conversion ZWF NADP STOICHIOMETRY
type: Stoichiometry
physical entity: NADP
stoichiometric coefficient: 1.0

sce:YGR043C
type: UnificationXref
id: sce:YGR043C

CHEBI:18189
type: UnificationXref
id: CHEBI:18189
db: ChEBI

E4P
type: PhysicalEntity
member physical entity: E4P
cellular location: cell

TAL1
type: Protein
xref: P15019
xref: sce:YLR354C
xref: S000004346

LEFT 0 conversion TKL E4P X5P STOICHIOMETRY
type: Stoichiometry
physical entity: X5P
stoichiometric coefficient: 1.0

GAP
type: SmallMolecule
xref: CHEBI:58027
xref: C00661

NADP
type: PhysicalEntity
member physical entity: NADP
cellular location: cell

MODEL1311290000
type: Pathway
pathway component: ZWF
pathway component: GND
pathway component: RKI
pathway component: SOL
pathway component: R5P sink
pathway component: TAL
pathway component: E4P sink
pathway component: TKL (E4P:F6P)
pathway component: TKL (R5P:S7P)
pathway component: NADPH oxidase
pathway component: RPE
xref: rn00030
xref: MODEL1311290000
xref: peerj.preprints.146v2
xref: GO:0006098
xref: BIOMD0000000502
xref: MAMO_0000046
organism: biosource 1
comment: This BioPAX Level3 file was automatically generated on 23-Jun-2017 by SBML2BioPAX-3.1, BioModels.net, EMBL-EBI.
comment: The original model, 'MODEL1311290000', was published in BioModels Database (http://www.ebi.ac.uk/biomodels/).
data source: BioModels Database

NADPH
type: SmallMolecule
xref: C00005
xref: CHEBI:57783

X5P
type: PhysicalEntity
member physical entity: X5P
cellular location: cell

S000001206
type: UnificationXref
id: S000001206

RIGHT 0 conversion TKL E4P GAP STOICHIOMETRY
type: Stoichiometry
physical entity: GAP
stoichiometric coefficient: 1.0

C00092
type: UnificationXref
id: C00092
db: KEGG Compound

P23254
type: UnificationXref
id: P23254
db: UniProt Knowledgebase

RIGHT 0 conversion NADPH oxidase NADP STOICHIOMETRY
type: Stoichiometry
physical entity: NADP
stoichiometric coefficient: 1.0

TKL (R5P:S7P)
type: BiochemicalReaction
participant stoichiometry: LEFT 1 conversion TKL R5P R5P STOICHIOMETRY
participant stoichiometry: RIGHT 0 conversion TKL R5P GAP STOICHIOMETRY
participant stoichiometry: LEFT 0 conversion TKL R5P X5P STOICHIOMETRY
participant stoichiometry: RIGHT 1 conversion TKL R5P S7P STOICHIOMETRY
xref: http://identifiers.org/ec-code/2.2.1.1
right: S7P
right: GAP
left: X5P
left: R5P

P38858
type: UnificationXref
id: P38858
db: UniProt Knowledgebase

SOL3
type: Protein
xref: S000001206
xref: P38858
xref: sce:YHR163W

Ru5P
type: PhysicalEntity
member physical entity: Ru5P
cellular location: cell

CHEBI:58759
type: UnificationXref
id: CHEBI:58759
db: ChEBI

NADP
type: PhysicalEntity
member physical entity: NADP
cellular location: cell

CHEBI:57783
type: UnificationXref
id: CHEBI:57783
db: ChEBI

GAP
type: PhysicalEntity
member physical entity: GAP
cellular location: cell

sce:YHR183W
type: UnificationXref
id: sce:YHR183W

C00085
type: UnificationXref
id: C00085
db: KEGG Compound

http://identifiers.org/ec-code/5.1.3.1
type: UnificationXref
id: 5.1.3.1
db: Enzyme Nomenclature

G6L
type: PhysicalEntity
member physical entity: G6L
cellular location: cell

RIGHT 1 conversion GND NADPH STOICHIOMETRY
type: Stoichiometry
physical entity: NADPH
stoichiometric coefficient: 1.0

RIGHT 1 conversion ZWF NADPH STOICHIOMETRY
type: Stoichiometry
physical entity: NADPH
stoichiometric coefficient: 1.0

C01236
type: UnificationXref
id: C01236
db: KEGG Compound

ZWF
type: BiochemicalReaction
participant stoichiometry: LEFT 1 conversion ZWF NADP STOICHIOMETRY
participant stoichiometry: RIGHT 0 conversion ZWF G6L STOICHIOMETRY
participant stoichiometry: LEFT 0 conversion ZWF G6P STOICHIOMETRY
participant stoichiometry: RIGHT 1 conversion ZWF NADPH STOICHIOMETRY
xref: http://identifiers.org/ec-code/1.1.1.49
right: NADPH
right: G6L
left: G6P
left: NADP

sce:YOR095C
type: UnificationXref
id: sce:YOR095C

RIGHT 1 conversion TAL E4P STOICHIOMETRY
type: Stoichiometry
physical entity: E4P
stoichiometric coefficient: 1.0

rn00030
type: UnificationXref
id: rn00030
db: KEGG Pathway

X5P
type: SmallMolecule
xref: CHEBI:57737
xref: C00231

X5P
type: PhysicalEntity
member physical entity: X5P
cellular location: cell

P6G
type: SmallMolecule
xref: C00345
xref: CHEBI:58759

S000005185
type: UnificationXref
id: S000005185

GO:0005737
type: UnificationXref
id: GO:0005737
db: Gene Ontology

P15019
type: UnificationXref
id: P15019
db: UniProt Knowledgebase

sce:YNL241C
type: UnificationXref
id: sce:YNL241C

RKI1
type: Protein
xref: sce:YOR095C
xref: Q12189
xref: S000005621

CHEBI:57483
type: UnificationXref
id: CHEBI:57483
db: ChEBI

S000005621
type: UnificationXref
id: S000005621

S000006278
type: UnificationXref
id: S000006278

NADP
type: PhysicalEntity
member physical entity: NADP
cellular location: cell

NADPH
type: PhysicalEntity
member physical entity: NADPH
cellular location: cell

RIGHT 0 conversion RKI R5P STOICHIOMETRY
type: Stoichiometry
physical entity: R5P
stoichiometric coefficient: 1.0

RIGHT 0 conversion SOL P6G STOICHIOMETRY
type: Stoichiometry
physical entity: P6G
stoichiometric coefficient: 1.0

CHEBI:57579
type: UnificationXref
id: CHEBI:57579
db: ChEBI

http://identifiers.org/ec-code/5.3.1.6
type: UnificationXref
id: 5.3.1.6
db: Enzyme Nomenclature

R5P sink
type: BiochemicalReaction
participant stoichiometry: LEFT 0 conversion R5P sink R5P STOICHIOMETRY
left: R5P

LEFT 1 conversion TAL S7P STOICHIOMETRY
type: Stoichiometry
physical entity: S7P
stoichiometric coefficient: 1.0

cell
type: CellularLocationVocabulary
xref: GO:0005737

LEFT 0 conversion TAL GAP STOICHIOMETRY
type: Stoichiometry
physical entity: GAP
stoichiometric coefficient: 1.0

NADP
type: SmallMolecule
xref: CHEBI:58349
xref: C00006

G6L
type: SmallMolecule
xref: CHEBI:57955
xref: C01236

C00279
type: UnificationXref
id: C00279
db: KEGG Compound

G6P
type: SmallMolecule
xref: C00092
xref: CHEBI:14314

Ru5P
type: PhysicalEntity
member physical entity: Ru5P
cellular location: cell

RPE1
type: Protein
xref: S000003657
xref: sce:YJL121C
xref: P46969

LEFT 0 conversion E4P sink E4P STOICHIOMETRY
type: Stoichiometry
physical entity: E4P
stoichiometric coefficient: 1.0

S000003657
type: UnificationXref
id: S000003657

sce:YJL121C
type: UnificationXref
id: sce:YJL121C

RIGHT 0 conversion GND Ru5P STOICHIOMETRY
type: Stoichiometry
physical entity: Ru5P
stoichiometric coefficient: 1.0

NADPH
type: PhysicalEntity
member physical entity: NADPH
cellular location: cell

F6P
type: PhysicalEntity
member physical entity: F6P
cellular location: cell

http://identifiers.org/ec-code/3.1.1.31
type: UnificationXref
id: 3.1.1.31
db: Enzyme Nomenclature

E4P
type: PhysicalEntity
member physical entity: E4P
cellular location: cell

CHEBI:57955
type: UnificationXref
id: CHEBI:57955
db: ChEBI

C00345
type: UnificationXref
id: C00345
db: KEGG Compound

LEFT 0 conversion GND P6G STOICHIOMETRY
type: Stoichiometry
physical entity: P6G
stoichiometric coefficient: 1.0

C03736
type: UnificationXref
id: C03736
db: KEGG Compound

LEFT 0 conversion NADPH oxidase NADPH STOICHIOMETRY
type: Stoichiometry
physical entity: NADPH
stoichiometric coefficient: 1.0

RKI
type: BiochemicalReaction
participant stoichiometry: LEFT 0 conversion RKI Ru5P STOICHIOMETRY
participant stoichiometry: RIGHT 0 conversion RKI R5P STOICHIOMETRY
xref: http://identifiers.org/ec-code/5.3.1.6
right: R5P
left: Ru5P

CHEBI:58121
type: UnificationXref
id: CHEBI:58121
db: ChEBI

Q12189
type: UnificationXref
id: Q12189
db: UniProt Knowledgebase

S000004346
type: UnificationXref
id: S000004346

P6G
type: PhysicalEntity
member physical entity: P6G
cellular location: cell

GAP
type: PhysicalEntity
member physical entity: GAP
cellular location: cell

CHEBI:14314
type: UnificationXref
id: CHEBI:14314
db: ChEBI

sce:YGR256W
type: UnificationXref
id: sce:YGR256W

RIGHT 0 conversion RPE X5P STOICHIOMETRY
type: Stoichiometry
physical entity: X5P
stoichiometric coefficient: 1.0

C00231
type: UnificationXref
id: C00231
db: KEGG Compound

BIOMD0000000502
type: UnificationXref
id: BIOMD0000000502
db: BioModels Database

E4P
type: SmallMolecule
xref: C00279
xref: CHEBI:16897

F6P
type: SmallMolecule
xref: CHEBI:57579
xref: C00085

P11412
type: UnificationXref
id: P11412
db: UniProt Knowledgebase

LEFT 0 conversion RKI Ru5P STOICHIOMETRY
type: Stoichiometry
physical entity: Ru5P
stoichiometric coefficient: 1.0

S000003488
type: UnificationXref
id: S000003488

R5P
type: PhysicalEntity
member physical entity: R5P
cellular location: cell

MODEL1311290000
type: UnificationXref
id: MODEL1311290000
db: BioModels Database

GND2
type: Protein
xref: P53319
xref: sce:YGR256W
xref: S000003488

GND1
type: Protein
xref: P38720
xref: S000001226
xref: sce:YHR183W

C00005
type: UnificationXref
id: C00005
db: KEGG Compound

CHEBI:58349
type: UnificationXref
id: CHEBI:58349
db: ChEBI

C00006
type: UnificationXref
id: C00006
db: KEGG Compound

SOL
type: BiochemicalReaction
participant stoichiometry: LEFT 0 conversion SOL G6L STOICHIOMETRY
participant stoichiometry: RIGHT 0 conversion SOL P6G STOICHIOMETRY
xref: http://identifiers.org/ec-code/3.1.1.31
right: P6G
left: G6L

http://identifiers.org/ec-code/1.1.1.49
type: UnificationXref
id: 1.1.1.49
db: Enzyme Nomenclature

P46969
type: UnificationXref
id: P46969
db: UniProt Knowledgebase

RIGHT 1 conversion TKL R5P S7P STOICHIOMETRY
type: Stoichiometry
physical entity: S7P
stoichiometric coefficient: 1.0

C05382
type: UnificationXref
id: C05382
db: KEGG Compound

sce:YLR354C
type: UnificationXref
id: sce:YLR354C

TAL
type: BiochemicalReaction
participant stoichiometry: LEFT 1 conversion TAL S7P STOICHIOMETRY
participant stoichiometry: RIGHT 1 conversion TAL E4P STOICHIOMETRY
participant stoichiometry: LEFT 0 conversion TAL GAP STOICHIOMETRY
participant stoichiometry: RIGHT 0 conversion TAL F6P STOICHIOMETRY
xref: http://identifiers.org/ec-code/2.2.1.2
right: F6P
right: E4P
left: GAP
left: S7P

http://identifiers.org/ec-code/1.1.1.44
type: UnificationXref
id: 1.1.1.44
db: Enzyme Nomenclature

NADPH oxidase
type: BiochemicalReaction
participant stoichiometry: LEFT 0 conversion NADPH oxidase NADPH STOICHIOMETRY
participant stoichiometry: RIGHT 0 conversion NADPH oxidase NADP STOICHIOMETRY
right: NADP
left: NADPH

BioModels Database
type: Provenance
xref: BIOMD0000000502

LEFT 1 conversion TKL R5P R5P STOICHIOMETRY
type: Stoichiometry
physical entity: R5P
stoichiometric coefficient: 1.0

TKL (E4P:F6P)
type: BiochemicalReaction
participant stoichiometry: LEFT 1 conversion TKL E4P E4P STOICHIOMETRY
participant stoichiometry: RIGHT 0 conversion TKL E4P GAP STOICHIOMETRY
participant stoichiometry: LEFT 0 conversion TKL E4P X5P STOICHIOMETRY
participant stoichiometry: RIGHT 1 conversion TKL E4P F6P STOICHIOMETRY
xref: http://identifiers.org/ec-code/2.2.1.1
right: F6P
right: GAP
left: X5P
left: E4P

LEFT 0 conversion TKL R5P X5P STOICHIOMETRY
type: Stoichiometry
physical entity: X5P
stoichiometric coefficient: 1.0

BioModels Database
type: Provenance
xref: MODEL1311290000

G6L
type: PhysicalEntity
member physical entity: G6L
cellular location: cell

E4P
type: PhysicalEntity
member physical entity: E4P
cellular location: cell

RIGHT 0 conversion ZWF G6L STOICHIOMETRY
type: Stoichiometry
physical entity: G6L
stoichiometric coefficient: 1.0

LEFT 0 conversion ZWF G6P STOICHIOMETRY
type: Stoichiometry
physical entity: G6P
stoichiometric coefficient: 1.0