FITC_Dextran_single_compartment_model
type: Complex
xref: CHEBI:37926
xref: CHEBI:52071

Pyranine_three_compartment_model_compartment_1
type: SmallMolecule
xref: CHEBI:52083

Pyranine_three_compartment_model_compartment_3
type: SmallMolecule
xref: CHEBI:52083

Pyranine_three_compartment_model_compartment_2
type: SmallMolecule
xref: CHEBI:52083

FITC_Dextran_efflux_rate
type: ComplexAssembly
participant stoichiometry: LEFT 0 conversion FITC Dextran efflux rate FITC Dextran three compartment model compartment 3 STOICHIOMETRY
xref: GO:0140352
spontaneous: true
left: FITC_Dextran_three_compartment_model_compartment_3
conversion direction: RIGHT_TO_LEFT

Aubry1995 Multi compartment model of fluid phase endocytosis kinetics in Dictyostelium discoideum
type: Pathway
pathway component: Pyranine_efflux_rate
pathway component: Pyranine_transfer_between_endo_lysosomal_compartments_1_and_2
pathway component: FITC_Dextran_efflux_rate
pathway component: Pyranine_transfer_between_endo_lysosomal_compartments_2_and_3
pathway component: FITC_Dextran_influx_rate
pathway component: FITC_Dextran_transfer_between_endo_lysosomal_compartments_1_and_2
pathway component: FITC_Dextran_transfer_between_endo_lysosomal_compartments_2_and_3
pathway component: Pyranine_influx_rate
xref: http://identifiers.org/doi/10.1007/BF00713556
xref: CHEBI:37926
xref: MODEL2102090001
xref: CHEBI:52083
xref: BIOMD0000000986
xref: MAMO_0000046
xref: GO:0006897
organism: biosource 1
comment: This BioPAX Level3 file was automatically generated on Apr 8, 2022 by SBML2BioPAX-3.1, BioModels.net, EMBL-EBI.
comment: The original model, 'Aubry1995___Multi_compartment_model_of_fluid_phase_endocytosis_kinetics_in_Dictyostelium_discoideum', was published in BioModels Database (http://www.ebi.ac.uk/biomodels/).
data source: BioModels Database

GO:0006897
type: UnificationXref
id: GO:0006897
db: Gene Ontology

Pyranine_efflux_rate
type: BiochemicalReaction
participant stoichiometry: LEFT 0 conversion Pyranine efflux rate Pyranine three compartment model compartment 3 STOICHIOMETRY
xref: GO:0140352
left: Pyranine_three_compartment_model_compartment_3

http://identifiers.org/doi/10.1007/BF00713556
type: PublicationXref
id: 10.1007/BF00713556
db: DOI

…
type: Stoichiometry
stoichiometric coefficient: 1.0

FITC_Dextran_transfer_between_endo_lysosomal_compartments_1_and_2
type: BiochemicalReaction
xref: GO:0098927

FITC_Dextran_three_compartment_model_compartment_2
type: PhysicalEntity
member physical entity: FITC_Dextran_three_compartment_model_compartment_2
cellular location: Dictyostelium discoideum AX2

BIOMD0000000986
type: UnificationXref
id: BIOMD0000000986
db: BioModels Database

MAMO_0000046
type: UnificationXref
id: MAMO_0000046
db: Mathematical Modelling Ontology

…
type: Stoichiometry
stoichiometric coefficient: 1.0

FITC_Dextran_three_compartment_model_compartment_3
type: PhysicalEntity
member physical entity: FITC_Dextran_three_compartment_model_compartment_3
cellular location: Dictyostelium discoideum AX2

Dictyostelium discoideum AX2
type: CellularLocationVocabulary
xref: http://identifiers.org/taxonomy/366501

FITC_Dextran_three_compartment_model_compartment_3
type: Complex
xref: CHEBI:37926
xref: CHEBI:52071

FITC_Dextran_three_compartment_model_compartment_1
type: PhysicalEntity
member physical entity: FITC_Dextran_three_compartment_model_compartment_1
cellular location: Dictyostelium discoideum AX2

LEFT 0 conversion FITC Dextran efflux rate FITC Dextran three compartment model compartment 3 STOICHIOMETRY
type: Stoichiometry
physical entity: FITC_Dextran_three_compartment_model_compartment_3
stoichiometric coefficient: 1.0

FITC_Dextran_three_compartment_model_compartment_1
type: PhysicalEntity
member physical entity: FITC_Dextran_three_compartment_model_compartment_1
cellular location: Dictyostelium discoideum AX2

CHEBI:52071
type: UnificationXref
id: CHEBI:52071
db: ChEBI

FITC_Dextran_influx_rate
type: ComplexAssembly
participant stoichiometry: RIGHT 0 conversion FITC Dextran influx rate 0 FITC Dextran three compartment model compartment 1 STOICHIOMETRY
xref: GO:0098657
right: FITC_Dextran_three_compartment_model_compartment_1
spontaneous: true
conversion direction: LEFT_TO_RIGHT

FITC_Dextran_three_compartment_model_compartment_2
type: Complex
xref: CHEBI:37926
xref: CHEBI:52071

FITC_Dextran_three_compartment_model_compartment_1
type: Complex
xref: CHEBI:37926
xref: CHEBI:52071

…
type: Stoichiometry
stoichiometric coefficient: 1.0

LEFT 0 conversion Pyranine efflux rate Pyranine three compartment model compartment 3 STOICHIOMETRY
type: Stoichiometry
physical entity: Pyranine_three_compartment_model_compartment_3
stoichiometric coefficient: 1.0

Pyranine_three_compartment_model_compartment_2
type: PhysicalEntity
member physical entity: Pyranine_three_compartment_model_compartment_2
cellular location: Dictyostelium discoideum AX2

Pyranine_transfer_between_endo_lysosomal_compartments_2_and_3
type: BiochemicalReaction
xref: GO:0098927

GO:0098927
type: UnificationXref
id: GO:0098927
db: Gene Ontology

RIGHT 0 conversion Pyranine influx rate 0 Pyranine three compartment model compartment 1 STOICHIOMETRY
type: Stoichiometry
physical entity: Pyranine_three_compartment_model_compartment_1
stoichiometric coefficient: 1.0

FITC_Dextran_transfer_between_endo_lysosomal_compartments_2_and_3
type: BiochemicalReaction
xref: GO:0098927

Pyranine_three_compartment_model_compartment_1
type: PhysicalEntity
member physical entity: Pyranine_three_compartment_model_compartment_1
cellular location: Dictyostelium discoideum AX2

…
type: Stoichiometry
stoichiometric coefficient: 1.0

Pyranine_influx_rate
type: BiochemicalReaction
participant stoichiometry: RIGHT 0 conversion Pyranine influx rate 0 Pyranine three compartment model compartment 1 STOICHIOMETRY
xref: GO:0098657
right: Pyranine_three_compartment_model_compartment_1

CHEBI:37926
type: UnificationXref
id: CHEBI:37926
db: ChEBI

RIGHT 0 conversion FITC Dextran influx rate 0 FITC Dextran three compartment model compartment 1 STOICHIOMETRY
type: Stoichiometry
physical entity: FITC_Dextran_three_compartment_model_compartment_1
stoichiometric coefficient: 1.0

GO:0098657
type: UnificationXref
id: GO:0098657
db: Gene Ontology

CHEBI:52083
type: UnificationXref
id: CHEBI:52083
db: ChEBI

GO:0140352
type: UnificationXref
id: GO:0140352
db: Gene Ontology

Pyranine_transfer_between_endo_lysosomal_compartments_1_and_2
type: BiochemicalReaction
xref: GO:0098927

…
type: Stoichiometry
stoichiometric coefficient: 1.0

Pyranine_three_compartment_model_compartment_1
type: PhysicalEntity
member physical entity: Pyranine_three_compartment_model_compartment_1
cellular location: Dictyostelium discoideum AX2

FITC_Dextran_three_compartment_model_compartment_3
type: PhysicalEntity
member physical entity: FITC_Dextran_three_compartment_model_compartment_3
cellular location: Dictyostelium discoideum AX2

BioModels Database
type: Provenance
xref: BIOMD0000000986

Pyranine_three_compartment_model_compartment_3
type: PhysicalEntity
member physical entity: Pyranine_three_compartment_model_compartment_3
cellular location: Dictyostelium discoideum AX2

…
type: Stoichiometry
stoichiometric coefficient: 1.0

Pyranine_single_compartment_model
type: SmallMolecule
xref: CHEBI:52083

Pyranine_three_compartment_model_compartment_3
type: PhysicalEntity
member physical entity: Pyranine_three_compartment_model_compartment_3
cellular location: Dictyostelium discoideum AX2

FITC_Dextran_three_compartment_model_compartment_2
type: PhysicalEntity
member physical entity: FITC_Dextran_three_compartment_model_compartment_2
cellular location: Dictyostelium discoideum AX2

MODEL2102090001
type: UnificationXref
id: MODEL2102090001
db: BioModels Database

BioModels Database
type: Provenance
xref: MODEL2102090001

…
type: Stoichiometry
stoichiometric coefficient: 1.0

…
type: Stoichiometry
stoichiometric coefficient: 1.0

http://identifiers.org/taxonomy/366501
type: UnificationXref
id: 366501
db: Taxonomy

Pyranine_three_compartment_model_compartment_2
type: PhysicalEntity
member physical entity: Pyranine_three_compartment_model_compartment_2
cellular location: Dictyostelium discoideum AX2