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@PG	ID:2	PN:IntervalListTools	CL:net.sf.picard.util.IntervalListTools INPUT=[joined.regions.interval_list, exome.evaluation.padded.interval_list] OUTPUT=whole.genome.calling.region.interval_list ACTION=SUBTRACT HEAD=1 INVERT=true    PADDING=0 UNIQUE=false SORT=true SCATTER_COUNT=1 VERBOSITY=INFO QUIET=false VALIDATION_STRINGENCY=STRICT COMPRESSION_LEVEL=5 MAX_RECORDS_IN_RAM=500000 CREATE_INDEX=false CREATE_MD5_FILE=false
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