SAMPID SMATSSCR SMCENTER SMPTHNTS SMRIN SMTS SMTSD SMUBRID SMTSISCH SMTSPAX SMNABTCH SMNABTCHT SMNABTCHD SMGEBTCH SMGEBTCHD SMGEBTCHT SMAFRZE SMGTC SME2MPRT SMCHMPRS SMNTRART SMNUMGPS SMMAPRT SMEXNCRT SM550NRM SMGNSDTC SMUNMPRT SM350NRM SMRDLGTH SMMNCPB SME1MMRT SMSFLGTH SMESTLBS SMMPPD SMNTERRT SMRRNANM SMRDTTL SMVQCFL SMMNCV SMTRSCPT SMMPPDPR SMCGLGTH SMGAPPCT SMUNPDRD SMNTRNRT SMMPUNRT SMEXPEFF SMMPPDUN SME2MMRT SME2ANTI SMALTALG SME2SNSE SMMFLGTH SME1ANTI SMSPLTRD SMBSMMRT SME1SNSE SME1PCTS SMRRNART SME1MPRT SMNUM5CD SMDPMPRT SME2PCTS GTEX-1117F-0003-SM-58Q7G B1 Blood Whole Blood 0013756 1188 BP-38516 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/02/2013 LCSET-4574 01/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-1117F-0003-SM-5DWSB B1 Blood Whole Blood 0013756 1188 BP-38516 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/02/2013 GTEx_OM25_Dec_01 01/28/2014 Illumina OMNI SNP Array OMNI GTEX-1117F-0003-SM-6WBT7 B1 Blood Whole Blood 0013756 1188 BP-38516 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/02/2013 LCSET-6056 09/20/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-1117F-0011-R10a-SM-AHZ7F B1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 1193 ChIP-Seq GTEX-1117F-0011-R10b-SM-CYKQ8 B1, A1 7.2 Brain Brain - Frontal Cortex (BA9) 0009834 1193 BP-42319 RNA isolation_PAXgene Tissue miRNA 08/14/2013 RIP-Seq GTEX-1117F-0226-SM-5GZZ7 0 B1 2 pieces, ~15% vessel stroma, rep delineated 6.8 Adipose Tissue Adipose - Subcutaneous 0002190 1214 1125 BP-43693 RNA Extraction from Paxgene-derived Lysate Plate Based 09/17/2013 LCSET-4804 03/05/2014 TruSeq.v1 RNASEQ 0.986026 345562 0.966793 0.990383 0.756726 23548 1 76 0.00240323 136 0 6.68332e+07 0.0329192 209558 6.74822e+07 8.79766e+06 23575 3.3158e+07 0 0.210067 0.990383 0.749449 6.68332e+07 0.00391915 1.44627e+07 8.9149e+06 1.45756e+07 144 1.46488e+07 1.19993e+07 0.00315785 1.46695e+07 50.0354 0.00310538 0.99474 0 50.1944 GTEX-1117F-0426-SM-5EGHI 0 B1 2 pieces, !5% fibrous connective tissue, delineated (rep) 7.1 Muscle Muscle - Skeletal 0011907 1220 1119 BP-43495 RNA Extraction from Paxgene-derived Lysate Plate Based 09/12/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.985786 145441 0.978816 0.990413 0.838961 20246 1 76 0.00241283 137 0 5.99636e+07 0.0209516 423484 6.05441e+07 9.60146e+06 20259 2.97858e+07 0 0.139855 0.990413 0.830918 5.99636e+07 0.00553754 1.31545e+07 8.38344e+06 1.31258e+07 139 1.31915e+07 1.15502e+07 0.00396788 1.33405e+07 50.2809 0.00699464 0.995041 0 49.9455 GTEX-1117F-0526-SM-5EGHJ 0 B1 2 pieces, clean, Monckebeg medial sclerosis, rep delineated 8 Blood Vessel Artery - Tibial 0007610 1221 1120 BP-43495 RNA Extraction from Paxgene-derived Lysate Plate Based 09/12/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.983859 223040 0.97136 0.98893 0.767837 22193 1 76 0.00263069 126 0 5.98394e+07 0.0283102 173556 6.05092e+07 9.40759e+06 22218 2.9681e+07 0 0.203524 0.98893 0.759337 5.98394e+07 0.00592874 1.29512e+07 6.13979e+06 1.30901e+07 125 1.31754e+07 1.10003e+07 0.00427126 1.31509e+07 49.9535 0.00286826 0.994001 0 50.2667 GTEX-1117F-0626-SM-5N9CS 1 B1 2 pieces, up to 4mm aderent fat/nerve/vessel, delineated 6.9 Blood Vessel Artery - Coronary 0001621 1243 1098 BP-43956 RNA Extraction from Paxgene-derived Lysate Plate Based 09/25/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.990294 174501 0.970076 0.991275 0.76982 23331 1 76 0.0030529 136 0 6.98592e+07 0.0296435 376087 7.0474e+07 3.63312e+06 23354 3.47665e+07 0 0.200257 0.991275 0.763103 6.98592e+07 0.00367148 1.51676e+07 6.12486e+06 1.52201e+07 151 1.51642e+07 1.16179e+07 0.00336188 1.52919e+07 50.2096 0.00533653 0.992257 0 50.0865 GTEX-1117F-0726-SM-5GIEN 1 B1 2 pieces, no abnormalities 6.3 Heart Heart - Atrial Appendage 0006631 1244 1097 BP-44261 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4796 02/27/2014 TruSeq.v1 RNASEQ 0.990734 184394 0.97883 0.993223 0.803478 22000 1 76 0.00311411 131 0 6.28857e+07 0.0208913 1.93643e+06 6.33148e+07 8.25297e+06 22015 3.12915e+07 0 0.175352 0.993223 0.798033 6.28857e+07 0.00377222 1.36366e+07 9.07565e+06 1.36128e+07 146 1.36271e+07 9.26607e+06 0.00344234 1.37567e+07 50.2367 0.0305841 0.995711 0 49.9563 GTEX-1117F-1326-SM-5EGHH 1 B1 2 pieces, diffuse mesothelial hyperplasia; ~10% vessel/fibrous tissue (delineated) 5.9 Adipose Tissue Adipose - Visceral (Omentum) 0010414 1277 1066 BP-43495 RNA Extraction from Paxgene-derived Lysate Plate Based 09/12/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.97952 197036 0.975456 0.984949 0.75952 22537 1 76 0.00320572 125 0 5.97958e+07 0.0230271 627193 6.07095e+07 9.77016e+06 22563 2.96104e+07 0 0.215936 0.984949 0.748088 5.97958e+07 0.00652572 1.32035e+07 1.06673e+07 1.32729e+07 128 1.33794e+07 9.63106e+06 0.00485657 1.34087e+07 50.0547 0.010331 0.990378 0 50.1311 GTEX-1117F-2226-SM-5N9CH 1 B1 1 piece vascular tissue, probably ovarian hilum. Not GTEx target tissue 6.6 Ovary Ovary 0000992 1326 1020 BP-43956 RNA Extraction from Paxgene-derived Lysate Plate Based 09/25/2013 LCSET-4904 03/22/2014 TruSeq.v1 EXCLUDE 0.98945 124364 0.975523 0.990232 0.737874 23070 1 76 0.00304207 137 0 7.12552e+07 0.0241708 150706 7.1958e+07 3.5473e+06 23105 3.54604e+07 0 0.237649 0.990232 0.730667 7.12552e+07 0.00357204 1.57974e+07 7.11921e+06 1.58243e+07 145 1.57704e+07 1.27006e+07 0.00330685 1.59125e+07 50.2242 0.00209436 0.991015 0 50.0425 GTEX-1117F-2426-SM-5EGGH 1 B1 1 piece mymetrial smooth muscle as in corresonding -25 block 6.3 Uterus Uterus 0000995 1332 1014 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.984661 194724 0.965403 0.988792 0.735671 23103 1 76 0.00255558 119 0 5.82363e+07 0.0343173 220923 5.88964e+07 7.76094e+06 23129 2.89044e+07 0 0.229732 0.988792 0.727426 5.82363e+07 0.00557137 1.25514e+07 6.07303e+06 1.27295e+07 122 1.27675e+07 9.25983e+06 0.00405717 1.27425e+07 49.951 0.00375104 0.992923 0 50.3523 GTEX-1117F-2526-SM-5GZY6 2 B1 6 pieces, squamous epithelium is ~ 2-3% thickness, partially sloughing 6.5 Vagina Vagina 0000996 1329 1017 BP-43693 RNA Extraction from Paxgene-derived Lysate Plate Based 09/17/2013 LCSET-4804,LCSET-5161 03/17/2014 TruSeq.v1 RNASEQ 0.98259 344132 0.971094 0.987546 0.72005 24334 1 76 0.00372487 159 0 8.52884e+07 0.0286493 319586 8.63639e+07 8.69306e+06 24371 4.2284e+07 0 0.251044 0.987546 0.711083 8.52884e+07 0.00528319 1.90043e+07 1.14784e+07 1.90735e+07 169 1.92219e+07 1.3111e+07 0.00450012 1.92766e+07 50.071 0.00370046 0.992502 0 50.0908 GTEX-1117F-2826-SM-5GZXL 1 B1 2 pieces, fibrocystic changes, rep ductal/lobular elements delineated 5.8 Breast Breast - Mammary Tissue 0008367 1340 1008 BP-43507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/12/2013 LCSET-4804 03/05/2014 TruSeq.v1 RNASEQ 0.986772 292774 0.974209 0.990544 0.784373 23391 1 76 0.00251812 146 0 6.82899e+07 0.0254389 1.03572e+06 6.89418e+07 7.84024e+06 23415 3.39088e+07 0 0.189836 0.990544 0.776956 6.82899e+07 0.00401725 1.49524e+07 7.90489e+06 1.49565e+07 154 1.50038e+07 1.14651e+07 0.00326483 1.51518e+07 50.2455 0.0150232 0.994315 0 50.0068 GTEX-1117F-2926-SM-5GZYI 0 B1 6 pieces, minimal fat, squamous epithelium is ~50 microns, ~3% thickness 7.7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1341 1006 BP-43693 RNA Extraction from Paxgene-derived Lysate Plate Based 09/17/2013 LCSET-4804 03/05/2014 TruSeq.v1 RNASEQ 0.98557 313219 0.979994 0.99015 0.780314 22669 1 76 0.00248983 150 0 6.58073e+07 0.0197528 329878 6.64619e+07 8.84653e+06 22691 3.26483e+07 0 0.19968 0.99015 0.772628 6.58073e+07 0.00412103 1.44343e+07 7.65048e+06 1.4524e+07 149 1.4611e+07 1.16301e+07 0.00330166 1.46412e+07 50.0516 0.00496341 0.99473 0 50.1548 GTEX-1117F-3026-SM-5GZYU 1 B1 2 pieces, generally good, one aliquot has ~25% adherent nubbing of adipose/muscular tissue 8.3 Salivary Gland Minor Salivary Gland 0006330 1343 1005 BP-43693 RNA Extraction from Paxgene-derived Lysate Plate Based 09/17/2013 LCSET-4804 03/05/2014 TruSeq.v1 RNASEQ 0.987327 241763 0.96673 0.99017 0.745379 24835 1 76 0.00293242 138 0 6.39549e+07 0.0319169 270561 6.45898e+07 8.14951e+06 24864 3.17581e+07 0 0.221351 0.99017 0.738052 6.39549e+07 0.00391051 1.4167e+07 8.6913e+06 1.41785e+07 135 1.42503e+07 1.06016e+07 0.00342006 1.4268e+07 50.0311 0.00418891 0.993013 0 50.0203 GTEX-1117F-3226-SM-5N9CT 1 B1 2 pieces 6.2 Brain Brain - Cortex 0001870 1418 931 BP-43956 RNA Extraction from Paxgene-derived Lysate Plate Based 09/25/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.991088 282429 0.963806 0.992538 0.830713 23677 1 76 0.00318897 271 0 8.03926e+07 0.0359635 5.02476e+06 8.0997e+07 3.87614e+06 23692 4.00041e+07 0 0.133093 0.992538 0.824515 8.03926e+07 0.00380108 1.76403e+07 1.4886e+07 1.77755e+07 269 1.76099e+07 8.16385e+06 0.00349458 1.79069e+07 50.418 0.0620363 0.993989 0 50.191 GTEX-111CU-0003-SM-58Q95 B1 Blood Whole Blood 0013756 -148 BP-38688 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/07/2013 LCSET-4574 01/20/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-111CU-0003-SM-5DWTR B1 Blood Whole Blood 0013756 -148 BP-38688 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/07/2013 GTEx_OM25_Dec_01 01/29/2014 Illumina OMNI SNP Array OMNI GTEX-111CU-0003-SM-6WBUD B1 Blood Whole Blood 0013756 -148 BP-38688 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/07/2013 LCSET-6056 09/22/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-111CU-0126-SM-5GZWZ 0 B1 2 pieces 7.9 Adrenal Gland Adrenal Gland 0002369 67 642 BP-43693 RNA Extraction from Paxgene-derived Lysate Plate Based 09/17/2013 LCSET-4804 03/05/2014 TruSeq.v1 RNASEQ 0.9907 240659 0.978599 0.993224 0.828072 23135 1 76 0.00215619 270 0 8.149e+07 0.0210628 1.2004e+06 8.20459e+07 9.73884e+06 23154 4.05543e+07 0 0.150527 0.993224 0.822461 8.149e+07 0.00320897 1.80479e+07 1.51999e+07 1.8003e+07 259 1.79892e+07 1.27568e+07 0.00268124 1.82553e+07 50.3671 0.0146308 0.995748 0 49.9377 GTEX-111CU-0226-SM-5GZXC 0 B1 2 pieces, small amount of attached fat and skeletal muscle 7.4 Thyroid Thyroid 0002046 69 640 BP-43693 RNA Extraction from Paxgene-derived Lysate Plate Based 09/17/2013 LCSET-4804 03/05/2014 TruSeq.v1 RNASEQ 0.990453 243413 0.974508 0.993029 0.795694 23959 1 76 0.00210467 205 0 8.76512e+07 0.0251936 203007 8.82665e+07 1.10555e+07 23990 4.36154e+07 0 0.178814 0.993029 0.790147 8.76512e+07 0.0030812 1.93551e+07 8.40525e+06 1.94135e+07 240 1.94703e+07 1.6057e+07 0.00259167 1.95077e+07 50.048 0.00229993 0.995605 0 50.0753 GTEX-111CU-0326-SM-5GZXO 0 B1 2 pieces, numerous hemosiderin-laden macrophages, patchy bronchopneumonia, focus of cartilage 7.6 Lung Lung 0008952 70 639 BP-43693 RNA Extraction from Paxgene-derived Lysate Plate Based 09/17/2013 LCSET-4804 03/05/2014 TruSeq.v1 RNASEQ 0.99153 216735 0.97613 0.993878 0.823567 23209 1 76 0.0021316 208 0 8.16651e+07 0.0236111 371442 8.21682e+07 1.03151e+07 23235 4.06473e+07 0 0.152563 0.993878 0.818525 8.16651e+07 0.00322808 1.80361e+07 7.08684e+06 1.81543e+07 227 1.81622e+07 1.4858e+07 0.00267855 1.82128e+07 50.0695 0.00452051 0.996225 0 50.1633 GTEX-111CU-0426-SM-5GZY1 0 B1 2 pieces 7.3 Spleen Spleen 0002106 71 638 BP-43693 RNA Extraction from Paxgene-derived Lysate Plate Based 09/17/2013 LCSET-4804 03/05/2014 TruSeq.v1 RNASEQ 0.991151 337719 0.967919 0.99342 0.805221 25285 1 76 0.00231646 274 0 9.82104e+07 0.0312646 410807 9.88609e+07 1.2198e+07 25322 4.88537e+07 0 0.162697 0.99342 0.799923 9.82104e+07 0.00319034 2.14971e+07 1.43551e+07 2.15327e+07 279 2.15745e+07 1.81762e+07 0.0027524 2.16688e+07 50.1091 0.0041554 0.995688 0 50.0414 GTEX-111CU-0526-SM-5EGHK 1 B1 2 pieces, include 20 and 40% fat (attached and internal) 7.2 Pancreas Pancreas 0001150 72 637 BP-43495 RNA Extraction from Paxgene-derived Lysate Plate Based 09/12/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.985529 181343 0.973553 0.990411 0.845136 20708 1 76 0.00254345 93 0 5.84027e+07 0.0262148 89664 5.89682e+07 9.70792e+06 20718 2.89943e+07 0 0.128417 0.990411 0.837032 5.84027e+07 0.00559195 1.33632e+07 1.37729e+07 1.33786e+07 97 1.34152e+07 1.6256e+07 0.00406019 1.36101e+07 50.3607 0.00152055 0.995293 0 50.0289 GTEX-111CU-0626-SM-5EGHL 0 B1 6 pieces, well trimmed of mucosa 7.9 Esophagus Esophagus - Muscularis 0004648 76 633 BP-43495 RNA Extraction from Paxgene-derived Lysate Plate Based 09/12/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.987543 175463 0.975958 0.991908 0.840326 21691 1 76 0.00216143 182 0 6.92938e+07 0.0237549 456350 6.98591e+07 1.00949e+07 21707 3.44232e+07 0 0.135632 0.991908 0.833527 6.92938e+07 0.00538477 1.49619e+07 6.81217e+06 1.49721e+07 171 1.50107e+07 1.21969e+07 0.00376601 1.52035e+07 50.3191 0.00653244 0.996274 0 50.017 GTEX-111CU-0726-SM-5GZYD 0 B1 6 pieces, well trimmed of muscularis, few submucosal glands (some delineated) 8.8 Esophagus Esophagus - Mucosa 0006920 77 632 BP-43693 RNA Extraction from Paxgene-derived Lysate Plate Based 09/17/2013 LCSET-4804 03/05/2014 TruSeq.v1 RNASEQ 0.98884 211714 0.975236 0.991919 0.82761 23363 1 76 0.00222774 212 0 8.11311e+07 0.0243204 290903 8.1792e+07 1.1388e+07 23381 4.03511e+07 0 0.147627 0.991919 0.820921 8.11311e+07 0.00308871 1.80668e+07 1.0363e+07 1.80492e+07 210 1.8093e+07 1.653e+07 0.00265689 1.82631e+07 50.2339 0.00355662 0.994997 0 49.9756 GTEX-111CU-0826-SM-5EGIJ 0 B1 6 pieces, well trimmed of mucosa 8 Esophagus Esophagus - Gastroesophageal Junction 0004550 81 628 BP-43529 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.985797 185629 0.973015 0.990417 0.817513 22300 1 76 0.0022048 137 0 6.39213e+07 0.026733 314648 6.45398e+07 1.00634e+07 22317 3.17408e+07 0 0.155502 0.990417 0.809678 6.39213e+07 0.00516498 1.38794e+07 6.31428e+06 1.39073e+07 149 1.39544e+07 1.0902e+07 0.00367799 1.41077e+07 50.2732 0.00487525 0.995036 0 50.0502 GTEX-111CU-0926-SM-5EGIK 0 B1 6 pieces, few with small portion of muscularis 7.8 Stomach Stomach 0000945 83 626 BP-43529 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.979521 177121 0.981442 0.984038 0.842236 21333 1 76 0.00197131 265 0 5.94903e+07 0.0181959 262075 6.04553e+07 9.03232e+06 21344 2.95311e+07 0 0.139206 0.984038 0.828792 5.94903e+07 0.00498414 1.37196e+07 6.53746e+07 1.38172e+07 167 1.38651e+07 1.6709e+07 0.00347081 1.39386e+07 50.1322 0.00433502 0.988555 0 50.1771 GTEX-111CU-1026-SM-5EGIL 0 B1 2 pieces 7.4 Adipose Tissue Adipose - Visceral (Omentum) 0010414 84 625 BP-43529 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.985146 216518 0.979333 0.990145 0.851509 21995 1 76 0.0022622 203 0 7.76821e+07 0.0204191 1.08518e+06 7.84553e+07 1.24624e+07 22013 3.85662e+07 0 0.127824 0.990145 0.843117 7.76821e+07 0.00548048 1.71e+07 1.11785e+07 1.70439e+07 246 1.70772e+07 1.19732e+07 0.00386321 1.74242e+07 50.5029 0.0138318 0.995145 0 49.9178 GTEX-111CU-1126-SM-5EGIM 1 B1 6 pieces, well trimmed with only scant attached fat 6.5 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 86 623 BP-43529 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.981493 186212 0.970077 0.987541 0.785544 22439 1 76 0.00234567 158 0 5.73142e+07 0.0297603 461473 5.80373e+07 9.63306e+06 22457 2.84141e+07 0 0.184533 0.987541 0.775757 5.73142e+07 0.00593885 1.25148e+07 7.63547e+06 1.25655e+07 140 1.2624e+07 8.41844e+06 0.00413126 1.27849e+07 50.3166 0.00795132 0.993589 0 50.1011 GTEX-111CU-1226-SM-5EGIN 1 B1 6 pieces, well trimmed of mucosa 7.3 Colon Colon - Sigmoid 0001159 91 618 BP-43529 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.987678 187150 0.974827 0.991574 0.826701 22240 1 76 0.00214621 148 0 6.34707e+07 0.0249216 301125 6.40101e+07 8.63761e+06 22252 3.1537e+07 0 0.148127 0.991574 0.819735 6.34707e+07 0.00516543 1.37703e+07 6.02328e+06 1.38062e+07 149 1.38153e+07 1.11254e+07 0.00364989 1.39915e+07 50.3169 0.00470434 0.99547 0 50.0652 GTEX-111CU-1326-SM-5NQ8L 0 B1 6 pieces, prominent lymphoid component in 4 of 6 pieces 7.5 Small Intestine Small Intestine - Terminal Ileum 0001211 94 615 BP-43529 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2013 LCSET-4906 03/22/2014 TruSeq.v1 RNASEQ 0.990741 180493 0.974979 0.99286 0.82586 22800 1 76 0.00189086 165 0 7.51845e+07 0.0247836 616942 7.57252e+07 5.76464e+06 22820 3.74306e+07 0 0.149119 0.99286 0.819963 7.51845e+07 0.00292535 1.64053e+07 7.18205e+06 1.66236e+07 195 1.65349e+07 1.23416e+07 0.002407 1.66492e+07 50.1723 0.00814712 0.994979 0 50.3305 GTEX-111CU-1426-SM-5GZYP 1 B1 6 pieces, predominantly mucosa and submucosa with small portion of muscularis, edema 7.8 Colon Colon - Transverse 0001157 100 609 BP-43693 RNA Extraction from Paxgene-derived Lysate Plate Based 09/17/2013 LCSET-4804 03/05/2014 TruSeq.v1 RNASEQ 0.989352 229793 0.975903 0.99248 0.817932 22970 1 76 0.00225654 229 0 8.01395e+07 0.0233889 634774 8.07467e+07 1.00863e+07 22993 3.984e+07 0 0.157971 0.99248 0.811782 8.01395e+07 0.0032622 1.78767e+07 1.13872e+07 1.77944e+07 235 1.7849e+07 1.34059e+07 0.00275778 1.8057e+07 50.2897 0.0078613 0.995609 0 49.8847 GTEX-111CU-1526-SM-5N9FS 1 B1 2 pieces, patchy chronic prostatitis, portion of seminal vesicle 5.7 Prostate Prostate 0002367 103 606 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.986912 472069 0.967739 0.988451 0.789782 25526 1 76 0.00402975 271 0 1.04235e+08 0.0320565 354320 1.05452e+08 5.69945e+06 25563 5.17358e+07 0 0.177957 0.988451 0.780661 1.04235e+08 0.00418277 2.2753e+07 1.12574e+07 2.28687e+07 323 2.27932e+07 1.49353e+07 0.00410614 2.29879e+07 50.2127 0.00336 0.98999 0 50.1268 GTEX-111CU-1726-SM-5EGHM 0 B1 2 pieces, active spermatogenesis 6.9 Testis Testis 0000473 108 601 BP-43495 RNA Extraction from Paxgene-derived Lysate Plate Based 09/12/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.984303 227756 0.936059 0.989243 0.753721 31570 1 76 0.00232766 125 0 6.37073e+07 0.0636368 719937 6.44001e+07 9.66596e+06 31621 3.16225e+07 0 0.182338 0.989243 0.745613 6.37073e+07 0.00551321 1.33426e+07 9.40222e+06 1.33413e+07 131 1.34461e+07 1.09062e+07 0.00391248 1.35186e+07 50.1345 0.0111791 0.994182 0 49.9974 GTEX-111CU-1826-SM-5GZYN 0 B1 2 pieces, small portion of nerve (<10% of one piece) 7.5 Adipose Tissue Adipose - Subcutaneous 0002190 138 571 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4804 03/05/2014 TruSeq.v1 RNASEQ 0.989284 273609 0.97799 0.992599 0.824185 22368 1 76 0.0021283 149 0 6.93063e+07 0.0217092 148616 6.98231e+07 8.52491e+06 22386 3.44557e+07 0 0.153806 0.992599 0.818085 6.93063e+07 0.00339715 1.52882e+07 6.07105e+06 1.53605e+07 161 1.5416e+07 1.31919e+07 0.0027606 1.54512e+07 50.057 0.00212847 0.995915 0 50.118 GTEX-111CU-1926-SM-5GZYZ 1 B1 6 pieces, several with 10-30% predominantly attached adipose tissue, squamous epithelium is ~45-50 microns thick 5.9 Skin Skin - Sun Exposed (Lower leg) 0004264 141 568 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4804 03/05/2014 TruSeq.v1 EXCLUDE 0.986289 378238 0.969821 0.989655 0.769778 25159 1 76 0.00229169 263 0 9.31994e+07 0.0299903 612312 9.41736e+07 1.22107e+07 25189 4.63031e+07 0 0.200043 0.989655 0.761815 9.31994e+07 0.00380585 2.04908e+07 1.43746e+07 2.05611e+07 256 2.05467e+07 1.21314e+07 0.0030462 2.08141e+07 50.3232 0.00650195 0.993022 0 50.0856 GTEX-111CU-2026-SM-5GZZC 1 B1 2 pieces, includes ~10% internal fat 8.1 Muscle Muscle - Skeletal 0011907 144 565 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4804 03/05/2014 TruSeq.v1 RNASEQ 0.992125 242236 0.983495 0.994271 0.871302 19832 1 76 0.00189213 215 0 8.1039e+07 0.0162653 882660 8.1506e+07 9.93238e+06 19843 4.03489e+07 0 0.112193 0.994271 0.86631 8.1039e+07 0.00290881 1.75923e+07 1.23091e+07 1.75743e+07 241 1.75444e+07 1.61704e+07 0.00239937 1.7784e+07 50.3391 0.0108294 0.996416 0 49.9744 GTEX-111CU-2226-SM-5N9G5 1 B1 6 pieces, includes up to 20-30% fat 5.7 Nerve Nerve - Tibial 0001323 148 561 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.988661 302406 0.969955 0.989955 0.766338 24219 1 76 0.00395637 174 0 8.55854e+07 0.0298377 303325 8.64538e+07 4.18167e+06 24249 4.25228e+07 0 0.203617 0.989955 0.75864 8.55854e+07 0.0040234 1.88346e+07 7.28499e+06 1.88987e+07 198 1.88434e+07 1.26353e+07 0.00398984 1.9001e+07 50.2082 0.00350852 0.991249 0 50.0849 GTEX-111FC-0001-SM-58Q7U B1 Blood Whole Blood 0013756 963 BP-38625 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/06/2013 LCSET-4574 01/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-111FC-0001-SM-5DWSO B1 Blood Whole Blood 0013756 963 BP-38625 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/06/2013 GTEx_OM25_Dec_01 01/29/2014 Illumina OMNI SNP Array OMNI GTEX-111FC-0001-SM-6WBTJ B1 Blood Whole Blood 0013756 963 BP-38625 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/06/2013 LCSET-6056 09/20/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-111FC-0011-R10a-SM-AHZ7K B1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 970 ChIP-Seq GTEX-111FC-0011-R10a-SM-CYKQ9 B1, A1 8.5 Brain Brain - Frontal Cortex (BA9) 0009834 970 BP-42339 RNA isolation_PAXgene Tissue miRNA 08/14/2013 RIP-Seq GTEX-111FC-0126-SM-5N9DL 1 B1 6 pieces, include 5-10% attached and internal adipose tissue, squamous epithelium is 30-42 microns thick 7.2 Skin Skin - Sun Exposed (Lower leg) 0004264 1036 870 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.992184 256959 0.974066 0.992999 0.827997 23779 1 76 0.00281383 299 0 9.73027e+07 0.0255496 715324 9.79887e+07 4.42266e+06 23806 4.8454e+07 0 0.146069 0.992999 0.8222 9.73027e+07 0.00339275 2.09298e+07 1.2311e+07 2.10399e+07 295 2.09527e+07 1.67289e+07 0.00310305 2.10928e+07 50.1666 0.00730006 0.993813 0 50.1312 GTEX-111FC-0226-SM-5N9B8 2 B1 2 pieces, larger piece is 30% fibrovascular tissue and nerve, smaller piece ~10% 7.3 Adipose Tissue Adipose - Subcutaneous 0002190 1040 869 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.992062 167541 0.974332 0.992977 0.812219 23977 1 76 0.00280933 282 0 9.46419e+07 0.0253254 357934 9.53113e+07 4.85383e+06 24018 4.71286e+07 0 0.162113 0.992977 0.806515 9.46419e+07 0.00340007 2.07783e+07 8.50916e+06 2.08752e+07 256 2.08313e+07 1.75542e+07 0.00310443 2.09111e+07 50.0955 0.00375542 0.993892 0 50.1164 GTEX-111FC-0326-SM-5GZZ1 1 B1 2 pieces, skeletal muscle with only scant adipose tissue, small portion of tendon and fibrovascular tissue 8.2 Muscle Muscle - Skeletal 0011907 1045 862 BP-43529 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2013 LCSET-4804 03/05/2014 TruSeq.v1 RNASEQ 0.989243 253951 0.98377 0.992558 0.863363 20025 1 76 0.00217369 201 0 7.86056e+07 0.0160552 1.11851e+06 7.91949e+07 1.11002e+07 20036 3.90911e+07 0 0.120407 0.992558 0.856938 7.86056e+07 0.00332793 1.73109e+07 1.31875e+07 1.71526e+07 205 1.72386e+07 1.59485e+07 0.00274888 1.74581e+07 50.3163 0.0141235 0.995872 0 49.7703 GTEX-111FC-0426-SM-5N9CV 1 B1 2 pieces, medial calcific sclerosis (Monckeberg's sclerosis), both sections 7.8 Blood Vessel Artery - Tibial 0007610 1046 862 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.992338 142487 0.975816 0.993075 0.840283 21257 1 76 0.00271524 147 0 7.0447e+07 0.0237288 209991 7.09382e+07 3.1584e+06 21269 3.50762e+07 0 0.135532 0.993075 0.834465 7.0447e+07 0.00324538 1.51553e+07 5.48971e+06 1.51822e+07 155 1.512e+07 1.47883e+07 0.00298011 1.52711e+07 50.2487 0.0029602 0.993812 0 50.0443 GTEX-111FC-0526-SM-5GZZ8 1 B1 2 pieces, includes 10-20% predominantly internal adipose tissue 7.2 Nerve Nerve - Tibial 0001323 1050 858 BP-43507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/12/2013 LCSET-4804 03/05/2014 TruSeq.v1 RNASEQ 0.988325 297754 0.965373 0.991446 0.749191 24139 1 76 0.00231331 160 0 7.18896e+07 0.0343213 221742 7.25098e+07 8.98322e+06 24176 3.57182e+07 0 0.216182 0.991446 0.742783 7.18896e+07 0.00366955 1.57556e+07 6.75489e+06 1.58686e+07 161 1.59175e+07 1.10687e+07 0.00298929 1.59233e+07 50.0091 0.0030581 0.994568 0 50.1787 GTEX-111FC-0626-SM-5N9CU 1 B1 2 pieces, includes up to ~10% internal adipose tissue 7.3 Heart Heart - Atrial Appendage 0006631 1054 852 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.992352 166671 0.971632 0.993478 0.792965 22541 1 76 0.00280312 123 0 6.35757e+07 0.0280958 1.0168e+06 6.3993e+07 3.07733e+06 22563 3.16629e+07 0 0.178667 0.993478 0.787794 6.35757e+07 0.00329551 1.38393e+07 7.02463e+06 1.38904e+07 141 1.38698e+07 1.04501e+07 0.00304904 1.39272e+07 50.1033 0.0158892 0.994604 0 50.0921 GTEX-111FC-0826-SM-5GZWO 1 B1 2 pieces, small attachment of fat, vessel, and nerve 7 Heart Heart - Left Ventricle 0006566 1060 849 BP-43693 RNA Extraction from Paxgene-derived Lysate Plate Based 09/17/2013 LCSET-4804 03/05/2014 TruSeq.v1 RNASEQ 0.987864 238512 0.979429 0.991899 0.824639 22216 1 76 0.00231171 199 0 7.93912e+07 0.0203939 2.7121e+06 8.00396e+07 1.02786e+07 22238 3.94342e+07 0 0.15479 0.991899 0.817958 7.93912e+07 0.00400837 1.75955e+07 1.38081e+07 1.74849e+07 226 1.76305e+07 1.02812e+07 0.00315659 1.77374e+07 50.151 0.0338844 0.995934 0 49.8423 GTEX-111FC-0826-SM-CYKRT 1 B1 2 pieces, small attachment of fat, vessel, and nerve 7 Heart Heart - Left Ventricle 0006566 1060 849 BP-43693 RNA Extraction from Paxgene-derived Lysate Plate Based 09/17/2013 RIP-Seq GTEX-111FC-1026-SM-5GZX1 2 B1 2 pieces, moderate autolysis 5.9 Thyroid Thyroid 0002046 1078 832 BP-43693 RNA Extraction from Paxgene-derived Lysate Plate Based 09/17/2013 LCSET-4804 03/05/2014 TruSeq.v1 RNASEQ 0.987211 224397 0.966388 0.990886 0.802753 24059 1 76 0.0022086 162 0 7.38064e+07 0.0333149 359489 7.44853e+07 9.73315e+06 24085 3.66508e+07 0 0.163635 0.990886 0.795436 7.38064e+07 0.00376159 1.60697e+07 8.29446e+06 1.61566e+07 174 1.62073e+07 1.25647e+07 0.00298222 1.62809e+07 50.1134 0.00482631 0.994561 0 50.1349 GTEX-111FC-1126-SM-5GZWU 1 B1 2 pieces, one piece includes large vessel and focus of cartilage, congestion 7.2 Lung Lung 0008952 1080 830 BP-43507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/12/2013 LCSET-4804 03/05/2014 TruSeq.v1 RNASEQ 0.986343 275350 0.974912 0.989886 0.750556 24385 1 76 0.00255609 150 0 7.05666e+07 0.0245787 380696 7.12875e+07 8.3662e+06 24413 3.50119e+07 0 0.224356 0.989886 0.742965 7.05666e+07 0.00406479 1.57499e+07 1.32083e+07 1.58255e+07 165 1.58948e+07 1.02547e+07 0.00330774 1.59263e+07 50.0494 0.00534029 0.99343 0 50.1197 GTEX-111FC-1326-SM-5N9D9 2 B1 2 pieces, marked congestion/autolysis 5.7 Spleen Spleen 0002106 1100 811 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.985058 994408 0.926752 0.986175 0.714653 24551 1 76 0.00317938 163 0 8.56412e+07 0.0729688 1.12993e+06 8.68418e+07 4.30949e+06 24587 4.25754e+07 0 0.212099 0.986175 0.704773 8.56412e+07 0.0037535 1.79656e+07 4.01386e+07 1.81668e+07 195 1.80846e+07 1.04107e+07 0.00346612 1.81692e+07 50.1166 0.0130113 0.987293 0 50.2785 GTEX-111FC-1426-SM-5N9C7 1 B1 1 piece, adipose tissue (not pancreas as initially designated) 5.8 Adipose Tissue Adipose - Subcutaneous 0002190 1104 807 BP-45782 RNA Extraction from Paxgene-derived Lysate Plate Based 11/14/2013 LCSET-4904 03/22/2014 TruSeq.v1 EXCLUDE 0.990545 217167 0.974308 0.99132 0.81865 23507 1 76 0.0028666 211 0 8.65015e+07 0.0254293 653450 8.72589e+07 4.26232e+06 23536 4.30539e+07 0 0.155657 0.99132 0.811545 8.65015e+07 0.0033769 1.90775e+07 9.58338e+06 1.91378e+07 229 1.90633e+07 1.43009e+07 0.00312155 1.92229e+07 50.2085 0.00748864 0.992095 0 50.0789 GTEX-111FC-1926-SM-5GZYC 2 B1 2 pieces, active spermatogenesis 5.9 Testis Testis 0000473 1116 796 BP-43529 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2013 LCSET-4804 03/05/2014 TruSeq.v1 RNASEQ 0.988125 420812 0.925298 0.990914 0.713629 33418 1 76 0.00240112 177 0 8.61358e+07 0.0744034 1.05992e+06 8.69257e+07 1.02556e+07 33482 4.28243e+07 0 0.21167 0.990914 0.707145 8.61358e+07 0.00361006 1.7763e+07 1.47061e+07 1.77533e+07 188 1.78189e+07 1.21118e+07 0.00300389 1.79155e+07 50.1353 0.0121935 0.993703 0 49.9862 GTEX-111FC-2026-SM-5GZYO 2 B1 2 pieces, glands largely sloughed, focal chronic inflammation 5.8 Prostate Prostate 0002367 1121 792 BP-43529 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2013 LCSET-4804 03/05/2014 TruSeq.v1 RNASEQ 0.984348 359577 0.961373 0.988746 0.762085 25158 1 76 0.00242866 158 0 7.44316e+07 0.0383739 1.16976e+06 7.52788e+07 9.31148e+06 25190 3.69053e+07 0 0.199288 0.988746 0.753508 7.44316e+07 0.00419139 1.62202e+07 9.38072e+06 1.63197e+07 183 1.63451e+07 9.39614e+06 0.00330611 1.6512e+07 50.2539 0.015539 0.993143 0 50.1529 GTEX-111FC-2526-SM-5GZXU 1 B1 6 pieces, includes up to 50% predominantly attached adipose tissue, dermatophytes identified, fibroepithelial polyp 7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1135 781 BP-43507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/12/2013 LCSET-4804 03/05/2014 TruSeq.v1 RNASEQ 0.987374 290086 0.970137 0.990533 0.747564 24608 1 76 0.00243565 133 0 6.58215e+07 0.0296514 453032 6.64506e+07 8.72298e+06 24639 3.27052e+07 0 0.222573 0.990533 0.740486 6.58215e+07 0.00377174 1.44896e+07 7.94554e+06 1.46007e+07 147 1.46374e+07 9.49482e+06 0.00310157 1.46512e+07 50.0237 0.00681758 0.993691 0 50.1908 GTEX-111FC-2926-SM-5GZY7 1 B1 3 pieces, excellent specimen, does include smaller piece of lip, but good composite representation of salivary glands 8.1 Salivary Gland Minor Salivary Gland 0006330 1143 772 BP-43507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/12/2013 LCSET-4804 03/05/2014 TruSeq.v1 RNASEQ 0.986519 333122 0.97371 0.989345 0.799594 23138 1 76 0.00248384 239 0 6.66612e+07 0.0254896 167273 6.73791e+07 8.13546e+06 23161 3.31201e+07 0 0.174116 0.989345 0.791075 6.66612e+07 0.00388452 1.50657e+07 1.63333e+07 1.50904e+07 171 1.51549e+07 1.17996e+07 0.00318218 1.51884e+07 50.0553 0.00248257 0.992172 0 50.041 GTEX-111FC-3026-SM-5GZYJ 3 B1 2 pieces, marked autolysis, clacified debris/fibrous tissue 6.4 Pituitary Pituitary 0000007 1221 696 BP-43507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/12/2013 LCSET-4804 03/05/2014 TruSeq.v1 EXCLUDE 0.986472 278376 0.964725 0.990395 0.831321 24061 1 76 0.00226476 175 0 6.91854e+07 0.0349711 1.59172e+06 6.98564e+07 8.75439e+06 24079 3.43454e+07 0 0.133404 0.990395 0.823336 6.91854e+07 0.00372759 1.52541e+07 6.66689e+06 1.54256e+07 193 1.53965e+07 9.53344e+06 0.00299328 1.5549e+07 50.2465 0.0227856 0.994317 0 50.2796 GTEX-111FC-3126-SM-5GZZ2 1 B1 2 pieces 6.1 Brain Brain - Cortex 0001870 1221 697 BP-43693 RNA Extraction from Paxgene-derived Lysate Plate Based 09/17/2013 LCSET-4804 03/05/2014 TruSeq.v1 RNASEQ 0.990149 245136 0.964973 0.9929 0.80945 24759 1 76 0.00229111 271 0 9.09096e+07 0.0346958 3.33104e+06 9.15597e+07 1.03857e+07 24789 4.51774e+07 0 0.155523 0.9929 0.803703 9.09096e+07 0.00364384 2.00419e+07 1.04967e+07 2.00589e+07 326 1.99483e+07 1.07704e+07 0.0029656 2.03807e+07 50.5361 0.0363811 0.995651 0 50.0212 GTEX-111FC-3326-SM-5GZYV 2 B1 2 pieces 7.1 Brain Brain - Cerebellum 0002037 1221 697 BP-43507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/12/2013 LCSET-4804 03/05/2014 TruSeq.v1 RNASEQ 0.987414 382782 0.951522 0.990794 0.738563 23883 1 76 0.00253525 149 0 7.15337e+07 0.0481175 1.16071e+06 7.21984e+07 9.2524e+06 23907 3.55274e+07 0 0.212959 0.990794 0.731763 7.15337e+07 0.00385783 1.55032e+07 1.15944e+07 1.56175e+07 166 1.56856e+07 8.85677e+06 0.00319429 1.56629e+07 49.9638 0.0160766 0.994173 0 50.1835 GTEX-111VG-0004-SM-58Q85 B1 Blood Whole Blood 0013756 893 BP-38781 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/08/2013 LCSET-4574 01/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-111VG-0004-SM-5DWSX B1 Blood Whole Blood 0013756 893 BP-38781 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/08/2013 GTEx_OM25_Dec_01 01/29/2014 Illumina OMNI SNP Array OMNI GTEX-111VG-0004-SM-6WBTS B1 Blood Whole Blood 0013756 893 BP-38781 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/08/2013 LCSET-6056 09/22/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-111VG-0008-SM-5Q5BG B1 9.2 Skin Cells - Cultured fibroblasts EFO_0002009 1084 BP-39935 RNA isolation_Trizol Manual (Cell Pellet) 06/14/2013 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.99207 312949 0.978244 0.99401 0.870375 18916 1 76 0.00152469 131 0 5.80011e+07 0.0214341 181354 5.83506e+07 4.60951e+06 18924 2.88884e+07 0 0.107869 0.99401 0.865162 5.80011e+07 0.00237269 1.30595e+07 8.67161e+06 1.30623e+07 128 1.30793e+07 1.53521e+07 0.00194786 1.31586e+07 50.1511 0.003108 0.995949 0 50.0054 GTEX-111VG-0326-SM-5GZX7 1 B1 2 pieces; 1 has 20% fat 6.4 Heart Heart - Atrial Appendage 0006631 1006 951 BP-43507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/12/2013 LCSET-4804 03/05/2014 TruSeq.v1 RNASEQ 0.988287 238063 0.979751 0.991944 0.81851 22356 1 76 0.00258903 196 0 7.75035e+07 0.0200514 2.39287e+06 7.81329e+07 9.07601e+06 22371 3.85078e+07 0 0.161241 0.991944 0.811916 7.75035e+07 0.00397898 1.71439e+07 1.54582e+07 1.69857e+07 228 1.70824e+07 8.65615e+06 0.00328144 1.72928e+07 50.306 0.0306257 0.995601 0 49.7683 GTEX-111VG-0526-SM-5N9BW 2 B1 2 pieces; Hashimoto thyroiditis with moderate fibrosis; each has 20% peripheral fat 5.8 Thyroid Thyroid 0002046 1014 943 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.987616 237261 0.959299 0.98842 0.73112 24913 1 76 0.00323683 155 0 7.57861e+07 0.0404014 973319 7.6674e+07 3.83224e+06 24946 3.77052e+07 0 0.228179 0.98842 0.722653 7.57861e+07 0.00381409 1.65616e+07 1.32e+07 1.66863e+07 180 1.65938e+07 8.11138e+06 0.00352523 1.67175e+07 50.1857 0.0126942 0.989224 0 50.1876 GTEX-111VG-0726-SM-5GIDC 2 B1 2 pieces; chronic passive congestion with fibrosis, emphysema; foreign body giant cells consistent with aspiration 5.9 Lung Lung 0008952 1017 940 BP-44261 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4796,LCSET-5161 03/17/2014 TruSeq.v1 RNASEQ 0.978682 357103 0.970551 0.984162 0.715435 25692 1 76 0.0046108 196 0 1.03195e+08 0.0290362 364534 1.04855e+08 9.68357e+06 25740 5.10606e+07 0 0.255116 0.984162 0.704104 1.03195e+08 0.00586664 2.2601e+07 9.46166e+06 2.27237e+07 212 2.2898e+07 1.44698e+07 0.00523523 2.29753e+07 50.0843 0.00347654 0.989642 0 50.1354 GTEX-111VG-1626-SM-5EGIO 1 B1 6 pieces; well trimmed 6.8 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1046 911 BP-43529 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.985547 166139 0.974802 0.989807 0.801531 22081 1 76 0.00253427 179 0 6.43711e+07 0.0249527 269931 6.5034e+07 9.37134e+06 22104 3.19737e+07 0 0.173271 0.989807 0.79336 6.43711e+07 0.0058138 1.40218e+07 8.51406e+06 1.40505e+07 149 1.41146e+07 1.06056e+07 0.00416698 1.42125e+07 50.1727 0.00415062 0.994066 0 50.0511 GTEX-111VG-1926-SM-5GIDO 1 B1 2 pieces; Leydig cell hyperplasia 5.8 Testis Testis 0000473 1061 896 BP-44261 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4796 02/27/2014 TruSeq.v1 RNASEQ 0.988172 236467 0.91576 0.990416 0.707435 32025 1 76 0.00285109 131 0 6.13051e+07 0.0838976 498003 6.18983e+07 7.44242e+06 32074 3.05093e+07 0 0.208326 0.990416 0.700654 6.13051e+07 0.00354181 1.24564e+07 9.58943e+06 1.24834e+07 117 1.25411e+07 9.90533e+06 0.00319567 1.25235e+07 49.9648 0.0080455 0.992659 0 50.054 GTEX-111VG-2226-SM-5N9DU 3 B1 6 pieces; mucosa=3, muscle=1 5.7 Colon Colon - Transverse 0001157 1064 893 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.98815 168260 0.972784 0.989019 0.824944 23446 1 76 0.00303303 163 0 7.53165e+07 0.0268639 1.61655e+06 7.61527e+07 3.54587e+06 23468 3.7483e+07 0 0.14784 0.989019 0.815886 7.53165e+07 0.00359216 1.65633e+07 7.56501e+06 1.66068e+07 202 1.65434e+07 1.02076e+07 0.00331235 1.66924e+07 50.2242 0.0212277 0.98989 0 50.0656 GTEX-111VG-2326-SM-5N9BK 1 B1 2 pieces 7.7 Adipose Tissue Adipose - Subcutaneous 0002190 1083 874 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.991617 236764 0.974651 0.992769 0.782505 23999 1 76 0.00304185 169 0 8.56158e+07 0.0250445 326191 8.62394e+07 4.35646e+06 24024 4.26279e+07 0 0.192146 0.992769 0.776847 8.56158e+07 0.0036112 1.88642e+07 8.00887e+06 1.90324e+07 199 1.89728e+07 1.46257e+07 0.00332619 1.90191e+07 50.0609 0.00378239 0.993921 0 50.222 GTEX-111VG-2426-SM-5GZXD 1 B1 6 pieces; well trimmed 7.4 Skin Skin - Sun Exposed (Lower leg) 0004264 1084 873 BP-43693 RNA Extraction from Paxgene-derived Lysate Plate Based 09/17/2013 LCSET-4804 03/05/2014 TruSeq.v1 RNASEQ 0.989817 221568 0.973519 0.99262 0.788744 23731 1 76 0.00234094 202 0 7.44497e+07 0.026235 406720 7.50032e+07 9.60134e+06 23761 3.70253e+07 0 0.184776 0.99262 0.782923 7.44497e+07 0.00357381 1.62023e+07 7.91076e+06 1.63096e+07 176 1.63419e+07 1.24111e+07 0.00295563 1.6369e+07 50.0413 0.0054227 0.995423 0 50.165 GTEX-111VG-2526-SM-5GZXP 1 B1 4 pieces: 2 are fat free, 2 with 30-40% fat 6.9 Nerve Nerve - Tibial 0001323 1087 870 BP-43693 RNA Extraction from Paxgene-derived Lysate Plate Based 09/17/2013 LCSET-4804 03/05/2014 TruSeq.v1 RNASEQ 0.98941 200416 0.970527 0.99235 0.774488 23775 1 76 0.00235422 159 0 6.92748e+07 0.0291522 247980 6.98088e+07 8.71026e+06 23804 3.44365e+07 0 0.196039 0.99235 0.768563 6.92748e+07 0.00366509 1.52727e+07 7.01318e+06 1.53699e+07 157 1.5401e+07 1.1607e+07 0.00300771 1.54374e+07 50.0589 0.00355228 0.99529 0 50.1586 GTEX-111VG-2626-SM-5GZY2 1 B1 2 pieces; 1 with 10% peripheral fat 8.1 Muscle Muscle - Skeletal 0011907 1088 869 BP-43693 RNA Extraction from Paxgene-derived Lysate Plate Based 09/17/2013 LCSET-4804 03/05/2014 TruSeq.v1 RNASEQ 0.991756 228882 0.983931 0.994212 0.88262 20210 1 76 0.0020535 201 0 8.29808e+07 0.0157784 526174 8.34638e+07 1.11139e+07 20219 4.13115e+07 0 0.101311 0.994212 0.877511 8.29808e+07 0.00293672 1.79074e+07 9.0881e+06 1.77926e+07 210 1.78462e+07 1.94674e+07 0.00249402 1.80428e+07 50.274 0.00630422 0.996669 0 49.8392 GTEX-111YS-0004-SM-58Q7Y B1 Blood Whole Blood 0013756 -121 BP-38789 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/08/2013 LCSET-4574 01/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-111YS-0004-SM-5DWSS B1 Blood Whole Blood 0013756 -121 BP-38789 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/08/2013 GTEx_OM25_Dec_01 01/28/2014 Illumina OMNI SNP Array OMNI GTEX-111YS-0004-SM-6WBTN B1 Blood Whole Blood 0013756 -121 BP-38789 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/08/2013 LCSET-6056 09/21/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-111YS-0006-SM-5NQBE B1 8.2 Blood Whole Blood 0013756 -121 BP-38780 RNA isolation_PAXgene Blood RNA (Manual) 05/08/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.981573 565100 0.965938 0.985108 0.810071 18229 1 76 0.00271236 128 0 7.95187e+07 0.0329545 224915 8.07207e+07 1.11543e+07 18237 3.95001e+07 0 0.155867 0.985108 0.798007 7.95187e+07 0.00586091 1.77504e+07 6.93421e+07 1.80237e+07 148 1.80815e+07 1.79407e+07 0.00428098 1.79763e+07 49.8542 0.00278633 0.988644 0 50.382 GTEX-111YS-0008-SM-5Q5BH B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 299 BP-39935 RNA isolation_Trizol Manual (Cell Pellet) 06/14/2013 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.989266 439623 0.976082 0.993076 0.860144 20183 1 76 0.00150431 147 0 7.06687e+07 0.0235661 259480 7.11614e+07 5.0448e+06 20193 3.51216e+07 0 0.115938 0.993076 0.854189 7.06687e+07 0.00256993 1.57133e+07 1.08286e+07 1.57788e+07 150 1.58414e+07 1.85485e+07 0.00203507 1.59281e+07 50.1365 0.00364636 0.996887 0 50.104 GTEX-111YS-0126-SM-5987T 1 B1 3 fragmented pieces; up to 2.5mm external fat on 2 of the 3 pieces 8.1 Adrenal Gland Adrenal Gland 0002369 101 788 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.986212 223266 0.978464 0.99094 0.828669 21741 1 76 0.00275093 153 0 7.18762e+07 0.0212607 1.38842e+06 7.25334e+07 1.58636e+07 21762 3.56979e+07 0 0.149795 0.99094 0.821161 7.18762e+07 0.00646972 1.60453e+07 1.19712e+07 1.56804e+07 174 1.57469e+07 1.03797e+07 0.00460146 1.62688e+07 50.8151 0.0191418 0.995667 0 49.4249 GTEX-111YS-0326-SM-5GZZ3 1 B1 2 pieces, 1 with 50% external fat; hypertrophied myofibers 8.5 Heart Heart - Atrial Appendage 0006631 120 769 BP-43693 RNA Extraction from Paxgene-derived Lysate Plate Based 09/17/2013 LCSET-4804 03/05/2014 TruSeq.v1 RNASEQ 0.987427 263296 0.982231 0.990372 0.836055 20649 1 76 0.00216987 161 0 7.24214e+07 0.0174988 1.66259e+06 7.31255e+07 8.41441e+06 20663 3.59623e+07 0 0.146176 0.990372 0.828006 7.24214e+07 0.0037906 1.54162e+07 1.90624e+07 1.54679e+07 190 1.53104e+07 1.14008e+07 0.00297783 1.57638e+07 50.7295 0.0227362 0.993318 0 50.0837 GTEX-111YS-0426-SM-5987O 1 B1 2 small irregular pieces (3x4 & 9x4mm) 8 Heart Heart - Left Ventricle 0006566 124 765 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.988241 242058 0.984563 0.991696 0.848819 20100 1 76 0.00265771 195 0 7.9992e+07 0.0152273 1.62036e+06 8.06618e+07 1.43258e+07 20111 3.97851e+07 0 0.135743 0.991696 0.84177 7.9992e+07 0.00573418 1.78214e+07 2.34339e+07 1.70843e+07 248 1.70527e+07 1.11808e+07 0.00419058 1.80379e+07 51.4037 0.0200882 0.995151 0 48.9441 GTEX-111YS-0526-SM-5GZXJ 1 B1 6 pieces; up to 0.7mm adventitial fat 7.9 Blood Vessel Artery - Aorta 0001496 128 761 BP-43507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/12/2013 LCSET-4804 03/05/2014 TruSeq.v1 RNASEQ 0.985152 427352 0.970772 0.989239 0.848449 20785 1 76 0.00211753 137 0 6.24099e+07 0.028817 134238 6.30888e+07 7.98078e+06 20795 3.09755e+07 0 0.122323 0.989239 0.839319 6.24099e+07 0.00387056 1.34344e+07 9.50538e+06 1.35305e+07 150 1.35725e+07 1.231e+07 0.00299042 1.36433e+07 50.13 0.00212776 0.993326 0 50.1781 GTEX-111YS-0626-SM-5GZXV 1 B1 2 small, irregular, fragmented pieces (7x5 & 5x5mm) 8.1 Lung Lung 0008952 133 756 BP-43507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/12/2013 LCSET-4804 03/05/2014 TruSeq.v1 RNASEQ 0.990432 250685 0.97595 0.993117 0.822131 23464 1 76 0.00225066 204 0 7.85997e+07 0.0236282 299794 7.91445e+07 1.04561e+07 23491 3.91023e+07 0 0.153818 0.993117 0.816472 7.85997e+07 0.00326642 1.74598e+07 6.50254e+06 1.7533e+07 207 1.7576e+07 1.43191e+07 0.00275717 1.76208e+07 50.0636 0.00378793 0.995802 0 50.1047 GTEX-111YS-0726-SM-5GZY8 1 B1 3 small, irregular, fragmented pieces; nodular; smallest piece is largely fat and fibrous stroma 6.4 Thyroid Thyroid 0002046 137 752 BP-43507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/12/2013 LCSET-4804 03/05/2014 TruSeq.v1 RNASEQ 0.987943 277476 0.968705 0.991626 0.749333 23810 1 76 0.00225897 138 0 6.92371e+07 0.0310365 323235 6.98217e+07 9.28865e+06 23841 3.43987e+07 0 0.219372 0.991626 0.743058 6.92371e+07 0.00360194 1.50893e+07 6.89711e+06 1.51953e+07 156 1.52293e+07 9.97522e+06 0.00292796 1.52959e+07 50.109 0.00462943 0.99531 0 50.1749 GTEX-111YS-0826-SM-5GZYK 1 B1 6 pieces; all muscularis 7.9 Esophagus Esophagus - Gastroesophageal Junction 0004550 143 746 BP-43507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/12/2013 LCSET-4804 03/05/2014 TruSeq.v1 RNASEQ 0.989365 219409 0.97816 0.992712 0.830223 21716 1 76 0.00215422 135 0 6.69668e+07 0.0215227 464279 6.74585e+07 8.453e+06 21735 3.32964e+07 0 0.147937 0.992712 0.824172 6.69668e+07 0.00331924 1.4579e+07 6.86293e+06 1.4639e+07 164 1.46485e+07 1.14806e+07 0.00273477 1.47838e+07 50.2298 0.00688244 0.99606 0 50.1027 GTEX-111YS-0926-SM-5EGGI 1 B1 6 pieces, all mucosa 9.7 Esophagus Esophagus - Mucosa 0006920 147 742 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.983602 238033 0.977702 0.988212 0.841088 21898 1 76 0.00234604 145 0 6.80981e+07 0.0218935 232264 6.89104e+07 1.07388e+07 21909 3.38125e+07 0 0.136614 0.988212 0.831174 6.80981e+07 0.00532311 1.53579e+07 1.16814e+07 1.54451e+07 149 1.55403e+07 1.43936e+07 0.00382763 1.55685e+07 50.0454 0.00337052 0.992823 0 50.1415 GTEX-111YS-1026-SM-5GZYE 1 B1 6 small pieces of muscularis 8.5 Esophagus Esophagus - Muscularis 0004648 148 741 BP-43693 RNA Extraction from Paxgene-derived Lysate Plate Based 09/17/2013 LCSET-4804 03/05/2014 TruSeq.v1 RNASEQ 0.991642 225759 0.979138 0.993988 0.844737 21230 1 76 0.00208524 215 0 7.66952e+07 0.0205058 537242 7.7159e+07 9.53065e+06 21243 3.81714e+07 0 0.134401 0.993988 0.839658 7.66952e+07 0.00308594 1.66276e+07 7.46658e+06 1.66785e+07 215 1.66762e+07 1.37476e+07 0.00258441 1.68021e+07 50.188 0.00696279 0.996334 0 50.0764 GTEX-111YS-1126-SM-5GZYQ 1 B1 6 pieces, well preserved mucosa and muscularis 6.4 Stomach Stomach 0000945 151 738 BP-43693 RNA Extraction from Paxgene-derived Lysate Plate Based 09/17/2013 LCSET-4804 03/05/2014 TruSeq.v1 RNASEQ 0.984822 171579 0.981572 0.988188 0.844279 21354 1 76 0.00211332 261 0 6.39172e+07 0.0181074 716025 6.46812e+07 7.80886e+06 21364 3.17623e+07 0 0.137293 0.988188 0.834307 6.39172e+07 0.00368239 1.46424e+07 5.60407e+07 1.46713e+07 186 1.46787e+07 1.48048e+07 0.00289518 1.4847e+07 50.285 0.0110701 0.991555 0 50.0493 GTEX-111YS-1226-SM-5EGGJ 1 B1 2 somewhat fragmented pieces 6.8 Pancreas Pancreas 0001150 154 735 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.984299 189035 0.97993 0.989304 0.859829 20863 1 76 0.00248968 95 0 6.77759e+07 0.0198148 227322 6.85087e+07 1.09267e+07 20876 3.36443e+07 0 0.120101 0.989304 0.850632 6.77759e+07 0.00567461 1.55536e+07 2.14648e+07 1.56731e+07 109 1.57045e+07 2.03565e+07 0.00407409 1.58585e+07 50.244 0.00331815 0.994309 0 50.1913 GTEX-111YS-1326-SM-5EGGK 0 B1 2 pieces 7.9 Adipose Tissue Adipose - Visceral (Omentum) 0010414 156 733 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.986992 183244 0.978765 0.991398 0.836041 21863 1 76 0.00224036 164 0 7.22957e+07 0.0209369 463725 7.2923e+07 1.07118e+07 21876 3.59097e+07 0 0.142725 0.991398 0.828849 7.22957e+07 0.005466 1.59168e+07 7.68051e+06 1.59419e+07 181 1.59776e+07 1.24026e+07 0.00384602 1.61787e+07 50.3128 0.0063591 0.995803 0 50.0394 GTEX-111YS-1426-SM-5GID8 0 B1 6 pieces of well preserved mucosa with several lymphoid nodules in the 3 largest pieces (marked) 7 Small Intestine Small Intestine - Terminal Ileum 0001211 158 731 BP-44261 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4796 02/27/2014 TruSeq.v1 RNASEQ 0.989536 177095 0.974669 0.991747 0.8186 21371 1 76 0.00301279 171 0 7.05849e+07 0.024938 1.01878e+06 7.11722e+07 8.85453e+06 21387 3.51380e+07 0 0.156069 0.991747 0.811844 7.05849e+07 0.00358853 1.56946e+07 1.26722e+07 1.5741e+07 197 1.56914e+07 9.76906e+06 0.00330002 1.589e+07 50.3144 0.0143143 0.993959 0 50.0738 GTEX-111YS-1526-SM-5GZYW 0 B1 6 pieces; well trimmed 7.5 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 163 726 BP-43507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/12/2013 LCSET-4804 03/05/2014 TruSeq.v1 RNASEQ 0.986973 264566 0.972145 0.990399 0.814304 22997 1 76 0.00224498 159 0 6.35299e+07 0.0276326 415862 6.41458e+07 8.37761e+06 23014 3.15749e+07 0 0.15784 0.990399 0.806486 6.35299e+07 0.00354367 1.3916e+07 7.50297e+06 1.40251e+07 151 1.40504e+07 1.12046e+07 0.00289208 1.41013e+07 50.0903 0.00648308 0.993824 0 50.1952 GTEX-111YS-1626-SM-5GZZ9 1 B1 6 pieces, 4 full thickness, 2 without mucosa 7.8 Colon Colon - Transverse 0001157 168 721 BP-43507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/12/2013 LCSET-4804 03/05/2014 TruSeq.v1 RNASEQ 0.989661 247548 0.976017 0.992581 0.826617 21867 1 76 0.00211476 161 0 6.85467e+07 0.0236548 414492 6.90591e+07 8.80253e+06 21887 3.40860e+07 0 0.1494 0.992581 0.820485 6.85467e+07 0.00329569 1.49185e+07 7.10625e+06 1.49285e+07 166 1.49506e+07 1.20372e+07 0.00270349 1.50848e+07 50.2234 0.00600199 0.995501 0 50.0168 GTEX-111YS-1726-SM-5GIED 1 B1 2 pieces; glandular hyperplasia 6.3 Prostate Prostate 0002367 179 710 BP-44261 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4796 02/27/2014 TruSeq.v1 RNASEQ 0.989478 234680 0.969914 0.992026 0.763299 23619 1 76 0.00272966 123 0 6.14685e+07 0.0298548 305261 6.19625e+07 7.66204e+06 23648 3.05764e+07 0 0.206615 0.992026 0.757213 6.14685e+07 0.00340165 1.34872e+07 6.38604e+06 1.35141e+07 141 1.353e+07 8.62591e+06 0.00306479 1.36214e+07 50.1682 0.00492654 0.994575 0 50.0498 GTEX-111YS-1826-SM-5GIEP 0 B1 6 pieces; muscularis (target) with up to 1 mm external fat 7.8 Colon Colon - Sigmoid 0001159 182 707 BP-44261 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4796 02/27/2014 TruSeq.v1 RNASEQ 0.989401 214042 0.975493 0.99245 0.83029 21488 1 76 0.00257376 141 0 6.28188e+07 0.0241792 393772 6.32966e+07 8.04969e+06 21503 3.1242e+07 0 0.145203 0.99245 0.824021 6.28188e+07 0.00321704 1.36667e+07 6.10714e+06 1.36929e+07 147 1.37276e+07 1.09685e+07 0.00289441 1.38115e+07 50.1524 0.00622106 0.995499 0 50.0479 GTEX-111YS-1926-SM-5GICC 0 B1 2 pieces; stromal and ductal gynecomastoid hyperplasia; about 50% fat 7.2 Breast Breast - Mammary Tissue 0008367 188 701 BP-44261 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4796 02/27/2014 TruSeq.v1 RNASEQ 0.989692 208577 0.968128 0.992355 0.773188 24558 1 76 0.00264646 172 0 8.23943e+07 0.0315794 363339 8.3029e+07 1.07096e+07 24599 4.09918e+07 0 0.19494 0.992355 0.767277 8.23943e+07 0.0034012 1.80617e+07 8.23065e+06 1.82425e+07 195 1.82519e+07 1.29889e+07 0.00302282 1.82625e+07 50.0145 0.00437605 0.995018 0 50.249 GTEX-111YS-2026-SM-5EGGL 0 B1 2 pieces; spermatogenesis 6.8 Testis Testis 0000473 189 700 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.985318 253033 0.926817 0.989435 0.723004 32311 1 76 0.00236531 130 0 6.92451e+07 0.0728769 601648 6.99845e+07 9.70163e+06 32360 3.43966e+07 0 0.203813 0.989435 0.715366 6.92451e+07 0.00535016 1.4351e+07 1.07948e+07 1.43696e+07 138 1.44604e+07 1.1099e+07 0.00385152 1.45107e+07 50.0868 0.00859688 0.993553 0 50.0325 GTEX-111YS-2126-SM-5EGGM 0 B1 2 pieces; 50% internal edematous stroma and fat 7.2 Nerve Nerve - Tibial 0001323 289 600 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.980099 162181 0.965839 0.985818 0.731066 23488 1 76 0.00246162 140 0 6.14178e+07 0.0339015 222732 6.23014e+07 9.96449e+06 23522 3.04443e+07 0 0.234774 0.985818 0.720698 6.14178e+07 0.00587615 1.34249e+07 5.94265e+06 1.3557e+07 133 1.36457e+07 9.00653e+06 0.00415898 1.36707e+07 50.0457 0.00357507 0.991537 0 50.2448 GTEX-111YS-2226-SM-5987P 1 B1 2 pieces; extensive medial calcification (marked); no intimal plaques 7.8 Blood Vessel Artery - Tibial 0007610 292 597 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.983152 253878 0.976322 0.989612 0.846981 20927 1 76 0.00250769 136 0 6.48482e+07 0.0232456 197829 6.55289e+07 1.54025e+07 20936 3.21379e+07 0 0.129341 0.989612 0.838183 6.48482e+07 0.00735696 1.39237e+07 6.71898e+06 1.40148e+07 141 1.41446e+07 1.28753e+07 0.0049165 1.41844e+07 50.0702 0.00301896 0.996073 0 50.1629 GTEX-111YS-2326-SM-5987L 0 B1 2 pieces 7.1 Muscle Muscle - Skeletal 0011907 294 595 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.985609 253081 0.982708 0.990696 0.877478 20121 1 76 0.00242926 142 0 7.26910e+07 0.0170065 1.2682e+06 7.33737e+07 1.57549e+07 20128 3.60905e+07 0 0.105229 0.990696 0.869314 7.26910e+07 0.00630527 1.59868e+07 9.38516e+06 1.57339e+07 164 1.5832e+07 1.52228e+07 0.00435731 1.62244e+07 50.6121 0.0172841 0.995784 0 49.6013 GTEX-111YS-2426-SM-5GZZQ 0 B1 3 small irregular pieces 6.6 Adipose Tissue Adipose - Subcutaneous 0002190 296 593 BP-43693 RNA Extraction from Paxgene-derived Lysate Plate Based 09/17/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.990443 250797 0.974452 0.99289 0.799713 21965 1 76 0.0021321 159 0 6.82595e+07 0.0252337 457318 6.87482e+07 7.72479e+06 21987 3.3965e+07 0 0.174739 0.99289 0.794027 6.82595e+07 0.00339647 1.50473e+07 9.3527e+06 1.5104e+07 165 1.51442e+07 1.09416e+07 0.00276272 1.51718e+07 50.0454 0.00665207 0.995338 0 50.0941 GTEX-1122O-0003-SM-5Q5DL B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -77 BP-40621 RNA isolation_Trizol Manual (Cell Pellet) 07/10/2013 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.991067 1.0695e+06 0.962693 0.993511 0.802731 22185 1 76 0.00219526 217 0 9.45262e+07 0.0369627 461442 9.51436e+07 1.46674e+07 22216 4.70473e+07 0 0.159962 0.993511 0.797522 9.45262e+07 0.00332494 2.08341e+07 1.603e+07 2.09383e+07 235 2.09902e+07 2.13073e+07 0.00275871 2.10055e+07 50.0182 0.00484995 0.995954 0 50.1247 GTEX-1122O-0004-SM-58Q7O B1 Blood Whole Blood 0013756 -77 BP-38824 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/09/2013 LCSET-4574 01/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-1122O-0004-SM-5DWSJ B1 Blood Whole Blood 0013756 -77 BP-38824 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/09/2013 GTEx_OM25_Dec_01 01/28/2014 Illumina OMNI SNP Array OMNI GTEX-1122O-0004-SM-6WBTE B1 Blood Whole Blood 0013756 -77 BP-38824 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/09/2013 LCSET-6056 09/22/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-1122O-0005-SM-5O99J B1 7.6 Blood Whole Blood 0013756 -77 BP-38883 RNA isolation_PAXgene Blood RNA (Manual) 05/10/2013 LCSET-4909 03/20/2014 TruSeq.v1 RNASEQ 0.986466 912057 0.944916 0.990744 0.777156 18928 1 76 0.00230212 124 0 7.1748e+07 0.0545957 207142 7.24183e+07 1.04949e+07 18944 3.56203e+07 0 0.16776 0.990744 0.769962 7.1748e+07 0.00416304 1.53565e+07 4.43056e+07 1.55623e+07 142 1.56396e+07 1.38583e+07 0.00322856 1.56031e+07 49.9416 0.00286035 0.995023 0 50.3328 GTEX-1122O-0008-SM-5QGR2 B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 128 BP-40621 RNA isolation_Trizol Manual (Cell Pellet) 07/10/2013 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.994467 223519 0.982928 0.995624 0.887028 18244 1 76 0.00157106 138 0 5.72119e+07 0.0167516 97497 5.74634e+07 4.05372e+06 18248 2.85207e+07 0 0.0958995 0.995624 0.883146 5.72119e+07 0.00232476 1.29548e+07 5.9646e+06 1.30058e+07 127 1.30175e+07 1.55492e+07 0.00194747 1.30129e+07 49.9913 0.00169668 0.996781 0 50.0983 GTEX-1122O-0126-SM-5GICA 0 B1 2 pieces, patchy bronchopneumonia 7.6 Lung Lung 0008952 68 935 BP-44261 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4796 02/27/2014 TruSeq.v1 RNASEQ 0.989996 207253 0.974001 0.992561 0.826045 23407 1 76 0.00272401 164 0 7.47401e+07 0.0256564 309042 7.53003e+07 1.01469e+07 23430 3.71922e+07 0 0.147957 0.992561 0.8199 7.47401e+07 0.00326926 1.65239e+07 6.80277e+06 1.6644e+07 194 1.66818e+07 1.31227e+07 0.00299593 1.66689e+07 49.9807 0.00410413 0.995127 0 50.181 GTEX-1122O-0226-SM-5N9DA 0 B1 2 pieces, some nodular change 6.2 Thyroid Thyroid 0002046 51 952 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.99063 197371 0.970389 0.991624 0.786171 23007 1 76 0.00291743 158 0 7.26916e+07 0.0294171 469295 7.33056e+07 3.25426e+06 23032 3.62041e+07 0 0.184218 0.991624 0.779586 7.26916e+07 0.00344091 1.59165e+07 7.56613e+06 1.60384e+07 179 1.59063e+07 9.69051e+06 0.00317891 1.61169e+07 50.3289 0.0064019 0.992617 0 50.1907 GTEX-1122O-0326-SM-5H124 0 B1 2 pieces, one is ~30% adipose tissue 8.7 Adrenal Gland Adrenal Gland 0002369 38 965 BP-43693 RNA Extraction from Paxgene-derived Lysate Plate Based 09/17/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.990778 310502 0.97631 0.993351 0.821705 23920 1 76 0.00230703 271 0 9.43864e+07 0.0233271 1.02398e+06 9.50182e+07 1.29775e+07 23948 4.69722e+07 0 0.154605 0.993351 0.816242 9.43864e+07 0.00317155 2.0873e+07 1.24889e+07 2.08626e+07 274 2.09495e+07 1.5479e+07 0.00273817 2.10052e+07 50.0663 0.0107766 0.995925 0 49.9875 GTEX-1122O-0426-SM-5H12G 0 B1 2 pieces, both with attachment of adipose tissue and nerve up to 1.45mm thick, atherosclerosis with compromise of the lumen ~40% 7.7 Blood Vessel Artery - Coronary 0001621 63 940 BP-43693 RNA Extraction from Paxgene-derived Lysate Plate Based 09/17/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.990352 196630 0.976134 0.993079 0.850295 21204 1 76 0.00193909 143 0 6.82569e+07 0.0234723 322122 6.87326e+07 8.65984e+06 21220 3.39574e+07 0 0.125839 0.993079 0.84441 6.82569e+07 0.00309214 1.45213e+07 5.39442e+06 1.46944e+07 160 1.46907e+07 1.39679e+07 0.00251403 1.47031e+07 50.021 0.0046866 0.995806 0 50.2963 GTEX-1122O-0526-SM-5N9DM 0 B1 2 pieces 7.8 Spleen Spleen 0002106 46 957 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.991574 198578 0.964085 0.992349 0.771153 24518 1 76 0.00325312 161 0 8.36309e+07 0.0348934 359502 8.42757e+07 3.91559e+06 24551 4.16329e+07 0 0.192933 0.992349 0.765253 8.36309e+07 0.00368861 1.83965e+07 9.51827e+06 1.84768e+07 202 1.84495e+07 1.30529e+07 0.00347069 1.84878e+07 50.0519 0.00426579 0.993124 0 50.1089 GTEX-1122O-0626-SM-5N9B9 0 B1 2 pieces, 30-50% fat, interstitial fibrosis 8.6 Heart Heart - Atrial Appendage 0006631 60 943 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.992927 244989 0.976755 0.993655 0.831393 21671 1 76 0.00284322 199 0 8.51618e+07 0.0229706 1.49421e+06 8.57056e+07 3.99975e+06 21689 4.24402e+07 0 0.145362 0.993655 0.826118 8.51618e+07 0.00328089 1.82444e+07 1.6399e+07 1.8368e+07 236 1.82115e+07 1.4677e+07 0.0030619 1.8466e+07 50.3469 0.0174342 0.994383 0 50.1687 GTEX-1122O-0726-SM-5GIEV 1 B1 2 pieces, minimal attached and internal fat 6 Pancreas Pancreas 0001150 55 948 BP-44261 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4796 02/27/2014 TruSeq.v1 RNASEQ 0.991492 284734 0.975735 0.993507 0.838041 22174 1 76 0.00286843 127 0 9.55623e+07 0.0239078 261116 9.61868e+07 1.14208e+07 22197 4.75741e+07 0 0.137694 0.993507 0.8326 9.55623e+07 0.00347573 2.17756e+07 2.46343e+07 2.20764e+07 161 2.20292e+07 2.61505e+07 0.00317146 2.20089e+07 49.9769 0.00271468 0.995522 0 50.343 GTEX-1122O-0826-SM-5GICV 0 B1 2 pieces, both with attached adipose tissue (5-10% on one, 25% on second) 8 Heart Heart - Left Ventricle 0006566 62 941 BP-44261 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4796 02/27/2014 TruSeq.v1 RNASEQ 0.991328 176137 0.982864 0.993407 0.851392 20223 1 76 0.00290912 195 0 7.07418e+07 0.0169145 1.43384e+06 7.12113e+07 8.85436e+06 20230 3.52319e+07 0 0.131471 0.993407 0.845779 7.07418e+07 0.00343361 1.55122e+07 1.77662e+07 1.53069e+07 203 1.5228e+07 1.09743e+07 0.00317082 1.57178e+07 50.7914 0.0201349 0.995486 0 49.6669 GTEX-1122O-0926-SM-5N9C9 0 B1 2 pieces, focal perivascular collection of lymphocytes 5.8 Adipose Tissue Adipose - Visceral (Omentum) 0010414 93 910 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 EXCLUDE 0.992568 206359 0.973996 0.993597 0.838529 21380 1 76 0.00284954 160 0 7.53652e+07 0.0256724 742097 7.58508e+07 3.68956e+06 21391 3.75422e+07 0 0.135467 0.993597 0.83316 7.53652e+07 0.00350215 1.63552e+07 1.0471e+07 1.65428e+07 202 1.64104e+07 1.1268e+07 0.00317551 1.65645e+07 50.2337 0.00978364 0.994626 0 50.2852 GTEX-1122O-0926-SM-9YFLC 0 B1 2 pieces, focal perivascular collection of lymphocytes 7.4 Adipose Tissue Adipose - Visceral (Omentum) 0010414 93 910 BP-61198 RNA Extraction from Paxgene-derived Lysate Plate Based 03/03/2015 LCSET-7536,LCSET-7766 08/22/2015 TruSeq.v1 RNASEQ 0.993504 231037 0.976414 0.995017 0.841357 21772 1 76 0.00253773 204 0 8.20962e+07 0.0233478 779247 8.25073e+07 5.20863e+06 21787 4.09231e+07 0 0.135056 0.995017 0.837165 8.20962e+07 0.00345107 1.79864e+07 9.41984e+06 1.81584e+07 251 1.80799e+07 1.30326e+07 0.00299371 1.81816e+07 50.1401 0.00944458 0.996529 0 50.2381 GTEX-1122O-1026-SM-9WYSF 0 B1 6 pieces, well trimmed 7.5 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 94 909 BP-61198 RNA Extraction from Paxgene-derived Lysate Plate Based 03/03/2015 LCSET-7430 07/22/2015 TruSeq.v1 RNASEQ 0.992994 228166 0.968832 0.994594 0.78811 22690 1 76 0.00243091 197 0 7.93505e+07 0.0309985 525716 7.97818e+07 5.283e+06 22713 3.95338e+07 0 0.180722 0.994594 0.783849 7.93505e+07 0.00454839 1.72891e+07 8.86082e+06 1.74724e+07 192 1.74489e+07 1.25898e+07 0.00348795 1.74377e+07 49.9839 0.00658942 0.996194 0 50.2636 GTEX-1122O-1126-SM-5NQ8X 0 B1 7 pieces 7.1 Blood Vessel Artery - Aorta 0001496 64 939 BP-43529 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2013 LCSET-4906 03/22/2014 TruSeq.v1 RNASEQ 0.993015 171786 0.977001 0.994572 0.865349 19854 1 76 0.00181538 127 0 5.74967e+07 0.0226042 147349 5.78105e+07 4.32817e+06 19860 2.86166e+07 0 0.111652 0.994572 0.860651 5.74967e+07 0.00275927 1.24818e+07 4.45191e+06 1.2539e+07 142 1.24813e+07 1.18121e+07 0.00228659 1.26305e+07 50.2971 0.00254883 0.996129 0 50.1143 GTEX-1122O-1226-SM-5H113 0 B1 2 pieces, predominantly fatty with 10-20% fibrous stroma and ductal/lobular elements, microcalciifcations 6.7 Breast Breast - Mammary Tissue 0008367 93 910 BP-43693 RNA Extraction from Paxgene-derived Lysate Plate Based 09/17/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.990493 226915 0.973776 0.992659 0.801922 24127 1 76 0.00218512 207 0 8.09968e+07 0.0257231 378065 8.15958e+07 9.87819e+06 24147 4.03093e+07 0 0.171855 0.992659 0.796035 8.09968e+07 0.00321429 1.78112e+07 8.07477e+06 1.79698e+07 207 1.79636e+07 1.35387e+07 0.00269858 1.79821e+07 50.0258 0.00463339 0.994826 0 50.2215 GTEX-1122O-1326-SM-5H11F 0 B1 6 pieces, good specimen, well preserved, well trimmed, good representation of lymphoid tissue 7.3 Small Intestine Small Intestine - Terminal Ileum 0001211 103 900 BP-43693 RNA Extraction from Paxgene-derived Lysate Plate Based 09/17/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.989787 240390 0.973952 0.992099 0.800074 22732 1 76 0.00259958 177 0 7.43613e+07 0.0256049 785818 7.49535e+07 9.37796e+06 22755 3.70046e+07 0 0.173878 0.992099 0.793752 7.43613e+07 0.00378479 1.65479e+07 1.09126e+07 1.65867e+07 190 1.65807e+07 1.07388e+07 0.0031908 1.67164e+07 50.2037 0.0104841 0.99441 0 50.0585 GTEX-1122O-1426-SM-5H11R 0 B1 6 pieces, well trimmed 7.2 Colon Colon - Sigmoid 0001159 106 897 BP-43693 RNA Extraction from Paxgene-derived Lysate Plate Based 09/17/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.991474 268009 0.974955 0.993701 0.816593 22839 1 76 0.00204931 206 0 8.07388e+07 0.0248099 452708 8.12507e+07 9.74939e+06 22862 4.01892e+07 0 0.158362 0.993701 0.811449 8.07388e+07 0.00311188 1.75038e+07 7.0907e+06 1.76506e+07 206 1.76363e+07 1.34422e+07 0.0025794 1.76903e+07 50.0765 0.00557175 0.995927 0 50.2088 GTEX-1122O-1526-SM-5N9CL 1 B1 6 pieces, predominantly mucosa and submucosa, few with attached portion of muscularis 7.8 Colon Colon - Transverse 0001157 111 892 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.991552 190647 0.972045 0.992618 0.801453 22634 1 76 0.00313044 197 0 7.04263e+07 0.0275368 1.14169e+06 7.095e+07 3.67084e+06 22657 3.50743e+07 0 0.170592 0.992618 0.795537 7.04263e+07 0.00362658 1.56093e+07 9.97589e+06 1.57085e+07 171 1.56426e+07 1.06439e+07 0.00337824 1.57434e+07 50.1605 0.0160915 0.993684 0 50.1584 GTEX-1122O-1626-SM-5N9CX 1 B1 6 pieces, well trimmed, minute focus of squamous epithelium 8.3 Esophagus Esophagus - Muscularis 0004648 116 887 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.993113 185709 0.978129 0.993861 0.838444 21374 1 76 0.00271942 174 0 7.52063e+07 0.0215413 479033 7.56709e+07 3.55529e+06 21392 3.74781e+07 0 0.139685 0.993861 0.833297 7.52063e+07 0.00316601 1.62015e+07 6.0328e+06 1.63072e+07 183 1.62254e+07 1.38323e+07 0.00294255 1.63376e+07 50.1722 0.00633048 0.994608 0 50.1625 GTEX-1122O-1726-SM-5GICM 0 B1 6 pieces 8 Esophagus Esophagus - Mucosa 0006920 118 885 BP-44261 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4796 02/27/2014 TruSeq.v1 RNASEQ 0.989926 208207 0.976614 0.991877 0.834785 21417 1 76 0.00290464 169 0 7.15011e+07 0.0228934 389864 7.20867e+07 8.80921e+06 21432 3.56025e+07 0 0.141829 0.991877 0.828004 7.15011e+07 0.00340962 1.60386e+07 1.12965e+07 1.60355e+07 168 1.60574e+07 1.3959e+07 0.00315663 1.61494e+07 50.1427 0.00540826 0.993827 0 49.9951 GTEX-1122O-1826-SM-5EGIP 0 B1 6 pieces, well trimmed, few submucosal glands 7.1 Esophagus Esophagus - Gastroesophageal Junction 0004550 119 884 BP-43529 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.985626 177547 0.973686 0.989981 0.813688 21759 1 76 0.00228893 144 0 6.12567e+07 0.0260382 366145 6.18766e+07 9.44206e+06 21779 3.04262e+07 0 0.159998 0.989981 0.805536 6.12567e+07 0.00526249 1.32785e+07 5.87592e+06 1.33476e+07 141 1.33662e+07 1.04216e+07 0.00376917 1.35103e+07 50.2681 0.00591734 0.994336 0 50.1297 GTEX-1122O-1926-SM-5EGIQ 1 B1 6 pieces, mucosa and submucosa 6.5 Stomach Stomach 0000945 123 880 BP-43529 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.977454 153185 0.980666 0.982983 0.85076 21247 1 76 0.00255349 282 0 5.99662e+07 0.0189288 865151 6.10043e+07 1.01822e+07 21257 2.97409e+07 0 0.129906 0.982983 0.836283 5.99662e+07 0.00603222 1.3686e+07 6.40967e+07 1.37704e+07 195 1.3775e+07 1.30443e+07 0.00428307 1.39962e+07 50.3982 0.0141818 0.988512 0 50.1537 GTEX-1122O-2026-SM-5NQ91 0 B1 2 pieces 6.3 Adipose Tissue Adipose - Subcutaneous 0002190 126 877 BP-43529 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2013 LCSET-4906 03/22/2014 TruSeq.v1 EXCLUDE 0.993137 181433 0.974009 0.994586 0.801538 22458 1 76 0.00203331 210 0 8.04871e+07 0.0257492 628967 8.09252e+07 5.62624e+06 22484 4.00809e+07 0 0.172471 0.994586 0.797198 8.04871e+07 0.00295568 1.7631e+07 8.623e+06 1.77676e+07 218 1.76864e+07 1.18722e+07 0.00249382 1.7827e+07 50.198 0.0077722 0.996034 0 50.193 GTEX-1122O-2026-SM-9YFMG 0 B1 2 pieces 6.7 Adipose Tissue Adipose - Subcutaneous 0002190 126 877 BP-61198 RNA Extraction from Paxgene-derived Lysate Plate Based 03/03/2015 LCSET-7536,LCSET-7767 08/22/2015 TruSeq.v1 RNASEQ 0.9926 342294 0.97453 0.994454 0.810293 24021 1 76 0.00299046 378 0 1.25677e+08 0.025219 1.16464e+06 1.26378e+08 1.4482e+07 24053 6.2613e+07 0 0.164237 0.994454 0.805798 1.25677e+08 0.00411436 2.75947e+07 1.3424e+07 2.77528e+07 363 2.77159e+07 1.91536e+07 0.00355136 2.78531e+07 50.1235 0.00921553 0.996308 0 50.1428 GTEX-1122O-2126-SM-5EGIR 0 B1 6 pieces, includes 10-30% attached and internal fat, squamous epithelium measures 36 to 45 microns 7.1 Skin Skin - Sun Exposed (Lower leg) 0004264 128 875 BP-43529 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.981712 190754 0.97417 0.987252 0.872227 21359 1 76 0.00230753 168 0 5.98722e+07 0.0256446 276523 6.06453e+07 9.14466e+06 21369 2.96913e+07 0 0.101944 0.987252 0.861107 5.98722e+07 0.00596013 1.2838e+07 6.9178e+06 1.30367e+07 155 1.30794e+07 1.0942e+07 0.00412358 1.31155e+07 50.069 0.00455968 0.992791 0 50.3838 GTEX-1122O-2326-SM-9YFL9 1 B1 4 pieces, intimal thickening/early atherosclerotic change 6.7 Blood Vessel Artery - Tibial 0007610 130 873 BP-61198 RNA Extraction from Paxgene-derived Lysate Plate Based 03/03/2015 LCSET-7536 08/08/2015 TruSeq.v1 RNASEQ 0.993045 124502 0.975554 0.994819 0.845436 19918 1 76 0.00233418 121 0 5.25689e+07 0.0241014 244120 5.28426e+07 1.93892e+06 19926 2.61844e+07 0 0.130118 0.994819 0.841056 5.25689e+07 0.00359675 1.12697e+07 3.60957e+06 1.1382e+07 130 1.13568e+07 9.98995e+06 0.00296434 1.13859e+07 50.0641 0.00461975 0.996593 0 50.2479 GTEX-1122O-2426-SM-5GIDN 1 B1 2 pieces 7 Muscle Muscle - Skeletal 0011907 131 872 BP-44261 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4796 02/27/2014 TruSeq.v1 RNASEQ 0.991915 182569 0.980911 0.994101 0.869498 19070 1 76 0.00254273 149 0 6.2735e+07 0.0188662 716038 6.31072e+07 7.88763e+06 19077 3.1241e+07 0 0.111413 0.994101 0.864369 6.2735e+07 0.00300344 1.37393e+07 8.19806e+06 1.37822e+07 154 1.37794e+07 1.24223e+07 0.00277258 1.38703e+07 50.1643 0.0113464 0.996288 0 50.078 GTEX-1128S-0001-SM-58Q96 B1 Blood Whole Blood 0013756 783 BP-38828 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/09/2013 LCSET-4574 01/20/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-1128S-0001-SM-5DWTV B1 Blood Whole Blood 0013756 783 BP-38828 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/09/2013 GTEx_OM25_Dec_01 01/29/2014 Illumina OMNI SNP Array OMNI GTEX-1128S-0001-SM-6WBUH B1 Blood Whole Blood 0013756 783 BP-38828 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/09/2013 LCSET-6056 09/22/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-1128S-0005-SM-5P9HI B1 6.7 Blood Whole Blood 0013756 783 BP-38883 RNA isolation_PAXgene Blood RNA (Manual) 05/10/2013 LCSET-4916 03/27/2014 TruSeq.v1 RNASEQ 0.973177 1.38113e+06 0.946127 0.973843 0.709849 20836 1 76 0.00365126 143 0 1.13818e+08 0.0529809 273590 1.16875e+08 4.1737e+06 20867 5.66273e+07 0 0.236279 0.973843 0.691281 1.13818e+08 0.00430654 2.51302e+07 1.52046e+08 2.57111e+07 169 2.56061e+07 2.37105e+07 0.00397868 2.53583e+07 49.7569 0.00234088 0.974509 0 50.5713 GTEX-1128S-0008-SM-5Q5DP B1 8.9 Skin Cells - Cultured fibroblasts EFO_0002009 886 BP-39935 RNA isolation_Trizol Manual (Cell Pellet) 06/14/2013 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.991967 400527 0.975758 0.994541 0.866308 21271 1 76 0.00191287 218 0 9.32394e+07 0.023907 464741 9.37512e+07 1.30806e+07 21287 4.64158e+07 0 0.10945 0.994541 0.861579 9.32394e+07 0.0031809 2.07279e+07 1.58683e+07 2.08707e+07 238 2.09017e+07 2.42315e+07 0.00254525 2.09363e+07 50.0413 0.00495718 0.997116 0 50.1717 GTEX-1128S-0126-SM-5H12S 1 B1 2 pieces, no abnormalities noted 6.6 Thyroid Thyroid 0002046 820 1025 BP-43693 RNA Extraction from Paxgene-derived Lysate Plate Based 09/17/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.990824 208173 0.966904 0.992866 0.714929 23903 1 76 0.00220062 134 0 6.98093e+07 0.0328288 177021 7.03109e+07 7.79532e+06 23940 3.47361e+07 0 0.251975 0.992866 0.709829 6.98093e+07 0.00322143 1.5288e+07 6.37357e+06 1.53481e+07 147 1.53902e+07 1.03511e+07 0.00270998 1.53821e+07 49.9868 0.00251769 0.994907 0 50.098 GTEX-1128S-0326-SM-5GZZF 1 B1 6 pieces, congested serosa up to ~0.5mm, rep delineated 6 Blood Vessel Artery - Aorta 0001496 828 1017 BP-43693 RNA Extraction from Paxgene-derived Lysate Plate Based 09/17/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.986297 269426 0.972698 0.989211 0.776625 22774 1 76 0.00223839 154 0 7.79758e+07 0.0268661 196192 7.88263e+07 1.00472e+07 22800 3.87378e+07 0 0.196073 0.989211 0.768246 7.79758e+07 0.00363426 1.68025e+07 7.34059e+06 1.69204e+07 172 1.69747e+07 1.36119e+07 0.00293427 1.69718e+07 49.9958 0.00248892 0.992126 0 50.1748 GTEX-1128S-0726-SM-5N9D6 2 B1 2 pieces, diffuse moderate-marked acute/chronic pneumonitis/congestion 7.6 Lung Lung 0008952 840 1005 BP-43956 RNA Extraction from Paxgene-derived Lysate Plate Based 09/25/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.99003 166676 0.973528 0.991147 0.728068 23720 1 76 0.00317108 137 0 7.48802e+07 0.0261304 378516 7.55491e+07 3.63865e+06 23763 3.72624e+07 0 0.24546 0.991147 0.721622 7.48802e+07 0.00369926 1.65702e+07 7.66337e+06 1.66037e+07 152 1.65686e+07 1.14458e+07 0.00343487 1.66863e+07 50.177 0.0050102 0.992263 0 50.0506 GTEX-1128S-0826-SM-5GZZI 1 B1 2 pieces, up to 50% interstital fat, rep delineated; Islets well visualized, rep delineated. Some areas approach score 2/saponification/autolysis 6.2 Pancreas Pancreas 0001150 842 1003 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.989556 240872 0.978437 0.992468 0.82607 21236 1 76 0.00223995 131 0 8.21893e+07 0.0213993 403444 8.2813e+07 1.14632e+07 21256 4.08889e+07 0 0.152367 0.992468 0.819848 8.21893e+07 0.00334251 1.87495e+07 1.57533e+07 1.89162e+07 144 1.89867e+07 2.10761e+07 0.00278961 1.892e+07 49.912 0.00487175 0.995381 0 50.2213 GTEX-1128S-0926-SM-5GZZU 1 B1 2 pieces, ~5-10% fibrous/vascular tissue 6.5 Adipose Tissue Adipose - Visceral (Omentum) 0010414 844 1001 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.991152 224410 0.977791 0.993146 0.822412 22075 1 76 0.00219188 168 0 7.90924e+07 0.0219261 141927 7.96382e+07 9.49146e+06 22094 3.93799e+07 0 0.155379 0.993146 0.816775 7.90924e+07 0.00321314 1.7463e+07 8.87203e+06 1.7673e+07 192 1.76946e+07 1.50612e+07 0.00270149 1.75965e+07 49.861 0.00178215 0.99514 0 50.2987 GTEX-1128S-1426-SM-5N9EF 3 B1 6 pieces, near- total autolysis/mucosa completely sloughed 5.7 Esophagus Esophagus - Mucosa 0006920 859 986 BP-43507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/12/2013 LCSET-4905 03/23/2014 TruSeq.v1 EXCLUDE 0.988874 299710 0.979422 0.990388 0.81793 22617 1 76 0.00432693 266 0 9.42858e+07 0.0203758 4.18941e+06 9.52009e+07 4.32795e+06 22638 4.68652e+07 0 0.161492 0.990388 0.810068 9.42858e+07 0.00444808 2.07368e+07 1.49431e+07 2.08054e+07 299 2.07127e+07 1.18434e+07 0.00438741 2.09623e+07 50.2994 0.044006 0.991902 0 50.0825 GTEX-1128S-1626-SM-5H12O 3 B1 6 pieces, epithelial component of mucosa completely sloughed, some lamina propria elements remain 5.8 Colon Colon - Transverse 0001157 865 980 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.987769 179847 0.97414 0.990728 0.804111 23356 1 76 0.00245785 143 0 6.47606e+07 0.0251292 491695 6.53667e+07 8.18297e+06 23379 3.21764e+07 0 0.170028 0.990728 0.796655 6.47606e+07 0.00386952 1.43729e+07 6.79163e+06 1.43743e+07 159 1.43855e+07 1.0039e+07 0.00316158 1.45475e+07 50.28 0.00752211 0.993686 0 50.0024 GTEX-1128S-2126-SM-5H12U 0 B1 2 pieces 6.5 Adipose Tissue Adipose - Subcutaneous 0002190 882 963 BP-43507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/12/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.990693 156500 0.976552 0.992917 0.80184 21601 1 76 0.00217371 141 0 6.46054e+07 0.0231733 279576 6.50663e+07 7.94606e+06 21622 3.2156e+07 0 0.174711 0.992917 0.796161 6.46054e+07 0.00336434 1.41446e+07 6.00632e+06 1.41859e+07 156 1.41987e+07 1.05022e+07 0.0027677 1.42694e+07 50.1241 0.00429679 0.995141 0 50.073 GTEX-1128S-2326-SM-5GZZY 0 B1 6 pieces, squamous epithelium is 40-50 microns 7 Skin Skin - Sun Exposed (Lower leg) 0004264 886 959 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.989332 218936 0.96828 0.991241 0.762783 24311 1 76 0.00241892 283 0 9.08084e+07 0.0315409 639467 9.16108e+07 1.01585e+07 24351 4.52194e+07 0 0.205497 0.991241 0.756102 9.08084e+07 0.00338775 1.9899e+07 1.01034e+07 2.00466e+07 257 2.00057e+07 1.29663e+07 0.0029024 2.01034e+07 50.1218 0.00698026 0.99315 0 50.1847 GTEX-1128S-2426-SM-5H11B 0 B1 2 pieces ~10% adherent/interstitial fat, rep delineated 7.6 Muscle Muscle - Skeletal 0011907 889 956 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.9922 232445 0.984236 0.994007 0.871381 20012 1 76 0.00225736 275 0 9.7346e+07 0.0154572 1.4395e+06 9.7933e+07 1.21061e+07 20022 4.85008e+07 0 0.112856 0.994007 0.866158 9.7346e+07 0.00312438 2.15634e+07 1.64298e+07 2.136e+07 293 2.13002e+07 1.77236e+07 0.00269008 2.17844e+07 50.5619 0.0146988 0.995814 0 49.763 GTEX-1128S-2526-SM-5H11N 0 B1 3 pieces, generally clean specimens 6.1 Blood Vessel Artery - Tibial 0007610 889 956 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.988223 155651 0.975075 0.991076 0.83413 21007 1 76 0.0021005 145 0 6.23444e+07 0.0246285 355285 6.29057e+07 8.04726e+06 21019 3.0997e+07 0 0.140945 0.991076 0.826686 6.23444e+07 0.00364071 1.34221e+07 6.27528e+06 1.35521e+07 153 1.35357e+07 1.14083e+07 0.00286839 1.36121e+07 50.1407 0.0056479 0.993929 0 50.241 GTEX-1128S-2626-SM-5H11Z 1 B1 2 pieces, 90% adenohypophysis/ 10% neurohypophysis 6.7 Pituitary Pituitary 0000007 1030 815 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.990045 279511 0.965438 0.992478 0.738286 25305 1 76 0.0022669 141 0 7.3971e+07 0.0342672 411522 7.45316e+07 9.88063e+06 25340 3.67948e+07 0 0.227152 0.992478 0.732733 7.3971e+07 0.00340699 1.61832e+07 7.63612e+06 1.63015e+07 163 1.63544e+07 1.10415e+07 0.00283555 1.63044e+07 49.9234 0.00552144 0.994912 0 50.182 GTEX-1128S-2726-SM-5H12C 1 B1 2 pieces, no abnormalities 6.3 Brain Brain - Cortex 0001870 1034 811 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.990483 400475 0.962688 0.993186 0.832066 23634 1 76 0.00244631 268 0 8.81721e+07 0.0370022 4.07208e+06 8.8777e+07 1.13043e+07 23650 4.38769e+07 0 0.130622 0.993186 0.826396 8.81721e+07 0.00360614 1.92888e+07 1.99971e+07 1.94557e+07 308 1.93668e+07 9.66262e+06 0.00302465 1.95975e+07 50.2961 0.0458686 0.995889 0 50.2155 GTEX-1128S-2826-SM-5N9DI 1 B1 2 pieces, Purkinje cells, no evidence of hypoxic damage 6.3 Brain Brain - Cerebellum 0002037 1036 809 BP-43956 RNA Extraction from Paxgene-derived Lysate Plate Based 09/25/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.991069 435871 0.93529 0.992053 0.711747 22983 1 76 0.0031993 126 0 6.58241e+07 0.0644661 1.61115e+06 6.63514e+07 3.00071e+06 23004 3.27623e+07 0 0.223543 0.992053 0.706091 6.58241e+07 0.00366805 1.39945e+07 2.06605e+07 1.4165e+07 148 1.41006e+07 6.42584e+06 0.00343344 1.41222e+07 50.0382 0.0242821 0.993037 0 50.3028 GTEX-113IC-0001-SM-58Q97 B1 Blood Whole Blood 0013756 -351 BP-38890 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/10/2013 LCSET-4574 01/20/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-113IC-0001-SM-5DWSI B1 Blood Whole Blood 0013756 -351 BP-38890 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/10/2013 GTEx_OM25_Dec_01 01/29/2014 Illumina OMNI SNP Array OMNI GTEX-113IC-0001-SM-DLIPU B1 Blood Whole Blood 0013756 -351 BP-38890 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/10/2013 LCSET-10442 01/24/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-113IC-0006-SM-5NQ9C B1 8.6 Blood Whole Blood 0013756 -351 BP-38883 RNA isolation_PAXgene Blood RNA (Manual) 05/10/2013 LCSET-4906 03/22/2014 TruSeq.v1 RNASEQ 0.990953 494848 0.954345 0.992398 0.75565 20349 1 76 0.00238642 114 0 6.55132e+07 0.0451442 84043 6.60151e+07 4.87755e+06 20363 3.26131e+07 0 0.198695 0.992398 0.749905 6.55132e+07 0.00341612 1.43244e+07 3.86714e+07 1.44999e+07 125 1.44964e+07 1.27611e+07 0.00290052 1.44299e+07 49.8851 0.00127309 0.993843 0 50.3045 GTEX-113IC-0008-SM-5QGRF B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 94 BP-39935 RNA isolation_Trizol Manual (Cell Pellet) 06/14/2013 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.994611 457452 0.97444 0.995567 0.860358 19742 1 76 0.00178661 147 0 6.80517e+07 0.0252717 320767 6.83547e+07 4.47708e+06 19755 3.39279e+07 0 0.114082 0.995567 0.856544 6.80517e+07 0.00251265 1.51523e+07 1.16762e+07 1.52713e+07 146 1.52374e+07 1.73689e+07 0.00214928 1.52637e+07 50.0431 0.00469269 0.996524 0 50.1956 GTEX-113IC-0126-SM-5HL6T 0 B1 6 pieces, squamous epithelium is ~60 microns thick 7.2 Skin Skin - Sun Exposed (Lower leg) 0004264 94 1080 BP-43529 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.990044 236888 0.968855 0.992448 0.773015 23717 1 76 0.00254662 129 0 5.76246e+07 0.030891 359227 5.80631e+07 6.47396e+06 23740 2.8668e+07 0 0.195841 0.992448 0.767177 5.76246e+07 0.00362957 1.25375e+07 5.57599e+06 1.26443e+07 131 1.26349e+07 9.02601e+06 0.00308678 1.26785e+07 50.0861 0.00618684 0.994852 0 50.2121 GTEX-113IC-0226-SM-5HL5C 0 B1 2 pieces, 40-50% adipose tissue (delineated), rest is fibroconnective tissue 6.7 Adipose Tissue Adipose - Subcutaneous 0002190 96 1078 BP-43507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/12/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.991745 185118 0.974144 0.993739 0.823367 23027 1 76 0.00238364 146 0 6.59746e+07 0.0255442 371015 6.63903e+07 7.61601e+06 23047 3.2835e+07 0 0.150776 0.993739 0.818212 6.59746e+07 0.00339304 1.44631e+07 5.78993e+06 1.45592e+07 156 1.45382e+07 1.1828e+07 0.00288733 1.46139e+07 50.1298 0.0055884 0.995732 0 50.1656 GTEX-113IC-0426-SM-5HL5O 0 B1 2 pieces, clean specimens, prominent Monckeberg sclerosis, rep. foci delineated 8.3 Blood Vessel Artery - Tibial 0007610 101 1073 BP-43507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/12/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.98972 310543 0.974672 0.992483 0.862868 21977 1 76 0.00222265 145 0 6.63308e+07 0.0249157 211364 6.68332e+07 7.92106e+06 21991 3.29737e+07 0 0.111804 0.992483 0.856382 6.63308e+07 0.0034414 1.41965e+07 6.14007e+06 1.43242e+07 162 1.42962e+07 1.30822e+07 0.00283033 1.44076e+07 50.194 0.00316256 0.995247 0 50.2238 GTEX-113IC-0526-SM-5HL76 0 B1 2 pieces, trace adherent nubbins of fat up to ~1mm, delineated. Good specimens 7.1 Nerve Nerve - Tibial 0001323 105 1069 BP-43529 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.989608 162635 0.969996 0.991813 0.804698 22899 1 76 0.00241302 142 0 5.71371e+07 0.0296692 282054 5.76087e+07 6.37713e+06 22922 2.84223e+07 0 0.165297 0.991813 0.79811 5.71371e+07 0.00348323 1.24922e+07 5.1008e+06 1.25474e+07 135 1.25223e+07 9.93814e+06 0.00294694 1.26398e+07 50.2334 0.00489603 0.994019 0 50.1102 GTEX-113JC-0001-SM-58Q7M B1 Blood Whole Blood 0013756 587 BP-38920 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/13/2013 LCSET-4574 01/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-113JC-0001-SM-5DWSH B1 Blood Whole Blood 0013756 587 BP-38920 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/13/2013 GTEx_OM25_Dec_01 01/29/2014 Illumina OMNI SNP Array OMNI GTEX-113JC-0001-SM-6WBTD B1 Blood Whole Blood 0013756 587 BP-38920 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/13/2013 LCSET-6056 09/22/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-113JC-0006-SM-5O997 B1 7.6 Blood Whole Blood 0013756 587 BP-38943 RNA isolation_PAXgene Blood RNA (Manual) 05/14/2013 LCSET-4909 03/20/2014 TruSeq.v1 RNASEQ 0.958802 385976 0.981747 0.962992 0.784795 18233 1 76 0.00239205 100 0 8.49315e+07 0.0170281 162448 8.81955e+07 1.32966e+07 18239 4.21538e+07 0 0.196953 0.962992 0.755751 8.49315e+07 0.00437273 1.98001e+07 1.30756e+08 2.00872e+07 135 2.01027e+07 2.19739e+07 0.00337808 2.01443e+07 50.0516 0.00184191 0.967181 0 50.3599 GTEX-113JC-0008-SM-5QGR6 B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 681 BP-40621 RNA isolation_Trizol Manual (Cell Pellet) 07/10/2013 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.994723 263957 0.98125 0.995709 0.879991 19065 1 76 0.00155823 149 0 6.8855e+07 0.0184075 235629 6.91517e+07 4.34033e+06 19073 3.43271e+07 0 0.101259 0.995709 0.876215 6.8855e+07 0.00228368 1.54765e+07 7.4448e+06 1.55365e+07 156 1.55072e+07 1.74847e+07 0.0019206 1.55779e+07 50.1136 0.00340742 0.996695 0 50.0969 GTEX-113JC-0126-SM-5EGJW 1 B1 2 pieces 5.8 Thyroid Thyroid 0002046 627 994 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.988508 302257 0.969122 0.991161 0.682377 23696 1 76 0.00203551 140 0 7.72786e+07 0.0306201 214067 7.79678e+07 6.70913e+06 23745 3.84279e+07 0 0.286745 0.991161 0.676346 7.72786e+07 0.00309199 1.69691e+07 7.35968e+06 1.71513e+07 159 1.71929e+07 1.03424e+07 0.00256233 1.71223e+07 49.8971 0.00274558 0.993815 0 50.2671 GTEX-113JC-0726-SM-5GZZR 1 B1 2 pieces 7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 639 982 BP-43693 RNA Extraction from Paxgene-derived Lysate Plate Based 09/17/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.983439 215598 0.978059 0.98645 0.762104 22903 1 76 0.00215465 160 0 7.33797e+07 0.0216415 902286 7.43877e+07 9.36076e+06 22928 3.6459e+07 0 0.215955 0.98645 0.751777 7.33797e+07 0.00353816 1.62995e+07 9.14069e+06 1.63599e+07 180 1.63932e+07 1.06012e+07 0.00284429 1.64848e+07 50.1393 0.0121295 0.98946 0 50.0925 GTEX-113JC-0926-SM-5H114 1 B1 6 pieces, well trimmed muscle 5.8 Esophagus Esophagus - Muscularis 0004648 645 976 BP-43693 RNA Extraction from Paxgene-derived Lysate Plate Based 09/17/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.84395 177128 0.968973 0.846095 0.780423 21822 1 76 0.00218065 134 0 6.15511e+07 0.0308397 887823 7.27473e+07 8.9856e+06 21848 3.06008e+07 0 0.188549 0.846095 0.660312 6.15511e+07 0.00339263 1.33915e+07 6.06088e+06 1.34409e+07 159 1.34302e+07 7.70478e+06 0.0027851 1.35518e+07 50.2253 0.0122042 0.848241 0 50.0921 GTEX-113JC-1026-SM-5H117 1 B1 6 pieces, well trimmed muscle 6.3 Esophagus Esophagus - Gastroesophageal Junction 0004550 646 975 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.989172 212784 0.971295 0.991725 0.803621 21801 1 76 0.00207916 160 0 7.30466e+07 0.0285255 1.08129e+06 7.36561e+07 9.69251e+06 21818 3.6337e+07 0 0.167674 0.991725 0.796972 7.30466e+07 0.00336891 1.58575e+07 6.83144e+06 1.59102e+07 199 1.5897e+07 9.68939e+06 0.00272238 1.6051e+07 50.241 0.0146802 0.994278 0 50.083 GTEX-113JC-1926-SM-5N9GE 1 B1 6 pieces 5.7 Vagina Vagina 0000996 669 952 BP-43693 RNA Extraction from Paxgene-derived Lysate Plate Based 09/17/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.98493 345857 0.968802 0.98592 0.732037 24980 1 76 0.00420057 212 0 9.81422e+07 0.0309716 624217 9.95437e+07 5.392e+06 25024 4.8673e+07 0 0.236765 0.98592 0.72173 9.81422e+07 0.00441809 2.17497e+07 1.06124e+07 2.18122e+07 221 2.1764e+07 1.37334e+07 0.00430922 2.19028e+07 50.1589 0.00627078 0.98691 0 50.0718 GTEX-113JC-2226-SM-5EGJG 1 B1 2 pieces; atrophic endometrium 6.3 Uterus Uterus 0000995 676 945 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.988839 230745 0.968836 0.991312 0.714306 23419 1 76 0.00203604 147 0 7.23491e+07 0.0308752 146486 7.29832e+07 6.03042e+06 23459 3.59572e+07 0 0.25453 0.991312 0.7081 7.23491e+07 0.00313145 1.58083e+07 6.59958e+06 1.59675e+07 155 1.59672e+07 1.09864e+07 0.00258238 1.5983e+07 50.0248 0.00200712 0.993785 0 50.2505 GTEX-113JC-2326-SM-5EQ4E 1 B1 6 pieces; up to 30% fat within the dermis 7.5 Skin Skin - Sun Exposed (Lower leg) 0004264 681 940 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.991228 255196 0.97345 0.993675 0.780447 23526 1 76 0.00203143 200 0 7.37073e+07 0.0262887 301962 7.41765e+07 9.00746e+06 23553 3.66765e+07 0 0.193003 0.993675 0.775511 7.37073e+07 0.00314681 1.60671e+07 8.44414e+06 1.62181e+07 169 1.62339e+07 1.28485e+07 0.00258775 1.62226e+07 49.9826 0.00407086 0.996122 0 50.2339 GTEX-113JC-2726-SM-5EGIS 0 B1 2 pieces 7.7 Muscle Muscle - Skeletal 0011907 686 935 BP-43529 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.983976 223292 0.983145 0.989632 0.870333 19426 1 76 0.00209209 122 0 6.17054e+07 0.0166355 572061 6.23518e+07 1.00418e+07 19433 3.06145e+07 0 0.112812 0.989632 0.861309 6.17054e+07 0.00536547 1.36283e+07 6.89940e+06 1.35129e+07 139 1.36218e+07 1.28313e+07 0.00371943 1.38379e+07 50.3934 0.00917472 0.995288 0 49.7874 GTEX-113JC-2826-SM-5EGIT 2 B1 2 pieces; anterior and posterior represented; some boney fragments with marrow 6.1 Pituitary Pituitary 0000007 818 803 BP-43529 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.986095 248252 0.963208 0.990175 0.737607 23772 1 76 0.00239295 114 0 6.04778e+07 0.0365457 266693 6.10779e+07 9.43048e+06 23799 3.00399e+07 0 0.225601 0.990175 0.73036 6.04778e+07 0.0052926 1.29208e+07 9.24137e+06 1.30163e+07 127 1.30902e+07 9.35082e+06 0.0038368 1.30772e+07 49.9752 0.00436644 0.994254 0 50.1841 GTEX-117XS-0001-SM-58Q7J B1 Blood Whole Blood 0013756 802 BP-38920 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/13/2013 LCSET-4574 01/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-117XS-0001-SM-5DWSE B1 Blood Whole Blood 0013756 802 BP-38920 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/13/2013 GTEx_OM25_Dec_01 01/29/2014 Illumina OMNI SNP Array OMNI GTEX-117XS-0001-SM-6WBTA B1 Blood Whole Blood 0013756 802 BP-38920 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/13/2013 LCSET-6056 09/21/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-117XS-0005-SM-5PNU6 B1 6.4 Blood Whole Blood 0013756 802 BP-38943 RNA isolation_PAXgene Blood RNA (Manual) 05/14/2013 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.960674 371056 0.978298 0.962396 0.807746 16519 1 76 0.00234312 95 0 6.4754e+07 0.0200178 230282 6.72841e+07 7.02284e+06 16521 3.21941e+07 0 0.170553 0.962396 0.777371 6.4754e+07 0.00406583 1.52079e+07 1.10752e+08 1.53347e+07 113 1.53068e+07 1.68621e+07 0.00320293 1.5368e+07 50.0999 0.00342253 0.964118 0 50.2075 GTEX-117XS-0008-SM-5Q5DQ B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 917 BP-39935 RNA isolation_Trizol Manual (Cell Pellet) 06/14/2013 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.991389 449957 0.976267 0.994092 0.856398 21212 1 76 0.00187326 217 0 9.56742e+07 0.0233618 348920 9.62429e+07 1.54032e+07 21230 4.7623e+07 0 0.119868 0.994092 0.851338 9.56742e+07 0.0031246 2.14262e+07 1.62208e+07 2.15228e+07 246 2.15762e+07 2.51945e+07 0.00249723 2.1632e+07 50.0645 0.00362541 0.996794 0 50.1124 GTEX-117XS-0011-R10a-SM-AHZ7G B1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 834 ChIP-Seq GTEX-117XS-0426-SM-5GZZN 1 B1 6 pieces, mural atherosclerotic changes 6.6 Blood Vessel Artery - Aorta 0001496 857 597 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.989492 247390 0.974589 0.992163 0.803101 21537 1 76 0.00219702 167 0 7.85478e+07 0.0249858 222363 7.91683e+07 9.98143e+06 21553 3.90414e+07 0 0.171488 0.992163 0.796807 7.85478e+07 0.00349298 1.68565e+07 7.17083e+06 1.70299e+07 181 1.70443e+07 1.41577e+07 0.00284326 1.70479e+07 50.0052 0.00280874 0.994833 0 50.2559 GTEX-117XS-0526-SM-5987Q 2 B1 2 pieces, nodular hyperplasia 7 Thyroid Thyroid 0002046 859 595 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.985041 215394 0.969179 0.989467 0.737936 23644 1 76 0.0028242 116 0 5.94656e+07 0.0305055 219447 6.00986e+07 1.28068e+07 23676 2.95212e+07 0 0.231243 0.989467 0.730163 5.94656e+07 0.00616407 1.30117e+07 6.6456e+06 1.30862e+07 120 1.31763e+07 9.25921e+06 0.00448667 1.317e+07 49.9881 0.00365145 0.993892 0 50.1427 GTEX-117XS-0726-SM-5H131 1 B1 2 pieces, myocardial infarction, diffuse interstitial fibrosis 6.9 Heart Heart - Atrial Appendage 0006631 862 592 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.990133 197718 0.976823 0.992974 0.821585 21590 1 76 0.00235159 155 0 6.92814e+07 0.0229838 2.57374e+06 6.97717e+07 8.9561e+06 21608 3.44696e+07 0 0.155239 0.992974 0.815812 6.92814e+07 0.00369097 1.52494e+07 1.11875e+07 1.50361e+07 195 1.50512e+07 8.14924e+06 0.00301937 1.5409e+07 50.5872 0.036888 0.995815 0 49.6478 GTEX-117XS-1926-SM-5GICO 1 B1 2 pieces, gynecomastoid change 6 Breast Breast - Mammary Tissue 0008367 894 560 BP-44261 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4796,LCSET-5161 03/17/2014 TruSeq.v1 RNASEQ 0.977445 336013 0.974068 0.983765 0.759742 25123 1 76 0.00463264 278 0 1.088e+08 0.0256133 753484 1.10595e+08 1.04655e+07 25175 5.38553e+07 0 0.214325 0.983765 0.747408 1.088e+08 0.00604888 2.37927e+07 1.29269e+07 2.40705e+07 274 2.42468e+07 1.47972e+07 0.00533622 2.42636e+07 50.0173 0.006813 0.990086 0 50.2901 GTEX-117XS-2026-SM-5GID1 1 B1 2 pieces, spermatogenesis present 6.8 Testis Testis 0000473 896 558 BP-44261 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4796 02/27/2014 TruSeq.v1 RNASEQ 0.988355 237864 0.931534 0.990823 0.732771 32475 1 76 0.00281087 143 0 7.03354e+07 0.0681131 527882 7.09868e+07 9.12350e+06 32525 3.4996e+07 0 0.198763 0.990823 0.726047 7.03354e+07 0.00335334 1.46417e+07 9.5707e+06 1.46865e+07 139 1.47607e+07 1.18683e+07 0.00308143 1.47252e+07 49.9398 0.00743634 0.993291 0 50.0764 GTEX-117XS-2226-SM-5GIE1 2 B1 6 pieces, muscularis present (target); few pieces include 10 to 40% fat up to 1.175 mm; two pieces with small fragments of autolyzed mucosa 6.2 Colon Colon - Sigmoid 0001159 907 547 BP-44261 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4796 02/27/2014 TruSeq.v1 RNASEQ 0.987049 261681 0.968299 0.990643 0.811839 22234 1 76 0.00267008 131 0 6.28684e+07 0.0314644 690090 6.34622e+07 8.32302e+06 22247 3.12306e+07 0 0.15646 0.990643 0.804243 6.28684e+07 0.00378189 1.34132e+07 7.16708e+06 1.34595e+07 148 1.34738e+07 1.01192e+07 0.00322397 1.36128e+07 50.2565 0.010874 0.994237 0 50.0861 GTEX-117XS-2526-SM-5H11G 2 B1 2 pieces, includes up to 10% attached and internal adipose tissue 8.3 Muscle Muscle - Skeletal 0011907 914 540 BP-43693 RNA Extraction from Paxgene-derived Lysate Plate Based 09/17/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.993113 211694 0.986479 0.99503 0.888865 19167 1 76 0.00192204 198 0 8.01305e+07 0.0133125 1.0168e+06 8.05307e+07 1.01815e+07 19175 3.99259e+07 0 0.0976137 0.99503 0.884448 8.01305e+07 0.00277694 1.74394e+07 9.80234e+06 1.74653e+07 227 1.7399e+07 1.72607e+07 0.00234867 1.76593e+07 50.3713 0.0126262 0.996948 0 50.0372 GTEX-117XS-2526-SM-CYKR4 2 B1 2 pieces, includes up to 10% attached and internal adipose tissue 8.3 Muscle Muscle - Skeletal 0011907 914 540 BP-43693 RNA Extraction from Paxgene-derived Lysate Plate Based 09/17/2013 RIP-Seq GTEX-117XS-2726-SM-5N9BL 1 B1 6 pieces, some pieces include up to 10% attached and internal adipose tissue 6.9 Skin Skin - Sun Exposed (Lower leg) 0004264 916 538 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.991879 196421 0.971106 0.992687 0.792756 23286 1 76 0.00290525 248 0 8.68214e+07 0.0287073 687002 8.7461e+07 4.18073e+06 23313 4.3237e+07 0 0.17835 0.992687 0.786958 8.68214e+07 0.00352805 1.89958e+07 9.94013e+06 1.90785e+07 220 1.89569e+07 1.37056e+07 0.0032164 1.919e+07 50.3056 0.00785495 0.993495 0 50.1085 GTEX-117XS-2926-SM-5N9BX 1 B1 5 pieces, adenohypophysis (larger pieces) and neurohypophysis (smallest piece, marked) 7.5 Pituitary Pituitary 0000007 1016 438 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.992034 277273 0.96823 0.993337 0.799339 25704 1 76 0.00276585 204 0 9.41348e+07 0.0314696 231111 9.47663e+07 4.83845e+06 25744 4.68791e+07 0 0.168891 0.993337 0.794013 9.41348e+07 0.00334942 1.73352e+07 1.14758e+07 1.74236e+07 247 1.74284e+07 1.87131e+07 0.00305725 1.74378e+07 50.0135 0.00243875 0.99464 0 50.1271 GTEX-117XS-3026-SM-5N9CA 1 B1 3 pieces 6.4 Brain Brain - Cortex 0001870 1017 437 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.992014 346781 0.967309 0.993303 0.830201 24501 1 76 0.00298026 270 0 1.04567e+08 0.0323446 3.67525e+06 1.05272e+08 5.49317e+06 24525 5.2091e+07 0 0.137108 0.993303 0.824641 1.04567e+08 0.00353795 2.27815e+07 2.20157e+07 2.30573e+07 320 2.2951e+07 1.26402e+07 0.00325874 2.30079e+07 50.0619 0.0349119 0.994591 0 50.3008 GTEX-117XS-3026-SM-CYKOR 1 B1 3 pieces 6.4 Brain Brain - Cortex 0001870 1017 437 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 RIP-Seq GTEX-117XS-3126-SM-5GIDP 1 B1 2 pieces, Purkinje cells present 7.2 Brain Brain - Cerebellum 0002037 1018 436 BP-44261 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4796 02/27/2014 TruSeq.v1 RNASEQ 0.988669 301081 0.951371 0.990955 0.734977 23003 1 76 0.00298862 112 0 6.1555e+07 0.0482285 852630 6.21168e+07 7.40227e+06 23024 3.06101e+07 0 0.216395 0.990955 0.728329 6.1555e+07 0.00369029 1.33679e+07 9.82856e+06 1.34417e+07 138 1.34903e+07 7.72495e+06 0.00333864 1.34505e+07 49.9261 0.0137262 0.993241 0 50.1377 GTEX-117YW-0003-SM-58Q99 B1 Blood Whole Blood 0013756 771 BP-38948 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/14/2013 LCSET-4574 01/20/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-117YW-0003-SM-5DWRD B1 Blood Whole Blood 0013756 771 BP-38948 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/14/2013 GTEx_OM25_Dec_01 01/29/2014 Illumina OMNI SNP Array OMNI GTEX-117YW-0003-SM-6WBSY B1 Blood Whole Blood 0013756 771 BP-38948 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/14/2013 LCSET-6056 09/21/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-117YW-0005-SM-5NQ8Z B1 8.5 Blood Whole Blood 0013756 771 BP-38943 RNA isolation_PAXgene Blood RNA (Manual) 05/14/2013 LCSET-4906 03/22/2014 TruSeq.v1 RNASEQ 0.976598 363381 0.978813 0.978503 0.780731 18582 1 76 0.00247853 109 0 7.83408e+07 0.0199449 202166 8.00619e+07 7.28288e+06 18593 3.89748e+07 0 0.198082 0.978503 0.763948 7.83408e+07 0.0037221 1.79832e+07 1.05671e+08 1.8467e+07 133 1.84596e+07 1.87715e+07 0.0030991 1.81456e+07 49.5711 0.00252512 0.980408 0 50.6636 GTEX-117YW-0008-SM-5QGRD B1 9.9 Skin Cells - Cultured fibroblasts EFO_0002009 980 BP-39935 RNA isolation_Trizol Manual (Cell Pellet) 06/14/2013 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.994335 432097 0.974778 0.995489 0.862078 19362 1 76 0.00157915 146 0 6.71738e+07 0.0248581 272333 6.74782e+07 4.70688e+06 19371 3.34852e+07 0 0.112699 0.995489 0.85819 6.71738e+07 0.00231957 1.50552e+07 1.1275e+07 1.51127e+07 144 1.51128e+07 1.75693e+07 0.00194893 1.51417e+07 50.0476 0.00403586 0.996643 0 50.0954 GTEX-117YW-0126-SM-5EGGN 2 B1 2 pieces, some fibrosis and nodularity, few collections of lymphocytes 6.8 Thyroid Thyroid 0002046 813 712 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.982585 198712 0.963963 0.987043 0.638625 24353 1 76 0.00261941 103 0 6.19445e+07 0.0357358 169925 6.27577e+07 9.15124e+06 24397 3.07437e+07 0 0.325338 0.987043 0.63035 6.19445e+07 0.00568586 1.35579e+07 6.70738e+06 1.36347e+07 115 1.37273e+07 7.67021e+06 0.00414571 1.37274e+07 50.0001 0.00270764 0.991501 0 50.1412 GTEX-117YW-0226-SM-5N9CM 1 B1 6 pieces, mild atherosclerosis, some attached adventitia 6.5 Blood Vessel Artery - Aorta 0001496 815 710 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.988966 208302 0.969172 0.989807 0.77849 22587 1 76 0.00297243 164 0 8.00206e+07 0.0304643 158789 8.08446e+07 3.76641e+06 22609 3.98051e+07 0 0.190683 0.989807 0.770554 8.00206e+07 0.00360991 1.71081e+07 8.77538e+06 1.71924e+07 179 1.71182e+07 1.35473e+07 0.0032909 1.72539e+07 50.1974 0.00196413 0.990647 0 50.1228 GTEX-117YW-0326-SM-5N9CY 0 B1 2 pieces, small component of fat (<10% both pieces), increased interstitial and patchy fibrosis with evidence of old myocardial infarction, myocyte hypertrophy 5.7 Heart Heart - Left Ventricle 0006566 816 709 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.99057 150503 0.984444 0.991893 0.832867 20097 1 76 0.00273222 264 0 7.32563e+07 0.0154486 4.59143e+06 7.3855e+07 3.36556e+06 20106 3.64785e+07 0 0.151577 0.991893 0.826115 7.32563e+07 0.0033926 1.62772e+07 2.69493e+07 1.63719e+07 276 1.62745e+07 5.20362e+06 0.00306197 1.64648e+07 50.2906 0.0621681 0.993217 0 50.1451 GTEX-117YW-0426-SM-5GZZZ 1 B1 2 pieces, one is ~25% fat, second includes 2 zones of fibrosis/old infarct 5.8 Heart Heart - Atrial Appendage 0006631 817 708 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.986906 141936 0.98729 0.990119 0.837394 19840 1 76 0.00207371 366 0 8.82702e+07 0.0126497 7.45302e+06 8.91511e+07 1.12206e+07 19846 4.39202e+07 0 0.149896 0.990119 0.829121 8.82702e+07 0.00347058 1.98206e+07 4.47756e+07 1.8947e+07 387 1.89073e+07 3.95834e+06 0.00276988 2.01319e+07 51.5684 0.0835999 0.993333 0 48.8733 GTEX-117YW-0526-SM-5H11C 1 B1 2 pieces, severe congestion and edema, numerous hemosiderin-laden macrophages 6.2 Lung Lung 0008952 825 700 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.986327 293181 0.970213 0.989652 0.711333 24177 1 76 0.00256866 146 0 7.5802e+07 0.0292101 374126 7.65946e+07 8.69729e+06 24214 3.76241e+07 0 0.25888 0.989652 0.703972 7.5802e+07 0.00402577 1.66822e+07 7.62691e+06 1.67975e+07 167 1.68457e+07 1.00469e+07 0.00329477 1.68838e+07 50.0564 0.0048845 0.992977 0 50.1722 GTEX-117YW-0826-SM-5H11O 0 B1 2 pieces, all fat 6.4 Adipose Tissue Adipose - Visceral (Omentum) 0010414 838 687 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.987482 263950 0.973755 0.990239 0.754071 23699 1 76 0.00228054 144 0 6.70282e+07 0.0259164 421414 6.76889e+07 8.32683e+06 23726 3.33156e+07 0 0.219684 0.990239 0.746711 6.70282e+07 0.00372774 1.47916e+07 7.82429e+06 1.48579e+07 158 1.48899e+07 9.85232e+06 0.00300213 1.49413e+07 50.0862 0.00622574 0.992997 0 50.1118 GTEX-117YW-1426-SM-5EGGO 1 B1 2 pieces, epithelium largely sloughed, glandular hyperplasia, chronic prostatitis, some basal cell hyperplasia 5.9 Prostate Prostate 0002367 884 641 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.981875 175016 0.970091 0.987373 0.737855 23886 1 76 0.00250385 118 0 5.4352e+07 0.0296745 1.18888e+06 5.50471e+07 7.98707e+06 23919 2.69367e+07 0 0.232236 0.987373 0.728538 5.4352e+07 0.00621777 1.21246e+07 6.19394e+06 1.20901e+07 133 1.21574e+07 6.31569e+06 0.00435047 1.23391e+07 50.3708 0.0215976 0.992871 0 49.9288 GTEX-117YW-1526-SM-5EGGP 1 B1 2 pieces, active spermatogenesis, arteriosclerosis 6.6 Testis Testis 0000473 886 639 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.984637 184377 0.927292 0.988719 0.725215 31665 1 76 0.00237683 121 0 5.98333e+07 0.0723521 509405 6.0516e+07 8.91679e+06 31706 2.97244e+07 0 0.202077 0.988719 0.717034 5.98333e+07 0.00538229 1.22533e+07 8.56875e+06 1.22624e+07 118 1.23364e+07 9.98054e+06 0.00387336 1.2395e+07 50.1185 0.00841769 0.9928 0 50.0186 GTEX-117YW-1826-SM-5PNY5 2 B1 6 pieces, mucosa (autolysis 1-2) and muscularis 6.2 Colon Colon - Transverse 0001157 895 630 BP-44261 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.989371 197406 0.978724 0.990077 0.755756 23728 1 76 0.00377523 285 0 9.9077e+07 0.0185449 2.06041e+06 1.0007e+08 2.79753e+06 23767 4.92281e+07 0 0.222967 0.990077 0.748257 9.9077e+07 0.0041378 2.2498e+07 1.40082e+07 2.2619e+07 271 2.25695e+07 1.47053e+07 0.00395638 2.26121e+07 50.0472 0.0205897 0.990783 0 50.1341 GTEX-117YW-1926-SM-5H121 2 B1 6 pieces, epithelium sloughing, muscularis focally present 6.6 Esophagus Esophagus - Mucosa 0006920 902 623 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.987357 237994 0.976764 0.990014 0.819778 21436 1 76 0.00221683 156 0 7.47268e+07 0.0230115 867659 7.54806e+07 9.19838e+06 21449 3.71594e+07 0 0.156985 0.990014 0.811591 7.47268e+07 0.0037615 1.68804e+07 1.04212e+07 1.69419e+07 202 1.69576e+07 1.06439e+07 0.00298709 1.70641e+07 50.1566 0.0114951 0.99267 0 50.0909 GTEX-117YW-2026-SM-5N9BH 2 B1 6 pieces, trimmed, but with abundant detached squamous (and few glandular) cells 5.9 Esophagus Esophagus - Muscularis 0004648 904 621 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.991284 161570 0.974477 0.992226 0.825944 22479 1 76 0.00279623 267 0 8.48524e+07 0.0253461 3.07341e+06 8.55172e+07 4.13927e+06 22497 4.22475e+07 0 0.148533 0.992226 0.819523 8.48524e+07 0.00343472 1.8591e+07 1.07216e+07 1.87159e+07 314 1.85569e+07 9.34778e+06 0.00311517 1.88309e+07 50.3665 0.0359391 0.993167 0 50.1674 GTEX-117YW-2226-SM-5N9DB 2 B1 6 pieces, mucosa and muscularis 7.3 Stomach Stomach 0000945 910 615 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.980499 173923 0.98366 0.981914 0.867743 21736 1 76 0.00268497 329 0 8.87021e+07 0.0158023 420615 9.03359e+07 4.75854e+06 21753 4.4161e+07 0 0.115918 0.981914 0.852049 8.87021e+07 0.00325672 2.04619e+07 1.10052e+08 2.08129e+07 250 2.08369e+07 2.65918e+07 0.00297044 2.05622e+07 49.6683 0.00465612 0.983329 0 50.4252 GTEX-117YW-2426-SM-5Q5AE 1 B1 2 pieces (fragmented), one includes ~20% fat (mostly internal) 6.1 Muscle Muscle - Skeletal 0011907 978 547 BP-44261 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.990337 192995 0.985243 0.993022 0.884722 19070 1 76 0.00153747 199 0 8.52505e+07 0.0145279 1.03858e+06 8.58496e+07 5.94943e+06 19078 4.24231e+07 0 0.100521 0.993022 0.878548 8.52505e+07 0.00258722 1.83198e+07 9.68145e+06 1.83271e+07 229 1.82925e+07 1.83279e+07 0.00206093 1.85567e+07 50.3584 0.0120977 0.995706 0 50.01 GTEX-117YW-2626-SM-5GZZH 1 B1 6 pieces, predominantly well trimmed, one piece includes attached fat ~10%, squamous epithelium is ~30 microns thick 6.8 Skin Skin - Sun Exposed (Lower leg) 0004264 982 543 BP-43507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/12/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.982481 255623 0.975499 0.985379 0.808283 23785 1 76 0.00211647 166 0 7.20431e+07 0.0242787 337575 7.31121e+07 8.80992e+06 23807 3.58196e+07 0 0.167216 0.985379 0.796465 7.20431e+07 0.00357027 1.58526e+07 7.91328e+06 1.59661e+07 173 1.59907e+07 1.2665e+07 0.00284123 1.60367e+07 50.0718 0.00461723 0.988276 0 50.1782 GTEX-117YW-2726-SM-5GZZT 1 B1 2 pieces, medial calcific sclerosis 7.7 Blood Vessel Artery - Tibial 0007610 984 541 BP-43507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/12/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.989656 216808 0.977663 0.992479 0.843979 22809 1 76 0.00200431 174 0 7.16776e+07 0.0220166 341268 7.22207e+07 8.8667e+06 22827 3.56388e+07 0 0.133684 0.992479 0.837632 7.16776e+07 0.0035739 1.54313e+07 6.62954e+06 1.55556e+07 172 1.55741e+07 1.42922e+07 0.00278687 1.56106e+07 50.0586 0.00472535 0.995302 0 50.2005 GTEX-117YW-2826-SM-5H116 1 B1 2 pieces, includes adenohypophysis, neurohypopohysis, and pars intermedia 6 Pituitary Pituitary 0000007 1042 483 BP-43507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/12/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.989008 402389 0.950877 0.991937 0.752975 24854 1 76 0.00220663 138 0 6.38945e+07 0.0489088 382396 6.44139e+07 7.58246e+06 24884 3.17557e+07 0 0.197902 0.991937 0.746903 6.38945e+07 0.00372099 1.34902e+07 1.18751e+07 1.35931e+07 160 1.36141e+07 8.11769e+06 0.00296157 1.36494e+07 50.0647 0.00593655 0.994865 0 50.19 GTEX-117YW-2926-SM-5GIEQ 1 B1 2 pieces, adherent meninges 5.9 Brain Brain - Cortex 0001870 1045 480 BP-44261 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4796 02/27/2014 TruSeq.v1 EXCLUDE 0.988645 204066 0.978458 0.991603 0.838234 21740 1 76 0.00265403 194 0 6.9665e+07 0.0213812 5.1325e+06 7.02549e+07 8.52307e+06 21752 3.46471e+07 0 0.140223 0.991603 0.831195 6.9665e+07 0.0037161 1.54015e+07 1.81806e+07 1.54091e+07 250 1.51067e+07 5.48681e+06 0.00318348 1.5892e+07 51.2666 0.0730553 0.99456 0 50.0124 GTEX-117YX-0001-SM-5DU4O B1 Blood Whole Blood 0013756 -104 BP-38957 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/14/2013 LCSET-4834 02/16/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-117YX-0001-SM-7DRQ6 B1 Blood Whole Blood 0013756 -104 BP-38957 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/14/2013 LCSET-6341 01/12/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-117YX-0126-SM-5EGH5 1 B1 2 pieces; well dissected, no fat, focal periadrenal hemorrhage (annotated) 7.9 Adrenal Gland Adrenal Gland 0002369 76 730 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.985698 191577 0.978701 0.990939 0.837769 21027 1 76 0.00250238 111 0 5.33125e+07 0.0209592 1.21555e+06 5.38e+07 8.26771e+06 21041 2.64548e+07 0 0.140932 0.990939 0.830178 5.33125e+07 0.00580027 1.18617e+07 6.81742e+06 1.17614e+07 128 1.18216e+07 8.65916e+06 0.00414261 1.20538e+07 50.4863 0.0225939 0.996181 0 49.7877 GTEX-117YX-0226-SM-5EGH6 1 B1 2 pieces; well dissected, no fat 7 Pancreas Pancreas 0001150 80 726 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.984932 163366 0.981925 0.989797 0.865036 21270 1 76 0.00245625 100 0 6.76799e+07 0.017822 282624 6.83776e+07 1.05941e+07 21282 3.36047e+07 0 0.116889 0.989797 0.85621 6.76799e+07 0.00568376 1.55424e+07 1.59061e+07 1.55686e+07 118 1.56067e+07 1.90855e+07 0.00406207 1.58312e+07 50.357 0.00413328 0.994662 0 50.0422 GTEX-117YX-0326-SM-5GICL 1 B1 6 pieces, 5 with lymphoid tissue [labeled] 8 Small Intestine Small Intestine - Terminal Ileum 0001211 84 722 BP-44261 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4796 02/27/2014 TruSeq.v1 RNASEQ 0.991206 176555 0.977144 0.993604 0.839805 22137 1 76 0.00263017 136 0 5.99792e+07 0.0225539 354833 6.03652e+07 7.34087e+06 22148 2.98518e+07 0 0.137339 0.993604 0.834434 5.99792e+07 0.0034064 1.31108e+07 5.6639e+06 1.31884e+07 142 1.31861e+07 1.07777e+07 0.00301735 1.32481e+07 50.1173 0.0058781 0.996003 0 50.1475 GTEX-117YX-0526-SM-5EGJH 1 B1 5 pieces: all have muscularis, 2 have mucosa [not target] 7.3 Colon Colon - Sigmoid 0001159 88 718 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.991521 248290 0.976664 0.993912 0.833986 22021 1 76 0.00184058 147 0 6.68199e+07 0.0230281 395412 6.72292e+07 5.57605e+06 22034 3.32512e+07 0 0.142678 0.993912 0.828909 6.68199e+07 0.00288098 1.45204e+07 5.97036e+06 1.46645e+07 160 1.46384e+07 1.22169e+07 0.00235952 1.46974e+07 50.1006 0.00588155 0.996304 0 50.2468 GTEX-117YX-0626-SM-5EGJI 1 B1 6 pieces; thick (up to 0.5 mm) fibrous layers 50% of area 7.9 Heart Heart - Atrial Appendage 0006631 90 716 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.988401 278995 0.983418 0.992099 0.852696 22021 1 76 0.0020182 269 0 9.16541e+07 0.0162868 1.9582e+06 9.2384e+07 8.81048e+06 22036 4.55666e+07 0 0.130722 0.992099 0.845959 9.16541e+07 0.00297344 1.96137e+07 2.04043e+07 1.96718e+07 268 1.95844e+07 1.55857e+07 0.00249404 1.99896e+07 50.512 0.0211963 0.995797 0 50.0739 GTEX-117YX-0726-SM-5GIET 0 B1 2 pieces; 1 fatty, 1 fibrofatty 8.8 Adipose Tissue Adipose - Visceral (Omentum) 0010414 91 715 BP-44261 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4796 02/27/2014 TruSeq.v1 RNASEQ 0.991758 222566 0.981685 0.993704 0.864285 21887 1 76 0.00258349 168 0 7.27654e+07 0.0179832 283883 7.32264e+07 8.71398e+06 21900 3.62373e+07 0 0.1174 0.993704 0.858844 7.27654e+07 0.00311052 1.62419e+07 6.68688e+06 1.63029e+07 179 1.6303e+07 1.51605e+07 0.00284649 1.63812e+07 50.1196 0.00387678 0.99565 0 50.0938 GTEX-117YX-0826-SM-5H11J 1 B1 6 pieces, 2 without mucosa 8.5 Colon Colon - Transverse 0001157 92 714 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.990207 263149 0.97836 0.992988 0.851581 22415 1 76 0.00204504 212 0 8.21303e+07 0.0212741 413430 8.27102e+07 1.16301e+07 22430 4.08666e+07 0 0.126779 0.992988 0.84561 8.21303e+07 0.00305835 1.79308e+07 7.03082e+06 1.80762e+07 216 1.80944e+07 1.64661e+07 0.00255028 1.8129e+07 50.0478 0.00499854 0.99577 0 50.2018 GTEX-117YX-1026-SM-5H11V 1 B1 6 pieces, all full thickness 7 Stomach Stomach 0000945 101 705 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.988857 198195 0.979179 0.991235 0.840684 22072 1 76 0.00229195 257 0 7.33786e+07 0.0204039 1.03023e+06 7.40274e+07 9.39151e+06 22092 3.65152e+07 0 0.138495 0.991235 0.833315 7.33786e+07 0.00336041 1.66182e+07 3.69819e+07 1.67689e+07 204 1.67787e+07 1.4295e+07 0.0028249 1.67753e+07 49.9949 0.0139169 0.993612 0 50.2257 GTEX-117YX-1126-SM-5H128 1 B1 2 pieces; enlarged nuclei 8.1 Heart Heart - Left Ventricle 0006566 102 704 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.992719 166997 0.987854 0.99445 0.8684 19430 1 76 0.00238139 266 0 8.28208e+07 0.0118889 1.71318e+06 8.3283e+07 1.01682e+07 19435 4.12745e+07 0 0.119454 0.99445 0.86358 8.28208e+07 0.00327135 1.83487e+07 2.04651e+07 1.79982e+07 263 1.78867e+07 1.30661e+07 0.0028256 1.86073e+07 50.9873 0.0205706 0.996181 0 49.5178 GTEX-117YX-1226-SM-5H11S 1 B1 2 pieces 6.6 Thyroid Thyroid 0002046 105 701 BP-43507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/12/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.99002 230852 0.967991 0.992465 0.786047 23063 1 76 0.00211662 152 0 7.00356e+07 0.0317536 508428 7.05674e+07 8.79471e+06 23089 3.48512e+07 0 0.181944 0.992465 0.780124 7.00356e+07 0.00324926 1.53392e+07 7.52272e+06 1.54122e+07 168 1.54105e+07 1.07956e+07 0.00268154 1.55059e+07 50.1543 0.00720486 0.994909 0 50.1187 GTEX-117YX-1326-SM-5H125 1 B1 2 pieces; patchy pneumonia 8.2 Lung Lung 0008952 106 700 BP-43507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/12/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.991825 277258 0.975701 0.993712 0.82753 23407 1 76 0.00228102 206 0 7.95518e+07 0.023848 285965 8.00552e+07 9.7867e+06 23436 3.9611e+07 0 0.148171 0.993712 0.822327 7.95518e+07 0.00320442 1.76982e+07 6.74763e+06 1.78351e+07 205 1.78763e+07 1.4788e+07 0.00274184 1.78015e+07 49.8952 0.0035721 0.995599 0 50.1927 GTEX-117YX-1426-SM-5H12H 1 B1 2 pieces; fibrofatty tissue, no ducts 7.7 Breast Breast - Mammary Tissue 0008367 107 699 BP-43507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/12/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.991119 197338 0.981001 0.993772 0.84789 21405 1 76 0.00215066 146 0 6.2494e+07 0.0187269 480539 6.28856e+07 7.56091e+06 21422 3.10983e+07 0 0.13311 0.993772 0.84261 6.2494e+07 0.00345225 1.38968e+07 6.21198e+06 1.39576e+07 156 1.39618e+07 1.13485e+07 0.00279972 1.40513e+07 50.1598 0.00764147 0.996425 0 50.1091 GTEX-117YX-1526-SM-5H12T 1 B1 2 pieces; glandular hyperplasia 6.1 Prostate Prostate 0002367 110 696 BP-43507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/12/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.990936 253577 0.966081 0.993004 0.764077 24365 1 76 0.00229568 164 0 7.95326e+07 0.0336334 642079 8.00929e+07 9.38154e+06 24395 3.9598e+07 0 0.202004 0.993004 0.758731 7.95326e+07 0.00334823 1.74521e+07 1.1378e+07 1.7603e+07 195 1.75465e+07 1.09297e+07 0.00282086 1.76712e+07 50.1771 0.00801668 0.995072 0 50.2152 GTEX-117YX-1626-SM-5GZZG 0 B1 1 piece, mucosa 8.3 Esophagus Esophagus - Mucosa 0006920 114 692 BP-43507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/12/2013 LCSET-4805 02/27/2014 TruSeq.v1 EXCLUDE 0.990841 295475 0.975894 0.99335 0.829309 21524 1 76 0.00224684 150 0 7.04332e+07 0.0236533 487211 7.09046e+07 8.85601e+06 21541 3.50424e+07 0 0.146585 0.99335 0.823794 7.04332e+07 0.00358585 1.57284e+07 9.40106e+06 1.58958e+07 161 1.59177e+07 1.38245e+07 0.00291466 1.58789e+07 49.939 0.00687136 0.995859 0 50.2647 GTEX-117YX-1726-SM-5GZZS 0 B1 2 pieces; patent lumens, but atherosclerotic; 40% adjacent fat 7.9 Blood Vessel Artery - Coronary 0001621 115 691 BP-43507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/12/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.99171 246204 0.977965 0.993718 0.844307 23528 1 76 0.0021161 208 0 8.7718e+07 0.0216033 407094 8.82725e+07 1.08186e+07 23551 4.36795e+07 0 0.133658 0.993718 0.839003 8.7718e+07 0.00305394 1.95685e+07 7.97118e+06 1.97136e+07 234 1.97574e+07 1.90855e+07 0.00258407 1.96963e+07 49.9226 0.00461179 0.995727 0 50.1847 GTEX-117YX-1826-SM-5H12K 0 B1 1 piece, muscularis 7.8 Esophagus Esophagus - Muscularis 0004648 116 690 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.990195 171084 0.978576 0.992843 0.85564 21464 1 76 0.00204058 168 0 6.90397e+07 0.0210846 533317 6.95373e+07 9.29399e+06 21478 3.43562e+07 0 0.122936 0.992843 0.849516 6.90397e+07 0.00320802 1.50019e+07 5.90351e+06 1.51618e+07 170 1.51514e+07 1.30574e+07 0.00262274 1.51885e+07 50.0611 0.0076695 0.995492 0 50.265 GTEX-117YX-1926-SM-5GIEC 0 B1 4 pieces; well trimmed 6.6 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 116 690 BP-44261 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4796 02/27/2014 TruSeq.v1 RNASEQ 0.987475 166734 0.975052 0.990604 0.826197 22835 1 76 0.00279224 147 0 6.59094e+07 0.0247572 1.11279e+06 6.65345e+07 8.55834e+06 22854 3.27718e+07 0 0.148855 0.990604 0.818434 6.59094e+07 0.00382709 1.45751e+07 7.17093e+06 1.46358e+07 164 1.46044e+07 1.01604e+07 0.00330803 1.48093e+07 50.3484 0.016725 0.993734 0 50.104 GTEX-117YX-2026-SM-5GIEF 0 B1 2 pieces; spermatogenesis 6.8 Testis Testis 0000473 117 689 BP-44261 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4796 02/27/2014 TruSeq.v1 RNASEQ 0.98936 251031 0.949225 0.991935 0.764992 28812 1 76 0.00288964 115 0 5.90793e+07 0.0505298 991241 5.95596e+07 7.6864e+06 28848 2.9396e+07 0 0.184233 0.991935 0.758822 5.90793e+07 0.00343622 1.27914e+07 8.12153e+06 1.28684e+07 128 1.29083e+07 8.94976e+06 0.00316222 1.28909e+07 49.9663 0.0166428 0.994509 0 50.1501 GTEX-117YX-2126-SM-5GIEL 1 B1 2 pieces 6.5 Spleen Spleen 0002106 120 686 BP-44261 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4796 02/27/2014 TruSeq.v1 RNASEQ 0.988598 179832 0.96383 0.990672 0.78126 23507 1 76 0.00353656 133 0 6.81492e+07 0.033695 420743 6.87909e+07 8.11861e+06 23536 3.38422e+07 0 0.18257 0.990672 0.773972 6.81492e+07 0.0041509 1.50388e+07 1.17237e+07 1.51334e+07 153 1.51634e+07 9.61477e+06 0.00384309 1.5145e+07 49.9695 0.00611626 0.992745 0 50.1568 GTEX-117YX-2226-SM-5EGJJ 0 B1 2 pieces, 1 with 20% fibrous tissue 7.4 Adipose Tissue Adipose - Subcutaneous 0002190 144 662 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.987482 334018 0.979992 0.991077 0.816417 22320 1 76 0.00198356 173 0 7.44918e+07 0.0196967 489635 7.51625e+07 6.20872e+06 22347 3.70201e+07 0 0.163576 0.991077 0.809132 7.44918e+07 0.00304518 1.64578e+07 7.95553e+06 1.66231e+07 178 1.66493e+07 1.38508e+07 0.00251245 1.66825e+07 50.0498 0.00651435 0.994672 0 50.2498 GTEX-117YX-2326-SM-5H12W 0 B1 4 pieces; well trimmed 6.4 Skin Skin - Sun Exposed (Lower leg) 0004264 147 659 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.987662 212998 0.97474 0.990522 0.818799 22939 1 76 0.0022215 179 0 7.12971e+07 0.0250351 685275 7.19793e+07 8.9495e+06 22960 3.54526e+07 0 0.155941 0.990522 0.811038 7.12971e+07 0.00369191 1.56786e+07 7.40846e+06 1.57488e+07 181 1.57373e+07 1.14823e+07 0.00295458 1.58887e+07 50.2393 0.00952045 0.993381 0 50.1116 GTEX-117YX-2426-SM-5GZZJ 0 B1 2 pieces; well trimmed 7.3 Nerve Nerve - Tibial 0001323 149 657 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.991113 213708 0.976781 0.993345 0.827639 22798 1 76 0.00206314 185 0 7.64164e+07 0.022913 359666 7.69284e+07 8.72039e+06 22824 3.80314e+07 0 0.149142 0.993345 0.822131 7.64164e+07 0.00332349 1.68741e+07 6.52524e+06 1.70426e+07 190 1.70361e+07 1.39423e+07 0.0026919 1.70456e+07 50.014 0.00467534 0.995578 0 50.2484 GTEX-117YX-2526-SM-5EQ4Q 0 B1 2 pieces, 1 with 40% fibrous tissue 8.3 Muscle Muscle - Skeletal 0011907 154 652 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.99193 253830 0.983526 0.994426 0.871752 19422 1 76 0.00195754 180 0 6.61824e+07 0.0162382 848551 6.65533e+07 7.71174e+06 19427 3.29385e+07 0 0.111774 0.994426 0.866893 6.61824e+07 0.00289765 1.44277e+07 9.41073e+06 1.45604e+07 170 1.45274e+07 1.29234e+07 0.00242641 1.46133e+07 50.1474 0.0127499 0.996921 0 50.2289 GTEX-117YX-2626-SM-5EQ53 1 B1 2 pieces; no sclerosis, well trimmed 7.1 Blood Vessel Artery - Tibial 0007610 151 655 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.990061 230748 0.977018 0.993265 0.839483 21007 1 76 0.00196716 170 0 7.34387e+07 0.0225549 267078 7.39367e+07 9.21937e+06 21022 3.65113e+07 0 0.137535 0.993265 0.833829 7.34387e+07 0.00297689 1.5813e+07 5.79756e+06 1.59604e+07 175 1.59798e+07 1.43152e+07 0.0024704 1.60159e+07 50.0565 0.00361225 0.996469 0 50.2319 GTEX-1192W-0001-SM-58Q7T B1 Blood Whole Blood 0013756 645 BP-39104 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/17/2013 LCSET-4574 01/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-1192W-0001-SM-5DWSN B1 Blood Whole Blood 0013756 645 BP-39104 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/17/2013 GTEx_OM25_Dec_01 01/28/2014 Illumina OMNI SNP Array OMNI GTEX-1192W-0001-SM-6WBTI B1 Blood Whole Blood 0013756 645 BP-39104 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/17/2013 LCSET-6056 09/22/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-1192W-0005-SM-5NQBQ B1 8 Blood Whole Blood 0013756 645 BP-39103 RNA isolation_PAXgene Blood RNA (Manual) 05/17/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.955354 451704 0.977321 0.958825 0.78972 18463 1 76 0.00264578 105 0 8.4174e+07 0.0215172 219172 8.77887e+07 1.37106e+07 18474 4.18188e+07 0 0.187601 0.958825 0.757203 8.4174e+07 0.00611466 1.94671e+07 1.34446e+08 1.97489e+07 136 1.97805e+07 2.16988e+07 0.00437395 1.97433e+07 49.9529 0.00249659 0.962296 0 50.3593 GTEX-1192W-0008-SM-5QGRE B1 9.9 Skin Cells - Cultured fibroblasts EFO_0002009 810 BP-39935 RNA isolation_Trizol Manual (Cell Pellet) 06/14/2013 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.994211 314101 0.978332 0.995397 0.85344 19613 1 76 0.00160036 136 0 6.27473e+07 0.0213544 273903 6.30375e+07 4.49351e+06 19624 3.12783e+07 0 0.124893 0.995397 0.849511 6.27473e+07 0.00233576 1.41126e+07 8.5486e+06 1.41794e+07 136 1.41788e+07 1.60063e+07 0.00196763 1.41934e+07 50.0257 0.00434508 0.996583 0 50.1179 GTEX-1192W-0126-SM-5EGGS 1 B1 2 pieces, no major abnormalities 6.2 Thyroid Thyroid 0002046 674 636 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.975947 258203 0.961997 0.981873 0.698285 24498 1 76 0.00266812 121 0 6.64836e+07 0.0377208 303333 6.7711e+07 9.88726e+06 24544 3.29393e+07 0 0.263711 0.981873 0.685628 6.64836e+07 0.00598754 1.4381e+07 7.406e+06 1.45062e+07 133 1.46364e+07 9.28665e+06 0.00431781 1.46259e+07 49.9822 0.00447982 0.9878 0 50.2167 GTEX-1192W-0226-SM-5EGGT 1 B1 2 pieces, ~10% epicardial fat, delineated 6.8 Heart Heart - Atrial Appendage 0006631 675 635 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.982614 160140 0.978549 0.98742 0.823487 21983 1 76 0.00254922 120 0 6.65437e+07 0.0212126 1.82193e+06 6.73915e+07 9.46868e+06 21998 3.30402e+07 0 0.155062 0.98742 0.813128 6.65437e+07 0.00578305 1.43979e+07 1.01024e+07 1.42351e+07 163 1.42653e+07 9.55728e+06 0.00415826 1.46454e+07 50.6574 0.0270351 0.992226 0 49.7157 GTEX-1192W-0826-SM-5EGHE 1 B1 6 pieces, ~20% fat/fibrous tissue, rep foci delineated 6.3 Esophagus Esophagus - Gastroesophageal Junction 0004550 711 599 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4764 02/09/2014 TruSeq.v1 EXCLUDE 0.970338 151406 0.973463 0.97738 0.7764 23322 1 76 0.00284504 124 0 5.98043e+07 0.026318 1.46034e+06 6.11884e+07 1.04417e+07 23343 2.95812e+07 0 0.197062 0.97738 0.758838 5.98043e+07 0.00661266 1.3253e+07 1.00809e+07 1.33294e+07 147 1.34012e+07 7.01195e+06 0.00471527 1.35773e+07 50.3262 0.0238664 0.984422 0 50.1438 GTEX-1192W-2326-SM-5N9BS 2 B1 2 pieces, reduced spermatogenesis present, moderately autolyzed 6.5 Testis Testis 0000473 788 522 BP-43956 RNA Extraction from Paxgene-derived Lysate Plate Based 09/25/2013 LCSET-4904 03/22/2014 TruSeq.v1 EXCLUDE 0.990606 163092 0.967997 0.991562 0.70559 26376 1 76 0.00307669 144 0 7.80257e+07 0.0316794 294475 7.86896e+07 3.5624e+06 26427 3.88351e+07 0 0.262408 0.991562 0.699636 7.80257e+07 0.00356925 1.72014e+07 7.66272e+06 1.72384e+07 156 1.72078e+07 1.15014e+07 0.00332273 1.73066e+07 50.1431 0.00374223 0.992519 0 50.0536 GTEX-1192W-2626-SM-5Q5AF 0 B1 6 pieces, squamous epithelium is ~60-70microns thick, minimal adherent fat 5.8 Skin Skin - Sun Exposed (Lower leg) 0004264 810 500 BP-44261 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.992534 161665 0.974445 0.993915 0.733893 24027 1 76 0.00208788 160 0 7.66454e+07 0.0252891 240991 7.71146e+07 5.05966e+06 24058 3.81576e+07 0 0.240552 0.993915 0.729427 7.66454e+07 0.00295895 1.69665e+07 7.94677e+06 1.70122e+07 167 1.69812e+07 1.17256e+07 0.00252281 1.71018e+07 50.1769 0.0031251 0.995295 0 50.0672 GTEX-1192W-3026-SM-5GZZV 1 B1 2 pieces, 4x2mm portion of neurohypophysis, delineated; rest is adenohypophysis 5.9 Pituitary Pituitary 0000007 857 453 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.990243 338890 0.945779 0.992562 0.741344 24788 1 76 0.00233762 133 0 6.60448e+07 0.053831 378918 6.65397e+07 7.86177e+06 24823 3.28527e+07 0 0.204436 0.992562 0.73583 6.60448e+07 0.00363635 1.39702e+07 1.85031e+07 1.41596e+07 148 1.41966e+07 9.39545e+06 0.00298547 1.40821e+07 49.7975 0.00569462 0.994881 0 50.3366 GTEX-1192X-0004-SM-58Q7Q B1 Blood Whole Blood 0013756 757 BP-39104 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/17/2013 LCSET-4574 01/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-1192X-0004-SM-5DWSK B1 Blood Whole Blood 0013756 757 BP-39104 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/17/2013 GTEx_OM25_Dec_01 01/28/2014 Illumina OMNI SNP Array OMNI GTEX-1192X-0004-SM-6WBTF B1 Blood Whole Blood 0013756 757 BP-39104 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/17/2013 LCSET-6056 09/22/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-1192X-0005-SM-5NQC3 B1 8.3 Blood Whole Blood 0013756 757 BP-39103 RNA isolation_PAXgene Blood RNA (Manual) 05/17/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.943029 266960 0.987234 0.945071 0.822573 14522 1 76 0.0026588 96 0 9.97216e+07 0.00926193 54377 1.05518e+08 1.44989e+07 14522 4.95169e+07 0 0.164661 0.945071 0.77739 9.97216e+07 0.00571526 2.41171e+07 2.15338e+08 2.45127e+07 150 2.44589e+07 3.14148e+07 0.00418373 2.44042e+07 49.9439 0.000515336 0.947114 0 50.4068 GTEX-1192X-0008-SM-5Q5B7 B1 9.2 Skin Cells - Cultured fibroblasts EFO_0002009 856 BP-39935 RNA isolation_Trizol Manual (Cell Pellet) 06/14/2013 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.993306 416880 0.976543 0.995113 0.858365 20486 1 76 0.00152646 179 0 7.89336e+07 0.0230942 245500 7.93213e+07 5.43109e+06 20503 3.93165e+07 0 0.118178 0.995113 0.85417 7.89336e+07 0.00242582 1.76058e+07 1.18869e+07 1.76533e+07 172 1.76474e+07 2.05467e+07 0.00197532 1.77632e+07 50.1634 0.00309501 0.99692 0 50.0674 GTEX-1192X-0011-R10a-SM-CYKSL B1, A1 8.7 Brain Brain - Frontal Cortex (BA9) 0009834 762 BP-42439 RNA isolation_PAXgene Tissue miRNA 08/19/2013 RIP-Seq GTEX-1192X-0011-R10a-SM-DO941 B1, A1 8.7 Brain Brain - Frontal Cortex (BA9) 0009834 762 BP-42439 RNA isolation_PAXgene Tissue miRNA 08/19/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.99525 903331 0.964768 0.995944 0.876919 22876 1 76 0.00185472 272 0 9.14115e+07 0.0346513 2.80219e+06 9.17837e+07 5.59364e+06 22892 4.55468e+07 0 0.0878493 0.995944 0.873362 9.14115e+07 0.00233239 2.00354e+07 1.43272e+07 2.02121e+07 322 2.02371e+07 1.42256e+07 0.00209339 2.00648e+07 49.7863 0.0305303 0.996638 0 50.2195 GTEX-1192X-0011-R11b-SM-DO935 B1, A1 8.3 Brain Brain - Cerebellar Hemisphere 0002037 762 BP-42439 RNA isolation_PAXgene Tissue miRNA 08/19/2013 LCSET-10341 02/22/2017 TruSeq.v1 EXCLUDE 0.994849 751548 0.957199 0.995497 0.848986 22796 1 76 0.0019328 272 0 9.22871e+07 0.0421437 2.91942e+06 9.27046e+07 5.29553e+06 22813 4.59944e+07 0 0.108213 0.995497 0.845163 9.22871e+07 0.00227799 2.01092e+07 1.80084e+07 2.03323e+07 303 2.03362e+07 1.53339e+07 0.00210528 2.017e+07 49.7948 0.0314917 0.996145 0 50.2759 GTEX-1192X-0011-R5a-SM-DNZZA B1, A1 8.5 Brain Brain - Caudate (basal ganglia) 0001873 762 BP-42276 RNA isolation_PAXgene Tissue miRNA 08/13/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.988557 704451 0.960401 0.992373 0.839317 24937 1 76 0.00233936 272 0 1.08253e+08 0.0391607 4.87563e+06 1.09085e+08 1.0028e+07 24961 5.37902e+07 0 0.121084 0.992373 0.832916 1.08253e+08 0.0044608 2.34644e+07 2.20742e+07 2.38865e+07 314 2.39172e+07 1.45631e+07 0.003396 2.37969e+07 49.8739 0.0446957 0.996189 0 50.4458 GTEX-1192X-0011-R6a-SM-DNZZB B1, A1 8.1 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 762 BP-42276 RNA isolation_PAXgene Tissue miRNA 08/13/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.988555 614676 0.961468 0.992452 0.84211 24933 1 76 0.00236963 273 0 1.10211e+08 0.0381445 5.84448e+06 1.11049e+08 1.05376e+07 24962 5.47648e+07 0 0.119358 0.992452 0.835755 1.10211e+08 0.00454459 2.40211e+07 1.93953e+07 2.42462e+07 311 2.436e+07 1.43443e+07 0.00345284 2.42861e+07 49.924 0.0526295 0.99635 0 50.2332 GTEX-1192X-0011-R7b-SM-DNZZC B1, A1 8.4 Brain Brain - Putamen (basal ganglia) 0001874 762 BP-42276 RNA isolation_PAXgene Tissue miRNA 08/13/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.987557 737626 0.961757 0.991546 0.842781 24412 1 76 0.00249984 273 0 1.12722e+08 0.0378897 7.01224e+06 1.13683e+08 1.15023e+07 24433 5.59996e+07 0 0.118976 0.991546 0.835656 1.12722e+08 0.0043586 2.44677e+07 2.43677e+07 2.50773e+07 325 2.51082e+07 1.39613e+07 0.00342548 2.48315e+07 49.723 0.0616822 0.995534 0 50.6152 GTEX-1192X-0011-R8b-SM-DO11U B1, A1 8.2 Brain Brain - Hypothalamus 0001898 762 BP-42439 RNA isolation_PAXgene Tissue miRNA 08/19/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.987483 758981 0.95947 0.991823 0.843943 25087 1 76 0.00219497 273 0 9.73026e+07 0.0400046 3.49702e+06 9.81047e+07 8.84956e+06 25115 4.83214e+07 0 0.115527 0.991823 0.837043 9.73026e+07 0.00477626 2.13211e+07 1.75377e+07 2.14485e+07 298 2.15976e+07 1.5194e+07 0.00347997 2.15638e+07 49.9609 0.0356457 0.996164 0 50.1489 GTEX-1192X-0011-R9b-SM-DO934 B1, A1 7.3 Brain Brain - Spinal cord (cervical c-1) 0006469 762 BP-42439 RNA isolation_PAXgene Tissue miRNA 08/19/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.995165 652448 0.960862 0.995841 0.830579 23889 1 76 0.0019308 391 0 9.9087e+07 0.0388107 3.65879e+06 9.95008e+07 5.66382e+06 23910 4.9398e+07 0 0.130283 0.995841 0.827125 9.9087e+07 0.0024029 2.19203e+07 1.32955e+07 2.22275e+07 334 2.20481e+07 1.40967e+07 0.00216669 2.21634e+07 50.1304 0.0367714 0.996517 0 50.3479 GTEX-1192X-0226-SM-5H12D 0 B1 6 pieces, trace adherent dermal fat 6 Skin Skin - Sun Exposed (Lower leg) 0004264 856 946 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.987115 215667 0.973327 0.990075 0.789119 23624 1 76 0.00221877 186 0 7.87674e+07 0.026444 341576 7.95571e+07 9.70576e+06 23651 3.91553e+07 0 0.184208 0.990075 0.781286 7.87674e+07 0.00372263 1.72667e+07 8.90707e+06 1.73457e+07 187 1.73748e+07 1.2987e+07 0.00296845 1.74692e+07 50.1354 0.00429347 0.993034 0 50.1141 GTEX-1192X-0326-SM-5H11U 0 B1 2 pieces, adherent discontinuous rims of fat up to ~1mm, delineated 6.2 Nerve Nerve - Tibial 0001323 859 943 BP-43507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/12/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.990234 244937 0.971388 0.992493 0.778647 23088 1 76 0.00211636 164 0 7.15519e+07 0.028349 131572 7.20931e+07 8.80596e+06 23109 3.55964e+07 0 0.192741 0.992493 0.772801 7.15519e+07 0.00323457 1.57491e+07 7.57352e+06 1.58327e+07 165 1.58421e+07 1.21119e+07 0.0026742 1.58998e+07 50.091 0.00182503 0.994752 0 50.1324 GTEX-1192X-0426-SM-5GIEE 0 B1 2 pieces, 5-10% interstitial fat, rep. foci delineated 7.5 Muscle Muscle - Skeletal 0011907 859 943 BP-44261 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4796 02/27/2014 TruSeq.v1 RNASEQ 0.990398 182377 0.98276 0.992862 0.874503 19022 1 76 0.00244022 147 0 6.39848e+07 0.0169634 376901 6.44448e+07 7.73963e+06 19029 3.1848e+07 0 0.108256 0.992862 0.868262 6.39848e+07 0.00313202 1.39666e+07 8.21831e+06 1.39946e+07 156 1.40004e+07 1.31514e+07 0.00278526 1.41072e+07 50.19 0.00584843 0.995327 0 50.0501 GTEX-1192X-0726-SM-5987R 1 B1 2 pieces, no abnormalities 6.5 Heart Heart - Atrial Appendage 0006631 882 920 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.986448 271762 0.981798 0.991649 0.843686 21119 1 76 0.00257228 154 0 7.63365e+07 0.0179375 1.31491e+06 7.69793e+07 1.62978e+07 21134 3.7892e+07 0 0.138112 0.991649 0.836641 7.63365e+07 0.00666631 1.6046e+07 1.08052e+07 1.58621e+07 181 1.59786e+07 1.25205e+07 0.00460856 1.62753e+07 50.4598 0.0170813 0.99685 0 49.7119 GTEX-1192X-1026-SM-5H12P 1 B1 2 pieces diffuse established cirrhosis, and macrovesicular steatosis 6 Liver Liver 0001114 889 913 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 EXCLUDE 0.988434 274767 0.975399 0.991539 0.827567 23149 1 76 0.00214396 152 0 6.74009e+07 0.0241888 158370 6.79761e+07 8.20351e+06 23164 3.34795e+07 0 0.147832 0.991539 0.820565 6.74009e+07 0.00362716 1.48302e+07 6.45587e+06 1.49292e+07 156 1.49837e+07 1.34656e+07 0.00288323 1.49842e+07 50.0009 0.00232979 0.994643 0 50.1664 GTEX-1192X-1126-SM-5EGGU 1 B1 2 pieces, no significant abnormalities 6.8 Thyroid Thyroid 0002046 882 920 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.983677 155452 0.966797 0.988899 0.789334 23303 1 76 0.00238065 120 0 5.82461e+07 0.032873 107868 5.89e+07 9.26154e+06 23324 2.88935e+07 0 0.177463 0.988899 0.780571 5.82461e+07 0.0053868 1.26748e+07 7.13243e+06 1.279e+07 122 1.289e+07 1.12116e+07 0.00387579 1.28634e+07 49.9483 0.00183138 0.99412 0 50.2263 GTEX-1192X-1526-SM-5H11I 1 B1 2 pieces, prominent mesothelial fibrosis/hyperplasia, delineated 5.8 Adipose Tissue Adipose - Visceral (Omentum) 0010414 910 892 BP-43507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/12/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.987187 185068 0.97848 0.990408 0.783512 22924 1 76 0.00226223 148 0 7.15545e+07 0.021159 280382 7.22475e+07 8.7963e+06 22947 3.55527e+07 0 0.194968 0.990408 0.775997 7.15545e+07 0.00351967 1.58417e+07 9.11086e+06 1.59155e+07 161 1.59871e+07 1.29311e+07 0.0028889 1.60011e+07 50.022 0.00388085 0.993629 0 50.1162 GTEX-1192X-1826-SM-5GIE2 1 B1 6 pieces, all muscularis, good specimens 6.2 Esophagus Esophagus - Gastroesophageal Junction 0004550 928 874 BP-44261 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4796 02/27/2014 TruSeq.v1 RNASEQ 0.988135 209345 0.971242 0.991096 0.812027 22249 1 76 0.00272787 127 0 6.06417e+07 0.0285178 644275 6.11865e+07 7.45856e+06 22264 3.01409e+07 0 0.159214 0.991096 0.804797 6.06417e+07 0.00352732 1.31054e+07 6.92418e+06 1.31814e+07 143 1.31948e+07 1.01015e+07 0.0031264 1.32641e+07 50.131 0.0105297 0.994057 0 50.1446 GTEX-1192X-2326-SM-5987X 1 B1 2 pieces, gynecomatoid stromal hyperplasia (encircled), ductal elements present (delineated) 6.2 Breast Breast - Mammary Tissue 0008367 940 862 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.986846 477084 0.971424 0.991039 0.780203 24355 1 76 0.00265025 166 0 8.51135e+07 0.0282869 446190 8.58831e+07 1.53132e+07 24393 4.22476e+07 0 0.191221 0.991039 0.773211 8.51135e+07 0.00612398 1.86402e+07 1.23475e+07 1.87321e+07 184 1.87817e+07 1.43205e+07 0.00437977 1.89319e+07 50.1992 0.00519532 0.995231 0 50.123 GTEX-1192X-2526-SM-59868 3 B1 6 pieces, epithelial component completely autolyzed, abundant lymphoid elements present, rep foci delineated 7.4 Small Intestine Small Intestine - Terminal Ileum 0001211 952 850 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.980833 228083 0.972199 0.985537 0.808212 24513 1 76 0.0027201 154 0 7.616e+07 0.0274467 558192 7.72776e+07 1.61759e+07 24538 3.77866e+07 0 0.163987 0.985537 0.796523 7.616e+07 0.0064038 1.64846e+07 8.73634e+06 1.66045e+07 167 1.66715e+07 1.33746e+07 0.00455316 1.67573e+07 50.1282 0.0072232 0.990241 0 50.1812 GTEX-1192X-2726-SM-5N9DN 0 B1 6 pieces, trace adherent dermal fat. Squamous epithelium averages ~50 microns 6 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 953 849 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.988065 225169 0.974811 0.988902 0.785881 23196 1 76 0.00291886 173 0 7.83834e+07 0.0249905 472586 7.9263e+07 3.66681e+06 23219 3.90198e+07 0 0.18893 0.988902 0.77716 7.83834e+07 0.00350441 1.737e+07 8.86324e+06 1.74141e+07 185 1.73375e+07 1.23102e+07 0.00321139 1.75157e+07 50.2556 0.00596225 0.98974 0 50.0633 GTEX-1192X-2926-SM-5N9BA 1 B1 2 pieces, ~10-15% mucinous glands, all in one section, delineated; rest is skeletal/adipose tissue 8 Salivary Gland Minor Salivary Gland 0006330 958 844 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.990063 199536 0.974143 0.990938 0.810756 22462 1 76 0.00286218 170 0 8.07276e+07 0.0254582 342444 8.14658e+07 3.53501e+06 22486 4.02171e+07 0 0.163387 0.990938 0.803409 8.07276e+07 0.00333262 1.81209e+07 9.93577e+06 1.8215e+07 181 1.81708e+07 1.57063e+07 0.0030972 1.82362e+07 50.0898 0.00420353 0.991813 0 50.1294 GTEX-1192X-3026-SM-5N9BM 2 B1 2 pieces, autolyzing adenohypophysis 7 Pituitary Pituitary 0000007 987 815 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.988856 267465 0.967252 0.989807 0.798033 24738 1 76 0.00272512 154 0 8.11534e+07 0.0324541 118528 8.19891e+07 3.92846e+06 24769 4.03993e+07 0 0.169219 0.989807 0.789899 8.11534e+07 0.00340407 1.64474e+07 9.4462e+06 1.64971e+07 171 1.64695e+07 1.55817e+07 0.00306427 1.65534e+07 50.1271 0.00144566 0.990759 0 50.0755 GTEX-1192X-3126-SM-5N9BY 1 B1 2 pieces, ~5-10% adherent meninges, delineated 7.1 Brain Brain - Cortex 0001870 989 813 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.993036 272682 0.960598 0.993821 0.810165 23797 1 76 0.00284662 200 0 7.37212e+07 0.0390668 1.6983e+06 7.41796e+07 3.41502e+06 23819 3.67283e+07 0 0.150433 0.993821 0.805159 7.37212e+07 0.0032972 1.61599e+07 1.0841e+07 1.62844e+07 203 1.62007e+07 9.8858e+06 0.00307173 1.62994e+07 50.1517 0.0228944 0.994605 0 50.1919 GTEX-1192X-3226-SM-5987D 1 B1 2 pieces, Purkinje cells well visualized 5.9 Brain Brain - Cerebellum 0002037 989 813 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.984573 308960 0.951686 0.988589 0.757435 22988 1 76 0.00292523 128 0 7.04178e+07 0.0479102 1.01132e+06 7.12306e+07 1.43516e+07 23010 3.4965e+07 0 0.194251 0.988589 0.748792 7.04178e+07 0.00635223 1.53104e+07 1.05607e+07 1.53159e+07 153 1.54107e+07 9.25498e+06 0.00463177 1.54757e+07 50.1051 0.0141978 0.992605 0 50.009 GTEX-11DXW-0003-SM-58Q7S C1 Blood Whole Blood 0013756 1076 BP-39216 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/21/2013 LCSET-4574 01/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-11DXW-0003-SM-5DWSM C1 Blood Whole Blood 0013756 1076 BP-39216 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/21/2013 GTEx_OM25_Dec_01 01/28/2014 Illumina OMNI SNP Array OMNI GTEX-11DXW-0006-SM-5NQ7Y C1 8.5 Blood Whole Blood 0013756 1076 BP-39145 RNA isolation_PAXgene Blood RNA (Manual) 05/20/2013 LCSET-4906 03/22/2014 TruSeq.v1 RNASEQ 0.988585 841985 0.959728 0.990252 0.765478 20098 1 76 0.00240676 127 0 7.49335e+07 0.0397575 202834 7.56712e+07 5.84773e+06 20110 3.72996e+07 0 0.19425 0.990252 0.758016 7.49335e+07 0.00358549 1.65616e+07 5.89506e+07 1.68886e+07 141 1.68857e+07 1.55353e+07 0.00299513 1.67122e+07 49.7419 0.00268047 0.991919 0 50.4888 GTEX-11DXW-0008-SM-5Q59V C1 9.1 Skin Cells - Cultured fibroblasts EFO_0002009 1091 BP-39935 RNA isolation_Trizol Manual (Cell Pellet) 06/14/2013 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.984589 1.50592e+06 0.872123 0.986926 0.715705 20655 1 76 0.00153109 144 0 8.15542e+07 0.127017 393554 8.26346e+07 6.46599e+06 20664 4.05813e+07 0 0.156417 0.986926 0.706348 8.15542e+07 0.00256246 1.59846e+07 1.07897e+08 1.67384e+07 144 1.67652e+07 1.75549e+07 0.00204555 1.61542e+07 49.072 0.00476258 0.989263 0 51.1519 GTEX-11DXW-0011-R10a-SM-AHZNX C1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 1080 ChIP-Seq GTEX-11DXW-0011-R1a-SM-DNZZD C1, A1 7.5 Brain Brain - Hippocampus 0001954 1080 BP-42276 RNA isolation_PAXgene Tissue miRNA 08/13/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.989099 530455 0.965193 0.992602 0.855374 23479 1 76 0.00246597 271 0 9.86168e+07 0.0344972 9.02667e+06 9.93518e+07 8.55692e+06 23497 4.90241e+07 0 0.109818 0.992602 0.849047 9.86168e+07 0.00418961 2.1514e+07 2.13656e+07 2.20606e+07 312 2.20586e+07 9.35462e+06 0.00332475 2.18077e+07 49.7141 0.0908557 0.996106 0 50.6272 GTEX-11DXW-0011-R3b-SM-DNZZE C1, A1 6.1 Brain Brain - Anterior cingulate cortex (BA24) 0009835 1080 BP-42276 RNA isolation_PAXgene Tissue miRNA 08/13/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.989198 588268 0.961249 0.992606 0.847432 24070 1 76 0.00244151 271 0 9.54121e+07 0.0384387 6.0545e+06 9.61228e+07 8.35385e+06 24092 4.74304e+07 0 0.113816 0.992606 0.841167 9.54121e+07 0.00413852 2.07204e+07 1.91449e+07 2.11681e+07 312 2.11606e+07 9.93931e+06 0.0032871 2.10064e+07 49.8171 0.0629871 0.996015 0 50.5343 GTEX-11DXW-0011-R5b-SM-DO11D C1, A1 6.8 Brain Brain - Caudate (basal ganglia) 0001873 1080 BP-42343 RNA isolation_PAXgene Tissue miRNA 08/14/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.987592 525386 0.965928 0.991714 0.837143 23730 1 76 0.00262029 271 0 1.07217e+08 0.033881 8.98195e+06 1.08113e+08 1.10987e+07 23750 5.32643e+07 0 0.128785 0.991714 0.830206 1.07217e+08 0.00461509 2.30358e+07 3.0903e+07 2.38867e+07 323 2.37442e+07 8.22005e+06 0.00361354 2.35252e+07 49.7684 0.0830795 0.995835 0 50.9067 GTEX-11DXW-0011-R6a-SM-DO11N C1, A1 6.1 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 1080 BP-42343 RNA isolation_PAXgene Tissue miRNA 08/14/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.986404 668901 0.963335 0.991024 0.841065 25273 1 76 0.00246748 377 0 1.24009e+08 0.0364065 7.64677e+06 1.25132e+08 1.26249e+07 25296 6.15756e+07 0 0.12227 0.991024 0.833516 1.24009e+08 0.00502851 2.70715e+07 2.63654e+07 2.75744e+07 340 2.75978e+07 1.19754e+07 0.00374202 2.75333e+07 49.9415 0.0611098 0.995645 0 50.4602 GTEX-11DXW-0011-R7b-SM-DO119 C1, A1 6.8 Brain Brain - Putamen (basal ganglia) 0001874 1080 BP-42343 RNA isolation_PAXgene Tissue miRNA 08/14/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.98808 484736 0.967627 0.992279 0.842352 22994 1 76 0.00255395 374 0 1.03705e+08 0.03223 9.43552e+06 1.04512e+08 9.74391e+06 23013 5.1528e+07 0 0.125275 0.992279 0.835849 1.03705e+08 0.00481472 2.24762e+07 3.1624e+07 2.30455e+07 331 2.30267e+07 6.96975e+06 0.00367955 2.28398e+07 49.7962 0.0902819 0.996479 0 50.6253 GTEX-11DXW-0226-SM-5H122 1 C1 6 pieces, well trimmed, squamous epithelium measures up to 70 microns 7.2 Skin Skin - Sun Exposed (Lower leg) 0004264 1089 1347 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.988433 248790 0.974062 0.991679 0.808707 23144 1 76 0.00210845 175 0 6.94072e+07 0.0257405 224974 6.99895e+07 8.57039e+06 23168 3.44867e+07 0 0.165355 0.991679 0.801978 6.94072e+07 0.00368546 1.52339e+07 7.27642e+06 1.53369e+07 171 1.53689e+07 1.17084e+07 0.00289437 1.54262e+07 50.093 0.0032144 0.994926 0 50.1685 GTEX-11DXW-0326-SM-5H11W 1 C1 2 pieces, ~20 and 30% fibrous with few larger vessels 7.3 Adipose Tissue Adipose - Subcutaneous 0002190 1092 1345 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.991452 179774 0.973575 0.993494 0.792967 22806 1 76 0.00219603 141 0 6.74092e+07 0.0260991 251194 6.78506e+07 8.21688e+06 22828 3.35644e+07 0 0.180608 0.993494 0.787808 6.74092e+07 0.00322581 1.47692e+07 6.57861e+06 1.48334e+07 156 1.48656e+07 1.12571e+07 0.00270986 1.48668e+07 50.0021 0.00370216 0.995537 0 50.1086 GTEX-11DXW-0426-SM-5H12E 1 C1 2 pieces 7.2 Nerve Nerve - Tibial 0001323 1094 1343 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.98858 256710 0.964358 0.991736 0.74204 24307 1 76 0.00219322 162 0 7.2447e+07 0.0353698 210184 7.30507e+07 8.72477e+06 24350 3.60024e+07 0 0.222318 0.991736 0.735908 7.2447e+07 0.00363686 1.58194e+07 6.7426e+06 1.59186e+07 165 1.59662e+07 1.08664e+07 0.00291275 1.59903e+07 50.0376 0.00287723 0.994891 0 50.1563 GTEX-11DXW-0526-SM-5H127 1 C1 2 pieces, few foci of calcification, small attachment of fibrofatty tissue 7.8 Blood Vessel Artery - Tibial 0007610 1096 1342 BP-43507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/12/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.990906 246129 0.975706 0.993114 0.844744 21239 1 76 0.00194667 165 0 7.63256e+07 0.0238893 358020 7.68549e+07 9.22558e+06 21250 3.79745e+07 0 0.130962 0.993114 0.838926 7.63256e+07 0.00330044 1.62615e+07 5.99694e+06 1.64004e+07 183 1.63793e+07 1.50287e+07 0.00262205 1.64483e+07 50.1052 0.00465839 0.995322 0 50.2126 GTEX-11DXW-0626-SM-5N9ER 1 C1 2 pieces, one piece has large central defect (?poor fixation), 2nd is ~10-20% fibrous, no ductal elements noted 5.7 Breast Breast - Mammary Tissue 0008367 1102 1337 BP-43507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/12/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.987049 309144 0.972958 0.988482 0.74042 25071 1 76 0.00414016 206 0 9.05941e+07 0.0267682 655150 9.16497e+07 4.55013e+06 25121 4.50006e+07 0 0.232538 0.988482 0.731892 9.05941e+07 0.00428463 2.01157e+07 9.87528e+06 2.01649e+07 211 2.01332e+07 1.23769e+07 0.00421229 2.02739e+07 50.1741 0.00714841 0.989915 0 50.061 GTEX-11DXW-0726-SM-5H12J 1 C1 2 pieces, one piece is 10-20% internal fat/vessels 8.2 Muscle Muscle - Skeletal 0011907 1105 1334 BP-43507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/12/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.993159 226997 0.982188 0.994983 0.869412 20259 1 76 0.00194913 199 0 8.74485e+07 0.0176018 882693 8.78894e+07 9.54564e+06 20274 4.3572e+07 0 0.112776 0.994983 0.865051 8.74485e+07 0.0028151 1.89672e+07 1.01567e+07 1.89209e+07 249 1.89273e+07 1.80998e+07 0.00238132 1.91099e+07 50.24 0.0100432 0.996808 0 49.9388 GTEX-11DXW-0726-SM-CYKR5 1 C1 2 pieces, one piece is 10-20% internal fat/vessels 8.2 Muscle Muscle - Skeletal 0011907 1105 1334 BP-43507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/12/2013 RIP-Seq GTEX-11DXW-0826-SM-5H118 1 C1 6 pieces, few pieces include up to 5-10% fat, rare fungal elements 7.3 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1107 1333 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.989557 266176 0.976552 0.991942 0.75666 24581 1 76 0.00226044 169 0 8.00907e+07 0.023216 347739 8.07413e+07 9.77353e+06 24611 3.98466e+07 0 0.219892 0.991942 0.750564 8.00907e+07 0.00351729 1.77095e+07 8.93209e+06 1.78546e+07 182 1.78912e+07 1.2616e+07 0.00288735 1.78564e+07 49.9513 0.00430683 0.994328 0 50.2041 GTEX-11DXW-1026-SM-5H11K 1 C1 4 pieces, no abnormalities noted 6 Brain Brain - Cerebellum 0002037 1135 1306 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.98896 473487 0.92882 0.991111 0.693857 23630 1 76 0.00245943 129 0 6.84744e+07 0.0708697 924624 6.90886e+07 8.60463e+06 23655 3.40674e+07 0 0.234964 0.991111 0.687689 6.84744e+07 0.00343823 1.448e+07 2.39535e+07 1.4675e+07 151 1.47121e+07 7.41478e+06 0.00294777 1.45814e+07 49.777 0.0133832 0.993261 0 50.3344 GTEX-11DXW-1126-SM-5H12Q 1 C1 4 pieces, adherent meninges 6.6 Brain Brain - Cortex 0001870 1137 1304 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.991852 338198 0.964549 0.994007 0.820932 24450 1 76 0.00226502 268 0 9.45202e+07 0.0351258 3.96889e+06 9.50901e+07 1.24823e+07 24474 4.70568e+07 0 0.143617 0.994007 0.816012 9.45202e+07 0.00324138 2.08256e+07 1.73331e+07 2.07711e+07 325 2.07689e+07 1.02663e+07 0.00275214 2.10184e+07 50.2986 0.0417382 0.996162 0 49.9345 GTEX-11DXW-1126-SM-CYKSD 1 C1 4 pieces, adherent meninges 6.6 Brain Brain - Cortex 0001870 1137 1304 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 RIP-Seq GTEX-11DXW-1226-SM-5H133 1 C1 2 pieces, predominantly adenohypophysis, small detached fragment of neurohypophysis 7 Pituitary Pituitary 0000007 1138 1304 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.990885 342983 0.954915 0.993119 0.737297 25778 1 76 0.00219101 158 0 7.96937e+07 0.0448457 281513 8.02458e+07 9.65204e+06 25819 3.9646e+07 0 0.217618 0.993119 0.732224 7.96937e+07 0.00345534 1.63977e+07 1.10644e+07 1.6535e+07 179 1.65794e+07 1.18962e+07 0.00282176 1.65247e+07 49.9174 0.00350813 0.995354 0 50.2084 GTEX-11DXX-0004-SM-58Q7I B1 Blood Whole Blood 0013756 -32 BP-39216 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/21/2013 LCSET-4574 01/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-11DXX-0004-SM-5DWSD B1 Blood Whole Blood 0013756 -32 BP-39216 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/21/2013 GTEx_OM25_Dec_01 01/29/2014 Illumina OMNI SNP Array OMNI GTEX-11DXX-0004-SM-6WBT9 B1 Blood Whole Blood 0013756 -32 BP-39216 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/21/2013 LCSET-6056 09/21/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-11DXX-0005-SM-5NQ8B B1 8.6 Blood Whole Blood 0013756 -32 BP-39145 RNA isolation_PAXgene Blood RNA (Manual) 05/20/2013 LCSET-4906 03/22/2014 TruSeq.v1 RNASEQ 0.988389 787748 0.953893 0.990389 0.801782 18412 1 76 0.00237965 123 0 7.46074e+07 0.045544 388777 7.53315e+07 5.63443e+06 18420 3.71315e+07 0 0.152112 0.990389 0.794076 7.46074e+07 0.00359183 1.63195e+07 4.94769e+07 1.64757e+07 147 1.64772e+07 1.5621e+07 0.00298452 1.64814e+07 50.0064 0.00516088 0.992389 0 50.238 GTEX-11DXX-0008-SM-5Q5B8 B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 161 BP-40621 RNA isolation_Trizol Manual (Cell Pellet) 07/10/2013 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.992216 448146 0.976879 0.994477 0.86429 20138 1 76 0.00151987 156 0 7.66322e+07 0.0227771 252504 7.70578e+07 5.505e+06 20152 3.81466e+07 0 0.112589 0.994477 0.859516 7.66322e+07 0.00241835 1.71694e+07 1.22454e+07 1.72297e+07 164 1.72438e+07 2.0268e+07 0.00196809 1.73366e+07 50.1342 0.00327681 0.996738 0 50.0876 GTEX-11DXX-0126-SM-5EGH7 0 B1 2 pieces, mild-moderate medullary hyperplasia 8.8 Adrenal Gland Adrenal Gland 0002369 82 531 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.988744 184440 0.977054 0.992579 0.841254 22386 1 76 0.00227616 124 0 5.98722e+07 0.0225406 789182 6.03199e+07 8.18e+06 22400 2.97568e+07 0 0.1358 0.992579 0.835011 5.98722e+07 0.00488367 1.33229e+07 7.12452e+06 1.32272e+07 139 1.32715e+07 1.07931e+07 0.00357488 1.34808e+07 50.3911 0.0130833 0.996413 0 49.8199 GTEX-11DXX-0226-SM-5P9HL 0 B1 2 pieces, some fibrosis 6.5 Thyroid Thyroid 0002046 84 529 BP-43956 RNA Extraction from Paxgene-derived Lysate Plate Based 09/25/2013 LCSET-4916 03/27/2014 TruSeq.v1 RNASEQ 0.991437 237595 0.972107 0.992013 0.779494 24872 1 76 0.00323897 277 0 1.16255e+08 0.027639 561584 1.17191e+08 4.02152e+06 24918 5.79128e+07 0 0.192613 0.992013 0.773268 1.16255e+08 0.00357543 2.55797e+07 1.11758e+07 2.57957e+07 324 2.5629e+07 1.82329e+07 0.0034071 2.58105e+07 50.1764 0.00479205 0.992589 0 50.2103 GTEX-11DXX-0326-SM-5PNWC 0 B1 2 pieces, focal/mild interstitial fibrosis 7.8 Heart Heart - Left Ventricle 0006566 86 527 BP-43956 RNA Extraction from Paxgene-derived Lysate Plate Based 09/25/2013 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.990328 217185 0.985158 0.992021 0.851739 19635 1 76 0.00210819 270 0 8.04264e+07 0.0146458 2.03926e+06 8.10733e+07 7.46910e+06 19643 4.00741e+07 0 0.133419 0.992021 0.844942 8.04264e+07 0.00305209 1.74884e+07 3.00482e+07 1.76358e+07 269 1.74773e+07 1.17185e+07 0.00257933 1.77755e+07 50.423 0.0251533 0.993713 0 50.2098 GTEX-11DXX-0426-SM-5EQ5F 0 B1 6 pieces 7.2 Blood Vessel Artery - Aorta 0001496 90 523 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.991915 255948 0.975178 0.994321 0.831921 21109 1 76 0.00191322 131 0 6.19366e+07 0.0244876 220597 6.22903e+07 7.64972e+06 21122 3.08146e+07 0 0.143256 0.994321 0.827196 6.19366e+07 0.0029697 1.34782e+07 4.74233e+06 1.35963e+07 147 1.35786e+07 1.12758e+07 0.00244019 1.36401e+07 50.113 0.00354143 0.996727 0 50.218 GTEX-11DXX-0526-SM-5PNVR 0 B1 2 pieces, one piece is up to 30% fat (internal and attached), interstitial fibrosis 6.4 Heart Heart - Atrial Appendage 0006631 86 527 BP-44261 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.992308 196058 0.978796 0.9943 0.84314 20691 1 76 0.0020837 198 0 7.32676e+07 0.0207761 1.32037e+06 7.36876e+07 6.67667e+06 20701 3.64875e+07 0 0.135656 0.9943 0.838334 7.32676e+07 0.00310868 1.55885e+07 1.60705e+07 1.58622e+07 210 1.56801e+07 1.12695e+07 0.00259516 1.5893e+07 50.3371 0.0179185 0.996292 0 50.4352 GTEX-11DXX-0626-SM-5Q5AG 0 B1 2 pieces, some emphysematous change, congestion, minute bone marrow embolism 6 Lung Lung 0008952 93 520 BP-44261 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.989664 152432 0.973404 0.992205 0.812587 23047 1 76 0.00192141 136 0 6.74479e+07 0.0262514 294671 6.79778e+07 5.19673e+06 23067 3.35567e+07 0 0.160817 0.992205 0.806253 6.74479e+07 0.00286542 1.4913e+07 5.48902e+06 1.50023e+07 158 1.49869e+07 1.22626e+07 0.0023922 1.50932e+07 50.1768 0.00433482 0.994746 0 50.1492 GTEX-11DXX-0726-SM-5H12X 0 B1 2 pieces 5.8 Spleen Spleen 0002106 95 518 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.987234 242973 0.962763 0.990676 0.741138 23639 1 76 0.00241396 130 0 6.57745e+07 0.0367475 479227 6.63936e+07 8.44193e+06 23671 3.26737e+07 0 0.221625 0.990676 0.734227 6.57745e+07 0.00378772 1.44141e+07 7.94774e+06 1.44562e+07 151 1.44993e+07 9.25779e+06 0.00309845 1.45894e+07 50.155 0.00721797 0.994117 0 50.073 GTEX-11DXX-0826-SM-5GZZP 0 B1 4 pieces, calcific atherosclerosis with narrowing of the lumen ~60%, attached adipose tissue up to 2 mm 7.3 Blood Vessel Artery - Coronary 0001621 98 515 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.990667 240160 0.976341 0.9934 0.850796 22074 1 76 0.00195671 171 0 7.92629e+07 0.0232967 365469 7.97896e+07 9.67004e+06 22084 3.94302e+07 0 0.125545 0.9934 0.84518 7.92629e+07 0.00333696 1.71697e+07 6.13604e+06 1.73403e+07 188 1.73328e+07 1.64794e+07 0.00264494 1.7388e+07 50.0795 0.00458041 0.996133 0 50.2471 GTEX-11DXX-0926-SM-5H112 1 B1 2 pieces, up to 20% fat, PanIN-1B, diffuse insular amyloidosis, acinar cell nodules 7.1 Pancreas Pancreas 0001150 100 513 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.989746 234282 0.98092 0.99266 0.858749 21214 1 76 0.00219022 111 0 8.64675e+07 0.0186951 211221 8.71068e+07 1.23177e+07 21227 4.30126e+07 0 0.122171 0.99266 0.852446 8.64675e+07 0.00333803 1.99871e+07 2.9657e+07 2.02213e+07 135 2.02364e+07 2.66053e+07 0.00276244 2.02232e+07 49.9837 0.00242485 0.995574 0 50.2912 GTEX-11DXX-1026-SM-5H11E 0 B1 6 pieces, well trimmed 8.5 Esophagus Esophagus - Muscularis 0004648 103 510 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.990408 288959 0.977747 0.993049 0.845256 21949 1 76 0.00202018 211 0 8.45858e+07 0.0219449 636164 8.51779e+07 1.17369e+07 21967 4.20934e+07 0 0.132491 0.993049 0.839381 8.45858e+07 0.00300348 1.82648e+07 7.53237e+06 1.83528e+07 249 1.83634e+07 1.55641e+07 0.00251052 1.84678e+07 50.1418 0.00746865 0.99569 0 50.1201 GTEX-11DXX-1126-SM-5GZZK 1 B1 6 pieces, acute erosive esophagitis, oncocytic metaplasia of submucosal glands 9.1 Esophagus Esophagus - Mucosa 0006920 105 508 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.988642 281343 0.977672 0.990911 0.851169 22634 1 76 0.00216748 281 0 9.20029e+07 0.0219448 465783 9.28468e+07 1.26409e+07 22651 4.58058e+07 0 0.126503 0.990911 0.843433 9.20029e+07 0.0031569 2.0756e+07 1.44790e+07 2.08867e+07 259 2.09532e+07 1.99931e+07 0.00266106 2.08864e+07 49.9202 0.00501668 0.993179 0 50.157 GTEX-11DXX-1226-SM-5GICD 1 B1 6 pieces, detached fragments of squamous cells/neutrophils 8.1 Esophagus Esophagus - Gastroesophageal Junction 0004550 109 504 BP-44261 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4796 02/27/2014 TruSeq.v1 RNASEQ 0.991836 273647 0.978363 0.99409 0.856533 22092 1 76 0.00252393 212 0 8.34248e+07 0.021342 535837 8.39208e+07 9.97655e+06 22108 4.15317e+07 0 0.121829 0.99409 0.851471 8.34248e+07 0.00310473 1.82878e+07 7.49401e+06 1.83863e+07 241 1.83907e+07 1.62226e+07 0.00281367 1.84646e+07 50.1002 0.00638503 0.996343 0 50.1343 GTEX-11DXX-1326-SM-5GIDZ 1 B1 6 pieces, mild chronic active gastritis 6.2 Stomach Stomach 0000945 112 501 BP-44261 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4796 02/27/2014 TruSeq.v1 RNASEQ 0.988905 231980 0.971561 0.99085 0.805481 22510 1 76 0.00309247 164 0 6.08174e+07 0.0273537 513687 6.1379e+07 7.43367e+06 22529 3.02569e+07 0 0.16608 0.99085 0.798111 6.08174e+07 0.0036281 1.36554e+07 1.89461e+07 1.366e+07 146 1.36667e+07 1.05774e+07 0.00335976 1.37653e+07 50.1799 0.00836909 0.992796 0 50.0085 GTEX-11DXX-1426-SM-5GIDU 1 B1 3 pieces, corpora albicantia/corpora fibrosa, hilum 7.3 Ovary Ovary 0000992 117 496 BP-44261 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4796 02/27/2014 TruSeq.v1 RNASEQ 0.991085 240775 0.972823 0.993528 0.810492 23092 1 76 0.00252808 147 0 7.06202e+07 0.0268586 130086 7.10802e+07 8.04536e+06 23122 3.51425e+07 0 0.162332 0.993528 0.805246 7.06202e+07 0.00325676 1.56144e+07 7.01944e+06 1.56986e+07 155 1.57377e+07 1.40827e+07 0.00289152 1.57434e+07 50.0091 0.00183013 0.995972 0 50.1346 GTEX-11DXX-1526-SM-5H115 1 B1 2 pieces, cellular leiomyoma, myometrium only 7.7 Uterus Uterus 0000995 118 495 BP-43507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/12/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.98997 295468 0.971167 0.992731 0.792097 23726 1 76 0.00208703 284 0 9.48279e+07 0.0285352 159743 9.55223e+07 1.29016e+07 23765 4.71833e+07 0 0.17907 0.992731 0.786339 9.48279e+07 0.00326634 2.06969e+07 8.70222e+06 2.08806e+07 262 2.09278e+07 1.70284e+07 0.00267505 2.08981e+07 49.9646 0.00167231 0.995492 0 50.2209 GTEX-11DXX-1626-SM-5H11H 1 B1 6 pieces, good representation of lymphoid tissue, detached fragment of muscularis 7.3 Small Intestine Small Intestine - Terminal Ileum 0001211 124 489 BP-43507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/12/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.988295 281610 0.971043 0.991388 0.785057 24730 1 76 0.00242831 279 0 9.63063e+07 0.028463 915952 9.71429e+07 1.33906e+07 24767 4.78945e+07 0 0.185986 0.991388 0.778296 9.63063e+07 0.00345651 2.12711e+07 1.26892e+07 2.14442e+07 274 2.14605e+07 1.47276e+07 0.0029408 2.15334e+07 50.0848 0.00942892 0.99448 0 50.2026 GTEX-11DXX-1726-SM-5H11T 1 B1 6 pieces 7.4 Vagina Vagina 0000996 125 488 BP-43507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/12/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.991338 202520 0.977695 0.993233 0.816919 23364 1 76 0.00215413 146 0 7.09115e+07 0.0219113 186615 7.13947e+07 8.09844e+06 23383 3.53138e+07 0 0.160776 0.993233 0.811391 7.09115e+07 0.00316926 1.58843e+07 6.89387e+06 1.59961e+07 162 1.60125e+07 1.34935e+07 0.00266072 1.59976e+07 49.9767 0.00261385 0.995127 0 50.1754 GTEX-11DXX-1826-SM-5H126 1 B1 6 pieces, mucosa and submucosa 7 Colon Colon - Transverse 0001157 127 486 BP-43507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/12/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.990582 179213 0.976364 0.992728 0.83887 22452 1 76 0.00242605 210 0 7.68006e+07 0.0226828 1.42217e+06 7.73632e+07 9.39913e+06 22477 3.82173e+07 0 0.137494 0.992728 0.83277 7.68006e+07 0.00351962 1.71454e+07 1.01912e+07 1.71975e+07 230 1.71523e+07 1.14306e+07 0.00297165 1.734e+07 50.272 0.018383 0.994875 0 50.0759 GTEX-11DXX-1926-SM-5EGJK 1 B1 6 pieces, well trimmed, but detached fragments of colonic epithelium 7.4 Colon Colon - Sigmoid 0001159 131 482 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.990611 252445 0.975406 0.992781 0.837354 22406 1 76 0.00178137 218 0 8.11256e+07 0.0243007 462379 8.17155e+07 6.37006e+06 22426 4.03856e+07 0 0.138051 0.992781 0.83131 8.11256e+07 0.00265711 1.75928e+07 7.23678e+06 1.77167e+07 232 1.76799e+07 1.51522e+07 0.00221828 1.77913e+07 50.157 0.0056584 0.994951 0 50.1754 GTEX-11DXX-2026-SM-5EGJL 1 B1 2 pieces, several prominent vessels, small omental lymph nodes 7.7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 132 481 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.989466 230499 0.979023 0.992874 0.856321 22201 1 76 0.00181341 166 0 7.23199e+07 0.0206936 636617 7.2839e+07 6.60438e+06 22213 3.59567e+07 0 0.122702 0.992874 0.850219 7.23199e+07 0.00284362 1.5932e+07 7.47408e+06 1.60161e+07 187 1.59949e+07 1.35706e+07 0.00232675 1.61794e+07 50.2867 0.00874006 0.996282 0 50.1317 GTEX-11DXX-2126-SM-5PNYR 0 B1 6 pieces, up to 10% attached fat, abundant adnexal structures 7.9 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 136 477 BP-43956 RNA Extraction from Paxgene-derived Lysate Plate Based 09/25/2013 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.992997 176992 0.973983 0.993898 0.818511 23687 1 76 0.00311961 291 0 9.64807e+07 0.025803 566778 9.70729e+07 2.63548e+06 23716 4.80845e+07 0 0.155472 0.993898 0.813517 9.64807e+07 0.00351997 2.12651e+07 1.00604e+07 2.14755e+07 274 2.13708e+07 1.75255e+07 0.00331961 2.14526e+07 50.0955 0.00583868 0.9948 0 50.2461 GTEX-11DXX-2326-SM-5Q5A2 1 B1 2 pieces, few large vessels and nerve, central holes 8.1 Adipose Tissue Adipose - Subcutaneous 0002190 159 454 BP-43956 RNA Extraction from Paxgene-derived Lysate Plate Based 09/25/2013 LCSET-4952 03/29/2014 TruSeq.v1 EXCLUDE 0.990445 235034 0.978961 0.992514 0.83346 22013 1 76 0.00178364 213 0 8.41402e+07 0.0207269 238730 8.47749e+07 6.03007e+06 22031 4.1888e+07 0 0.1455 0.992514 0.827221 8.41402e+07 0.00274821 1.86277e+07 7.91545e+06 1.87391e+07 234 1.87266e+07 1.62063e+07 0.00226492 1.88118e+07 50.1135 0.00281605 0.994583 0 50.1491 GTEX-11DXX-2326-SM-9YFKS 1 B1 2 pieces, few large vessels and nerve, central holes 6.9 Adipose Tissue Adipose - Subcutaneous 0002190 159 454 BP-61198 RNA Extraction from Paxgene-derived Lysate Plate Based 03/03/2015 LCSET-7536,LCSET-7767 08/22/2015 TruSeq.v1 RNASEQ 0.979948 5.79634e+06 0.83351 0.981318 0.66408 22783 1 76 0.0028029 281 0 1.3666e+08 0.165537 1.39808e+06 1.39262e+08 1.6397e+07 22806 6.80915e+07 0 0.16943 0.981318 0.651674 1.3666e+08 0.00355334 2.53201e+07 2.62339e+08 2.61827e+07 312 2.61371e+07 1.8522e+07 0.0031776 2.5636e+07 49.516 0.0100392 0.982689 0 50.8375 GTEX-11DXX-2426-SM-5GZZW 1 B1 6 pieces, some with attached fat (up to 10%), squamous epithelium measures 40-45 microns 6.8 Skin Skin - Sun Exposed (Lower leg) 0004264 161 452 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.988775 281990 0.972598 0.9916 0.793647 24223 1 76 0.00219097 298 0 9.23526e+07 0.0271841 497096 9.31349e+07 1.2702e+07 24252 4.59468e+07 0 0.178952 0.9916 0.78698 9.23526e+07 0.00330057 2.01536e+07 9.58951e+06 2.03606e+07 273 2.03809e+07 1.46802e+07 0.00274419 2.03753e+07 49.9931 0.00533737 0.994425 0 50.2555 GTEX-11DXX-2526-SM-5H119 1 B1 4 pieces, minimal attached adipose tissue 5.8 Nerve Nerve - Tibial 0001323 163 450 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.98542 218040 0.977996 0.988229 0.849786 22235 1 76 0.002003 180 0 7.65656e+07 0.0217223 311276 7.74776e+07 9.80762e+06 22252 3.8064e+07 0 0.128209 0.988229 0.839783 7.65656e+07 0.00336306 1.6855e+07 7.99751e+06 1.70121e+07 188 1.69854e+07 1.53982e+07 0.0026811 1.70999e+07 50.1681 0.00401762 0.991037 0 50.2319 GTEX-11DXX-2626-SM-5Q5A3 1 B1 2 pieces, focal medial calcification, atherosclerosis with narrowing of the lumen by 50-75% 7.2 Blood Vessel Artery - Tibial 0007610 165 448 BP-43956 RNA Extraction from Paxgene-derived Lysate Plate Based 09/25/2013 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.991043 154037 0.977923 0.992995 0.86563 20636 1 76 0.00169037 169 0 7.73935e+07 0.0217045 293138 7.79395e+07 5.32155e+06 20641 3.85212e+07 0 0.112293 0.992995 0.859566 7.73935e+07 0.00270921 1.67213e+07 5.39524e+06 1.68242e+07 198 1.67784e+07 1.5798e+07 0.00219879 1.6911e+07 50.1967 0.0037611 0.994946 0 50.1533 GTEX-11DXX-2726-SM-5PNXO 1 B1 2 pieces, portion of tendon, up to 10% fat 8.7 Muscle Muscle - Skeletal 0011907 166 447 BP-43956 RNA Extraction from Paxgene-derived Lysate Plate Based 09/25/2013 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.992876 234549 0.980256 0.993472 0.881867 20185 1 76 0.00293294 283 0 1.0367e+08 0.0195089 1.38697e+06 1.04351e+08 2.9485e+06 20198 5.16715e+07 0 0.0983886 0.993472 0.87611 1.0367e+08 0.00336199 2.26252e+07 1.30064e+07 2.28307e+07 307 2.27091e+07 2.13464e+07 0.00314733 2.28028e+07 50.103 0.0132914 0.994069 0 50.226 GTEX-11DXY-0004-SM-58Q7Z B1 Blood Whole Blood 0013756 867 BP-39216 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/21/2013 LCSET-4574 01/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-11DXY-0004-SM-5DWST B1 Blood Whole Blood 0013756 867 BP-39216 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/21/2013 GTEx_OM25_Dec_01 01/29/2014 Illumina OMNI SNP Array OMNI GTEX-11DXY-0004-SM-6WBTO B1 Blood Whole Blood 0013756 867 BP-39216 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/21/2013 LCSET-6056 10/12/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) EXCLUDE GTEX-11DXY-0006-SM-5NQ8N B1 8.4 Blood Whole Blood 0013756 867 BP-39145 RNA isolation_PAXgene Blood RNA (Manual) 05/20/2013 LCSET-4906 03/22/2014 TruSeq.v1 RNASEQ 0.975357 436042 0.975278 0.977483 0.776251 18671 1 76 0.00231404 102 0 7.41717e+07 0.0240066 270165 7.58803e+07 6.26112e+06 18683 3.69026e+07 0 0.199027 0.977483 0.758773 7.41717e+07 0.00351205 1.70489e+07 9.38212e+07 1.73993e+07 125 1.7419e+07 1.75688e+07 0.00291174 1.72061e+07 49.6925 0.00356041 0.979609 0 50.5086 GTEX-11DXY-0008-SM-5QGR4 B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 963 BP-40621 RNA isolation_Trizol Manual (Cell Pellet) 07/10/2013 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.994451 539749 0.977191 0.995458 0.876833 19842 1 76 0.0015257 217 0 8.88998e+07 0.0224751 349212 8.93055e+07 6.25618e+06 19856 4.4324e+07 0 0.100358 0.995458 0.87285 8.88998e+07 0.00221621 1.9964e+07 1.44661e+07 2.0039e+07 232 2.00195e+07 2.34787e+07 0.00187061 2.00862e+07 50.0832 0.00391031 0.996464 0 50.0938 GTEX-11DXY-0011-R10b-SM-DO12C B1, A1 7 Brain Brain - Frontal Cortex (BA9) 0009834 869 BP-42343 RNA isolation_PAXgene Tissue miRNA 08/14/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.987804 681399 0.964889 0.992015 0.852101 24472 1 76 0.00214778 272 0 1.04821e+08 0.0345239 3.50964e+06 1.05665e+08 1.00638e+07 24492 5.20519e+07 0 0.112789 0.992015 0.845296 1.04821e+08 0.00429423 2.29076e+07 1.61116e+07 2.31338e+07 311 2.32943e+07 1.52677e+07 0.00321645 2.31343e+07 49.8277 0.0332149 0.996226 0 50.2456 GTEX-11DXY-0011-R11a-SM-DNZZN B1, A1 7.6 Brain Brain - Cerebellar Hemisphere 0002037 869 BP-42343 RNA isolation_PAXgene Tissue miRNA 08/14/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.987408 814041 0.950984 0.991049 0.751792 25182 1 76 0.00256017 274 0 1.21123e+08 0.0484735 1.6029e+06 1.22217e+08 1.21159e+07 25229 6.01432e+07 0 0.199192 0.991049 0.745062 1.21123e+08 0.00431459 2.62109e+07 1.61225e+07 2.63153e+07 303 2.65527e+07 1.77566e+07 0.00343415 2.63709e+07 49.8282 0.0131152 0.99469 0 50.0994 GTEX-11DXY-0011-R5b-SM-DNZZL B1, A1 5.6 Brain Brain - Caudate (basal ganglia) 0001873 869 BP-42276 RNA isolation_PAXgene Tissue miRNA 08/13/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.988404 709092 0.959784 0.992233 0.826355 25101 1 76 0.00222451 271 0 1.02748e+08 0.0398065 4.61517e+06 1.03552e+08 9.97556e+06 25129 5.10486e+07 0 0.133429 0.992233 0.819937 1.02748e+08 0.00426543 2.23721e+07 1.98015e+07 2.2619e+07 307 2.2749e+07 1.33972e+07 0.00324103 2.25951e+07 49.8303 0.0445687 0.996063 0 50.2743 GTEX-11DXY-0011-R6a-SM-DNZZF B1, A1 8.3 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 869 BP-42276 RNA isolation_PAXgene Tissue miRNA 08/13/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.987425 1.18417e+06 0.953189 0.991526 0.822567 25847 1 76 0.00228669 274 0 1.2602e+08 0.0463554 5.87998e+06 1.27097e+08 1.27013e+07 25882 6.25867e+07 0 0.130623 0.991526 0.815596 1.2602e+08 0.00432262 2.71969e+07 3.12853e+07 2.75438e+07 329 2.77317e+07 1.66919e+07 0.00330045 2.74819e+07 49.7738 0.0462637 0.995627 0 50.3168 GTEX-11DXY-0011-R7a-SM-DO11L B1, A1 7.3 Brain Brain - Putamen (basal ganglia) 0001874 869 BP-42343 RNA isolation_PAXgene Tissue miRNA 08/14/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.987971 645447 0.962614 0.991721 0.834388 24587 1 76 0.00216799 271 0 1.07022e+08 0.0370695 6.85902e+06 1.07915e+08 9.89274e+06 24612 5.31819e+07 0 0.128226 0.991721 0.82748 1.07022e+08 0.00418665 2.33447e+07 2.30653e+07 2.36314e+07 317 2.37305e+07 1.18949e+07 0.0031735 2.36018e+07 49.864 0.0635594 0.99547 0 50.3051 GTEX-11DXY-0011-R8a-SM-DO11M B1, A1 6.5 Brain Brain - Hypothalamus 0001898 869 BP-42343 RNA isolation_PAXgene Tissue miRNA 08/14/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.988192 722962 0.960481 0.991998 0.834162 25784 1 76 0.00221156 279 0 1.14898e+08 0.0391088 5.33852e+06 1.15825e+08 1.10818e+07 25820 5.70917e+07 0 0.126319 0.991998 0.827487 1.14898e+08 0.00428432 2.51229e+07 1.94379e+07 2.54678e+07 323 2.55369e+07 1.56372e+07 0.00324397 2.54438e+07 49.9087 0.0460912 0.995804 0 50.3409 GTEX-11DXY-0126-SM-5H11Q 1 B1 6 pieces, well trimmed, but some pieces include up to 10% internal fat 7.4 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 880 1160 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.989532 230367 0.978951 0.991876 0.7881 23486 1 76 0.00210461 211 0 8.37039e+07 0.0208015 450962 8.43895e+07 9.88524e+06 23514 4.16468e+07 0 0.190852 0.991876 0.781697 8.37039e+07 0.00345508 1.84029e+07 9.61618e+06 1.84887e+07 208 1.85166e+07 1.36568e+07 0.00277825 1.85711e+07 50.0734 0.00534382 0.994221 0 50.1163 GTEX-11DXY-0226-SM-5H123 1 B1 2 pieces, decreased spermatogenesis and some Sertoli cell-only tubules 5.8 Testis Testis 0000473 882 1158 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.988084 360393 0.947642 0.991184 0.745926 29869 1 76 0.00221283 151 0 7.07095e+07 0.0521351 997504 7.13384e+07 8.09662e+06 29917 3.51378e+07 0 0.201716 0.991184 0.73935 7.07095e+07 0.00374081 1.52615e+07 8.07014e+06 1.52813e+07 168 1.5325e+07 9.603e+06 0.00297443 1.54279e+07 50.1673 0.0139827 0.994284 0 50.0324 GTEX-11DXY-0326-SM-5H12F 1 B1 2 pieces, ~50% fibrous and vascular tissue with chronic inflammatory cells 6.6 Adipose Tissue Adipose - Visceral (Omentum) 0010414 885 1155 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.987346 258347 0.969628 0.990655 0.757003 24791 1 76 0.00221795 156 0 7.29013e+07 0.0300876 334998 7.3589e+07 8.8266e+06 24818 3.62126e+07 0 0.212625 0.990655 0.749929 7.29013e+07 0.00365597 1.59908e+07 7.93207e+06 1.6107e+07 167 1.61709e+07 1.15595e+07 0.00293456 1.61638e+07 49.989 0.00455229 0.993964 0 50.181 GTEX-11DXY-0426-SM-5H12R 2 B1 2 pieces, few collections of lymphocytes 7.2 Thyroid Thyroid 0002046 888 1152 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.988369 298191 0.969954 0.991459 0.747712 24731 1 76 0.00227746 149 0 7.51427e+07 0.0296466 195134 7.579e+07 1.02785e+07 24770 3.73432e+07 0 0.222242 0.991459 0.741325 7.51427e+07 0.00346719 1.65044e+07 8.32166e+06 1.66329e+07 163 1.67271e+07 1.23088e+07 0.00287048 1.66323e+07 49.8579 0.00257467 0.994549 0 50.1939 GTEX-11DXY-0526-SM-5EGGQ 1 B1 2 pieces, congestion 6.8 Liver Liver 0001114 891 1149 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4764,LCSET-5055 02/26/2014 TruSeq.v1 RNASEQ 0.988287 235403 0.972097 0.991125 0.810941 21134 1 76 0.00219979 196 0 7.73114e+07 0.0277806 1.21309e+06 7.80036e+07 8.82006e+06 21155 3.84628e+07 0 0.161156 0.991125 0.803744 7.73114e+07 0.00410465 1.68896e+07 1.46774e+07 1.6602e+07 239 1.65834e+07 1.08059e+07 0.00314949 1.71101e+07 50.7816 0.0155517 0.993963 0 49.5707 GTEX-11DXY-0826-SM-5EGGR 1 B1 2 pieces, few box car nuclei (myocyte hypertrophy), one piece includes ~10% fat/vessels 6 Heart Heart - Left Ventricle 0006566 908 1132 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.978367 129069 0.986817 0.984565 0.845358 19049 1 76 0.00216426 265 0 7.5518e+07 0.013138 6.29278e+06 7.67019e+07 1.2794e+07 19053 3.74604e+07 0 0.141459 0.984565 0.83231 7.5518e+07 0.00574981 1.6762e+07 3.84739e+07 1.64095e+07 305 1.6314e+07 3.80356e+06 0.00394575 1.71948e+07 51.3143 0.082042 0.990762 0 49.4686 GTEX-11DXY-1026-SM-5987V 1 B1 2 pieces, one is predominantly fat and fibrous tissue with only ~10% cardiac muscle, second is ~30% fibrous 6.6 Heart Heart - Atrial Appendage 0006631 906 1134 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.985765 209776 0.981654 0.990836 0.834141 21240 1 76 0.00250858 150 0 6.5788e+07 0.0181853 3.212e+06 6.63965e+07 1.44821e+07 21251 3.26556e+07 0 0.147513 0.990836 0.826496 6.5788e+07 0.00638365 1.45599e+07 1.45662e+07 1.41259e+07 187 1.41632e+07 6.64607e+06 0.0044362 1.47698e+07 51.0482 0.048376 0.995906 0 49.2434 GTEX-11DXY-1126-SM-5987W 1 B1 2 pieces, significant calcific atherosclerosis (? orientation), smaller piece with atherosclerosis and narrowing of the lumen by >50% and partial rim of fat 6.5 Blood Vessel Artery - Coronary 0001621 908 1132 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.97925 272258 0.965579 0.984681 0.802374 23302 1 76 0.00271775 156 0 7.6123e+07 0.0341239 403049 7.73073e+07 1.79711e+07 23329 3.77148e+07 0 0.163205 0.984681 0.790083 7.6123e+07 0.00652604 1.61269e+07 1.10525e+07 1.62815e+07 169 1.6321e+07 1.33007e+07 0.00461139 1.64833e+07 50.2474 0.0052136 0.990113 0 50.2384 GTEX-11DXY-1326-SM-5987Z 0 B1 4 pieces, well trimmed 7.1 Esophagus Esophagus - Gastroesophageal Junction 0004550 915 1125 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.985306 219339 0.969589 0.989733 0.797867 22689 1 76 0.00261872 132 0 6.533e+07 0.0302075 1.22767e+06 6.60077e+07 1.33794e+07 22707 3.24362e+07 0 0.171722 0.989733 0.789675 6.533e+07 0.00624629 1.43524e+07 7.30916e+06 1.42624e+07 158 1.43006e+07 8.58682e+06 0.0044244 1.45804e+07 50.4844 0.0185989 0.99416 0 49.8427 GTEX-11DXY-1426-SM-5N9CN 0 B1 4 pieces, congested 9.1 Esophagus Esophagus - Mucosa 0006920 920 1120 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.992563 223922 0.978841 0.993072 0.737933 21594 1 76 0.00308587 139 0 7.05609e+07 0.0207602 627741 7.10531e+07 3.2602e+06 21618 3.51244e+07 0 0.240908 0.993072 0.732821 7.05609e+07 0.00340245 1.60571e+07 1.03466e+07 1.61159e+07 146 1.60934e+07 1.22415e+07 0.00324408 1.6119e+07 50.0398 0.00883481 0.99358 0 50.0913 GTEX-11DXY-1526-SM-5H129 1 B1 6 pieces, well trimmed 6.7 Esophagus Esophagus - Muscularis 0004648 921 1119 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.986837 184939 0.972587 0.990491 0.801389 22438 1 76 0.00213385 143 0 6.39524e+07 0.027156 510760 6.45664e+07 8.59904e+06 22461 3.17652e+07 0 0.171198 0.990491 0.793769 6.39524e+07 0.00365569 1.3693e+07 5.63258e+06 1.37902e+07 155 1.38074e+07 1.03817e+07 0.00289196 1.39002e+07 50.1675 0.00791062 0.994145 0 50.1768 GTEX-11DXY-1626-SM-5H12L 1 B1 2 pieces, both with ~30% fat and fibrous tissue 6.2 Adrenal Gland Adrenal Gland 0002369 922 1118 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.989198 283608 0.968449 0.991823 0.781527 23160 1 76 0.00210821 154 0 6.82747e+07 0.03135 1.60576e+06 6.88377e+07 8.4822e+06 23189 3.39342e+07 0 0.186921 0.991823 0.775137 6.82747e+07 0.00341173 1.49416e+07 7.96879e+06 1.49698e+07 181 1.4984e+07 8.42756e+06 0.00275825 1.51038e+07 50.1991 0.0233268 0.994447 0 50.0472 GTEX-11DXY-2026-SM-5N9CZ 1 B1 6 pieces, muscularis, attached fat and vessels 5.8 Colon Colon - Sigmoid 0001159 939 1101 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.989924 211673 0.966864 0.990676 0.799596 23583 1 76 0.00282925 266 0 8.57771e+07 0.0329602 1.41476e+06 8.65844e+07 4.38305e+06 23611 4.26884e+07 0 0.167268 0.990676 0.792141 8.57771e+07 0.00347559 1.8503e+07 8.58204e+06 1.86336e+07 256 1.85128e+07 1.07639e+07 0.00315218 1.86894e+07 50.2373 0.0163397 0.991429 0 50.1758 GTEX-11DXY-2326-SM-5GICW 1 B1 2 pieces, 30 and 50% fibrous tissue, no appreciable ducts/lobules 7 Breast Breast - Mammary Tissue 0008367 948 1092 BP-44261 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4796 02/27/2014 TruSeq.v1 RNASEQ 0.987213 217604 0.975936 0.990457 0.820192 22565 1 76 0.0026125 163 0 7.17134e+07 0.0237832 720510 7.24044e+07 9.17000e+06 22590 3.56368e+07 0 0.155744 0.990457 0.812365 7.17134e+07 0.00371041 1.57621e+07 9.09178e+06 1.58565e+07 185 1.5847e+07 1.11881e+07 0.00315966 1.59934e+07 50.2298 0.00995119 0.993701 0 50.1493 GTEX-11DXY-2626-SM-5GIE7 1 B1 4 pieces, well trimmed, minimal fat, squamous epithelium measures 23 to 36 microns 6.6 Skin Skin - Sun Exposed (Lower leg) 0004264 963 1077 BP-44261 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4796 02/27/2014 TruSeq.v1 RNASEQ 0.987445 263143 0.968617 0.990772 0.733182 24355 1 76 0.00281956 157 0 7.30705e+07 0.0311837 303474 7.37511e+07 8.82983e+06 24398 3.62947e+07 0 0.235435 0.990772 0.726416 7.30705e+07 0.00386461 1.58957e+07 8.14642e+06 1.59434e+07 158 1.59967e+07 1.08739e+07 0.00334033 1.60772e+07 50.1255 0.00411484 0.994098 0 50.0748 GTEX-11DXY-2726-SM-5GID2 1 B1 2 pieces 7.1 Muscle Muscle - Skeletal 0011907 964 1076 BP-44261 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4796 02/27/2014 TruSeq.v1 RNASEQ 0.990502 214848 0.980114 0.993455 0.860804 19561 1 76 0.00239715 109 0 5.78052e+07 0.0196595 736351 5.8186e+07 7.24204e+06 19570 2.87581e+07 0 0.11931 0.993455 0.85517 5.78052e+07 0.00326472 1.23963e+07 7.14745e+06 1.23579e+07 132 1.23735e+07 1.17479e+07 0.00282965 1.25352e+07 50.3247 0.0126551 0.996408 0 49.9224 GTEX-11DXY-3026-SM-5N9CB 1 B1 2 pieces, adenohypophysis and neurohypophysis 7.5 Pituitary Pituitary 0000007 1019 1021 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.991855 444369 0.952206 0.99303 0.763336 26443 1 76 0.00286828 274 0 1.05175e+08 0.0475541 371031 1.05913e+08 5.29951e+06 26490 5.23783e+07 0 0.18887 0.99303 0.758016 1.05175e+08 0.00343865 2.1836e+07 2.1587e+07 2.20487e+07 297 2.20346e+07 1.64199e+07 0.00315313 2.19711e+07 49.9279 0.00350315 0.994206 0 50.2424 GTEX-11DXY-3126-SM-5N9BT 1 B1 2 pieces 7.3 Brain Brain - Cerebellum 0002037 1016 1024 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.990966 396684 0.941144 0.991978 0.707643 24693 1 76 0.0030001 200 0 9.02563e+07 0.05854 1.3528e+06 9.09862e+07 4.38125e+06 24726 4.4938e+07 0 0.233501 0.991978 0.701967 9.02563e+07 0.00346643 1.93904e+07 2.0451e+07 1.95644e+07 242 1.95248e+07 1.08409e+07 0.00323303 1.95161e+07 49.9889 0.0148682 0.992991 0 50.2234 GTEX-11DXY-3226-SM-5GIDE 1 B1 2 pieces 7.7 Brain Brain - Cortex 0001870 1016 1024 BP-44261 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4796 02/27/2014 TruSeq.v1 RNASEQ 0.990251 207517 0.968428 0.992564 0.843662 23381 1 76 0.00258326 198 0 6.70521e+07 0.031156 1.79796e+06 6.75544e+07 8.76329e+06 23393 3.3372e+07 0 0.124767 0.992564 0.837389 6.70521e+07 0.00316862 1.48189e+07 8.63114e+06 1.48719e+07 214 1.49002e+07 8.74953e+06 0.00287526 1.49338e+07 50.0563 0.0266149 0.994878 0 50.0892 GTEX-11DXZ-0003-SM-58Q7X B1 Blood Whole Blood 0013756 -43 BP-39216 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/21/2013 LCSET-4574 01/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-11DXZ-0003-SM-5DWSR B1 Blood Whole Blood 0013756 -43 BP-39216 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/21/2013 GTEx_OM25_Dec_01 01/29/2014 Illumina OMNI SNP Array OMNI GTEX-11DXZ-0003-SM-6WBTM B1 Blood Whole Blood 0013756 -43 BP-39216 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/21/2013 LCSET-6056,LCSET-6242 10/06/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) EXCLUDE GTEX-11DXZ-0003-SM-CLTG6 B1 Blood Whole Blood 0013756 -43 BP-39216 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/21/2013 LCSET-9400 08/01/2016 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-11DXZ-0006-SM-5LZZH B1 9.2 Blood Whole Blood 0013756 -43 BP-39145 RNA isolation_PAXgene Blood RNA (Manual) 05/20/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.989299 505362 0.969788 0.990135 0.804221 19887 1 76 0.00345751 117 0 8.20854e+07 0.0296604 137092 8.29032e+07 4.36876e+06 19899 4.0859e+07 0 0.165567 0.990135 0.796287 8.20854e+07 0.00382487 1.87546e+07 6.91052e+07 1.89827e+07 141 1.90252e+07 2.00139e+07 0.00364103 1.87902e+07 49.6893 0.00165364 0.990971 0 50.3023 GTEX-11DXZ-0126-SM-5EGGY 1 B1 2 pieces, foci of hepatocyte necrosis and ballooning degeneration 7.9 Liver Liver 0001114 250 951 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.984785 242930 0.976938 0.989625 0.836217 20450 1 76 0.00298336 104 0 6.08435e+07 0.022842 351636 6.14813e+07 9.35411e+06 20466 3.02073e+07 0 0.140721 0.989625 0.827542 6.08435e+07 0.00614663 1.31305e+07 1.14466e+07 1.30195e+07 124 1.30612e+07 1.21352e+07 0.00455726 1.33579e+07 50.5616 0.0057194 0.994465 0 49.7876 GTEX-11DXZ-0226-SM-5EGGZ 0 B1 2 pieces, one piece is fat, one is adrenal 8.4 Adrenal Gland Adrenal Gland 0002369 251 950 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.983883 180347 0.976946 0.989588 0.814071 22573 1 76 0.00320758 126 0 6.69856e+07 0.0227558 965163 6.76904e+07 1.10691e+07 22586 3.32281e+07 0 0.162875 0.989588 0.805595 6.69856e+07 0.00670384 1.46467e+07 9.16436e+06 1.45696e+07 145 1.46611e+07 1.01892e+07 0.00494563 1.48995e+07 50.4032 0.0142585 0.995293 0 49.868 GTEX-11DXZ-0326-SM-5EGH1 0 B1 2 pieces, larger piece includes up to ~10% fat 8.3 Heart Heart - Atrial Appendage 0006631 268 933 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.987013 159699 0.979236 0.991485 0.820339 21123 1 76 0.00340767 98 0 5.35527e+07 0.0204961 838757 5.40126e+07 7.67504e+06 21139 2.65980e+07 0 0.158896 0.991485 0.813354 5.35527e+07 0.00641388 1.12526e+07 1.03768e+07 1.11534e+07 118 1.10817e+07 8.01764e+06 0.00490399 1.15354e+07 51.0029 0.0155289 0.995958 0 49.7787 GTEX-11DXZ-0426-SM-5987Y 1 B1 6 pieces, some intimal thickening 6.1 Blood Vessel Artery - Aorta 0001496 270 931 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.985879 275459 0.976707 0.98982 0.837932 22408 1 76 0.00286623 170 0 7.9402e+07 0.0228848 193455 8.02186e+07 1.62774e+07 22424 3.94475e+07 0 0.138775 0.98982 0.829402 7.9402e+07 0.00633764 1.69994e+07 7.29963e+06 1.71254e+07 172 1.71967e+07 1.55122e+07 0.00459502 1.72194e+07 50.033 0.0024116 0.99376 0 50.1846 GTEX-11DXZ-0526-SM-5GU7J 1 B1 2 pieces, atheromatous plaque with foamy macrophages and cholesterol clefts, one piece has partial rim of fat (30%) 6.4 Blood Vessel Artery - Coronary 0001621 276 925 BP-44261 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.991324 278136 0.975533 0.993314 0.810145 22692 1 76 0.00213797 137 0 6.71614e+07 0.0240864 176372 6.76134e+07 3.99461e+06 22713 3.34042e+07 0 0.165388 0.993314 0.804728 6.71614e+07 0.00300892 1.45001e+07 4.90556e+06 1.45842e+07 153 1.45362e+07 1.26357e+07 0.00257257 1.46773e+07 50.2416 0.00260853 0.995304 0 50.1447 GTEX-11DXZ-0626-SM-5GU77 0 B1 2 pieces 6.3 Heart Heart - Left Ventricle 0006566 279 922 BP-44261 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.990954 206181 0.981492 0.9938 0.846313 20814 1 76 0.00269666 124 0 6.55389e+07 0.01825 812554 6.59478e+07 4.6627e+06 20830 3.26088e+07 0 0.135179 0.9938 0.841066 6.55389e+07 0.00349582 1.43573e+07 7.41021e+06 1.43881e+07 144 1.43808e+07 1.22294e+07 0.00309509 1.45451e+07 50.2839 0.0123212 0.996646 0 50.0536 GTEX-11DXZ-0726-SM-5N9C4 0 B1 2 pieces, numerous hemosiderin-laden macrophages and interstitial pneumonitis with pneumocyte hyperplasia and fibroblast proliferation 7.8 Lung Lung 0008952 283 918 BP-43956 RNA Extraction from Paxgene-derived Lysate Plate Based 09/25/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.992841 197279 0.973058 0.993703 0.757763 24514 1 76 0.00316891 138 0 7.46549e+07 0.0267156 244239 7.5128e+07 3.66443e+06 24551 3.71926e+07 0 0.215295 0.993703 0.752991 7.46549e+07 0.00368424 1.65925e+07 6.67262e+06 1.66685e+07 154 1.66374e+07 1.24375e+07 0.00342636 1.66872e+07 50.0747 0.00325097 0.994564 0 50.1143 GTEX-11DXZ-0926-SM-5N9CG 0 B1 2 pieces, slight nodularity/fibrosis, smaller piece is ~30% fat and vessels 7 Thyroid Thyroid 0002046 288 913 BP-43956 RNA Extraction from Paxgene-derived Lysate Plate Based 09/25/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.992243 157439 0.960148 0.99305 0.719881 24076 1 76 0.00324254 115 0 6.18575e+07 0.0394509 149616 6.22904e+07 2.89070e+06 24113 3.08064e+07 0 0.240267 0.99305 0.714877 6.18575e+07 0.00365337 1.34288e+07 5.84129e+06 1.34645e+07 122 1.3449e+07 9.43297e+06 0.00344779 1.34924e+07 50.0805 0.00240191 0.993857 0 50.0665 GTEX-11DXZ-1026-SM-5N9D5 0 B1 5 pieces, well trimmed 8.6 Esophagus Esophagus - Gastroesophageal Junction 0004550 293 908 BP-43956 RNA Extraction from Paxgene-derived Lysate Plate Based 09/25/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.992585 162615 0.974354 0.993709 0.827325 22612 1 76 0.00309236 169 0 7.71963e+07 0.0253399 402422 7.7685e+07 3.86006e+06 22630 3.84573e+07 0 0.147029 0.993709 0.822121 7.71963e+07 0.00357699 1.65394e+07 6.48814e+06 1.66324e+07 173 1.65734e+07 1.43547e+07 0.0033344 1.66823e+07 50.1637 0.00518018 0.994833 0 50.1402 GTEX-11DXZ-1226-SM-5H11L 0 B1 7 pieces, includes few submucosal glands with oncocytic change 8.2 Esophagus Esophagus - Mucosa 0006920 297 904 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.990405 263127 0.976127 0.992444 0.810319 22618 1 76 0.00253542 176 0 8.15744e+07 0.0231213 250202 8.21955e+07 1.10044e+07 22638 4.05995e+07 0 0.165808 0.992444 0.804196 8.15744e+07 0.00348382 1.82955e+07 1.34302e+07 1.84108e+07 183 1.84407e+07 1.62181e+07 0.00300864 1.84289e+07 49.984 0.00304399 0.994483 0 50.1571 GTEX-11DXZ-1326-SM-5H11X 1 B1 7 pieces, mucosa and submucosa only, several pieces with good lymphoid component 6.7 Small Intestine Small Intestine - Terminal Ileum 0001211 302 899 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.988932 227442 0.968037 0.991057 0.75791 24365 1 76 0.0032836 151 0 7.37973e+07 0.0312041 620525 7.44632e+07 8.84431e+06 24402 3.67112e+07 0 0.210127 0.991057 0.751132 7.37973e+07 0.00437058 1.62128e+07 1.14525e+07 1.62413e+07 163 1.62457e+07 9.5688e+06 0.00382593 1.63596e+07 50.1747 0.00833331 0.993182 0 50.044 GTEX-11DXZ-1426-SM-5H12A 0 B1 2 pieces 6.7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 305 896 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.989935 221842 0.97683 0.992682 0.812547 23577 1 76 0.00315358 207 0 8.47516e+07 0.0229302 1.08868e+06 8.53764e+07 1.07774e+07 23603 4.21737e+07 0 0.164282 0.992682 0.806601 8.47516e+07 0.00414373 1.83947e+07 1.23676e+07 1.85528e+07 230 1.85866e+07 1.16071e+07 0.00364728 1.85745e+07 49.9837 0.0127516 0.995429 0 50.214 GTEX-11DXZ-1626-SM-5GIDI 1 B1 6 pieces, well trimmed 6.5 Colon Colon - Sigmoid 0001159 306 895 BP-44261 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4796 02/27/2014 TruSeq.v1 RNASEQ 0.991253 259396 0.973811 0.993338 0.818967 23115 1 76 0.00302814 281 0 9.32393e+07 0.0259264 542186 9.38646e+07 1.11377e+07 23142 4.64177e+07 0 0.154844 0.993338 0.813511 9.32393e+07 0.00368264 1.99614e+07 9.3597e+06 2.00742e+07 258 2.00251e+07 1.61758e+07 0.0033547 2.01966e+07 50.2132 0.00577626 0.995424 0 50.1409 GTEX-11DXZ-1726-SM-5H12M 1 B1 6 pieces, all include mucosa and muscularis 6.8 Colon Colon - Transverse 0001157 307 894 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.990216 199900 0.973697 0.992658 0.78467 23624 1 76 0.00337387 216 0 8.36641e+07 0.0256472 1.39808e+06 8.42829e+07 1.05799e+07 23650 4.16271e+07 0 0.189027 0.992658 0.778909 8.36641e+07 0.00434781 1.84322e+07 1.43198e+07 1.8391e+07 220 1.84551e+07 1.03313e+07 0.00385964 1.85696e+07 50.1546 0.0165879 0.9951 0 49.944 GTEX-11DXZ-1826-SM-5H12Y 0 B1 2 pieces 7.5 Prostate Prostate 0002367 316 885 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.991722 214267 0.97385 0.993829 0.818503 22384 1 76 0.00231385 139 0 7.3752e+07 0.025849 275544 7.421e+07 9.51815e+06 22405 3.67166e+07 0 0.155347 0.993829 0.813453 7.3752e+07 0.00331397 1.57229e+07 5.9388e+06 1.58954e+07 162 1.58995e+07 1.40544e+07 0.00281285 1.58664e+07 49.9479 0.00371303 0.995936 0 50.2728 GTEX-11DXZ-1926-SM-5GZZL 0 B1 4 pieces, predominantly fat with ~10-20% fibrous stroma, no ducts 7.7 Breast Breast - Mammary Tissue 0008367 318 883 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.99066 267289 0.976336 0.99302 0.807377 23474 1 76 0.00275567 212 0 8.76248e+07 0.0234027 693792 8.82407e+07 1.04211e+07 23502 4.36128e+07 0 0.168959 0.99302 0.801741 8.76248e+07 0.00381874 1.92249e+07 1.00536e+07 1.92391e+07 232 1.9278e+07 1.38811e+07 0.00328594 1.93874e+07 50.1415 0.00786249 0.99538 0 50.0184 GTEX-11DXZ-2026-SM-5987S 1 B1 6 pieces, well trimmed 7.2 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 320 881 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.983672 421456 0.960919 0.989308 0.780252 23011 1 76 0.00330495 145 0 6.48567e+07 0.038917 520105 6.55576e+07 1.4662e+07 23034 3.21601e+07 0 0.180667 0.989308 0.771909 6.48567e+07 0.00722956 1.39845e+07 1.50591e+07 1.40332e+07 144 1.40847e+07 9.30857e+06 0.00525608 1.42805e+07 50.3453 0.00793355 0.994943 0 50.087 GTEX-11DXZ-2126-SM-59881 0 B1 2 pieces, spermatogenesis is present 8 Testis Testis 0000473 322 879 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.984573 423919 0.931 0.988938 0.734868 32984 1 76 0.00307435 148 0 8.64052e+07 0.0686726 703901 8.73717e+07 2.01865e+07 33045 4.29125e+07 0 0.196133 0.988938 0.726738 8.64052e+07 0.00635227 1.79438e+07 1.32382e+07 1.78539e+07 161 1.8008e+07 1.44573e+07 0.00470607 1.81213e+07 50.1568 0.00805639 0.993303 0 49.8744 GTEX-11DXZ-2226-SM-5EGH2 1 B1 2 pieces 7.2 Adipose Tissue Adipose - Subcutaneous 0002190 328 873 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4764 02/09/2014 TruSeq.v1 EXCLUDE 0.979888 166174 0.9745 0.985204 0.823733 24301 1 76 0.00301952 138 0 5.96927e+07 0.0252504 407376 6.05891e+07 1.01364e+07 24316 2.96136e+07 0 0.150768 0.985204 0.811545 5.96927e+07 0.00634711 1.3002e+07 7.47585e+06 1.30035e+07 134 1.30836e+07 1.02286e+07 0.00467434 1.32181e+07 50.2557 0.00672358 0.99052 0 50.0028 GTEX-11DXZ-2326-SM-5EGGV 1 B1 6 pieces, well trimmed, squamous epithelium measures 45-65 microns 8.1 Skin Skin - Sun Exposed (Lower leg) 0004264 328 873 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.984471 243588 0.977581 0.989767 0.852221 22213 1 76 0.00268962 192 0 7.07459e+07 0.0220073 219583 7.14774e+07 1.07145e+07 22228 3.50892e+07 0 0.12536 0.989767 0.843499 7.07459e+07 0.00623715 1.52604e+07 1.0072e+07 1.53614e+07 161 1.54585e+07 1.37412e+07 0.00445389 1.55167e+07 50.0939 0.00307206 0.995062 0 50.1649 GTEX-11DXZ-2426-SM-5N9DT 0 B1 2 pieces, includes 5-10% internal adipose tissue 8.7 Muscle Muscle - Skeletal 0011907 330 871 BP-43956 RNA Extraction from Paxgene-derived Lysate Plate Based 09/25/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.993561 157941 0.983117 0.994394 0.866232 19245 1 76 0.00323695 132 0 7.65544e+07 0.0165902 695611 7.69859e+07 3.42949e+06 19251 3.81581e+07 0 0.116885 0.994394 0.861376 7.65544e+07 0.00362485 1.61103e+07 9.5723e+06 1.62342e+07 164 1.61168e+07 1.57415e+07 0.00343074 1.62914e+07 50.2693 0.00903556 0.995228 0 50.1916 GTEX-11DXZ-2526-SM-5N9BG 0 B1 2 pieces, includes 5-10% attached and internal fat 7.5 Nerve Nerve - Tibial 0001323 331 870 BP-43956 RNA Extraction from Paxgene-derived Lysate Plate Based 09/25/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.991906 149729 0.96736 0.992754 0.759747 24461 1 76 0.00307994 170 0 8.01849e+07 0.0323496 273667 8.07702e+07 3.71736e+06 24502 3.99287e+07 0 0.207613 0.992754 0.754241 8.01849e+07 0.00356388 1.76076e+07 6.39236e+06 1.76589e+07 173 1.76014e+07 1.28617e+07 0.0033217 1.77335e+07 50.1868 0.00338822 0.993602 0 50.0726 GTEX-11DXZ-2626-SM-59882 0 B1 2 pieces, early atheromatous plaque, attachment of fibrofatty tissue/vessels 7.6 Blood Vessel Artery - Tibial 0007610 333 868 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.985821 227339 0.976035 0.989972 0.825977 21728 1 76 0.00279431 141 0 7.1194e+07 0.0235563 208278 7.19152e+07 1.55002e+07 21745 3.5359e+07 0 0.150058 0.989972 0.817694 7.1194e+07 0.00619567 1.52067e+07 6.26088e+06 1.53241e+07 149 1.5399e+07 1.38361e+07 0.00448786 1.54074e+07 50.0137 0.00289616 0.994123 0 50.1923 GTEX-11DYG-0004-SM-58Q7K C1 Blood Whole Blood 0013756 673 BP-39216 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/21/2013 LCSET-4574 01/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-11DYG-0004-SM-5DWSF C1 Blood Whole Blood 0013756 673 BP-39216 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/21/2013 GTEx_OM25_Dec_01 01/29/2014 Illumina OMNI SNP Array OMNI GTEX-11DYG-0004-SM-6WBTB C1 Blood Whole Blood 0013756 673 BP-39216 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/21/2013 LCSET-6056,LCSET-6242 10/06/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-11DYG-0006-SM-5NQB2 C1 8.1 Blood Whole Blood 0013756 673 BP-39145 RNA isolation_PAXgene Blood RNA (Manual) 05/20/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.956094 628267 0.970143 0.958933 0.776238 18252 1 76 0.00265304 97 0 8.51202e+07 0.0280055 154362 8.87656e+07 1.20899e+07 18257 4.22819e+07 0 0.193905 0.958933 0.744359 8.51202e+07 0.00603702 1.98643e+07 1.41954e+08 1.97563e+07 131 1.97507e+07 2.18051e+07 0.00434002 2.01372e+07 50.4845 0.00173898 0.961771 0 49.8638 GTEX-11DYG-0008-SM-5QGR5 C1 9.9 Skin Cells - Cultured fibroblasts EFO_0002009 782 BP-40621 RNA isolation_Trizol Manual (Cell Pellet) 07/10/2013 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.994058 238361 0.981942 0.995361 0.881655 19945 1 76 0.00178906 176 0 8.13324e+07 0.017685 379997 8.17114e+07 6.00332e+06 19958 4.05419e+07 0 0.100287 0.995361 0.877565 8.13324e+07 0.00257764 1.82698e+07 8.71188e+06 1.836e+07 183 1.8361e+07 2.1826e+07 0.00218283 1.83782e+07 50.0234 0.00465048 0.996664 0 50.1231 GTEX-11DYG-0011-R10b-SM-DNZZO C1, A1 6.4 Brain Brain - Frontal Cortex (BA9) 0009834 686 BP-42343 RNA isolation_PAXgene Tissue miRNA 08/14/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.988055 741580 0.962616 0.992155 0.84934 24568 1 76 0.00304218 377 0 1.13905e+08 0.0369066 5.26006e+06 1.14806e+08 1.16457e+07 24591 5.65676e+07 0 0.113276 0.992155 0.842677 1.13905e+08 0.00510722 2.44907e+07 1.97529e+07 2.49407e+07 334 2.5009e+07 1.51505e+07 0.00407043 2.48319e+07 49.8224 0.0458171 0.996256 0 50.4552 GTEX-11DYG-0011-R11a-SM-DNZZP C1, A1 7.3 Brain Brain - Cerebellar Hemisphere 0002037 686 BP-42343 RNA isolation_PAXgene Tissue miRNA 08/14/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.986656 932757 0.946516 0.990657 0.743348 25144 1 76 0.00289238 275 0 1.17486e+08 0.0529999 1.60358e+06 1.18594e+08 1.24577e+07 25186 5.83202e+07 0 0.203168 0.990657 0.736402 1.17486e+08 0.00497896 2.51956e+07 2.08977e+07 2.5361e+07 293 2.55703e+07 1.64511e+07 0.00393146 2.54102e+07 49.843 0.0135215 0.994658 0 50.1635 GTEX-11DYG-0011-R5a-SM-DO928 C1, A1 8.4 Brain Brain - Caudate (basal ganglia) 0001873 686 BP-42439 RNA isolation_PAXgene Tissue miRNA 08/19/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.995517 811492 0.968218 0.996244 0.876966 22400 1 76 0.00292144 372 0 9.96491e+07 0.0314173 7.22941e+06 1.00025e+08 5.82701e+06 22412 4.9674e+07 0 0.0912519 0.996244 0.873672 9.96491e+07 0.00326638 2.14212e+07 2.35856e+07 2.18888e+07 339 2.18252e+07 1.1805e+07 0.00309379 2.15559e+07 49.6897 0.0722761 0.99697 0 50.5399 GTEX-11DYG-0011-R6a-SM-DO936 C1, A1 6.6 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 686 BP-42439 RNA isolation_PAXgene Tissue miRNA 08/19/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.994992 514738 0.968134 0.995842 0.863314 22502 1 76 0.00277985 210 0 7.55395e+07 0.0315381 6.14182e+06 7.58549e+07 4.49488e+06 22521 3.76435e+07 0 0.104819 0.995842 0.859725 7.55395e+07 0.003165 1.65464e+07 1.06417e+07 1.68944e+07 214 1.67678e+07 1.05835e+07 0.00297226 1.67305e+07 49.9443 0.0809679 0.996691 0 50.5204 GTEX-11DYG-0011-R7b-SM-EXUS6 C1, A1 7.8 Brain Brain - Putamen (basal ganglia) 0001874 686 BP-42439 RNA isolation_PAXgene Tissue miRNA 08/19/2013 LCSET-10976 05/20/2017 TruSeq.v1 RNASEQ 0.991706 802492 0.959758 0.992497 0.854775 23072 1 76 0.00274857 271 0 8.87652e+07 0.039929 6.21031e+06 8.94362e+07 2.07579e+06 23090 4.42295e+07 0 0.104983 0.992497 0.848362 8.87652e+07 0.00323122 1.90316e+07 2.0736e+07 1.95741e+07 312 1.94681e+07 1.02227e+07 0.0029897 1.92005e+07 49.654 0.0694385 0.993289 0 50.7026 GTEX-11DYG-0011-R8a-SM-DO93F C1, A1 6.8 Brain Brain - Hypothalamus 0001898 686 BP-42439 RNA isolation_PAXgene Tissue miRNA 08/19/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.995115 546489 0.968779 0.995925 0.866375 22638 1 76 0.00319966 374 0 9.62042e+07 0.0309821 8.95203e+06 9.65978e+07 5.53892e+06 22654 4.79619e+07 0 0.102403 0.995925 0.862845 9.62042e+07 0.00367752 2.07279e+07 2.09199e+07 2.12478e+07 332 2.09982e+07 8.91021e+06 0.0034384 2.10357e+07 50.0445 0.0926732 0.996735 0 50.6193 GTEX-11DYG-0126-SM-59883 0 C1 6 pieces; well trimmed 7.7 Skin Skin - Sun Exposed (Lower leg) 0004264 781 926 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.981499 287713 0.973809 0.986777 0.826893 22453 1 76 0.00317538 172 0 7.25044e+07 0.0257807 293618 7.3476e+07 1.68861e+07 22482 3.59707e+07 0 0.146916 0.986777 0.815958 7.25044e+07 0.00685671 1.55708e+07 1.2749e+07 1.56367e+07 155 1.5768e+07 1.32988e+07 0.0050062 1.5796e+07 50.0444 0.00399611 0.992055 0 50.1056 GTEX-11DYG-0426-SM-5987J 0 C1 2 pieces 7.5 Nerve Nerve - Tibial 0001323 814 895 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.983092 213931 0.966749 0.988844 0.772419 23304 1 76 0.00296431 134 0 5.60089e+07 0.0329087 209889 5.66407e+07 1.12534e+07 23332 2.77641e+07 0 0.19433 0.988844 0.763802 5.60089e+07 0.00709435 1.2184e+07 6.50218e+06 1.22806e+07 120 1.23801e+07 9.13626e+06 0.00501732 1.23868e+07 50.0136 0.00370562 0.994596 0 50.1975 GTEX-11DYG-0826-SM-5N9GH 1 C1 2 pieces; 1 with 10% internal fat 5.7 Thyroid Thyroid 0002046 850 861 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.987444 315347 0.96977 0.988753 0.758747 25162 1 76 0.00420109 215 0 9.94251e+07 0.0298949 199296 1.00556e+08 5.03674e+06 25205 4.93933e+07 0 0.211022 0.988753 0.750214 9.94251e+07 0.00425903 2.18803e+07 1.14919e+07 2.18905e+07 231 2.18787e+07 1.65395e+07 0.00423003 2.20225e+07 50.1637 0.00198194 0.990063 0 50.0117 GTEX-11DYG-0926-SM-5EGGW 1 C1 2 pieces; 40 and 50% adherent fat 5.8 Blood Vessel Artery - Coronary 0001621 853 859 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.977511 166369 0.960902 0.983386 0.691437 24210 1 76 0.0029334 127 0 6.19675e+07 0.038795 385868 6.30144e+07 1.00508e+07 24246 3.06634e+07 0 0.269466 0.983386 0.679949 6.19675e+07 0.00622327 1.3284e+07 7.72106e+06 1.34325e+07 134 1.35064e+07 7.36988e+06 0.0045685 1.3555e+07 50.0898 0.00612349 0.989261 0 50.278 GTEX-11DYG-1026-SM-5A5JQ 1 C1 2 pieces; 30 and 40% fibrous and adipose content 6.2 Heart Heart - Atrial Appendage 0006631 851 862 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.990377 302410 0.97387 0.993103 0.78569 22730 1 76 0.00257383 158 0 8.75168e+07 0.0258225 1.45486e+06 8.81246e+07 1.09112e+07 22755 4.35426e+07 0 0.18818 0.993103 0.780271 8.75168e+07 0.00459117 1.86651e+07 1.17094e+07 1.88763e+07 187 1.89178e+07 1.53936e+07 0.00357973 1.88463e+07 49.9053 0.0165092 0.995829 0 50.2813 GTEX-11DYG-1226-SM-5N9DC 1 C1 6 pieces; periaortic hemorrhage 6.7 Blood Vessel Artery - Aorta 0001496 858 856 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.989579 181553 0.971605 0.990311 0.76194 22687 1 76 0.00310098 151 0 7.70637e+07 0.0279973 134988 7.78177e+07 3.64501e+06 22713 3.83243e+07 0 0.209666 0.990311 0.754557 7.70637e+07 0.0036692 1.6605e+07 6.53176e+06 1.66689e+07 165 1.65775e+07 1.25545e+07 0.00338488 1.67544e+07 50.2653 0.00173467 0.991043 0 50.096 GTEX-11DYG-1326-SM-5N9DO 1 C1 6 pieces; chronic esophagitis with cystic submucosal ducts [pseudodiverticulosis] 6.8 Esophagus Esophagus - Mucosa 0006920 860 854 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.991225 197225 0.969079 0.992173 0.713373 24821 1 76 0.00317438 150 0 7.71407e+07 0.0306798 327616 7.77493e+07 3.90702e+06 24865 3.83959e+07 0 0.255707 0.992173 0.707789 7.71407e+07 0.00368991 1.71746e+07 8.91093e+06 1.72148e+07 156 1.71708e+07 1.14505e+07 0.0034319 1.72941e+07 50.179 0.00421375 0.993121 0 50.0584 GTEX-11DYG-1426-SM-5A5JR 1 C1 6 pieces; well trimmed muscle 5.9 Esophagus Esophagus - Muscularis 0004648 861 854 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.990882 248422 0.971467 0.993347 0.798117 22708 1 76 0.00232938 134 0 7.29125e+07 0.0282817 558935 7.34008e+07 8.62161e+06 22731 3.62751e+07 0 0.17335 0.993347 0.792807 7.29125e+07 0.00427942 1.54292e+07 7.63754e+06 1.56644e+07 165 1.56519e+07 1.17711e+07 0.00330198 1.56072e+07 49.9286 0.00761483 0.995812 0 50.3782 GTEX-11DYG-1526-SM-5A5JS 0 C1 6 pieces; hair-bearing skin with up to 20% internal subcutaneous fat 6.9 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 863 852 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.985261 231279 0.978585 0.988038 0.849672 22913 1 76 0.00263444 148 0 7.21904e+07 0.0210638 412048 7.30644e+07 8.33603e+06 22935 3.59055e+07 0 0.128913 0.988038 0.839508 7.21904e+07 0.00471019 1.57431e+07 1.00481e+07 1.5923e+07 162 1.59503e+07 1.40485e+07 0.0036694 1.59065e+07 49.9313 0.00563952 0.990815 0 50.2841 GTEX-11DYG-1926-SM-5H12I 1 C1 6 pieces; well trimmed muscle 5.9 Esophagus Esophagus - Gastroesophageal Junction 0004550 868 849 BP-43507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/12/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.98724 236048 0.971249 0.990588 0.784205 24222 1 76 0.00251389 166 0 7.89334e+07 0.0285056 780323 7.96834e+07 1.09549e+07 24245 3.92147e+07 0 0.187044 0.990588 0.776824 7.89334e+07 0.00387142 1.69015e+07 7.48336e+06 1.70542e+07 187 1.7072e+07 1.17514e+07 0.00319036 1.71333e+07 50.0896 0.00979279 0.993936 0 50.2249 GTEX-11DYG-2026-SM-5EGGX 0 C1 2 pieces 7.3 Adipose Tissue Adipose - Visceral (Omentum) 0010414 873 845 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.982527 194257 0.975475 0.987761 0.80356 23652 1 76 0.00273613 142 0 7.1351e+07 0.0241616 255626 7.2235e+07 1.07063e+07 23670 3.53845e+07 0 0.171915 0.987761 0.793725 7.1351e+07 0.00608648 1.55765e+07 8.18876e+06 1.57672e+07 156 1.58567e+07 1.25474e+07 0.00440242 1.58441e+07 49.9802 0.00353881 0.992995 0 50.3041 GTEX-11DYG-2526-SM-5N9BB 3 C1 2 pieces; glands=3; stroma=2 5.7 Prostate Prostate 0002367 886 835 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.988567 210574 0.960169 0.989994 0.751382 25906 1 76 0.0034338 196 0 8.87848e+07 0.039607 1.25574e+06 8.96822e+07 4.6648e+06 25953 4.41534e+07 0 0.208787 0.989994 0.743864 8.87848e+07 0.00409093 1.93994e+07 9.51316e+06 1.9489e+07 209 1.9414e+07 1.12047e+07 0.00376189 1.96013e+07 50.24 0.0140021 0.991422 0 50.1153 GTEX-11DYG-2926-SM-5H132 1 C1 4 pieces; adherent meninges [annotated] 7 Brain Brain - Cerebellum 0002037 915 808 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.989665 439797 0.940284 0.991767 0.696295 24293 1 76 0.00282716 161 0 8.17719e+07 0.0594215 1.48992e+06 8.24507e+07 9.9016e+06 24330 4.06741e+07 0 0.243989 0.991767 0.690563 8.17719e+07 0.00392878 1.74144e+07 1.79019e+07 1.76244e+07 182 1.7659e+07 8.95752e+06 0.0033768 1.75423e+07 49.8342 0.0180705 0.993869 0 50.2997 GTEX-11DYG-3126-SM-5A5L6 2 C1 1 piece; anterior and posterior [marked] 6 Pituitary Pituitary 0000007 918 806 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.990488 258006 0.963361 0.992994 0.775025 24231 1 76 0.00253318 117 0 6.06068e+07 0.0363942 327587 6.10344e+07 7.26614e+06 24261 3.01536e+07 0 0.188336 0.992994 0.769595 6.06068e+07 0.0044329 1.30283e+07 8.11813e+06 1.31841e+07 138 1.32174e+07 9.31068e+06 0.00348064 1.31357e+07 49.845 0.00536725 0.9955 0 50.2972 GTEX-11DZ1-0002-SM-58Q7R C1 Blood Whole Blood 0013756 1041 BP-39216 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/21/2013 LCSET-4574 01/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-11DZ1-0002-SM-5DWSL C1 Blood Whole Blood 0013756 1041 BP-39216 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/21/2013 GTEx_OM25_Dec_01 01/29/2014 Illumina OMNI SNP Array OMNI GTEX-11DZ1-0002-SM-6WBTG C1 Blood Whole Blood 0013756 1041 BP-39216 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/21/2013 LCSET-6056,LCSET-6242 10/06/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) EXCLUDE GTEX-11DZ1-0002-SM-CLTG7 C1 Blood Whole Blood 0013756 1041 BP-39216 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/21/2013 LCSET-9400 08/01/2016 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-11DZ1-0008-SM-5QGR3 C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 1193 BP-40621 RNA isolation_Trizol Manual (Cell Pellet) 07/10/2013 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.994094 274174 0.981378 0.995371 0.869033 18831 1 76 0.00156539 130 0 5.52298e+07 0.0182779 296824 5.54866e+07 3.70304e+06 18842 2.75198e+07 0 0.112345 0.995371 0.86501 5.52298e+07 0.00240646 1.24465e+07 5.82586e+06 1.24974e+07 123 1.24895e+07 1.40064e+07 0.00198539 1.25298e+07 50.0805 0.00534947 0.996649 0 50.1022 GTEX-11DZ1-0011-R10b-SM-DO943 C1, A1 8.1 Brain Brain - Frontal Cortex (BA9) 0009834 1060 BP-42439 RNA isolation_PAXgene Tissue miRNA 08/19/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.994402 445880 0.965176 0.995276 0.852981 22181 1 76 0.00180957 146 0 5.59664e+07 0.0344371 4.03577e+06 5.6232e+07 3.34625e+06 22198 2.78812e+07 0 0.112195 0.995276 0.848951 5.59664e+07 0.00221909 1.22894e+07 8.34220e+06 1.25111e+07 170 1.24808e+07 6.81518e+06 0.00201415 1.23637e+07 49.7643 0.0717699 0.99615 0 50.447 GTEX-11DZ1-0011-R11b-SM-DO11W C1, A1 6.3 Brain Brain - Cerebellar Hemisphere 0002037 1060 BP-42439 RNA isolation_PAXgene Tissue miRNA 08/19/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.985964 759734 0.94676 0.990112 0.743403 24086 1 76 0.00259764 272 0 1.08421e+08 0.0528172 2.34727e+06 1.09503e+08 1.15367e+07 24126 5.38143e+07 0 0.203357 0.990112 0.736052 1.08421e+08 0.00441636 2.33483e+07 1.70124e+07 2.35291e+07 289 2.37043e+07 1.33886e+07 0.00350319 2.35721e+07 49.8602 0.0214356 0.99426 0 50.1928 GTEX-11DZ1-0011-R2a-SM-DNZZM C1, A1 6.8 Brain Brain - Substantia nigra 0002038 1060 BP-42343 RNA isolation_PAXgene Tissue miRNA 08/14/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.988043 502943 0.962272 0.992143 0.843431 23586 1 76 0.00227748 274 0 8.77297e+07 0.0374464 5.94194e+06 8.84244e+07 9.5834e+06 23604 4.35843e+07 0 0.118841 0.992143 0.836805 8.77297e+07 0.00423457 1.91765e+07 1.55514e+07 1.96274e+07 301 1.96485e+07 1.04386e+07 0.00325198 1.94712e+07 49.7734 0.0671979 0.996243 0 50.5809 GTEX-11DZ1-0011-R3a-SM-DNZYY C1, A1 7.1 Brain Brain - Anterior cingulate cortex (BA24) 0009835 1060 BP-42343 RNA isolation_PAXgene Tissue miRNA 08/14/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.987984 639322 0.961067 0.991912 0.845865 24239 1 76 0.00211992 271 0 1.02386e+08 0.0385624 8.50729e+06 1.03221e+08 9.46879e+06 24261 5.08685e+07 0 0.115202 0.991912 0.839023 1.02386e+08 0.00425451 2.23112e+07 1.91782e+07 2.26768e+07 319 2.2728e+07 1.24387e+07 0.00318299 2.26127e+07 49.8729 0.0824184 0.995839 0 50.4063 GTEX-11DZ1-0011-R5a-SM-DO11J C1, A1 7.1 Brain Brain - Caudate (basal ganglia) 0001873 1060 BP-42343 RNA isolation_PAXgene Tissue miRNA 08/14/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.988955 463116 0.963578 0.992728 0.840551 23789 1 76 0.00214385 270 0 9.56634e+07 0.0361982 1.13356e+07 9.63642e+07 9.37566e+06 23810 4.75519e+07 0 0.123027 0.992728 0.834439 9.56634e+07 0.0041009 2.08621e+07 2.04679e+07 2.1472e+07 313 2.14615e+07 1.0041e+07 0.00311866 2.1188e+07 49.6793 0.117632 0.996501 0 50.7203 GTEX-11DZ1-0011-R6b-SM-DNZZG C1, A1 7.3 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 1060 BP-42276 RNA isolation_PAXgene Tissue miRNA 08/13/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.988148 550096 0.9654 0.992104 0.856175 24455 1 76 0.00213715 272 0 1.02572e+08 0.0342266 1.03278e+07 1.03388e+08 9.93567e+06 24478 5.09635e+07 0 0.109226 0.992104 0.849414 1.02572e+08 0.00416968 2.2521e+07 1.77789e+07 2.29403e+07 316 2.30641e+07 1.40929e+07 0.00314936 2.2768e+07 49.6769 0.099894 0.99606 0 50.4612 GTEX-11DZ1-0011-R7a-SM-DNZZH C1, A1 7.7 Brain Brain - Putamen (basal ganglia) 0001874 1060 BP-42276 RNA isolation_PAXgene Tissue miRNA 08/13/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.987576 485244 0.961279 0.991867 0.850842 23427 1 76 0.00214694 269 0 8.77957e+07 0.0384887 1.06321e+07 8.85156e+07 9.16419e+06 23445 4.36146e+07 0 0.110437 0.991867 0.843922 8.77957e+07 0.00440342 1.91066e+07 1.81973e+07 1.9656e+07 309 1.96525e+07 9.37854e+06 0.0032703 1.9439e+07 49.7268 0.120116 0.996158 0 50.7086 GTEX-11DZ1-0011-R8b-SM-DNZZI C1, A1 7.1 Brain Brain - Hypothalamus 0001898 1060 BP-42276 RNA isolation_PAXgene Tissue miRNA 08/13/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.989064 481378 0.963737 0.992704 0.856871 23784 1 76 0.00211365 270 0 9.0309e+07 0.0359484 1.03345e+07 9.09728e+07 8.57722e+06 23800 4.48971e+07 0 0.106866 0.992704 0.850619 9.0309e+07 0.00396442 1.97839e+07 1.7322e+07 2.01982e+07 302 2.02616e+07 1.12332e+07 0.00303564 2.0014e+07 49.6926 0.1136 0.996343 0 50.518 GTEX-11DZ1-0011-R9a-SM-DO933 C1, A1 7.3 Brain Brain - Spinal cord (cervical c-1) 0006469 1060 BP-42439 RNA isolation_PAXgene Tissue miRNA 08/19/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.994164 594168 0.964862 0.994978 0.825395 23778 1 76 0.00197229 276 0 8.33578e+07 0.0348162 5.81965e+06 8.37785e+07 5.25325e+06 23801 4.1542e+07 0 0.139468 0.994978 0.82125 8.33578e+07 0.0022399 1.84442e+07 1.14968e+07 1.88695e+07 290 1.87137e+07 1.10238e+07 0.00210598 1.86646e+07 49.9343 0.0694647 0.995792 0 50.5699 GTEX-11DZ1-0126-SM-5985Q 1 C1 6 pieces; up to 0.5mm subcutaneous fat 7.7 Skin Skin - Sun Exposed (Lower leg) 0004264 1193 610 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.986606 341140 0.976968 0.991233 0.801294 23343 1 76 0.00258701 187 0 7.64814e+07 0.022782 483555 7.71579e+07 1.53699e+07 23369 3.79708e+07 0 0.175674 0.991233 0.794269 7.64814e+07 0.00615765 1.68548e+07 9.17892e+06 1.69643e+07 173 1.70493e+07 1.31004e+07 0.004364 1.71068e+07 50.0842 0.00626708 0.995859 0 50.1619 GTEX-11DZ1-0226-SM-5A5KF 1 C1 2 pieces; 10% fibrovascular content 6.4 Adipose Tissue Adipose - Subcutaneous 0002190 1195 608 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.991345 196522 0.976239 0.993535 0.817109 22793 1 76 0.00199708 211 0 7.93288e+07 0.0234416 283614 7.9845e+07 9.5431e+06 22818 3.94943e+07 0 0.15913 0.993535 0.811827 7.93288e+07 0.00372678 1.74357e+07 8.22787e+06 1.76034e+07 215 1.76152e+07 1.44456e+07 0.00286002 1.75892e+07 49.9631 0.00355206 0.995725 0 50.2393 GTEX-11DZ1-0326-SM-5N9BN 1 C1 2 pieces; fibroadipose with ducts in one; over 90% adipose in other 6.2 Breast Breast - Mammary Tissue 0008367 1208 596 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.990693 215502 0.974546 0.991492 0.809675 22328 1 76 0.00276129 198 0 8.59947e+07 0.0251654 642408 8.67327e+07 4.31268e+06 22343 4.27994e+07 0 0.16487 0.991492 0.802786 8.59947e+07 0.00342291 1.88402e+07 1.02963e+07 1.89272e+07 211 1.8824e+07 1.51687e+07 0.00309184 1.90189e+07 50.2575 0.00740676 0.99229 0 50.1151 GTEX-11DZ1-0426-SM-5H11A 1 C1 2 pieces; emphysema and fibrosis; patchy bronchopneumonia 6.4 Lung Lung 0008952 1218 593 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.987026 298943 0.975159 0.9906 0.794829 23527 1 76 0.0023157 147 0 6.82643e+07 0.024158 187769 6.89121e+07 8.58121e+06 23553 3.38895e+07 0 0.18033 0.9906 0.787357 6.82643e+07 0.00393492 1.50752e+07 6.19208e+06 1.51386e+07 158 1.51931e+07 1.19897e+07 0.00312239 1.52585e+07 50.1074 0.00272476 0.994173 0 50.1049 GTEX-11DZ1-0926-SM-5EQ5R 1 C1 2 pieces; 1 has 20% fat 7.6 Muscle Muscle - Skeletal 0011907 1231 624 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.991124 271051 0.979174 0.993003 0.848224 19941 1 76 0.00172174 180 0 6.80549e+07 0.0205692 1.13903e+06 6.85344e+07 8.15559e+06 19956 3.38944e+07 0 0.13095 0.993003 0.84229 6.80549e+07 0.0025967 1.4821e+07 7.11061e+06 1.48542e+07 168 1.48605e+07 1.36864e+07 0.00215839 1.49317e+07 50.1194 0.0166199 0.994882 0 50.0559 GTEX-11DZ1-2026-SM-5A5KG 2 C1 6 pieces; desquamation 6.3 Esophagus Esophagus - Mucosa 0006920 1266 593 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.9886 321480 0.970576 0.991956 0.782813 24091 1 76 0.00205638 208 0 8.54043e+07 0.0292239 712035 8.60969e+07 1.08873e+07 24116 4.24635e+07 0 0.187764 0.991956 0.776515 8.54043e+07 0.00439995 1.88734e+07 1.27643e+07 1.91513e+07 209 1.91959e+07 1.44572e+07 0.0032242 1.91045e+07 49.8807 0.00827016 0.995311 0 50.3654 GTEX-11DZ1-2426-SM-5GZZX 1 C1 6 pieces 6 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1276 585 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.986975 328868 0.978084 0.989738 0.804532 23181 1 76 0.00205908 180 0 8.07815e+07 0.0217153 491001 8.16191e+07 9.46344e+06 23206 4.01796e+07 0 0.173552 0.989738 0.796276 8.07815e+07 0.00328025 1.79302e+07 9.1136e+06 1.807e+07 199 1.80912e+07 1.42764e+07 0.00266796 1.81301e+07 50.0537 0.00601576 0.992501 0 50.1942 GTEX-11DZ1-2726-SM-5A5KH 2 C1 2 pieces 6.6 Thyroid Thyroid 0002046 1291 571 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.989759 241602 0.966263 0.992591 0.778578 23156 1 76 0.00202121 128 0 6.20193e+07 0.0334335 221621 6.24822e+07 6.92404e+06 23182 3.08439e+07 0 0.187684 0.992591 0.77281 6.20193e+07 0.00402135 1.3505e+07 7.0013e+06 1.371e+07 137 1.37448e+07 1.12163e+07 0.00301842 1.36378e+07 49.8047 0.00354695 0.995423 0 50.3767 GTEX-11DZ1-2926-SM-5A5KI 1 C1 4 pieces; meningeal congestion , possible hemorrhage 6.3 Brain Brain - Cerebellum 0002037 1314 549 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.989174 346398 0.945532 0.991766 0.726017 23394 1 76 0.00227903 155 0 7.1271e+07 0.0541047 1.44793e+06 7.18627e+07 9.30553e+06 23421 3.54471e+07 0 0.219515 0.991766 0.720039 7.1271e+07 0.004114 1.53875e+07 1.32294e+07 1.55186e+07 169 1.55551e+07 8.38993e+06 0.00319412 1.55187e+07 49.9415 0.0201485 0.994358 0 50.2121 GTEX-11EI6-0004-SM-58Q7L C1 Blood Whole Blood 0013756 873 BP-39216 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/21/2013 LCSET-4574 01/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-11EI6-0004-SM-5DWSG C1 Blood Whole Blood 0013756 873 BP-39216 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/21/2013 GTEx_OM25_Dec_01 01/28/2014 Illumina OMNI SNP Array OMNI GTEX-11EI6-0004-SM-6WBTC C1 Blood Whole Blood 0013756 873 BP-39216 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/21/2013 LCSET-6056 09/22/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) EXCLUDE GTEX-11EI6-0004-SM-7FG6D C1 Blood Whole Blood 0013756 873 BP-39216 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/21/2013 LCSET-6831,LCSET-6976 03/19/2015 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-11EI6-0005-SM-5N9GN C1 8.9 Blood Whole Blood 0013756 873 BP-39302 RNA isolation_PAXgene Blood RNA (Manual) 05/23/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.986431 910492 0.967494 0.987872 0.7288 22719 1 76 0.0043081 209 0 1.19303e+08 0.0319338 189336 1.20768e+08 5.61705e+06 22753 5.92813e+07 0 0.238694 0.987872 0.719961 1.19303e+08 0.00442869 2.68141e+07 7.2675e+07 2.70091e+07 222 2.70452e+07 2.35029e+07 0.00436831 2.69588e+07 49.92 0.00156777 0.989313 0 50.1811 GTEX-11EI6-0008-SM-5QGR7 C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 970 BP-40621 RNA isolation_Trizol Manual (Cell Pellet) 07/10/2013 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.995009 160994 0.982109 0.995976 0.874091 18531 1 76 0.00163375 125 0 5.6303e+07 0.0175496 304112 5.65305e+07 3.68238e+06 18539 2.80745e+07 0 0.108018 0.995976 0.870573 5.6303e+07 0.00238082 1.26734e+07 5.5709e+06 1.26983e+07 126 1.26917e+07 1.42566e+07 0.00200692 1.27377e+07 50.0904 0.00537961 0.996942 0 50.049 GTEX-11EI6-0011-R10a-SM-CYKQP C1, A1 6.7 Brain Brain - Frontal Cortex (BA9) 0009834 902 BP-42439 RNA isolation_PAXgene Tissue miRNA 08/19/2013 RIP-Seq GTEX-11EI6-0011-R10a-SM-DO93R C1, A1 6.7 Brain Brain - Frontal Cortex (BA9) 0009834 902 BP-42439 RNA isolation_PAXgene Tissue miRNA 08/19/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.995042 479717 0.969844 0.995761 0.865225 22310 1 76 0.00200946 268 0 7.36805e+07 0.0297176 5.16351e+06 7.39941e+07 4.54920e+06 22322 3.67231e+07 0 0.104619 0.995761 0.861558 7.36805e+07 0.00231876 1.60931e+07 1.39655e+07 1.64996e+07 261 1.63119e+07 8.8689e+06 0.002164 1.63258e+07 50.0214 0.0697827 0.996481 0 50.6236 GTEX-11EI6-0011-R11a-SM-DO11V C1, A1 6.8 Brain Brain - Cerebellar Hemisphere 0002037 902 BP-42439 RNA isolation_PAXgene Tissue miRNA 08/19/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.986924 430691 0.953671 0.991203 0.787069 23368 1 76 0.00250781 268 0 9.52696e+07 0.0460675 5.16473e+06 9.61151e+07 8.8515e+06 23394 4.73081e+07 0 0.166602 0.991203 0.780146 9.52696e+07 0.00491595 2.04511e+07 1.81234e+07 2.08215e+07 310 2.08346e+07 7.62072e+06 0.00370668 2.07771e+07 49.9309 0.0537348 0.995482 0 50.4488 GTEX-11EI6-0011-R1a-SM-DO93L C1, A1 6.3 Brain Brain - Hippocampus 0001954 902 BP-42343 RNA isolation_PAXgene Tissue miRNA 08/14/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.994382 472874 0.969913 0.995271 0.846409 23103 1 76 0.00216552 371 0 9.29487e+07 0.0298762 9.75578e+06 9.33903e+07 5.73074e+06 23119 4.63357e+07 0 0.123504 0.995271 0.842407 9.29487e+07 0.00252286 2.01388e+07 2.4784e+07 2.09014e+07 346 2.06985e+07 7.78782e+06 0.00234403 2.04062e+07 49.6445 0.104462 0.99616 0 50.9291 GTEX-11EI6-0011-R8a-SM-DO93M C1, A1 5.7 Brain Brain - Hypothalamus 0001898 902 BP-42439 RNA isolation_PAXgene Tissue miRNA 08/19/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.994315 334694 0.97868 0.995308 0.853567 21373 1 76 0.00212841 369 0 8.92784e+07 0.0211699 1.02771e+07 8.96992e+07 4.9882e+06 21384 4.45049e+07 0 0.125113 0.995308 0.849562 8.92784e+07 0.00273963 1.93783e+07 3.14214e+07 2.01096e+07 360 1.95756e+07 5.59661e+06 0.00243371 1.99804e+07 50.5117 0.114573 0.996301 0 50.926 GTEX-11EI6-0126-SM-5985R 0 C1 6 pieces, minimal dermal fat; squamous epithelium is ~50microns 7.4 Skin Skin - Sun Exposed (Lower leg) 0004264 969 1438 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.986374 298027 0.970005 0.99118 0.790279 23489 1 76 0.00260657 156 0 6.24459e+07 0.0297473 280048 6.30016e+07 1.14273e+07 23516 3.09932e+07 0 0.179726 0.99118 0.783308 6.24459e+07 0.006432 1.34823e+07 7.68361e+06 1.35438e+07 138 1.36091e+07 1.06248e+07 0.00451001 1.37004e+07 50.1673 0.00444509 0.995985 0 50.1139 GTEX-11EI6-0226-SM-5EQ64 0 C1 2 pieces, ~10-15% fascia/fibrous tissue, rep. delineated 6.8 Adipose Tissue Adipose - Subcutaneous 0002190 971 1437 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.991086 266799 0.974063 0.993386 0.800921 23409 1 76 0.00206801 167 0 7.22241e+07 0.0256025 512348 7.2705e+07 7.55396e+06 23428 3.5934e+07 0 0.173142 0.993386 0.795623 7.22241e+07 0.00302309 1.57874e+07 7.19507e+06 1.59472e+07 176 1.5935e+07 1.20445e+07 0.00254444 1.5958e+07 50.036 0.00704694 0.995685 0 50.2518 GTEX-11EI6-0326-SM-5EQ6G 0 C1 2 pieces, 10-20% interstitial fat, rep foci delineated 8.2 Muscle Muscle - Skeletal 0011907 973 1435 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.992194 219215 0.981285 0.994469 0.852502 19725 1 76 0.00180963 135 0 6.70428e+07 0.0184785 891159 6.74156e+07 8.89073e+06 19732 3.33816e+07 0 0.128783 0.994469 0.847787 6.70428e+07 0.00268601 1.46367e+07 7.23682e+06 1.46466e+07 165 1.4663e+07 1.29983e+07 0.00224682 1.47598e+07 50.1645 0.0132189 0.996744 0 50.0169 GTEX-11EI6-0426-SM-5EQ43 0 C1 2 pieces, only trace fat, good specimens 7.4 Nerve Nerve - Tibial 0001323 974 1435 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.989485 290413 0.967204 0.992455 0.730316 24452 1 76 0.00211617 159 0 7.71814e+07 0.0324847 199558 7.77682e+07 1.01877e+07 24492 3.8358e+07 0 0.236888 0.992455 0.724806 7.71814e+07 0.00316718 1.69237e+07 7.99879e+06 1.70624e+07 166 1.70884e+07 1.19056e+07 0.0026401 1.71167e+07 50.0413 0.00256606 0.995425 0 50.2039 GTEX-11EI6-0526-SM-5985S 0 C1 2 pieces, trace fat, good specimens 5.8 Blood Vessel Artery - Tibial 0007610 978 1437 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.985766 252095 0.974553 0.990232 0.809659 20979 1 76 0.00263924 133 0 7.10027e+07 0.0251384 312352 7.17031e+07 1.57385e+07 20994 3.52519e+07 0 0.164894 0.990232 0.80175 7.10027e+07 0.00617154 1.53225e+07 7.36727e+06 1.54501e+07 149 1.55068e+07 1.31512e+07 0.00439742 1.55628e+07 50.0902 0.00435619 0.994699 0 50.2073 GTEX-11EI6-0626-SM-5985T 0 C1 2 pieces, ~5-10% fascia/fibrous tissue, rep delineated, rest adipose tissue. No ductal elements 6.5 Breast Breast - Mammary Tissue 0008367 983 1432 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.98515 251669 0.972712 0.989565 0.744554 24457 1 76 0.0028132 135 0 7.08124e+07 0.0269852 336107 7.15591e+07 1.52883e+07 24494 3.51527e+07 0 0.228157 0.989565 0.736785 7.08124e+07 0.00619758 1.55977e+07 7.99909e+06 1.56788e+07 145 1.57745e+07 1.11563e+07 0.00449784 1.57978e+07 50.037 0.00469691 0.99398 0 50.1296 GTEX-11EI6-0726-SM-59866 1 C1 2 pieces, minute colloid cyst, no abnormalities 6.3 Thyroid Thyroid 0002046 986 1430 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.983771 255302 0.969367 0.989097 0.803981 24154 1 76 0.00265477 141 0 6.99939e+07 0.0302951 295787 7.07655e+07 1.48179e+07 24182 3.47209e+07 0 0.165386 0.989097 0.795216 6.99939e+07 0.00647303 1.52183e+07 7.95202e+06 1.53827e+07 150 1.54976e+07 1.25809e+07 0.00455362 1.54564e+07 49.9335 0.00417982 0.994423 0 50.2685 GTEX-11EI6-0826-SM-5985V 2 C1 2 pieces, marded congestion 5.8 Lung Lung 0008952 991 1425 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.979844 215472 0.973365 0.985392 0.73229 23417 1 76 0.00307507 117 0 6.3754e+07 0.0262785 579211 6.46991e+07 1.22625e+07 23444 3.16033e+07 0 0.241075 0.985392 0.721593 6.3754e+07 0.00744971 1.40781e+07 8.59150e+06 1.41999e+07 131 1.43185e+07 8.8021e+06 0.00525007 1.42973e+07 49.9631 0.00895238 0.990941 0 50.2154 GTEX-11EI6-0826-SM-CYKV8 2 C1 2 pieces, marded congestion 5.8 Lung Lung 0008952 991 1425 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 RIP-Seq GTEX-11EI6-1526-SM-5P9GL 1 C1 6 pieces, squamous mucosa is ~10% thickness, beginning to slough, autolysis score is '2' in some areas 6 Esophagus Esophagus - Mucosa 0006920 1003 1422 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4914 03/27/2014 TruSeq.v1 RNASEQ 0.987588 298736 0.97456 0.987542 0.829534 23003 1 76 0.00327688 369 0 9.86053e+07 0.0252418 2.07083e+06 9.98493e+07 4.29666e+06 23024 4.89604e+07 0 0.145026 0.987542 0.819199 9.86053e+07 0.0042101 2.20897e+07 1.2949e+07 2.25462e+07 362 2.23374e+07 1.09481e+07 0.00374351 2.22941e+07 49.9515 0.0207396 0.987495 0 50.5114 GTEX-11EI6-2226-SM-5EGJM 2 C1 2 pieces, spermatogenesis is present, markedly autolyzed 6.1 Testis Testis 0000473 1015 1415 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.987012 407709 0.932038 0.990633 0.736177 33581 1 76 0.00200151 216 0 9.157e+07 0.0676239 969727 9.24359e+07 8.15094e+06 33646 4.55023e+07 0 0.195861 0.990633 0.729281 9.157e+07 0.00307068 1.90595e+07 1.27013e+07 1.92051e+07 226 1.9303e+07 1.51616e+07 0.00253414 1.92634e+07 49.9486 0.0104908 0.994254 0 50.1902 GTEX-11EI6-2426-SM-5PNVS 2 C1 6 pieces, mucosa is up to ~1mm thick, ~40-60% thickness but moderately-markedly autolyzed 5.8 Stomach Stomach 0000945 1018 1413 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.988719 165323 0.972143 0.990892 0.81694 22741 1 76 0.00212966 175 0 6.73823e+07 0.0276615 2.29946e+06 6.80017e+07 5.63914e+06 22754 3.35062e+07 0 0.155203 0.990892 0.809499 6.73823e+07 0.00355714 1.48175e+07 1.15929e+07 1.50391e+07 194 1.49485e+07 8.4337e+06 0.00284184 1.50496e+07 50.1686 0.0338147 0.993065 0 50.3711 GTEX-11EI6-2626-SM-5PNVT 1 C1 6 pieces, all muscularis, good specimens 6.4 Colon Colon - Sigmoid 0001159 1024 1408 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.990815 228273 0.969367 0.992823 0.803347 23113 1 76 0.00201635 191 0 8.04104e+07 0.0304055 787633 8.09917e+07 8.1235e+06 23138 4.00053e+07 0 0.16602 0.992823 0.797581 8.04104e+07 0.00308568 1.72123e+07 7.88384e+06 1.73321e+07 204 1.7255e+07 1.26939e+07 0.00254994 1.74474e+07 50.2773 0.00972486 0.994831 0 50.1733 GTEX-11EI6-2826-SM-5H11D 0 C1 6 pieces, minimal dermal fat, squamous epithelium is ~50-60 microns 7.8 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1028 1406 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.989343 284608 0.972196 0.99175 0.767734 25167 1 76 0.00224082 185 0 8.1125e+07 0.0275211 286469 8.17999e+07 1.08639e+07 25200 4.03639e+07 0 0.204461 0.99175 0.7614 8.1125e+07 0.00313021 1.77919e+07 8.78989e+06 1.79252e+07 185 1.79763e+07 1.37667e+07 0.00268443 1.79273e+07 49.9317 0.00350207 0.994157 0 50.1865 GTEX-11EI6-2926-SM-5985U 1 C1 4 pieces, no significant abnormalities 6.2 Brain Brain - Cerebellum 0002037 1045 1389 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.985074 278741 0.957109 0.990004 0.773876 23576 1 76 0.00296913 195 0 7.96137e+07 0.0426878 3.1732e+06 8.04175e+07 1.63604e+07 23591 3.95134e+07 0 0.183232 0.990004 0.766141 7.96137e+07 0.00686789 1.74117e+07 1.61001e+07 1.71944e+07 238 1.71221e+07 6.65134e+06 0.0049088 1.78194e+07 50.9978 0.0394591 0.994935 0 49.6861 GTEX-11EI6-3026-SM-5GZZO 1 C1 4 pieces, no significant abnormalities 6.4 Brain Brain - Cortex 0001870 1048 1387 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.991465 431911 0.964226 0.993667 0.8256 24154 1 76 0.00229351 370 0 9.66699e+07 0.0354971 5.62951e+06 9.7286e+07 1.2201e+07 24174 4.81298e+07 0 0.138626 0.993667 0.820372 9.66699e+07 0.00335033 2.10824e+07 2.7164e+07 2.11997e+07 343 2.10245e+07 9.60145e+06 0.00282075 2.14644e+07 50.5177 0.0578656 0.995869 0 50.1388 GTEX-11EI6-3126-SM-5H111 2 C1 1 piece, all adenohypophysis, 1x0.5mm nubbin of dura, delineated 6.6 Pituitary Pituitary 0000007 1048 1387 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.987473 391357 0.963175 0.990887 0.764038 26174 1 76 0.00223099 270 0 9.15841e+07 0.0366189 1.65165e+06 9.24264e+07 1.11945e+07 26225 4.55115e+07 0 0.199137 0.990887 0.757075 9.15841e+07 0.00372302 1.99868e+07 9.84063e+06 2.0112e+07 266 2.01631e+07 1.07736e+07 0.00297443 2.02338e+07 50.0875 0.0178699 0.994302 0 50.156 GTEX-11EM3-0001-SM-5Q5BD B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 1143 BP-40621 RNA isolation_Trizol Manual (Cell Pellet) 07/10/2013 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.990326 507003 0.962946 0.992862 0.798617 20197 1 76 0.00165773 140 0 6.27918e+07 0.036636 469453 6.32432e+07 4.3294e+06 20222 3.12415e+07 0 0.164329 0.992862 0.792917 6.27918e+07 0.00269206 1.3859e+07 1.27343e+07 1.3895e+07 133 1.39247e+07 1.43234e+07 0.00217358 1.39925e+07 50.1214 0.00742298 0.995399 0 50.0649 GTEX-11EM3-0004-SM-58Q9C B1 Blood Whole Blood 0013756 1143 BP-39281 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/23/2013 LCSET-4574 01/20/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-11EM3-0004-SM-5DWTY B1 Blood Whole Blood 0013756 1143 BP-39281 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/23/2013 GTEx_OM25_Dec_01 01/29/2014 Illumina OMNI SNP Array OMNI GTEX-11EM3-0004-SM-6WBUK B1 Blood Whole Blood 0013756 1143 BP-39281 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/23/2013 LCSET-6056 09/20/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-11EM3-0005-SM-5N9DK B1 8.9 Blood Whole Blood 0013756 1143 BP-39302 RNA isolation_PAXgene Blood RNA (Manual) 05/23/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.99133 605190 0.960772 0.992398 0.801219 18833 1 76 0.0028538 153 0 8.58966e+07 0.0388976 236567 8.65546e+07 4.45587e+06 18847 4.27988e+07 0 0.159553 0.992398 0.795127 8.58966e+07 0.0033883 1.88903e+07 5.23293e+07 1.90578e+07 173 1.90684e+07 1.82332e+07 0.00312076 1.8979e+07 49.8826 0.00273315 0.993465 0 50.2208 GTEX-11EM3-0126-SM-5985K 0 B1 2 pieces, small attachment of fibrofatty tissue 7.4 Thyroid Thyroid 0002046 102 566 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.984986 298474 0.97199 0.989787 0.782946 24334 1 76 0.00249622 208 0 8.82214e+07 0.0277333 396165 8.91317e+07 2.02552e+07 24371 4.38048e+07 0 0.189044 0.989787 0.77495 8.82214e+07 0.00605777 1.9387e+07 9.57455e+06 1.94372e+07 213 1.95331e+07 1.49987e+07 0.00426835 1.96819e+07 50.1896 0.00444472 0.994589 0 50.0646 GTEX-11EM3-0226-SM-5985Y 1 B1 6 pieces, hemorrhage in adventitia 7 Blood Vessel Artery - Aorta 0001496 104 564 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.984056 236482 0.974522 0.989885 0.844277 21462 1 76 0.00242809 142 0 6.87079e+07 0.0251236 356833 6.94099e+07 1.44901e+07 21474 3.40793e+07 0 0.130245 0.989885 0.835737 6.87079e+07 0.00722944 1.47907e+07 6.72818e+06 1.49113e+07 154 1.50001e+07 1.28829e+07 0.00481463 1.50726e+07 50.1205 0.00514095 0.995715 0 50.2031 GTEX-11EM3-0326-SM-5A5KJ 0 B1 2 pieces, includes 10-20% attached fat/ vessels 9.2 Adrenal Gland Adrenal Gland 0002369 107 561 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.992159 285899 0.977962 0.994409 0.836808 22339 1 76 0.00175215 201 0 8.77983e+07 0.0216664 1.39032e+06 8.82919e+07 1.02249e+07 22366 4.37186e+07 0 0.141154 0.994409 0.83213 8.77983e+07 0.00362692 1.95011e+07 1.27351e+07 1.94221e+07 255 1.94526e+07 1.49662e+07 0.00268741 1.9643e+07 50.2436 0.0157469 0.99666 0 49.8986 GTEX-11EM3-0426-SM-5N9BZ 1 B1 2 pieces, one piece is 10% fat/10% fibrous 8.3 Heart Heart - Atrial Appendage 0006631 110 558 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.993491 165120 0.981279 0.99442 0.84392 21570 1 76 0.00247245 198 0 7.3144e+07 0.0184833 1.76842e+06 7.35544e+07 3.61019e+06 21585 3.64573e+07 0 0.137359 0.99442 0.839212 7.3144e+07 0.00298639 1.60052e+07 1.29528e+07 1.60897e+07 209 1.59553e+07 1.14602e+07 0.00272918 1.62033e+07 50.3856 0.0240423 0.99535 0 50.1317 GTEX-11EM3-0526-SM-5H12N 1 B1 2 pieces, significant attachment of fat (up to 2mm) 7.1 Blood Vessel Artery - Coronary 0001621 138 530 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.990533 205914 0.975796 0.993303 0.84666 20957 1 76 0.00186261 152 0 6.75786e+07 0.0239248 465984 6.80343e+07 8.77827e+06 20972 3.36191e+07 0 0.129137 0.993303 0.840989 6.75786e+07 0.00313542 1.44521e+07 5.03749e+06 1.46103e+07 168 1.45608e+07 1.23625e+07 0.00249724 1.46862e+07 50.2142 0.00684925 0.996073 0 50.2722 GTEX-11EM3-0626-SM-5H12Z 0 B1 2 pieces, no abnormalities 8.5 Heart Heart - Left Ventricle 0006566 142 526 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.992991 210293 0.986785 0.995046 0.884127 19997 1 76 0.00171815 269 0 8.33261e+07 0.0129215 1.41619e+06 8.3741e+07 1.07943e+07 20005 4.15094e+07 0 0.102658 0.995046 0.879747 8.33261e+07 0.00262749 1.84403e+07 1.12618e+07 1.84538e+07 268 1.83568e+07 1.61257e+07 0.00217188 1.86959e+07 50.4576 0.0169116 0.9971 0 50.0184 GTEX-11EM3-0726-SM-5GZZM 0 B1 6 pieces, well trimmed 8.7 Esophagus Esophagus - Muscularis 0004648 148 520 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.991957 255700 0.980658 0.994281 0.852073 21827 1 76 0.00180778 275 0 8.38065e+07 0.0190669 704040 8.42886e+07 9.68225e+06 21845 4.17251e+07 0 0.128585 0.994281 0.8472 8.38065e+07 0.00288028 1.82456e+07 8.7431e+06 1.82834e+07 266 1.82679e+07 1.50393e+07 0.00234278 1.84452e+07 50.2414 0.00835274 0.996605 0 50.0516 GTEX-11EM3-0826-SM-5N9CC 1 B1 6 pieces, few submucosal glands (some marked) 9.6 Esophagus Esophagus - Mucosa 0006920 151 517 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.991675 178645 0.977519 0.992805 0.848113 22096 1 76 0.00270574 170 0 7.83195e+07 0.0221604 298220 7.88871e+07 4.12084e+06 22112 3.90339e+07 0 0.129406 0.992805 0.842011 7.83195e+07 0.00321683 1.75994e+07 1.09413e+07 1.77001e+07 190 1.76698e+07 1.67437e+07 0.00296099 1.77139e+07 50.0623 0.00378034 0.993935 0 50.1425 GTEX-11EM3-0926-SM-5A5KK 0 B1 6 pieces, well trimmed 8.7 Esophagus Esophagus - Gastroesophageal Junction 0004550 153 515 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.990463 242333 0.972486 0.993059 0.810585 22571 1 76 0.00186143 209 0 7.72323e+07 0.0271809 845299 7.7772e+07 9.66214e+06 22595 3.84383e+07 0 0.161901 0.993059 0.804959 7.72323e+07 0.00363864 1.66962e+07 8.43486e+06 1.6836e+07 226 1.68095e+07 1.24104e+07 0.00274771 1.69039e+07 50.1399 0.0108689 0.995656 0 50.2085 GTEX-11EM3-1026-SM-5A5KL 1 B1 6 pieces, mucosa and submucosa 7.4 Stomach Stomach 0000945 156 512 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.984296 195368 0.977815 0.987505 0.814319 22223 1 76 0.00201192 258 0 6.56669e+07 0.0218329 680306 6.64978e+07 8.09813e+06 22245 3.26588e+07 0 0.163496 0.987505 0.804144 6.56669e+07 0.00418422 1.50226e+07 6.89813e+07 1.51107e+07 184 1.51531e+07 1.57323e+07 0.00309454 1.51858e+07 50.054 0.0102305 0.990713 0 50.1461 GTEX-11EM3-1126-SM-5A5KM 0 B1 2 pieces, fat with few larger vessels 7.5 Adipose Tissue Adipose - Visceral (Omentum) 0010414 161 507 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.991225 228728 0.972994 0.99335 0.827903 23750 1 76 0.0018128 274 0 8.15683e+07 0.0267888 1.12534e+06 8.21143e+07 9.59782e+06 23773 4.06283e+07 0 0.145091 0.99335 0.822398 8.15683e+07 0.00357832 1.79833e+07 1.14084e+07 1.80541e+07 259 1.80212e+07 1.33364e+07 0.00269367 1.81755e+07 50.2131 0.0137045 0.995475 0 50.0982 GTEX-11EM3-1226-SM-5N9DD 0 B1 6 pieces, well trimmed with minimal internal fat 7.6 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 165 503 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.991473 181699 0.970364 0.992654 0.800086 23772 1 76 0.00264487 178 0 7.61477e+07 0.0294281 740457 7.67112e+07 3.76379e+06 23796 3.79232e+07 0 0.170278 0.992654 0.794208 7.61477e+07 0.00327115 1.67804e+07 8.22842e+06 1.68255e+07 183 1.67667e+07 1.285e+07 0.00295764 1.69298e+07 50.242 0.00965253 0.993835 0 50.0672 GTEX-11EM3-1326-SM-5N9C6 0 B1 2 pieces, predominantly fibrous stroma with many ducts/lobules 8 Breast Breast - Mammary Tissue 0008367 170 498 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.992988 163653 0.964508 0.993718 0.786834 25033 1 76 0.0027315 175 0 7.92294e+07 0.0348905 576772 7.97303e+07 4.01968e+06 25063 3.94697e+07 0 0.177674 0.993718 0.781891 7.92294e+07 0.00308121 1.73209e+07 8.54974e+06 1.74263e+07 184 1.73606e+07 1.45712e+07 0.00290623 1.74439e+07 50.1196 0.00723404 0.994448 0 50.1516 GTEX-11EM3-1526-SM-5A5KN 1 B1 6 pieces, mucosa and muscularis 8.4 Colon Colon - Transverse 0001157 191 477 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.988705 223733 0.97491 0.991495 0.817923 23347 1 76 0.00215327 218 0 7.56145e+07 0.0234821 757973 7.62631e+07 8.30489e+06 23376 3.75739e+07 0 0.156987 0.991495 0.810967 7.56145e+07 0.00382209 1.68493e+07 1.22013e+07 1.67969e+07 225 1.68321e+07 1.26554e+07 0.00298533 1.70053e+07 50.2558 0.00993892 0.994286 0 49.9222 GTEX-11EM3-1626-SM-5N9CO 1 B1 6 pieces, predominantly muscularis with small strip of mucosa, attachment of fat 8.6 Colon Colon - Sigmoid 0001159 189 479 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.993563 189238 0.977015 0.994379 0.842293 22152 1 76 0.00256829 210 0 8.19179e+07 0.0226998 552870 8.2381e+07 4.0722e+06 22171 4.08181e+07 0 0.134722 0.994379 0.837558 8.19179e+07 0.00299767 1.77137e+07 7.14645e+06 1.78282e+07 225 1.77382e+07 1.51483e+07 0.0027828 1.78695e+07 50.1844 0.00671113 0.995196 0 50.1611 GTEX-11EM3-1726-SM-5N9D1 0 B1 2 pieces 8.8 Ovary Ovary 0000992 194 474 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.992798 270718 0.967208 0.993632 0.786167 23389 1 76 0.00260119 150 0 7.27486e+07 0.0324725 229551 7.32148e+07 3.25089e+06 23418 3.62366e+07 0 0.181041 0.993632 0.781161 7.27486e+07 0.00305846 1.5993e+07 7.19691e+06 1.6052e+07 157 1.60202e+07 1.41646e+07 0.00282963 1.60875e+07 50.1048 0.00313531 0.994467 0 50.0921 GTEX-11EM3-1826-SM-5A5KO 0 B1 6 pieces 7.8 Vagina Vagina 0000996 201 467 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.990081 231291 0.968529 0.992726 0.787338 23495 1 76 0.0019335 176 0 7.50101e+07 0.0311782 366611 7.55598e+07 9.49337e+06 23516 3.73199e+07 0 0.181191 0.992726 0.78161 7.50101e+07 0.00365236 1.62788e+07 7.03115e+06 1.64508e+07 177 1.64635e+07 1.27244e+07 0.00279064 1.64502e+07 49.9797 0.00485193 0.99537 0 50.2626 GTEX-11EM3-1926-SM-5987U 0 B1 2 pieces, one piece is essentially all myometrium, second is 20% endometrium/80% myometrium 8.2 Uterus Uterus 0000995 203 465 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.987265 303694 0.973163 0.991667 0.819311 22736 1 76 0.00247422 147 0 6.73128e+07 0.0264725 247941 6.78784e+07 1.42361e+07 22761 3.34301e+07 0 0.153851 0.991667 0.812484 6.73128e+07 0.00584926 1.46205e+07 6.2589e+06 1.46754e+07 148 1.47579e+07 1.2482e+07 0.00415425 1.48121e+07 50.0917 0.00365272 0.996069 0 50.0937 GTEX-11EM3-2126-SM-5H11M 0 B1 2 pieces, one piece is fragmented, ~10-20% fat and portion of tendon 7.9 Muscle Muscle - Skeletal 0011907 233 435 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.991841 228651 0.985051 0.993856 0.878323 19974 1 76 0.00176744 276 0 8.56629e+07 0.0147393 956299 8.61925e+07 1.14602e+07 19984 4.26775e+07 0 0.106727 0.993856 0.872927 8.56629e+07 0.00262808 1.88929e+07 1.50925e+07 1.87166e+07 272 1.8675e+07 1.63522e+07 0.00219689 1.91008e+07 50.5636 0.0110949 0.995871 0 49.7657 GTEX-11EM3-2226-SM-5H11Y 1 B1 2 pieces, well trimmed 6.4 Blood Vessel Artery - Tibial 0007610 237 431 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.98865 299502 0.973973 0.9915 0.855599 20508 1 76 0.00190607 164 0 7.15822e+07 0.0256819 602949 7.21958e+07 9.42465e+06 20520 3.55913e+07 0 0.118374 0.9915 0.848326 7.15822e+07 0.00322279 1.51749e+07 5.86334e+06 1.52955e+07 185 1.52588e+07 1.307e+07 0.00256254 1.54104e+07 50.2471 0.00835158 0.99435 0 50.198 GTEX-11EM3-2326-SM-5H12B 1 B1 2 pieces, one is ~10% fibrous with few sweat glands 7.1 Adipose Tissue Adipose - Subcutaneous 0002190 238 430 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.990407 203045 0.977895 0.993221 0.825132 21918 1 76 0.00192522 167 0 7.34386e+07 0.021847 392313 7.39398e+07 9.07296e+06 21934 3.65468e+07 0 0.152763 0.993221 0.819538 7.34386e+07 0.00310288 1.61676e+07 7.89062e+06 1.62501e+07 194 1.62755e+07 1.23006e+07 0.00251238 1.63359e+07 50.0926 0.00530584 0.996034 0 50.1273 GTEX-11EM3-2426-SM-59861 1 B1 6 pieces, well trimmed with minimal internal adipose tissue, squamous epithelium measures 40-70 microns 7.9 Skin Skin - Sun Exposed (Lower leg) 0004264 240 428 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.987223 270972 0.97232 0.991159 0.812677 23212 1 76 0.00250553 178 0 6.599e+07 0.0274523 554129 6.65786e+07 1.31051e+07 23234 3.27963e+07 0 0.159643 0.991159 0.805492 6.599e+07 0.0058988 1.44502e+07 8.9001e+06 1.44783e+07 154 1.4517e+07 1.13738e+07 0.00419543 1.46561e+07 50.2384 0.00832292 0.995094 0 50.0485 GTEX-11EMC-0002-SM-5Q5DO B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 635 BP-40621 RNA isolation_Trizol Manual (Cell Pellet) 07/10/2013 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.988229 842102 0.961526 0.990858 0.809799 21528 1 76 0.00275933 214 0 9.83279e+07 0.033377 345182 9.92351e+07 1.54291e+07 21559 4.86959e+07 0 0.151728 0.990858 0.802395 9.83279e+07 0.00395771 2.17762e+07 2.69867e+07 2.18366e+07 238 2.19007e+07 2.2586e+07 0.00335693 2.19708e+07 50.0799 0.00347843 0.993487 0 50.0692 GTEX-11EMC-0004-SM-58Q8T B1 Blood Whole Blood 0013756 635 BP-39281 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/23/2013 LCSET-4574 01/20/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-11EMC-0004-SM-5DWTM B1 Blood Whole Blood 0013756 635 BP-39281 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/23/2013 GTEx_OM25_Dec_01 01/29/2014 Illumina OMNI SNP Array OMNI GTEX-11EMC-0004-SM-6WBUA B1 Blood Whole Blood 0013756 635 BP-39281 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/23/2013 LCSET-6056 09/21/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-11EMC-0006-SM-5O9DN B1 7 Blood Whole Blood 0013756 635 BP-39302 RNA isolation_PAXgene Blood RNA (Manual) 05/23/2013 LCSET-4910 04/01/2014 TruSeq.v1 RNASEQ 0.96542 679552 0.980434 0.967966 0.811893 18217 1 76 0.00402171 194 0 1.2536e+08 0.0185297 321802 1.29509e+08 5.50452e+06 18224 6.2326e+07 0 0.168541 0.967966 0.785885 1.2536e+08 0.00528838 2.92139e+07 2.00891e+08 2.99239e+07 219 2.99946e+07 3.45978e+07 0.00465338 2.94859e+07 49.5724 0.00248479 0.970513 0 50.6002 GTEX-11EMC-0008-SM-5Q5DR B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 809 BP-39935 RNA isolation_Trizol Manual (Cell Pellet) 06/14/2013 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.992961 426387 0.975392 0.994803 0.852316 20655 1 76 0.00179013 179 0 8.2156e+07 0.0242675 252459 8.25852e+07 1.09148e+07 20675 4.09284e+07 0 0.123075 0.994803 0.847887 8.2156e+07 0.00289242 1.83123e+07 1.46065e+07 1.84017e+07 185 1.84071e+07 2.11905e+07 0.00234026 1.84619e+07 50.0743 0.00305695 0.996644 0 50.1218 GTEX-11EMC-0011-R10a-SM-DNZZJ B1, A1 7.5 Brain Brain - Frontal Cortex (BA9) 0009834 640 BP-42276 RNA isolation_PAXgene Tissue miRNA 08/13/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.988461 578151 0.962044 0.992238 0.848554 23801 1 76 0.00220825 270 0 9.06059e+07 0.0376106 4.81737e+06 9.13146e+07 9.29367e+06 23821 4.50223e+07 0 0.11349 0.992238 0.841968 9.06059e+07 0.004038 1.96992e+07 1.62746e+07 2.00496e+07 313 2.00684e+07 1.01442e+07 0.00311964 1.99752e+07 49.8836 0.0527557 0.996016 0 50.4408 GTEX-11EMC-0011-R11b-SM-DNZZK B1, A1 6.3 Brain Brain - Cerebellar Hemisphere 0002037 640 BP-42276 RNA isolation_PAXgene Tissue miRNA 08/13/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.986049 610266 0.950605 0.990424 0.760415 23560 1 76 0.00252762 269 0 9.15374e+07 0.0490466 2.7891e+06 9.24225e+07 9.78352e+06 23595 4.54231e+07 0 0.19019 0.990424 0.753133 9.15374e+07 0.00462501 1.97048e+07 1.50408e+07 1.99714e+07 269 2.01107e+07 9.66892e+06 0.00357169 1.99096e+07 49.7488 0.0301777 0.994798 0 50.336 GTEX-11EMC-0011-R2b-SM-DO114 B1, A1 7.1 Brain Brain - Substantia nigra 0002038 640 BP-42439 RNA isolation_PAXgene Tissue miRNA 08/19/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.987002 319281 0.970808 0.991401 0.860297 21103 1 76 0.00211873 271 0 7.1586e+07 0.0290278 7.97916e+06 7.22069e+07 7.56202e+06 21114 3.55455e+07 0 0.110511 0.991401 0.8529 7.1586e+07 0.00432313 1.55059e+07 1.72868e+07 1.6391e+07 297 1.6149e+07 5.35925e+06 0.00321604 1.59947e+07 49.76 0.110504 0.9958 0 51.3874 GTEX-11EMC-0011-R8b-SM-DO91Z B1, A1 5.7 Brain Brain - Hypothalamus 0001898 640 BP-42276 RNA isolation_PAXgene Tissue miRNA 08/13/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.995826 272766 0.967304 0.996564 0.845124 21248 1 76 0.00157982 385 0 8.45888e+07 0.0325459 1.03499e+07 8.48805e+07 4.88357e+06 21263 4.21891e+07 0 0.12218 0.996564 0.84222 8.45888e+07 0.00212697 1.86011e+07 1.71494e+07 1.91588e+07 352 1.87841e+07 6.82883e+06 0.00185319 1.90173e+07 50.3084 0.121935 0.997301 0 50.7384 GTEX-11EMC-0011-R9b-SM-DO921 B1, A1 7.6 Brain Brain - Spinal cord (cervical c-1) 0006469 640 BP-42276 RNA isolation_PAXgene Tissue miRNA 08/13/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.995019 527505 0.957046 0.995684 0.814644 23456 1 76 0.00181039 407 0 1.01397e+08 0.0426174 5.08563e+06 1.01836e+08 5.85451e+06 23482 5.05604e+07 0 0.142401 0.995684 0.811128 1.01397e+08 0.00207511 2.23576e+07 1.46404e+07 2.28498e+07 339 2.25718e+07 1.29985e+07 0.00194266 2.26935e+07 50.1345 0.0499392 0.99635 0 50.5445 GTEX-11EMC-0126-SM-5EGKV 1 B1 2 pieces, fibrin deposition in alveolar septa 7.6 Lung Lung 0008952 670 730 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.986789 300180 0.977506 0.990825 0.811873 22783 1 76 0.00214945 167 0 7.83889e+07 0.0218845 403647 7.91148e+07 7.01031e+06 22808 3.89192e+07 0 0.165633 0.990825 0.804424 7.83889e+07 0.0033022 1.72756e+07 8.02376e+06 1.75191e+07 196 1.75797e+07 1.3713e+07 0.00272348 1.75166e+07 49.91 0.00510204 0.994861 0 50.3499 GTEX-11EMC-0226-SM-5EGLP 1 B1 2 pieces, no significant findings 6 Thyroid Thyroid 0002046 673 727 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.990818 270022 0.970838 0.993143 0.768484 24694 1 76 0.00193587 210 0 9.04846e+07 0.0288508 311030 9.11094e+07 7.26332e+06 24730 4.5003e+07 0 0.202354 0.993143 0.763215 9.04846e+07 0.00305616 1.97815e+07 9.29644e+06 1.99981e+07 226 2.00002e+07 1.47914e+07 0.0024947 1.99819e+07 49.9771 0.00341381 0.995467 0 50.2722 GTEX-11EMC-0526-SM-5EGJN 3 B1 2 pieces, ~50% adherent fat/stroma. All cortex, markedly autolyzed 5.7 Adrenal Gland Adrenal Gland 0002369 718 682 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.971357 339050 0.966099 0.975198 0.767838 23055 1 76 0.00227902 200 0 8.12529e+07 0.033682 3.16834e+06 8.33194e+07 7.80937e+06 23083 4.03199e+07 0 0.198261 0.975198 0.748794 8.12529e+07 0.00348651 1.74346e+07 1.50704e+07 1.75327e+07 245 1.752e+07 8.86171e+06 0.00288038 1.77351e+07 50.3051 0.0380264 0.979039 0 50.1403 GTEX-11EMC-0726-SM-5EGJO 1 B1 2 pieces, minimal fibrosis, focal microinfarct delineated 6.5 Heart Heart - Left Ventricle 0006566 710 690 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.987261 216664 0.980793 0.99003 0.817467 21320 1 76 0.0016287 267 0 8.62176e+07 0.0190838 4.90731e+06 8.70858e+07 7.50499e+06 21336 4.29039e+07 0 0.163326 0.99003 0.809317 8.62176e+07 0.0026689 1.9032e+07 3.61845e+07 1.8918e+07 303 1.8839e+07 9.07223e+06 0.00214734 1.9304e+07 50.6095 0.0563503 0.992799 0 49.8498 GTEX-11EMC-0826-SM-59862 1 B1 2 pieces, no abnormalities 6.5 Heart Heart - Atrial Appendage 0006631 713 687 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.981642 238833 0.976079 0.986924 0.811208 22640 1 76 0.00250038 195 0 7.98343e+07 0.0237284 2.58723e+06 8.08921e+07 1.94972e+07 22663 3.96274e+07 0 0.164871 0.986924 0.8006 7.98343e+07 0.0061148 1.74234e+07 1.45442e+07 1.71352e+07 239 1.72622e+07 1.01354e+07 0.00429792 1.76483e+07 50.553 0.0319837 0.992205 0 49.583 GTEX-11EMC-0926-SM-59863 1 B1 6 pieces, adherent fat serosa up to ~0.5mm, rep delineated 5.9 Blood Vessel Artery - Aorta 0001496 715 685 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.979144 292253 0.974383 0.98388 0.756315 23384 1 76 0.00285001 139 0 7.5893e+07 0.0251526 198701 7.71364e+07 1.58482e+07 23414 3.76413e+07 0 0.218068 0.98388 0.744123 7.5893e+07 0.00618532 1.64404e+07 8.44587e+06 1.65709e+07 153 1.66755e+07 1.28299e+07 0.00450964 1.66815e+07 50.0091 0.00257597 0.988616 0 50.1976 GTEX-11EMC-1426-SM-5N9E4 1 B1 6 pieces, all muscularis, good specimens 5.7 Colon Colon - Sigmoid 0001159 723 677 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.987486 336848 0.969475 0.989057 0.783192 24100 1 76 0.00399189 274 0 1.07036e+08 0.0303127 1.03232e+06 1.0822e+08 5.71697e+06 24138 5.31779e+07 0 0.186283 0.989057 0.774622 1.07036e+08 0.0041133 2.30483e+07 1.01419e+07 2.31714e+07 318 2.31023e+07 1.58312e+07 0.0040525 2.3281e+07 50.1926 0.00953913 0.990629 0 50.1331 GTEX-11EMC-1726-SM-5H11P 1 B1 2 pieces, typical post menopausal atrophy 7.6 Ovary Ovary 0000992 731 669 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.989054 282798 0.966502 0.99178 0.719543 22779 1 76 0.00213826 140 0 6.91775e+07 0.0332123 82030 6.97509e+07 8.90165e+06 22814 3.43899e+07 0 0.246959 0.99178 0.713628 6.91775e+07 0.00346342 1.5122e+07 1.05939e+07 1.52785e+07 143 1.53267e+07 1.23786e+07 0.00279902 1.52674e+07 49.9031 0.00117604 0.994505 0 50.2574 GTEX-11EMC-1826-SM-5A5JT 1 B1 6 pieces, mainly myometrium, atophic endometrium with cystic change present, ~1mm thick, rep delineated 6.6 Uterus Uterus 0000995 732 668 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.988719 211305 0.966468 0.991571 0.691193 23970 1 76 0.00229674 145 0 7.72226e+07 0.0332294 150904 7.78791e+07 9.78328e+06 24023 3.83865e+07 0 0.275275 0.991571 0.685367 7.72226e+07 0.0040591 1.68442e+07 8.70902e+06 1.70352e+07 153 1.70739e+07 1.18453e+07 0.00317539 1.7015e+07 49.9137 0.00193767 0.994422 0 50.2818 GTEX-11EMC-1926-SM-5A5JU 2 B1 6 pieces, quamous mucosa ~50 microns, beginning to slough 6.5 Vagina Vagina 0000996 735 665 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.990355 223432 0.972726 0.992614 0.746325 23150 1 76 0.00213858 141 0 7.09909e+07 0.0270622 280118 7.15191e+07 7.75778e+06 23180 3.53309e+07 0 0.226401 0.992614 0.740813 7.09909e+07 0.00400664 1.58082e+07 9.67599e+06 1.60162e+07 156 1.60204e+07 1.11931e+07 0.00307048 1.59584e+07 49.903 0.00391669 0.994873 0 50.3269 GTEX-11EMC-2026-SM-5A5JV 1 B1 2 pieces, fibrocystic change, prominent simple hyperplasia in one TDLU, encircled and delineated, one section 6.2 Breast Breast - Mammary Tissue 0008367 736 664 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.989291 256011 0.967915 0.992032 0.710149 25683 1 76 0.00224481 169 0 8.80181e+07 0.0317544 473640 8.87251e+07 1.12504e+07 25732 4.37704e+07 0 0.257766 0.992032 0.704491 8.80181e+07 0.00415671 1.93151e+07 9.8993e+06 1.95409e+07 199 1.95749e+07 1.25986e+07 0.00319812 1.95057e+07 49.9115 0.00533829 0.994773 0 50.2906 GTEX-11EMC-2226-SM-5A5JW 2 B1 3 pieces, squamous mucosa up to ~50-70% thickness, partially sloughing 8.3 Esophagus Esophagus - Mucosa 0006920 740 660 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.990154 325602 0.972828 0.992704 0.734309 22769 1 76 0.00219098 143 0 7.26085e+07 0.0269541 244011 7.31422e+07 8.20525e+06 22794 3.61233e+07 0 0.238519 0.992704 0.728951 7.26085e+07 0.00393536 1.62685e+07 1.21812e+07 1.65093e+07 154 1.65528e+07 1.19481e+07 0.00306093 1.64039e+07 49.7742 0.00333612 0.995253 0 50.3673 GTEX-11EMC-2526-SM-5PNVU 1 B1 2 pieces, glandular parenchyma is ~50% of each section, delineated; rest is skeletal muscae/squamous mucosa of lip 9.1 Salivary Gland Minor Salivary Gland 0006330 746 654 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.991994 191193 0.977139 0.993276 0.79711 22556 1 76 0.00217656 137 0 7.11215e+07 0.0225299 288458 7.16029e+07 6.55989e+06 22575 3.54435e+07 0 0.180029 0.993276 0.79175 7.11215e+07 0.00304406 1.61098e+07 1.1882e+07 1.61596e+07 159 1.61534e+07 1.34707e+07 0.00260975 1.62049e+07 50.0795 0.00402858 0.994558 0 50.0772 GTEX-11EMC-2626-SM-59864 0 B1 2 pieces, 10-15% interstitial fat, rep foci delineated 8.4 Muscle Muscle - Skeletal 0011907 805 595 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.986919 241278 0.98155 0.99049 0.847847 20220 1 76 0.00233908 135 0 7.40286e+07 0.0182414 618638 7.47394e+07 1.45318e+07 20237 3.6814e+07 0 0.133703 0.99049 0.839784 7.40286e+07 0.00556548 1.62592e+07 8.14058e+06 1.61206e+07 161 1.61971e+07 1.52772e+07 0.00394646 1.64239e+07 50.3475 0.00827727 0.99406 0 49.7859 GTEX-11EMC-2826-SM-5PNY6 0 B1 2 pieces, ~20% fascia/fibrous tissue, rep delineated 8.1 Adipose Tissue Adipose - Subcutaneous 0002190 808 592 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.991195 266389 0.97407 0.991835 0.796154 24107 1 76 0.00312922 278 0 1.03467e+08 0.0256187 339813 1.04319e+08 2.99658e+06 24136 5.15535e+07 0 0.177916 0.991835 0.789654 1.03467e+08 0.00351983 2.26107e+07 1.07508e+07 2.27553e+07 280 2.26819e+07 1.85267e+07 0.0033244 2.27447e+07 50.0692 0.00325745 0.992475 0 50.1594 GTEX-11EMC-2926-SM-5EQ4F 0 B1 6 pieces, focal adherent dermal fat 6.4 Skin Skin - Sun Exposed (Lower leg) 0004264 809 591 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.990444 253497 0.968622 0.992839 0.753131 24149 1 76 0.00207859 151 0 6.48146e+07 0.0311533 211848 6.52821e+07 7.58489e+06 24180 3.22418e+07 0 0.215492 0.992839 0.747737 6.48146e+07 0.00323245 1.41319e+07 7.18944e+06 1.4266e+07 147 1.42671e+07 1.03513e+07 0.00265413 1.42786e+07 50.0201 0.00324512 0.995233 0 50.2361 GTEX-11EMC-3026-SM-5EQ4R 0 B1 2 pieces, one section with adherent fibrous tissue up to ~0.5mm, delineated 5.7 Blood Vessel Artery - Tibial 0007610 810 590 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.989127 200778 0.97014 0.99167 0.749246 21944 1 76 0.00215091 129 0 6.70711e+07 0.0295611 597621 6.76344e+07 8.69292e+06 21976 3.33228e+07 0 0.220894 0.99167 0.743005 6.70711e+07 0.00323862 1.45365e+07 6.42292e+06 1.4626e+07 152 1.46088e+07 9.99841e+06 0.00269337 1.47162e+07 50.1832 0.00883605 0.994214 0 50.1534 GTEX-11EMC-3126-SM-5EGJP 1 B1 2 pieces, all adenohypophysis; 5mm nubbin adherent dura on one, delineated 6.4 Pituitary Pituitary 0000007 858 542 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.989283 231679 0.962202 0.991754 0.745654 25581 1 76 0.00201771 162 0 7.55001e+07 0.0375332 432849 7.61279e+07 6.77492e+06 25618 3.7552e+07 0 0.216548 0.991754 0.739505 7.55001e+07 0.00298709 1.61684e+07 9.32651e+06 1.63199e+07 177 1.63368e+07 1.10066e+07 0.00250119 1.63267e+07 49.9845 0.00568581 0.994224 0 50.2333 GTEX-11EMC-3226-SM-5EGKW 1 B1 2 pieces (fragmented), no abnormalities 6 Brain Brain - Cortex 0001870 864 536 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.987933 461204 0.959472 0.991867 0.821462 23573 1 76 0.00177346 265 0 7.76089e+07 0.0402333 4.52684e+06 7.82453e+07 6.79983e+06 23591 3.85637e+07 0 0.13801 0.991867 0.814781 7.76089e+07 0.00304493 1.68749e+07 2.54874e+07 1.69738e+07 292 1.69313e+07 7.77172e+06 0.00240667 1.71817e+07 50.367 0.0578545 0.995801 0 50.1462 GTEX-11EMC-3326-SM-5P9JH 1 B1 2 pieces, no abnormalities 6.9 Brain Brain - Cerebellum 0002037 866 534 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4916 03/27/2014 TruSeq.v1 RNASEQ 0.991154 845226 0.92784 0.991725 0.710424 24298 1 76 0.00338521 268 0 9.25198e+07 0.0718144 1.85675e+06 9.32918e+07 3.0322e+06 24330 4.60726e+07 0 0.217416 0.991725 0.704545 9.25198e+07 0.00367945 1.95757e+07 3.80813e+07 1.98347e+07 260 1.97518e+07 9.64324e+06 0.00353225 1.97182e+07 49.9575 0.0199026 0.992295 0 50.3286 GTEX-11EQ8-0001-SM-58Q82 C1 Blood Whole Blood 0013756 352 BP-39368 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/24/2013 LCSET-4574 01/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-11EQ8-0001-SM-5DWSU C1 Blood Whole Blood 0013756 352 BP-39368 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/24/2013 GTEx_OM25_Dec_01 01/29/2014 Illumina OMNI SNP Array OMNI GTEX-11EQ8-0001-SM-6WBTP C1 Blood Whole Blood 0013756 352 BP-39368 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/24/2013 LCSET-6056 09/22/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-11EQ8-0006-SM-5P9HJ C1 6.6 Blood Whole Blood 0013756 352 BP-39302 RNA isolation_PAXgene Blood RNA (Manual) 05/23/2013 LCSET-4916 03/27/2014 TruSeq.v1 RNASEQ 0.969971 613790 0.969943 0.970949 0.808133 18590 1 76 0.00363866 160 0 1.03075e+08 0.0284448 499050 1.06159e+08 3.74065e+06 18598 5.12439e+07 0 0.16181 0.970949 0.784656 1.03075e+08 0.00442219 2.38622e+07 1.38201e+08 2.42388e+07 178 2.41817e+07 2.53163e+07 0.00403003 2.40483e+07 49.8616 0.00470098 0.971928 0 50.3915 GTEX-11EQ8-0008-SM-5Q5DJ C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 461 BP-40621 RNA isolation_Trizol Manual (Cell Pellet) 07/10/2013 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.993027 240301 0.982062 0.994908 0.886435 19989 1 76 0.00179863 218 0 8.71494e+07 0.0175826 390235 8.75954e+07 1.12368e+07 20000 4.34183e+07 0 0.095627 0.994908 0.881922 8.71494e+07 0.00290113 1.96679e+07 1.11778e+07 1.9737e+07 232 1.97453e+07 2.37614e+07 0.00234883 1.9823e+07 50.0982 0.00445497 0.99679 0 50.0877 GTEX-11EQ8-0126-SM-5EQ54 1 C1 6 pieces, minimal attached and internal fat (<10%) 6.8 Skin Skin - Sun Exposed (Lower leg) 0004264 460 647 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4767 02/09/2014 TruSeq.v1 EXCLUDE 0.988202 297699 0.972237 0.991848 0.77904 22904 1 76 0.0020712 148 0 7.08825e+07 0.027447 313932 7.14651e+07 9.77943e+06 22928 3.52056e+07 0 0.193197 0.991848 0.772689 7.08825e+07 0.00330615 1.54443e+07 6.38844e+06 1.55884e+07 162 1.56285e+07 1.18417e+07 0.00268641 1.56486e+07 50.0321 0.0043928 0.995493 0 50.232 GTEX-11EQ8-0226-SM-5EQ5G 1 C1 2 pieces 6 Adipose Tissue Adipose - Subcutaneous 0002190 463 645 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.990001 323714 0.972352 0.992716 0.765214 23290 1 76 0.00204416 145 0 6.88903e+07 0.027402 423432 6.93957e+07 8.54064e+06 23317 3.42418e+07 0 0.207138 0.992716 0.75964 6.88903e+07 0.00309563 1.51204e+07 6.71051e+06 1.52571e+07 159 1.52476e+07 1.09247e+07 0.00256846 1.53096e+07 50.1015 0.0061017 0.995432 0 50.2251 GTEX-11EQ8-0426-SM-5N9DP 1 C1 2 pieces, well trimmed 6.1 Blood Vessel Artery - Tibial 0007610 468 641 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.991559 176298 0.972777 0.992539 0.81251 21597 1 76 0.00281692 169 0 7.70097e+07 0.0269092 397920 7.75886e+07 3.814e+06 21616 3.83382e+07 0 0.160266 0.992539 0.806448 7.70097e+07 0.00340583 1.67525e+07 6.88782e+06 1.68181e+07 187 1.67555e+07 1.30546e+07 0.00311108 1.68897e+07 50.1993 0.00512859 0.993519 0 50.0976 GTEX-11EQ8-0526-SM-5N9BC 1 C1 2 pieces, 5% internal fat, one piece has attachment of 10% additional fat and vessels 7.6 Muscle Muscle - Skeletal 0011907 471 639 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.993411 194742 0.979735 0.994294 0.862568 19722 1 76 0.00252128 209 0 8.55792e+07 0.020043 5.12091e+06 8.60702e+07 3.8225e+06 19728 4.26554e+07 0 0.117167 0.994294 0.857646 8.55792e+07 0.00307067 1.87005e+07 8.86426e+06 1.87595e+07 236 1.87177e+07 1.65153e+07 0.00279573 1.8814e+07 50.1284 0.0594969 0.995178 0 50.0787 GTEX-11EQ8-0826-SM-5N9FG 2 C1 2 pieces, fibrosis, nodularity with few collections of lymphocytes 5.7 Thyroid Thyroid 0002046 498 614 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.98792 276881 0.961306 0.989533 0.748906 24464 1 76 0.00405056 144 0 7.96328e+07 0.0383678 1.49416e+06 8.04752e+07 3.79556e+06 24495 3.95664e+07 0 0.2124 0.989533 0.741067 7.96328e+07 0.00421563 1.74002e+07 1.02802e+07 1.7437e+07 165 1.74334e+07 1.24555e+07 0.00413296 1.75312e+07 50.1399 0.0185667 0.991145 0 50.0528 GTEX-11EQ8-0926-SM-5H12V 1 C1 6 pieces, 5-10% attached and internal fat, overlying crust of degenerating cells 6.9 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 499 613 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.988489 226385 0.977437 0.991343 0.7803 22422 1 76 0.00209782 171 0 6.86085e+07 0.0223583 903059 6.92076e+07 8.96203e+06 22443 3.41081e+07 0 0.197137 0.991343 0.773545 6.86085e+07 0.00356536 1.5061e+07 7.49452e+06 1.51434e+07 171 1.51492e+07 1.01384e+07 0.00282948 1.52499e+07 50.1657 0.0130485 0.994198 0 50.1365 GTEX-11EQ8-1326-SM-5EGJQ 1 C1 2 pieces, interstitial fibrosis, one piece is up to ~40% fat/fibrosis 6.2 Heart Heart - Atrial Appendage 0006631 509 606 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.988265 239642 0.976849 0.992145 0.8185 22101 1 76 0.00186772 268 0 8.23857e+07 0.02295 4.85402e+06 8.30379e+07 7.68835e+06 22115 4.09294e+07 0 0.158348 0.992145 0.812071 8.23857e+07 0.00326163 1.82366e+07 1.85821e+07 1.83468e+07 281 1.83292e+07 1.02445e+07 0.00256195 1.85387e+07 50.2841 0.0584554 0.996024 0 50.1507 GTEX-11EQ8-1426-SM-5EGJR 1 C1 2 pieces, spermatogenesis 6 Testis Testis 0000473 511 604 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.98934 342324 0.930668 0.992087 0.741151 31760 1 76 0.00192839 149 0 7.37068e+07 0.0689965 1.02191e+06 7.42947e+07 6.33368e+06 31811 3.66589e+07 0 0.189517 0.992087 0.735286 7.37068e+07 0.00288474 1.51887e+07 9.94747e+06 1.52742e+07 157 1.53263e+07 1.19479e+07 0.00240524 1.53194e+07 49.9888 0.0137548 0.994834 0 50.1404 GTEX-11EQ8-2626-SM-5N9BO 2 C1 6 pieces, muscularis, small focus of autolyzed mucosa 5.7 Colon Colon - Sigmoid 0001159 539 583 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.988351 144860 0.970289 0.989026 0.816552 22199 1 76 0.00279487 162 0 7.44791e+07 0.0294552 1.20651e+06 7.53055e+07 3.64257e+06 22216 3.70618e+07 0 0.153737 0.989026 0.807591 7.44791e+07 0.0034133 1.64099e+07 1.1151e+07 1.64958e+07 175 1.64116e+07 1.32899e+07 0.00310387 1.65499e+07 50.2098 0.0160215 0.989701 0 50.1306 GTEX-11EQ8-2826-SM-5N9C1 1 C1 4 pieces, Purkinje cells with some evidence of ischemic change 6.4 Brain Brain - Cerebellum 0002037 557 567 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 EXCLUDE 0.990231 385248 0.932563 0.991192 0.690181 22905 1 76 0.00312575 152 0 7.41949e+07 0.0671431 1.24833e+06 7.48542e+07 3.73884e+06 22931 3.69179e+07 0 0.242382 0.991192 0.684102 7.41949e+07 0.00369641 1.58859e+07 2.0328e+07 1.60128e+07 167 1.59906e+07 7.49256e+06 0.0034108 1.59778e+07 49.9801 0.0166768 0.992154 0 50.1988 GTEX-11EQ9-0002-SM-5QGQ1 B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -165 BP-40621 RNA isolation_Trizol Manual (Cell Pellet) 07/10/2013 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.993334 258723 0.968217 0.994526 0.806334 19628 1 76 0.00195179 123 0 5.30442e+07 0.0312626 327881 5.33361e+07 3.73627e+06 19645 2.64283e+07 0 0.161884 0.994526 0.80192 5.30442e+07 0.00276759 1.17686e+07 7.57773e+06 1.1861e+07 114 1.18655e+07 1.19592e+07 0.0023592 1.1831e+07 49.9274 0.00614744 0.995717 0 50.1954 GTEX-11EQ9-0003-SM-58Q7V B1 Blood Whole Blood 0013756 -165 BP-39368 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/24/2013 LCSET-4574 01/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-11EQ9-0003-SM-5DWSP B1 Blood Whole Blood 0013756 -165 BP-39368 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/24/2013 GTEx_OM25_Dec_01 01/29/2014 Illumina OMNI SNP Array OMNI GTEX-11EQ9-0003-SM-6WBTK B1 Blood Whole Blood 0013756 -165 BP-39368 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/24/2013 LCSET-6056 09/20/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-11EQ9-0006-SM-5LUB6 B1 9.3 Blood Whole Blood 0013756 -165 BP-39302 RNA isolation_PAXgene Blood RNA (Manual) 05/23/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.973458 773983 0.967789 0.975148 0.8078 17461 1 76 0.00453875 89 0 7.73825e+07 0.0308614 185146 7.93546e+07 6.8647e+06 17468 3.84621e+07 0 0.159989 0.975148 0.787725 7.73825e+07 0.00385597 1.79078e+07 1.2165e+08 1.81198e+07 113 1.816e+07 2.06924e+07 0.00419795 1.80165e+07 49.8016 0.00233315 0.976838 0 50.2942 GTEX-11EQ9-0008-SM-5Q5DK B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 321 BP-40621 RNA isolation_Trizol Manual (Cell Pellet) 07/10/2013 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.991558 214604 0.978519 0.993613 0.893803 20290 1 76 0.00266048 286 0 1.01636e+08 0.02131 694765 1.02289e+08 1.51349e+07 20298 5.06293e+07 0 0.0847159 0.993613 0.888095 1.01636e+08 0.00358303 2.22765e+07 1.44473e+07 2.26412e+07 312 2.25055e+07 2.0262e+07 0.0031208 2.2623e+07 50.1302 0.00679219 0.995667 0 50.406 GTEX-11EQ9-0126-SM-5986I 1 B1 2 pieces, one ~50% fat,/cortex delineated; the other with well- defined central medulla (ensquared) and cortex, all well-preserved: valuable specimen 8.2 Adrenal Gland Adrenal Gland 0002369 71 628 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.986563 275003 0.979543 0.99111 0.837976 21833 1 76 0.0026674 198 0 7.61447e+07 0.0201405 1.74762e+06 7.68276e+07 1.79867e+07 21852 3.7821e+07 0 0.141567 0.99111 0.830527 7.61447e+07 0.00588213 1.69944e+07 1.48996e+07 1.6653e+07 215 1.66348e+07 1.10661e+07 0.00426739 1.72994e+07 50.9792 0.0227473 0.995658 0 49.4926 GTEX-11EQ9-0226-SM-5A5JX 1 B1 2 pieces, patchy congestion 8.3 Lung Lung 0008952 74 625 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.991271 300578 0.975837 0.993813 0.805172 23074 1 76 0.00204495 164 0 7.75523e+07 0.0238267 467599 7.80351e+07 8.3484e+06 23104 3.8592e+07 0 0.170666 0.993813 0.80019 7.75523e+07 0.00379499 1.71642e+07 7.27876e+06 1.73924e+07 185 1.74075e+07 1.40043e+07 0.00291773 1.73328e+07 49.8924 0.00599216 0.996356 0 50.3302 GTEX-11EQ9-0426-SM-5A5JY 1 B1 2 pieces, minimal congestion 8.1 Spleen Spleen 0002106 80 619 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.990189 276776 0.967462 0.992625 0.774926 23972 1 76 0.00229415 204 0 8.28488e+07 0.0318058 634966 8.34644e+07 1.00595e+07 24004 4.12182e+07 0 0.192536 0.992625 0.769211 8.28488e+07 0.00391308 1.82841e+07 1.22885e+07 1.84592e+07 218 1.84852e+07 1.33824e+07 0.00310163 1.84474e+07 49.9487 0.00760763 0.995061 0 50.2382 GTEX-11EQ9-0526-SM-5A5JZ 1 B1 2 pieces, diffuse macro and microvesucular steatosis, nodular regenerative changes 8.1 Liver Liver 0001114 82 617 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.992446 289746 0.980664 0.994586 0.850242 21355 1 76 0.00194535 199 0 9.33558e+07 0.0190148 747922 9.38639e+07 1.1229e+07 21376 4.64951e+07 0 0.130422 0.994586 0.845639 9.33558e+07 0.00354541 2.00949e+07 1.7047e+07 2.00786e+07 255 2.01036e+07 1.99366e+07 0.00274366 2.02555e+07 50.1882 0.00796815 0.996726 0 49.9797 GTEX-11EQ9-0626-SM-5A5K1 1 B1 2 pieces, focal lyphocytic thyroiditis, delineated, adherent fibrous/adipose tissue ~1mm 6.7 Thyroid Thyroid 0002046 84 615 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.990775 300528 0.969942 0.993302 0.753527 24782 1 76 0.00200393 273 0 1.03559e+08 0.0297751 426674 1.04257e+08 1.22007e+07 24827 5.15457e+07 0 0.216415 0.993302 0.74848 1.03559e+08 0.00386911 2.27157e+07 1.14513e+07 2.28226e+07 267 2.28723e+07 1.6117e+07 0.00293415 2.29048e+07 50.0355 0.00409252 0.995828 0 50.1174 GTEX-11EQ9-0726-SM-5A5K2 1 B1 6 pieces, squamous mucosa up to ~0.5mm thick, numberous mubmucosal mucous glands present, rep. delineated 9.4 Esophagus Esophagus - Mucosa 0006920 93 606 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.989946 215481 0.975981 0.992276 0.81618 22428 1 76 0.00209199 165 0 7.8419e+07 0.0235418 349710 7.90294e+07 8.71131e+06 22446 3.90389e+07 0 0.159801 0.992276 0.809876 7.8419e+07 0.00402726 1.75859e+07 1.21559e+07 1.77333e+07 185 1.77744e+07 1.60196e+07 0.00305735 1.77173e+07 49.9196 0.00442506 0.994607 0 50.2087 GTEX-11EQ9-0826-SM-5986Y 1 B1 6 pieces, all muscularis, good specimens 8.2 Esophagus Esophagus - Muscularis 0004648 96 603 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.988042 316808 0.974491 0.991747 0.839007 21619 1 76 0.0025166 164 0 7.38755e+07 0.0252003 527583 7.44903e+07 1.41671e+07 21636 3.67265e+07 0 0.135484 0.991747 0.832083 7.38755e+07 0.00593409 1.58846e+07 9.58855e+06 1.58178e+07 172 1.58551e+07 1.30444e+07 0.00421896 1.60967e+07 50.378 0.00708257 0.995452 0 49.8946 GTEX-11EQ9-0926-SM-5HL6I 1 B1 6 pieces, all muscularis, good specimens 8.3 Esophagus Esophagus - Gastroesophageal Junction 0004550 99 600 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.990465 227623 0.976748 0.99292 0.827603 21045 1 76 0.00198649 150 0 6.48964e+07 0.0229281 406784 6.53591e+07 7.00229e+06 21061 3.22902e+07 0 0.149144 0.99292 0.821744 6.48964e+07 0.0031106 1.39842e+07 6.38288e+06 1.4153e+07 157 1.41224e+07 1.13618e+07 0.00254716 1.41639e+07 50.0734 0.00622383 0.995375 0 50.2999 GTEX-11EQ9-1026-SM-5H134 1 B1 2 pieces, well-preserved, Islets well visualized; rep. delineated 7.3 Pancreas Pancreas 0001150 104 595 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.991739 323654 0.977293 0.993582 0.834216 21830 1 76 0.00227517 127 0 9.05614e+07 0.0222606 240411 9.11464e+07 1.08049e+07 21854 4.50862e+07 0 0.143077 0.993582 0.828862 9.05614e+07 0.00319887 2.06894e+07 2.21824e+07 2.09096e+07 150 2.08495e+07 2.49703e+07 0.00273616 2.09116e+07 50.0743 0.00263764 0.995425 0 50.2647 GTEX-11EQ9-1126-SM-5987I 1 B1 2 pieces, !0% fibrovascular tissue, delineated 7.8 Adipose Tissue Adipose - Visceral (Omentum) 0010414 105 594 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.984967 244458 0.975288 0.989607 0.867754 21893 1 76 0.00250058 207 0 7.78423e+07 0.0244708 518500 7.86598e+07 1.64649e+07 21905 3.86643e+07 0 0.107534 0.989607 0.858736 7.78423e+07 0.00605168 1.68993e+07 1.03927e+07 1.70236e+07 223 1.70566e+07 1.27812e+07 0.00426781 1.71985e+07 50.2071 0.00659167 0.994247 0 50.1831 GTEX-11EQ9-1226-SM-5987E 1 B1 6 pieces, mucosa is ~1mm thick, ~30% thickness 7.4 Stomach Stomach 0000945 108 591 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.982967 244987 0.977324 0.988673 0.827388 22297 1 76 0.00255456 169 0 7.20264e+07 0.0224406 485027 7.28516e+07 1.69519e+07 22315 3.57343e+07 0 0.149936 0.988673 0.818016 7.20264e+07 0.00642546 1.57448e+07 7.97851e+06 1.57913e+07 170 1.58837e+07 1.17095e+07 0.00447883 1.60318e+07 50.2319 0.00665774 0.994379 0 50.0739 GTEX-11EQ9-1326-SM-5985X 1 B1 6 pieces, well - preserved mucosa; rep lymphoid aggregates delineated 8.1 Small Intestine Small Intestine - Terminal Ileum 0001211 113 586 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.984005 249716 0.970867 0.988395 0.784802 23926 1 76 0.00304317 154 0 7.42221e+07 0.0282642 524029 7.50935e+07 1.54049e+07 23955 3.68402e+07 0 0.186064 0.988395 0.775695 7.42221e+07 0.00662227 1.6558e+07 1.06081e+07 1.63863e+07 159 1.6481e+07 1.19812e+07 0.00482477 1.67661e+07 50.4287 0.00697836 0.992786 0 49.7395 GTEX-11EQ9-1426-SM-5987G 1 B1 6 pieces, mucosa is 5-10% thickness, ~0.2-0.4mm thick 8 Colon Colon - Transverse 0001157 116 583 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.985419 266003 0.976183 0.990464 0.829539 22450 1 76 0.00254397 141 0 7.1957e+07 0.0235337 379473 7.26498e+07 1.51897e+07 22465 3.57242e+07 0 0.146644 0.990464 0.821628 7.1957e+07 0.00629591 1.57059e+07 7.32356e+06 1.57401e+07 164 1.58341e+07 1.25053e+07 0.00441039 1.59461e+07 50.1761 0.00522332 0.995509 0 50.0545 GTEX-11EQ9-1526-SM-5PNY7 1 B1 6 pieces, muscularis, adherent rim of serosa/fat up to ~1.5mm 6.3 Colon Colon - Sigmoid 0001159 124 575 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.990166 304522 0.974381 0.991066 0.823741 24481 1 76 0.0030352 382 0 1.18916e+08 0.0252863 864239 1.19987e+08 3.2997e+06 24511 5.92482e+07 0 0.15064 0.991066 0.816382 1.18916e+08 0.00349268 2.58664e+07 1.10732e+07 2.62053e+07 332 2.60311e+07 2.01322e+07 0.00326373 2.61413e+07 50.1056 0.00720275 0.991967 0 50.3254 GTEX-11EQ9-1626-SM-5PNY8 0 B1 6 pieces, minimal dermal fat 7.9 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 126 573 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.992382 194837 0.974555 0.992884 0.814436 24080 1 76 0.00305498 287 0 9.47357e+07 0.0251916 591221 9.54147e+07 2.71509e+06 24104 4.71944e+07 0 0.160118 0.992884 0.808641 9.47357e+07 0.00341683 2.09118e+07 1.06707e+07 2.11078e+07 264 2.10066e+07 1.70265e+07 0.00323581 2.10631e+07 50.0672 0.00619633 0.993386 0 50.2332 GTEX-11EQ9-1726-SM-5HL6U 1 B1 2 pieces, glandular hyperplastic pattern 7.6 Prostate Prostate 0002367 130 569 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.991462 248848 0.973891 0.993872 0.83819 22334 1 76 0.00194717 124 0 5.48093e+07 0.0258381 264075 5.51472e+07 5.89368e+06 22348 2.72678e+07 0 0.135701 0.993872 0.833053 5.48093e+07 0.0030773 1.18616e+07 4.97369e+06 1.19276e+07 135 1.18863e+07 1.01605e+07 0.00251086 1.20307e+07 50.3019 0.00478854 0.996282 0 50.1388 GTEX-11EQ9-1826-SM-5Q5AJ 1 B1 2 pieces, gynecomastoid stromal hyperplasia is one, encircled; with prominent ductal elements, delineated (rep) 6 Breast Breast - Mammary Tissue 0008367 131 568 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.986764 194210 0.973016 0.988584 0.823716 23152 1 76 0.00176137 205 0 7.85222e+07 0.026723 430153 7.94289e+07 5.74674e+06 23174 3.90954e+07 0 0.1493 0.988584 0.814312 7.85222e+07 0.00270918 1.71501e+07 8.94861e+06 1.72847e+07 208 1.72147e+07 1.39287e+07 0.0022344 1.73622e+07 50.2134 0.00541557 0.990404 0 50.1954 GTEX-11EQ9-1926-SM-5PNVV 0 B1 2 pieces, spermatogenesis is present 7.9 Testis Testis 0000473 134 565 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.991694 310842 0.933025 0.993396 0.750688 31555 1 76 0.00191915 152 0 7.66783e+07 0.0666175 530755 7.71881e+07 6.7713e+06 31603 3.82018e+07 0 0.182336 0.993396 0.745731 7.66783e+07 0.00281679 1.59673e+07 1.20705e+07 1.60101e+07 159 1.60466e+07 1.40308e+07 0.0023672 1.60485e+07 50.003 0.00687612 0.995098 0 50.067 GTEX-11EQ9-2026-SM-5P9JI 1 B1 2 pieces, 40% delineated glandular elements; rest is stroma/mucosa/muscle 8 Salivary Gland Minor Salivary Gland 0006330 141 558 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4916 03/27/2014 TruSeq.v1 RNASEQ 0.989883 272365 0.973221 0.990392 0.796651 24881 1 76 0.00349841 285 0 1.15804e+08 0.0250324 434724 1.16928e+08 3.76418e+06 24915 5.76132e+07 0 0.17657 0.990392 0.788997 1.15804e+08 0.00369805 2.60189e+07 2.30747e+07 2.62707e+07 312 2.62090e+07 1.89943e+07 0.00359818 2.61365e+07 49.9307 0.00371789 0.9909 0 50.2408 GTEX-11EQ9-2126-SM-5PNVW 1 B1 2 pieces, 5% interstitial fat, rep delineated 8.7 Muscle Muscle - Skeletal 0011907 318 381 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.993896 174074 0.984482 0.995073 0.883277 18734 1 76 0.00170913 172 0 7.01868e+07 0.0152729 540993 7.05343e+07 6.31186e+06 18739 3.49928e+07 0 0.101205 0.995073 0.878925 7.01868e+07 0.00259351 1.53855e+07 8.88066e+06 1.54707e+07 182 1.54119e+07 1.48685e+07 0.0021508 1.55168e+07 50.1696 0.00766993 0.99625 0 50.1382 GTEX-11EQ9-2226-SM-5987H 0 B1 2 pieces, nubbin adherent fat on one section, delineated, ~1.5mm 8.1 Blood Vessel Artery - Tibial 0007610 319 380 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.983245 253091 0.977286 0.988041 0.863338 20595 1 76 0.00248841 166 0 7.56448e+07 0.0222988 266348 7.65604e+07 1.69234e+07 20605 3.75511e+07 0 0.113948 0.988041 0.853014 7.56448e+07 0.00609877 1.6156e+07 7.27831e+06 1.62579e+07 168 1.63365e+07 1.5728e+07 0.00428482 1.64171e+07 50.1232 0.00347893 0.992838 0 50.1572 GTEX-11EQ9-2326-SM-5HL5H 0 B1 2 pieces, trace adherent fat, delineated, good specimens 7.2 Nerve Nerve - Tibial 0001323 320 379 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.989475 448195 0.952955 0.992054 0.749544 23271 1 76 0.00209407 171 0 7.01178e+07 0.0467406 252575 7.06794e+07 7.12635e+06 23301 3.48731e+07 0 0.20341 0.992054 0.743588 7.01178e+07 0.00321731 1.50979e+07 1.86156e+07 1.53418e+07 157 1.5333e+07 1.11959e+07 0.00265423 1.52807e+07 49.9145 0.00357353 0.994633 0 50.4006 GTEX-11EQ9-2426-SM-5HL5T 0 B1 6 pieces, minimal adherent fat 7.5 Skin Skin - Sun Exposed (Lower leg) 0004264 321 378 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.990953 210818 0.973307 0.993101 0.79695 21611 1 76 0.00208093 143 0 5.60133e+07 0.0264985 288245 5.64025e+07 6.13354e+06 21631 2.78669e+07 0 0.176357 0.993101 0.791452 5.60133e+07 0.00329681 1.22332e+07 6.07691e+06 1.23007e+07 140 1.22819e+07 9.1439e+06 0.00268756 1.23694e+07 50.1774 0.0051105 0.995249 0 50.1376 GTEX-11EQ9-2526-SM-5HL66 0 B1 2 pieces~10% fibrous tissue/fascia 6.9 Adipose Tissue Adipose - Subcutaneous 0002190 321 378 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.990979 234779 0.975536 0.993133 0.820009 22015 1 76 0.00204302 140 0 6.6415e+07 0.0241771 445308 6.68742e+07 6.9291e+06 22030 3.30585e+07 0 0.155526 0.993133 0.814379 6.6415e+07 0.00310172 1.45156e+07 7.04233e+06 1.46326e+07 164 1.45971e+07 1.09626e+07 0.00257122 1.469e+07 50.1587 0.00665889 0.995288 0 50.2006 GTEX-11GS4-0004-SM-58Q7W B1 Blood Whole Blood 0013756 675 BP-39412 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/28/2013 LCSET-4574 01/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-11GS4-0004-SM-5DWSQ B1 Blood Whole Blood 0013756 675 BP-39412 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/28/2013 GTEx_OM25_Dec_01 01/29/2014 Illumina OMNI SNP Array OMNI GTEX-11GS4-0004-SM-6WBTL B1 Blood Whole Blood 0013756 675 BP-39412 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/28/2013 LCSET-6056,LCSET-6242 10/06/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-11GS4-0006-SM-5SI9M B1 8.9 Blood Whole Blood 0013756 675 BP-39427 RNA isolation_PAXgene Blood RNA (Manual) 05/28/2013 LCSET-5174 04/04/2014 TruSeq.v1 RNASEQ 0.9801 737127 0.966407 0.983258 0.76259 20033 1 76 0.00212827 126 0 8.84255e+07 0.0329036 235687 8.99311e+07 9.71236e+06 20050 4.39466e+07 0 0.203817 0.983258 0.749823 8.84255e+07 0.00363036 2.01101e+07 9.62757e+07 2.03334e+07 152 2.0385e+07 2.00964e+07 0.0028769 2.03666e+07 49.9775 0.00262075 0.986417 0 50.276 GTEX-11GS4-0008-SM-5QGRA B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 915 BP-40621 RNA isolation_Trizol Manual (Cell Pellet) 07/10/2013 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.994128 281837 0.980108 0.995257 0.8711 19388 1 76 0.00161726 151 0 6.86961e+07 0.0195252 318745 6.90235e+07 4.78362e+06 19398 3.42426e+07 0 0.109008 0.995257 0.866968 6.86961e+07 0.00237818 1.54363e+07 8.11204e+06 1.5495e+07 150 1.54806e+07 1.76693e+07 0.00199729 1.55352e+07 50.0879 0.00461792 0.996385 0 50.0949 GTEX-11GS4-0011-R10a-SM-AHZ7I B1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 689 ChIP-Seq GTEX-11GS4-0011-R1a-SM-DO129 B1, A1 6.1 Brain Brain - Hippocampus 0001954 689 BP-42276 RNA isolation_PAXgene Tissue miRNA 08/13/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.987983 494262 0.962539 0.992192 0.844377 23307 1 76 0.0026886 266 0 8.22006e+07 0.0372549 6.44182e+06 8.28475e+07 7.98926e+06 23326 4.08358e+07 0 0.118163 0.992192 0.837784 8.22006e+07 0.00505942 1.77998e+07 1.88594e+07 1.81551e+07 306 1.81939e+07 6.29268e+06 0.00386898 1.80475e+07 49.7979 0.0777552 0.996402 0 50.4942 GTEX-11GS4-0011-R2a-SM-DO942 B1, A1 7.8 Brain Brain - Substantia nigra 0002038 689 BP-42276 RNA isolation_PAXgene Tissue miRNA 08/13/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.994404 410008 0.958364 0.994929 0.840858 23326 1 76 0.00217768 273 0 8.19496e+07 0.041453 8.37187e+06 8.23672e+07 5.02982e+06 23351 4.08432e+07 0 0.117506 0.994929 0.836594 8.19496e+07 0.00251348 1.79285e+07 1.15768e+07 1.83827e+07 322 1.81282e+07 8.79274e+06 0.00234549 1.82189e+07 50.1247 0.101641 0.995455 0 50.6254 GTEX-11GS4-0226-SM-5HL77 1 B1 6 pieces, well trimmed with minimal fat 7.4 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 785 659 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.990234 248205 0.970673 0.992274 0.737393 23390 1 76 0.0023387 152 0 6.79652e+07 0.0290974 268433 6.84944e+07 7.15033e+06 23419 3.3825e+07 0 0.23328 0.992274 0.731696 6.79652e+07 0.00339208 1.48437e+07 7.85666e+06 1.4967e+07 149 1.49669e+07 1.01713e+07 0.00286431 1.49749e+07 50.0134 0.00391905 0.994314 0 50.2068 GTEX-11GS4-0326-SM-5N9F7 1 B1 6 pieces 5.7 Blood Vessel Artery - Aorta 0001496 795 649 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.984091 298981 0.966967 0.985169 0.72645 24167 1 76 0.00440796 160 0 8.62556e+07 0.032649 396669 8.75541e+07 4.77303e+06 24202 4.27428e+07 0 0.240516 0.985169 0.715676 8.62556e+07 0.00460399 1.86819e+07 9.7513e+06 1.87237e+07 175 1.86833e+07 1.25364e+07 0.00450587 1.88204e+07 50.1829 0.00453056 0.986246 0 50.0559 GTEX-11GS4-0426-SM-5N9CD 1 B1 2 pieces, some interstitial fibrosis, one piece is 20% fat, second is 40% fat/fibrous 6.5 Heart Heart - Atrial Appendage 0006631 796 648 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.991481 146324 0.979374 0.992349 0.828739 21493 1 76 0.003157 151 0 6.56615e+07 0.0204701 2.36585e+06 6.61678e+07 2.87433e+06 21509 3.27175e+07 0 0.150635 0.992349 0.822399 6.56615e+07 0.00361446 1.42795e+07 1.51029e+07 1.43416e+07 179 1.42787e+07 7.09215e+06 0.00338553 1.43996e+07 50.2108 0.0357553 0.993216 0 50.1085 GTEX-11GS4-0526-SM-5A5KQ 1 B1 2 pieces 6.6 Heart Heart - Left Ventricle 0006566 798 646 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.986584 185868 0.985783 0.989221 0.827076 20696 1 76 0.00261461 266 0 7.78754e+07 0.0140932 3.41631e+06 7.87239e+07 9.05384e+06 20707 3.87615e+07 0 0.158707 0.989221 0.818161 7.78754e+07 0.00478885 1.72327e+07 3.40337e+07 1.68869e+07 264 1.68716e+07 6.96923e+06 0.00369884 1.74078e+07 50.7821 0.0433961 0.991857 0 49.4932 GTEX-11GS4-0626-SM-5A5LC 1 B1 2 pieces, atherosclerosis with narrowing of the lumen by 50%, attached portion of fat up to 3.2x1mm 6 Blood Vessel Artery - Coronary 0001621 803 641 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.988814 226683 0.96915 0.991389 0.787866 23444 1 76 0.00219092 142 0 7.15054e+07 0.0305277 282499 7.21265e+07 8.09533e+06 23468 3.55459e+07 0 0.181284 0.991389 0.781082 7.15054e+07 0.00436626 1.52307e+07 8.83433e+06 1.54317e+07 165 1.54004e+07 1.19364e+07 0.00327577 1.54412e+07 50.0661 0.00391672 0.993965 0 50.3278 GTEX-11GS4-0826-SM-5986J 2 B1 2 pieces, one piece is ~30% fat/fibrous tissue, few collections of lymphocytes 7 Thyroid Thyroid 0002046 807 637 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.983729 265935 0.967446 0.988898 0.738494 24471 1 76 0.0028749 134 0 7.25004e+07 0.0322106 177776 7.33143e+07 1.73845e+07 24508 3.59672e+07 0 0.228952 0.988898 0.730295 7.25004e+07 0.00639421 1.58488e+07 8.70007e+06 1.5921e+07 142 1.60614e+07 1.16029e+07 0.00462536 1.60602e+07 49.9981 0.00242485 0.994067 0 50.1137 GTEX-11GS4-1026-SM-5N9DE 1 B1 2 pieces 6 Adipose Tissue Adipose - Visceral (Omentum) 0010414 812 632 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.98841 194218 0.971638 0.989133 0.751136 23657 1 76 0.00314395 165 0 8.13552e+07 0.0280667 542669 8.2249e+07 3.96204e+06 23690 4.04658e+07 0 0.220503 0.989133 0.742973 8.13552e+07 0.00361853 1.78564e+07 1.04198e+07 1.79119e+07 197 1.78324e+07 1.0505e+07 0.00338107 1.79971e+07 50.2298 0.00659788 0.989857 0 50.0776 GTEX-11GS4-1426-SM-5N9D2 1 B1 6 pieces, well trimmed 5.8 Esophagus Esophagus - Muscularis 0004648 829 615 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.988077 192934 0.972822 0.989628 0.835103 22236 1 76 0.00330338 199 0 7.56107e+07 0.027023 2.75243e+06 7.64031e+07 4.02743e+06 22251 3.75937e+07 0 0.137719 0.989628 0.826441 7.56107e+07 0.00394062 1.65529e+07 1.00724e+07 1.67161e+07 222 1.65666e+07 7.74029e+06 0.0036215 1.68139e+07 50.3704 0.0360251 0.991179 0 50.2453 GTEX-11GS4-1826-SM-5HL4T 2 B1 6 pieces, predominantly muscularis with some residual autolyzed mucosa (marked) 6.6 Colon Colon - Sigmoid 0001159 840 604 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.990831 206889 0.970632 0.99288 0.817035 22824 1 76 0.00219486 162 0 7.16353e+07 0.0291121 536436 7.2149e+07 7.88535e+06 22850 3.56525e+07 0 0.153597 0.99288 0.811218 7.16353e+07 0.00323591 1.52868e+07 6.68186e+06 1.54743e+07 178 1.54286e+07 1.13099e+07 0.00271431 1.54721e+07 50.0704 0.00743511 0.99493 0 50.3049 GTEX-11GS4-2026-SM-5N9CP 1 B1 2 pieces, active spermatogenesis 7.2 Testis Testis 0000473 846 598 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.990866 205643 0.924799 0.991987 0.710052 32240 1 76 0.00288224 135 0 6.69554e+07 0.0748891 381363 6.74963e+07 3.02732e+06 32298 3.33511e+07 0 0.214747 0.991987 0.704362 6.69554e+07 0.00341805 1.38394e+07 8.66837e+06 1.38619e+07 128 1.38738e+07 1.10306e+07 0.00314984 1.38955e+07 50.0391 0.00565013 0.993108 0 50.0407 GTEX-11GS4-2126-SM-5A5KR 1 B1 2 pieces, gynecomastoid change, pacinian corpuscles, 30% fat 6.4 Breast Breast - Mammary Tissue 0008367 848 596 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.989835 184936 0.968408 0.992069 0.71482 25542 1 76 0.00231415 145 0 7.63494e+07 0.0312515 241410 7.69598e+07 9.14972e+06 25593 3.7999e+07 0 0.253588 0.992069 0.70915 7.63494e+07 0.00404081 1.67539e+07 8.13364e+06 1.68948e+07 163 1.69303e+07 1.11615e+07 0.00317554 1.68763e+07 49.9202 0.00313683 0.994302 0 50.2095 GTEX-11GS4-2326-SM-5A5KS 2 B1 6 pieces, glomeruli in all sections, arteriosclerosis 6.1 Kidney Kidney - Cortex 0001225 910 534 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.987577 360100 0.975553 0.990966 0.816263 24752 1 76 0.00256122 370 0 1.14815e+08 0.0242399 5.35177e+06 1.15861e+08 1.48438e+07 24780 5.70969e+07 0 0.159291 0.990966 0.808888 1.14815e+08 0.00450856 2.52692e+07 2.77066e+07 2.55517e+07 343 2.5525e+07 1.1899e+07 0.00353156 2.56428e+07 50.1151 0.0461911 0.994354 0 50.2779 GTEX-11GS4-2526-SM-5A5KT 1 B1 2 pieces, one piece includes ~10% internal fat 8.5 Muscle Muscle - Skeletal 0011907 913 531 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.990357 206165 0.98529 0.99333 0.875609 19111 1 76 0.00205443 151 0 7.36781e+07 0.014539 942574 7.41728e+07 8.94107e+06 19118 3.66695e+07 0 0.109681 0.99333 0.869769 7.36781e+07 0.00392238 1.61326e+07 1.29902e+07 1.61788e+07 202 1.61268e+07 1.37968e+07 0.00298561 1.6369e+07 50.3727 0.0127078 0.996304 0 50.0715 GTEX-11GS4-2526-SM-CYKV3 1 B1 2 pieces, one piece includes ~10% internal fat 8.5 Muscle Muscle - Skeletal 0011907 913 531 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 RIP-Seq GTEX-11GS4-2626-SM-5A5LD 1 B1 2 pieces, includes small portion of nerve, detached fragment of skeletal muscle abuts one piece of fat 7 Adipose Tissue Adipose - Subcutaneous 0002190 913 531 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.98966 269885 0.971819 0.992777 0.784692 23567 1 76 0.00219191 159 0 7.36339e+07 0.0278633 401343 7.41696e+07 8.47214e+06 23605 3.66148e+07 0 0.187128 0.992777 0.779024 7.36339e+07 0.0042925 1.60772e+07 8.44691e+06 1.62129e+07 172 1.6245e+07 1.15711e+07 0.00323891 1.62626e+07 50.0271 0.00541115 0.995894 0 50.21 GTEX-11GS4-2726-SM-5A5LE 0 B1 6 pieces, relatively well trimmed and with minimal internal fat, squamous epithelium measures 38-43 microns 7.7 Skin Skin - Sun Exposed (Lower leg) 0004264 915 529 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.990327 302265 0.97363 0.993146 0.81708 23850 1 76 0.00215559 191 0 7.75986e+07 0.0261065 455348 7.81341e+07 8.37887e+06 23876 3.85982e+07 0 0.15655 0.993146 0.81148 7.75986e+07 0.00426134 1.69497e+07 9.01946e+06 1.70594e+07 189 1.70651e+07 1.3509e+07 0.00320548 1.71501e+07 50.1243 0.00582777 0.995965 0 50.1613 GTEX-11GS4-2826-SM-5HL56 1 B1 3 pieces, each includes about 50% internal and attached fat 7.3 Nerve Nerve - Tibial 0001323 917 527 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.989596 272756 0.968528 0.992358 0.758233 23813 1 76 0.00218792 131 0 6.5423e+07 0.0312185 170330 6.59268e+07 6.99613e+06 23848 3.25227e+07 0 0.210295 0.992358 0.752438 6.5423e+07 0.00348211 1.45496e+07 9.90065e+06 1.46674e+07 130 1.46703e+07 1.26246e+07 0.00283321 1.47223e+07 50.0884 0.00258362 0.995118 0 50.2017 GTEX-11GS4-2926-SM-5A5LF 1 B1 3 pieces, atherosclerosis with narrowing of the lumen by ~50%, medial calcification 7.6 Blood Vessel Artery - Tibial 0007610 919 525 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.989376 233352 0.972343 0.992165 0.810312 22990 1 76 0.0021755 208 0 8.27071e+07 0.0272855 263103 8.33602e+07 1.10439e+07 23012 4.11378e+07 0 0.162031 0.992165 0.803964 8.27071e+07 0.0039553 1.77228e+07 8.07513e+06 1.79248e+07 213 1.79467e+07 1.54217e+07 0.0030629 1.79152e+07 49.9561 0.00315622 0.994954 0 50.2834 GTEX-11GS4-3026-SM-5A5LG 1 B1 2 pieces, adenohypophysis and neurohypophysis with small portion of pars intermedia 7.1 Pituitary Pituitary 0000007 954 490 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.991273 266970 0.961456 0.993363 0.770862 24674 1 76 0.00219497 130 0 6.7629e+07 0.0382929 289061 6.80809e+07 8.00988e+06 24707 3.36697e+07 0 0.190595 0.993363 0.765745 6.7629e+07 0.00395608 1.29362e+07 9.1553e+06 1.30617e+07 150 1.30866e+07 1.1188e+07 0.00307367 1.30374e+07 49.9058 0.00424585 0.995453 0 50.2414 GTEX-11GS4-3126-SM-5A5LH 1 B1 2 pieces, no abnormalities 6.2 Brain Brain - Cortex 0001870 959 485 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.990544 193596 0.96846 0.99283 0.828011 23109 1 76 0.00229743 198 0 6.91737e+07 0.0312655 2.78179e+06 6.96733e+07 8.15524e+06 23122 3.4442e+07 0 0.140449 0.99283 0.822074 6.91737e+07 0.0041662 1.52632e+07 1.07575e+07 1.53085e+07 222 1.52291e+07 7.51656e+06 0.00322966 1.5484e+07 50.415 0.0399262 0.995115 0 50.0742 GTEX-11GSO-0003-SM-58Q84 B1 Blood Whole Blood 0013756 779 BP-39412 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/28/2013 LCSET-4574 01/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-11GSO-0003-SM-5DWSW B1 Blood Whole Blood 0013756 779 BP-39412 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/28/2013 GTEx_OM25_Dec_01 01/28/2014 Illumina OMNI SNP Array OMNI GTEX-11GSO-0003-SM-6WBTR B1 Blood Whole Blood 0013756 779 BP-39412 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/28/2013 LCSET-6056 09/22/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-11GSO-0005-SM-5O9CA B1 7.2 Blood Whole Blood 0013756 779 BP-39427 RNA isolation_PAXgene Blood RNA (Manual) 05/28/2013 LCSET-4910 04/01/2014 TruSeq.v1 RNASEQ 0.968099 545883 0.980828 0.971004 0.812295 19099 1 76 0.00407836 156 0 1.18879e+08 0.0182169 590040 1.22429e+08 5.5945e+06 19104 5.90262e+07 0 0.168533 0.971004 0.788742 1.18879e+08 0.00558293 2.73354e+07 1.52596e+08 2.80582e+07 182 2.80621e+07 3.06392e+07 0.00482839 2.77049e+07 49.6797 0.00481945 0.973909 0 50.6523 GTEX-11GSO-0011-R10a-SM-AHZ7H B1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 829 ChIP-Seq GTEX-11GSO-0011-R1b-SM-57WD3 B1, A1 7.3 Brain Brain - Hippocampus 0001954 829 BP-42768 RNA isolation_PAXgene Tissue miRNA 08/27/2013 LCSET-4415 12/21/2013 TruSeq.v1 RNASEQ 0.987643 604658 0.961807 0.991835 0.822878 23563 1 76 0.00182538 269 0 8.18267e+07 0.0379222 6.86257e+06 8.25003e+07 1.073e+07 23587 4.0648e+07 0 0.138928 0.991835 0.81616 8.18267e+07 0.00434936 1.79525e+07 2.22288e+07 1.80439e+07 312 1.79295e+07 7.93805e+06 0.00308204 1.83638e+07 50.5983 0.0831824 0.996027 0 50.127 GTEX-11GSO-0011-R2a-SM-57WDF B1, A1 6.6 Brain Brain - Substantia nigra 0002038 829 BP-42768 RNA isolation_PAXgene Tissue miRNA 08/27/2013 LCSET-4415 12/21/2013 TruSeq.v1 RNASEQ 0.990658 643824 0.962148 0.993271 0.831833 23065 1 76 0.00175858 372 0 8.25946e+07 0.0376251 7.35002e+06 8.31541e+07 1.00288e+07 23081 4.10955e+07 0 0.130315 0.993271 0.826236 8.25946e+07 0.00347582 1.81043e+07 2.66924e+07 1.81934e+07 337 1.79263e+07 7.39139e+06 0.00261494 1.85633e+07 50.8728 0.0883903 0.995883 0 50.1228 GTEX-11GSO-0011-R3b-SM-57WB2 B1, A1 7.3 Brain Brain - Anterior cingulate cortex (BA24) 0009835 829 BP-42768 RNA isolation_PAXgene Tissue miRNA 08/27/2013 LCSET-4415 12/21/2013 TruSeq.v1 RNASEQ 0.992555 692510 0.957305 0.994576 0.843903 23154 1 76 0.00177835 269 0 7.64378e+07 0.0422836 3.53733e+06 7.68547e+07 8.58649e+06 23165 3.80558e+07 0 0.113402 0.994576 0.839326 7.64378e+07 0.00332819 1.67107e+07 1.86067e+07 1.67117e+07 276 1.66805e+07 9.37056e+06 0.0025517 1.68861e+07 50.3063 0.0460262 0.996597 0 50.0014 GTEX-11GSO-0226-SM-5A5LV 1 B1 2 pieces, few large vessels 6.7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 809 740 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.987608 289269 0.973229 0.991164 0.801422 22910 1 76 0.00208242 137 0 6.41762e+07 0.0264607 261088 6.47484e+07 8.0583e+06 22931 3.18918e+07 0 0.171807 0.991164 0.794341 6.41762e+07 0.00449217 1.40004e+07 8.82537e+06 1.41763e+07 152 1.42107e+07 1.08441e+07 0.00328297 1.4186e+07 49.9565 0.00403235 0.99472 0 50.3122 GTEX-11GSO-0626-SM-5A5LW 2 B1 2 pieces, multinodular hyperplasia 7.2 Thyroid Thyroid 0002046 823 726 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.989122 296913 0.962148 0.991688 0.813626 22084 1 76 0.00193493 141 0 6.42327e+07 0.0374954 138239 6.47710e+07 7.52059e+06 22110 3.1956e+07 0 0.148522 0.991688 0.806864 6.42327e+07 0.00366415 1.3922e+07 9.99058e+06 1.41449e+07 146 1.41735e+07 1.2521e+07 0.0027973 1.40506e+07 49.7822 0.00213427 0.994254 0 50.3971 GTEX-11GSO-1926-SM-5A5K3 1 B1 2 pieces, entirely fat 5.8 Breast Breast - Mammary Tissue 0008367 855 694 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.987767 240422 0.972577 0.990675 0.78465 25156 1 76 0.00213586 162 0 7.14307e+07 0.0271201 510604 7.21031e+07 8.86229e+06 25185 3.55209e+07 0 0.187927 0.990675 0.777333 7.14307e+07 0.00419814 1.56682e+07 9.56954e+06 1.583e+07 176 1.58344e+07 1.06141e+07 0.00316397 1.58592e+07 50.0391 0.00708158 0.993582 0 50.2569 GTEX-11GSO-2326-SM-5A5LX 1 B1 2 pieces 7.9 Adipose Tissue Adipose - Subcutaneous 0002190 968 581 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.98963 257586 0.971437 0.992458 0.770531 23065 1 76 0.00212257 139 0 6.64351e+07 0.0282783 239091 6.694e+07 7.87526e+06 23094 3.30453e+07 0 0.200906 0.992458 0.76472 6.64351e+07 0.00409252 1.45297e+07 7.95257e+06 1.46741e+07 148 1.47066e+07 1.11876e+07 0.00310474 1.46714e+07 49.9402 0.00357172 0.995286 0 50.2471 GTEX-11GSO-2426-SM-5A5LY 1 B1 6 pieces, relatively well trimmed with <10% attached/internal fat, squamous epithelium measures 26 to 30 microns 6.8 Skin Skin - Sun Exposed (Lower leg) 0004264 969 580 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.989134 240269 0.966796 0.991879 0.729958 23452 1 76 0.00217091 153 0 6.75959e+07 0.0330016 250447 6.81494e+07 8.42786e+06 23485 3.36206e+07 0 0.236838 0.991879 0.72403 6.75959e+07 0.0040698 1.4732e+07 8.66946e+06 1.48814e+07 148 1.49099e+07 1.00922e+07 0.00311773 1.48786e+07 49.9474 0.00367497 0.994623 0 50.2524 GTEX-11GSO-2526-SM-5PNVX 1 B1 2 pieces, 10% internal fat, small portion of attached tendon 8.6 Muscle Muscle - Skeletal 0011907 971 578 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.994161 192313 0.980575 0.995541 0.865517 18490 1 76 0.00166229 127 0 5.90858e+07 0.0191843 712630 5.93504e+07 5.24035e+06 18495 2.94486e+07 0 0.115058 0.995541 0.861658 5.90858e+07 0.00259341 1.28664e+07 7.28101e+06 1.28582e+07 144 1.28292e+07 1.18744e+07 0.00212721 1.29718e+07 50.2762 0.0120072 0.996922 0 49.9842 GTEX-11GSO-2526-SM-CYKO1 1 B1 2 pieces, 10% internal fat, small portion of attached tendon 8.6 Muscle Muscle - Skeletal 0011907 971 578 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 RIP-Seq GTEX-11GSO-2626-SM-5Q5AK 1 B1 2 pieces, 50-60% is internal and attached fat 6.9 Nerve Nerve - Tibial 0001323 972 577 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.990714 136122 0.964998 0.992491 0.734125 23262 1 76 0.00196565 135 0 5.96372e+07 0.0347054 149384 6.00884e+07 4.42708e+06 23290 2.96756e+07 0 0.230874 0.992491 0.728612 5.96372e+07 0.00289697 1.30893e+07 5.45897e+06 1.31729e+07 132 1.31541e+07 9.35644e+06 0.00243048 1.32111e+07 50.1081 0.00248607 0.994268 0 50.1591 GTEX-11GSO-2826-SM-5HL6Q 1 B1 2 pieces, adenophypophysis and neurohypophysis 6 Pituitary Pituitary 0000007 1036 513 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.990018 216720 0.963758 0.992194 0.753936 24479 1 76 0.00220541 120 0 5.65404e+07 0.0358751 478107 5.69852e+07 6.18454e+06 24505 2.81216e+07 0 0.209822 0.992194 0.74805 5.65404e+07 0.00318517 1.22714e+07 6.25152e+06 1.23266e+07 137 1.23106e+07 7.71892e+06 0.00269422 1.24068e+07 50.1946 0.00839001 0.994369 0 50.1122 GTEX-11GSO-2926-SM-5HL73 1 B1 2 pieces, no abnormalities 6.8 Brain Brain - Cortex 0001870 1037 512 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.991016 311435 0.96189 0.993522 0.821453 22994 1 76 0.00199775 153 0 6.10967e+07 0.0377495 2.36278e+06 6.14951e+07 6.98716e+06 23006 3.04039e+07 0 0.140437 0.993522 0.816132 6.10967e+07 0.00288622 1.33208e+07 1.35801e+07 1.34533e+07 174 1.34216e+07 7.41143e+06 0.00244087 1.34956e+07 50.1375 0.0384222 0.996027 0 50.2476 GTEX-11GSO-2926-SM-CYKQT 1 B1 2 pieces, no abnormalities 6.8 Brain Brain - Cortex 0001870 1037 512 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 RIP-Seq GTEX-11GSO-3026-SM-5Q5AL 1 B1 2 pieces, no abnormalities 7.1 Brain Brain - Cerebellum 0002037 1040 509 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.988081 301575 0.951586 0.991404 0.750844 23681 1 76 0.00193739 202 0 7.96641e+07 0.0480471 1.34746e+06 8.03549e+07 6.36946e+06 23707 3.95811e+07 0 0.200742 0.991404 0.74439 7.96641e+07 0.00317494 1.7239e+07 1.12045e+07 1.74233e+07 212 1.74426e+07 9.78848e+06 0.00255409 1.74641e+07 50.0308 0.0167688 0.994728 0 50.2658 GTEX-11GSP-0004-SM-58Q83 B1 Blood Whole Blood 0013756 705 BP-39412 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/28/2013 LCSET-4574 01/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-11GSP-0004-SM-5DWSV B1 Blood Whole Blood 0013756 705 BP-39412 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/28/2013 GTEx_OM25_Dec_01 01/28/2014 Illumina OMNI SNP Array OMNI GTEX-11GSP-0004-SM-6WBTQ B1 Blood Whole Blood 0013756 705 BP-39412 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/28/2013 LCSET-6056 09/22/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-11GSP-0006-SM-5N9EL B1 8.8 Blood Whole Blood 0013756 705 BP-39427 RNA isolation_PAXgene Blood RNA (Manual) 05/28/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.968893 478859 0.982668 0.970507 0.800583 19342 1 76 0.00436491 150 0 1.08491e+08 0.0166774 273383 1.11788e+08 5.68429e+06 19352 5.39468e+07 0 0.182085 0.970507 0.776972 1.08491e+08 0.00436862 2.52511e+07 1.3596e+08 2.57395e+07 196 2.57377e+07 2.82623e+07 0.00436676 2.5435e+07 49.7043 0.00244555 0.972121 0 50.479 GTEX-11GSP-0008-SM-5Q5DM B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 920 BP-40621 RNA isolation_Trizol Manual (Cell Pellet) 07/10/2013 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.993072 523477 0.975757 0.995043 0.865027 20367 1 76 0.00178701 227 0 8.5948e+07 0.0238552 284686 8.63762e+07 1.19966e+07 20382 4.28093e+07 0 0.11073 0.995043 0.860738 8.5948e+07 0.00305089 1.93119e+07 1.60373e+07 1.9385e+07 204 1.94049e+07 2.30564e+07 0.0024177 1.94655e+07 50.0779 0.00329588 0.997013 0 50.0945 GTEX-11GSP-0011-R10a-SM-5NQ7J B1, A1 6.6 Brain Brain - Frontal Cortex (BA9) 0009834 711 BP-42719 RNA isolation_PAXgene Tissue miRNA 08/26/2013 LCSET-4906 03/22/2014 TruSeq.v1 RNASEQ 0.99294 319857 0.966254 0.994312 0.831085 23068 1 76 0.00210049 266 0 7.81243e+07 0.0334816 7.63803e+06 7.85712e+07 5.79778e+06 23085 3.8924e+07 0 0.135169 0.994312 0.826358 7.81243e+07 0.00299891 1.70179e+07 2.16267e+07 1.73615e+07 297 1.7154e+07 7.44973e+06 0.00254908 1.73151e+07 50.2336 0.0972115 0.995684 0 50.4997 GTEX-11GSP-0011-R11b-SM-5NQ7V B1, A1 9 Brain Brain - Cerebellar Hemisphere 0002037 711 BP-42719 RNA isolation_PAXgene Tissue miRNA 08/26/2013 LCSET-4906 03/22/2014 TruSeq.v1 RNASEQ 0.990732 236082 0.950276 0.992395 0.720905 22723 1 76 0.00234203 112 0 5.92404e+07 0.0492689 941510 5.96944e+07 4.7336e+06 22743 2.94783e+07 0 0.229372 0.992395 0.715422 5.92404e+07 0.00321541 1.28037e+07 8.39909e+06 1.29456e+07 135 1.29549e+07 7.43255e+06 0.00277799 1.28871e+07 49.869 0.0157722 0.994058 0 50.2756 GTEX-11GSP-0011-R1a-SM-9QEJ3 B1, A1 6.7 Brain Brain - Hippocampus 0001954 711 BP-42441 RNA isolation_PAXgene Tissue miRNA 08/19/2013 LCSET-7199 06/06/2015 TruSeq.v1 RNASEQ 0.991406 312699 0.96344 0.994156 0.823411 23572 1 76 0.00189587 267 0 9.29775e+07 0.036354 8.1664e+06 9.3524e+07 4.43817e+06 23596 4.62794e+07 0 0.140029 0.994156 0.8186 9.29775e+07 0.00386478 2.01403e+07 2.1452e+07 2.06088e+07 322 2.0426e+07 7.34733e+06 0.0028776 2.05211e+07 50.1162 0.0873188 0.996906 0 50.5748 GTEX-11GSP-0011-R2b-SM-9QEGE B1, A1 7 Brain Brain - Substantia nigra 0002038 711 BP-42441 RNA isolation_PAXgene Tissue miRNA 08/19/2013 LCSET-7199 06/06/2015 TruSeq.v1 RNASEQ 0.990437 431205 0.96561 0.993497 0.84575 23757 1 76 0.00185071 272 0 8.66014e+07 0.0340802 7.0319e+06 8.71683e+07 4.22903e+06 23774 4.30825e+07 0 0.11986 0.993497 0.84025 8.66014e+07 0.00385759 1.90419e+07 1.50655e+07 1.93774e+07 308 1.93525e+07 1.08654e+07 0.00285106 1.92995e+07 49.9315 0.0806703 0.996557 0 50.4367 GTEX-11GSP-0011-R3a-SM-9QEGF B1, A1 5.9 Brain Brain - Anterior cingulate cortex (BA24) 0009835 711 BP-42441 RNA isolation_PAXgene Tissue miRNA 08/19/2013 LCSET-7199 06/06/2015 TruSeq.v1 RNASEQ 0.990769 500274 0.961794 0.993737 0.843523 22044 1 76 0.00193999 266 0 7.94249e+07 0.0379749 8.80142e+06 7.99255e+07 4.0732e+06 22059 3.95226e+07 0 0.118271 0.993737 0.83824 7.94249e+07 0.00398654 1.72023e+07 2.54047e+07 1.77359e+07 316 1.75626e+07 6.72272e+06 0.00296021 1.75601e+07 49.9964 0.11012 0.996706 0 50.7638 GTEX-11GSP-0011-R5a-SM-57WBE B1, A1 8.4 Brain Brain - Caudate (basal ganglia) 0001873 711 BP-42768 RNA isolation_PAXgene Tissue miRNA 08/27/2013 LCSET-4415 12/21/2013 TruSeq.v1 RNASEQ 0.991578 416488 0.959461 0.993688 0.808175 23693 1 76 0.00202779 154 0 6.4487e+07 0.04016 3.38413e+06 6.48966e+07 7.40512e+06 23716 3.2095e+07 0 0.151286 0.993688 0.803074 6.4487e+07 0.00359213 1.41256e+07 1.36683e+07 1.41364e+07 177 1.41168e+07 7.6494e+06 0.0028083 1.42671e+07 50.2648 0.0521465 0.995797 0 50.0191 GTEX-11GSP-0011-R6b-SM-57WBQ B1, A1 5.9 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 711 BP-42768 RNA isolation_PAXgene Tissue miRNA 08/27/2013 LCSET-4415 12/21/2013 TruSeq.v1 RNASEQ 0.990653 606137 0.9665 0.993291 0.839029 24608 1 76 0.00204819 373 0 1.10273e+08 0.0332094 1.06966e+07 1.11018e+08 1.29771e+07 24635 5.48621e+07 0 0.127471 0.993291 0.8334 1.10273e+08 0.00400389 2.43829e+07 2.81006e+07 2.43932e+07 357 2.42462e+07 1.18203e+07 0.00302344 2.47764e+07 50.5407 0.0963505 0.995928 0 50.0106 GTEX-11GSP-0011-R7b-SM-57WC3 B1, A1 7.8 Brain Brain - Putamen (basal ganglia) 0001874 711 BP-42768 RNA isolation_PAXgene Tissue miRNA 08/27/2013 LCSET-4415 12/21/2013 TruSeq.v1 RNASEQ 0.991065 443029 0.961254 0.993458 0.823489 23753 1 76 0.00202741 268 0 7.74428e+07 0.0384189 5.16448e+06 7.79528e+07 9.30404e+06 23771 3.85397e+07 0 0.137764 0.993458 0.818102 7.74428e+07 0.00381539 1.70073e+07 1.81278e+07 1.70028e+07 268 1.69367e+07 8.50837e+06 0.00291925 1.72426e+07 50.4474 0.0662514 0.995851 0 49.9934 GTEX-11GSP-0011-R8b-SM-5NQ79 B1, A1 6.5 Brain Brain - Hypothalamus 0001898 711 BP-42719 RNA isolation_PAXgene Tissue miRNA 08/26/2013 LCSET-4906 03/22/2014 TruSeq.v1 RNASEQ 0.991256 379997 0.962817 0.992795 0.813583 24827 1 76 0.00215773 376 0 8.99466e+07 0.0369307 7.10641e+06 9.05994e+07 6.82327e+06 24857 4.47755e+07 0 0.149234 0.992795 0.80772 8.99466e+07 0.00308672 1.95527e+07 2.43345e+07 1.99529e+07 331 1.95865e+07 9.11537e+06 0.00262151 2.00383e+07 50.5701 0.0784377 0.994333 0 50.5065 GTEX-11GSP-0011-R9b-SM-5NQ77 B1, A1 7.7 Brain Brain - Spinal cord (cervical c-1) 0006469 711 BP-42719 RNA isolation_PAXgene Tissue miRNA 08/26/2013 LCSET-4906 03/22/2014 TruSeq.v1 RNASEQ 0.992833 331288 0.959634 0.993882 0.82277 23555 1 76 0.00208564 280 0 7.67943e+07 0.0400855 5.42422e+06 7.72671e+07 5.28967e+06 23575 3.82649e+07 0 0.136864 0.993882 0.817736 7.67943e+07 0.00285825 1.6731e+07 1.59111e+07 1.71851e+07 286 1.69298e+07 7.64916e+06 0.00247154 1.70541e+07 50.1828 0.070201 0.99493 0 50.6696 GTEX-11GSP-0126-SM-5A5KU 0 B1 2 pieces; Hashimoto thyroiditis, moderate; 40% fibrovascular and adipose tissue. 6.8 Thyroid Thyroid 0002046 761 575 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.987432 302220 0.969167 0.990698 0.733751 24952 1 76 0.00260843 162 0 8.18671e+07 0.0295571 486270 8.26358e+07 1.09869e+07 24990 4.06493e+07 0 0.235416 0.990698 0.726925 8.18671e+07 0.00456979 1.79117e+07 1.1931e+07 1.81252e+07 181 1.81895e+07 1.17322e+07 0.00358588 1.80973e+07 49.8728 0.00588449 0.993963 0 50.2962 GTEX-11GSP-0226-SM-5A5KV 0 B1 2 pieces: 1 atrophic with 30% fibrosis; other piece is all fibrovascular and adipose, no ovary 7.5 Ovary Ovary 0000992 764 572 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.990197 242130 0.968136 0.99243 0.755469 22746 1 76 0.00204554 140 0 6.61618e+07 0.0315397 62402 6.66664e+07 7.58579e+06 22779 3.29279e+07 0 0.212667 0.99243 0.74975 6.61618e+07 0.00367809 1.45118e+07 8.06590e+06 1.46993e+07 139 1.47276e+07 1.25501e+07 0.00285998 1.46232e+07 49.8222 0.000936033 0.994663 0 50.3209 GTEX-11GSP-0326-SM-5A5KW 2 B1 2 pieces 6.1 Adrenal Gland Adrenal Gland 0002369 765 571 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.991195 282153 0.974147 0.993652 0.799837 21561 1 76 0.00215331 156 0 7.05814e+07 0.0256299 2.85066e+06 7.10323e+07 8.90819e+06 21585 3.51335e+07 0 0.17431 0.993652 0.79476 7.05814e+07 0.00403876 1.55443e+07 1.23773e+07 1.57248e+07 186 1.57307e+07 8.97075e+06 0.00309371 1.56984e+07 49.9486 0.0401318 0.996109 0 50.2886 GTEX-11GSP-0426-SM-5A5KX 2 B1 2 pieces; ducts have PanIN 1 changes 6.9 Pancreas Pancreas 0001150 768 568 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.990741 210993 0.986571 0.993064 0.86525 19526 1 76 0.00228684 80 0 7.6707e+07 0.0128174 184779 7.72427e+07 1.00754e+07 19537 3.81793e+07 0 0.121321 0.993064 0.859249 7.6707e+07 0.00411036 1.79637e+07 3.26021e+07 1.81831e+07 104 1.81443e+07 2.69565e+07 0.00319647 1.81773e+07 50.0454 0.00239219 0.995387 0 50.3036 GTEX-11GSP-0626-SM-5986T 1 B1 2 pieces; central vascular congestion 6.2 Liver Liver 0001114 771 565 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.984022 168199 0.979374 0.988744 0.783102 21271 1 76 0.00285986 119 0 6.67225e+07 0.0204919 1.69154e+06 6.74821e+07 1.42022e+07 21286 3.31347e+07 0 0.196273 0.988744 0.774287 6.67225e+07 0.00680061 1.49251e+07 1.18945e+07 1.45987e+07 159 1.46353e+07 7.03029e+06 0.00482083 1.51586e+07 50.8783 0.0250665 0.993465 0 49.4474 GTEX-11GSP-0726-SM-5986L 2 B1 2 pieces; acute and chronic vascular congestion; pulmonary edema 6.9 Lung Lung 0008952 773 563 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.982971 242112 0.975275 0.987294 0.762549 23438 1 76 0.00295615 134 0 7.14691e+07 0.0243841 212131 7.23889e+07 1.5685e+07 23465 3.54894e+07 0 0.212726 0.987294 0.75286 7.14691e+07 0.00638112 1.57931e+07 8.50484e+06 1.58739e+07 149 1.59691e+07 1.11338e+07 0.00466114 1.59927e+07 50.0368 0.00293044 0.991618 0 50.1276 GTEX-11GSP-0926-SM-9WYSG 1 B1 2 pieces; ductal and lobular units; some sclerosed lobules 7.5 Breast Breast - Mammary Tissue 0008367 775 561 BP-61198 RNA Extraction from Paxgene-derived Lysate Plate Based 03/03/2015 LCSET-7430 07/22/2015 TruSeq.v1 RNASEQ 0.993285 244281 0.974062 0.994677 0.789633 25138 1 76 0.00236153 280 0 1.00748e+08 0.0256063 603645 1.01287e+08 6.32338e+06 25174 5.01924e+07 0 0.184429 0.994677 0.78543 1.00748e+08 0.00456207 2.21912e+07 9.56002e+06 2.24109e+07 279 2.24007e+07 1.74374e+07 0.00346026 2.23337e+07 49.9251 0.00595973 0.996069 0 50.2463 GTEX-11GSP-1026-SM-9WYSH 0 B1 2 pieces 6.6 Adipose Tissue Adipose - Visceral (Omentum) 0010414 778 558 BP-61198 RNA Extraction from Paxgene-derived Lysate Plate Based 03/03/2015 LCSET-7430 07/22/2015 TruSeq.v1 RNASEQ 0.992829 216241 0.975151 0.994096 0.799152 24093 1 76 0.00253971 376 0 1.04553e+08 0.0245686 1.59636e+06 1.05174e+08 7.24712e+06 24123 5.2072e+07 0 0.175999 0.994096 0.794434 1.04553e+08 0.00452468 2.30839e+07 1.16005e+07 2.33204e+07 353 2.32832e+07 1.55562e+07 0.00353093 2.32562e+07 49.9709 0.0151782 0.995363 0 50.2549 GTEX-11GSP-1126-SM-5A5LM 1 B1 6 pieces; well trimmed 7.3 Blood Vessel Artery - Aorta 0001496 777 559 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.99024 148170 0.97627 0.993059 0.807297 21264 1 76 0.0020321 135 0 6.17102e+07 0.0233189 169147 6.21415e+07 7.16974e+06 21281 3.0691e+07 0 0.168973 0.993059 0.801694 6.17102e+07 0.00386213 1.32251e+07 5.50418e+06 1.34145e+07 142 1.34385e+07 1.14326e+07 0.00294452 1.33664e+07 49.8654 0.00272196 0.995879 0 50.3555 GTEX-11GSP-1226-SM-5985M 1 B1 2 pieces; 1 has 60% fat, other has 30% fibroadipose tissue 7.9 Heart Heart - Atrial Appendage 0006631 779 557 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.969309 261045 0.979173 0.973993 0.794175 22063 1 76 0.00261376 153 0 7.72346e+07 0.0205369 1.4432e+06 7.92969e+07 1.66122e+07 22088 3.83457e+07 0 0.184998 0.973993 0.773521 7.72346e+07 0.00638207 1.6229e+07 1.08369e+07 1.60061e+07 173 1.60012e+07 1.20415e+07 0.00448885 1.65523e+07 50.8465 0.0182 0.978678 0 49.6543 GTEX-11GSP-1326-SM-5A5KY 1 B1 2 pieces; 1 with patchy scars up to 2 sq mm; hypertrophied fibers 6 Heart Heart - Left Ventricle 0006566 779 557 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.989153 146604 0.987171 0.992001 0.847424 19827 1 76 0.00220343 266 0 8.28095e+07 0.0127492 5.37868e+06 8.34772e+07 1.00079e+07 19837 4.12231e+07 0 0.139747 0.992001 0.840646 8.28095e+07 0.0043432 1.8494e+07 3.45301e+07 1.81214e+07 306 1.79917e+07 5.2063e+06 0.00327024 1.88235e+07 51.1298 0.0644329 0.99485 0 49.4912 GTEX-11GSP-1626-SM-5986N 2 B1 5 pieces; mucosa severely autolyzed (not suitable for GTEx); muscularis slightly autolyzed 6.8 Colon Colon - Transverse 0001157 787 549 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.983375 276641 0.967957 0.988412 0.7833 23038 1 76 0.00278788 162 0 7.89434e+07 0.0318107 586383 7.98689e+07 1.74192e+07 23059 3.91798e+07 0 0.184657 0.988412 0.774223 7.89434e+07 0.00633173 1.69364e+07 7.81456e+06 1.6994e+07 170 1.7085e+07 1.2449e+07 0.00455077 1.72054e+07 50.1756 0.00734182 0.993448 0 50.0849 GTEX-11GSP-1726-SM-5A5LI 1 B1 6 pieces 6.2 Esophagus Esophagus - Muscularis 0004648 785 551 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.990384 241475 0.971899 0.99271 0.783107 22438 1 76 0.00212836 135 0 6.63751e+07 0.0279058 1.14764e+06 6.68625e+07 7.7272e+06 22462 3.3029e+07 0 0.188792 0.99271 0.777398 6.63751e+07 0.00414973 1.45312e+07 6.5121e+06 1.46535e+07 163 1.46314e+07 8.69445e+06 0.00313668 1.46977e+07 50.1131 0.0171641 0.995036 0 50.2095 GTEX-11GSP-1826-SM-5N9DQ 1 B1 6 pieces; well dissected 7.2 Esophagus Esophagus - Mucosa 0006920 786 550 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.989987 190840 0.976722 0.991347 0.805786 21906 1 76 0.00284166 159 0 7.78823e+07 0.0230752 739523 7.85621e+07 3.75832e+06 21928 3.87828e+07 0 0.170936 0.991347 0.798814 7.78823e+07 0.0034264 1.74645e+07 8.74184e+06 1.76303e+07 188 1.75845e+07 1.253e+07 0.00313363 1.76162e+07 50.045 0.00941323 0.992708 0 50.2362 GTEX-11GSP-2126-SM-5HL5E 2 B1 7 pieces; well dissected mucosa 6.9 Stomach Stomach 0000945 790 546 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.976992 141999 0.988311 0.979132 0.848766 20540 1 76 0.00206438 335 0 7.19096e+07 0.0110543 550073 7.34422e+07 8.55372e+06 20552 3.5769e+07 0 0.139545 0.979132 0.831054 7.19096e+07 0.0031437 1.66889e+07 1.19396e+08 1.73723e+07 226 1.74003e+07 2.23196e+07 0.00260286 1.68122e+07 49.1405 0.00748987 0.981272 0 51.0031 GTEX-11GSP-2226-SM-5HL5Q 2 B1 6 pieces; mucosa largely sloughed 6.6 Vagina Vagina 0000996 790 546 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.989805 200754 0.972033 0.991888 0.708797 23388 1 76 0.00229546 131 0 6.24521e+07 0.0276279 163457 6.29628e+07 7.03074e+06 23422 3.10601e+07 0 0.263235 0.991888 0.703048 6.24521e+07 0.00323416 1.37252e+07 6.27392e+06 1.38107e+07 130 1.3808e+07 9.81252e+06 0.00276382 1.38564e+07 50.0876 0.00259609 0.993972 0 50.1552 GTEX-11GSP-2326-SM-5HL63 0 B1 6 pieces; well dissected 6.9 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 799 537 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.990578 194031 0.968402 0.992571 0.726421 22975 1 76 0.00226317 136 0 5.86559e+07 0.0314193 258356 5.90949e+07 6.006e+06 23003 2.91898e+07 0 0.241981 0.992571 0.721024 5.86559e+07 0.00330944 1.27959e+07 6.17213e+06 1.28812e+07 132 1.28773e+07 8.2896e+06 0.00278526 1.29118e+07 50.0667 0.00437188 0.994564 0 50.1662 GTEX-11GSP-2426-SM-5N9BD 2 B1 2 pieces 6.5 Uterus Uterus 0000995 802 534 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.98903 154253 0.969795 0.989881 0.705506 23979 1 76 0.00306311 171 0 8.98958e+07 0.0299459 248688 9.08148e+07 4.98382e+06 24029 4.47054e+07 0 0.264289 0.989881 0.698367 8.98958e+07 0.0036623 1.97672e+07 8.14777e+06 1.98475e+07 190 1.97638e+07 1.30559e+07 0.00336245 1.99321e+07 50.2121 0.00273841 0.990731 0 50.1013 GTEX-11GSP-2526-SM-5N9BP 1 B1 6 pieces; well dissected 7.4 Skin Skin - Sun Exposed (Lower leg) 0004264 920 416 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.99049 214494 0.972151 0.991725 0.803246 24201 1 76 0.0028966 187 0 8.18033e+07 0.0275733 341591 8.24859e+07 4.35148e+06 24230 4.0712e+07 0 0.168905 0.991725 0.7966 8.18033e+07 0.00363286 1.77827e+07 7.64599e+06 1.78746e+07 196 1.78096e+07 1.35554e+07 0.00326427 1.7945e+07 50.1893 0.00414121 0.99296 0 50.1288 GTEX-11GSP-2726-SM-5A5LJ 0 B1 2 pieces 8.4 Muscle Muscle - Skeletal 0011907 921 415 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.992875 179650 0.984417 0.994761 0.876202 19054 1 76 0.00182769 153 0 6.93543e+07 0.0153783 906483 6.97195e+07 7.98092e+06 19060 3.45556e+07 0 0.108215 0.994761 0.871611 6.93543e+07 0.00344235 1.5146e+07 7.94869e+06 1.51589e+07 166 1.51317e+07 1.44345e+07 0.00263349 1.52949e+07 50.2682 0.0130019 0.996646 0 50.0213 GTEX-11GSP-2826-SM-5A5LK 0 B1 2 pieces; up to 30% internal and external fat 7.4 Nerve Nerve - Tibial 0001323 921 415 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.987977 217946 0.970433 0.991465 0.7596 23170 1 76 0.0021399 136 0 6.09868e+07 0.0292755 209439 6.15118e+07 7.67285e+06 23201 3.03093e+07 0 0.210833 0.991465 0.753117 6.09868e+07 0.00407392 1.33738e+07 5.79225e+06 1.35455e+07 139 1.3591e+07 9.54703e+06 0.00310351 1.35271e+07 49.8821 0.00340486 0.994953 0 50.3189 GTEX-11GSP-2926-SM-5N9C2 1 B1 2 pieces; 1 piece heavily [50%] calcified, other focally; fatty external 'tail' on 1 piece 7.8 Blood Vessel Artery - Tibial 0007610 922 414 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.99162 177770 0.976279 0.992637 0.836422 21170 1 76 0.00271882 167 0 7.69919e+07 0.0233739 287058 7.7563e+07 3.99465e+06 21183 3.83216e+07 0 0.139857 0.992637 0.830263 7.69919e+07 0.00338352 1.65009e+07 6.08515e+06 1.65761e+07 182 1.64895e+07 1.46641e+07 0.00305083 1.66673e+07 50.2681 0.00370097 0.993655 0 50.1138 GTEX-11GSP-3026-SM-5N9CE 1 B1 3 pieces: largest and 1 smaller piece mostly anterior; other small piece all posterior [annotated] 6.7 Pituitary Pituitary 0000007 960 376 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.989586 309477 0.969057 0.990813 0.762332 25097 1 76 0.00298325 162 0 7.67749e+07 0.0307491 1.48507e+06 7.74868e+07 4.06192e+06 25125 3.81947e+07 0 0.206725 0.990813 0.755328 7.67749e+07 0.00379672 1.68552e+07 8.29884e+06 1.70070e+07 194 1.69278e+07 8.99637e+06 0.00338948 1.70275e+07 50.1467 0.0191655 0.99204 0 50.2242 GTEX-11GSP-3126-SM-5A5LL 1 B1 2 pieces 6.9 Brain Brain - Cerebellum 0002037 961 375 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.988479 331083 0.953412 0.991377 0.735192 24118 1 76 0.00236444 201 0 8.30745e+07 0.0462092 1.32989e+06 8.3797e+07 1.03561e+07 24156 4.13056e+07 0 0.218219 0.991377 0.728853 8.30745e+07 0.00410241 1.80528e+07 1.50041e+07 1.82048e+07 233 1.82665e+07 1.02861e+07 0.00323089 1.82086e+07 49.9207 0.0158704 0.994275 0 50.2097 GTEX-11GSP-3226-SM-5986O 1 B1 2 pieces 6.1 Brain Brain - Cortex 0001870 962 374 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.982585 265811 0.972017 0.988281 0.841817 23284 1 76 0.00280908 266 0 7.80388e+07 0.0277075 6.54677e+06 7.89642e+07 1.93631e+07 23304 3.87208e+07 0 0.1302 0.988281 0.831951 7.80388e+07 0.00670279 1.73197e+07 2.06081e+07 1.71531e+07 266 1.7122e+07 7.53432e+06 0.00474471 1.77039e+07 50.8354 0.0829081 0.993976 0 49.7583 GTEX-11H98-0008-SM-5QGR8 B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 733 BP-40621 RNA isolation_Trizol Manual (Cell Pellet) 07/10/2013 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.994699 340932 0.974931 0.995683 0.873752 18307 1 76 0.00156528 118 0 5.2178e+07 0.0247286 213609 5.24042e+07 3.56947e+06 18311 2.60141e+07 0 0.101179 0.995683 0.86998 5.2178e+07 0.00232083 1.1649e+07 9.07723e+06 1.16986e+07 116 1.16828e+07 1.34216e+07 0.00194268 1.1727e+07 50.0944 0.00407618 0.996667 0 50.1062 GTEX-11H98-0011-R10b-SM-5NQ98 B1, A1 8.1 Brain Brain - Frontal Cortex (BA9) 0009834 613 BP-42719 RNA isolation_PAXgene Tissue miRNA 08/26/2013 LCSET-4906 03/22/2014 TruSeq.v1 RNASEQ 0.992549 444931 0.959981 0.994185 0.837459 23278 1 76 0.00187844 200 0 7.22147e+07 0.039573 1.97199e+06 7.26371e+07 5.63893e+06 23292 3.59703e+07 0 0.122521 0.994185 0.83259 7.22147e+07 0.00265857 1.57096e+07 1.47162e+07 1.58178e+07 246 1.58133e+07 9.58205e+06 0.00226786 1.58339e+07 50.0325 0.0271485 0.995822 0 50.1716 GTEX-11H98-0011-R11b-SM-5NQ6U B1, A1 9.2 Brain Brain - Cerebellar Hemisphere 0002037 613 BP-42719 RNA isolation_PAXgene Tissue miRNA 08/26/2013 LCSET-4906 03/22/2014 TruSeq.v1 RNASEQ 0.992075 367638 0.943245 0.993427 0.733137 23697 1 76 0.00217476 155 0 7.3341e+07 0.0562527 608642 7.38263e+07 5.30564e+06 23727 3.65236e+07 0 0.210109 0.993427 0.728317 7.3341e+07 0.00284567 1.57327e+07 1.1256e+07 1.58183e+07 178 1.58317e+07 1.00848e+07 0.00250976 1.58132e+07 49.9707 0.00824424 0.994778 0 50.1356 GTEX-11H98-0011-R5b-SM-57WCF B1, A1 7.4 Brain Brain - Caudate (basal ganglia) 0001873 613 BP-42768 RNA isolation_PAXgene Tissue miRNA 08/27/2013 LCSET-4415 12/21/2013 TruSeq.v1 RNASEQ 0.991959 653747 0.958441 0.99414 0.837815 23360 1 76 0.00181014 199 0 7.48298e+07 0.0411465 2.51093e+06 7.52709e+07 8.76304e+06 23376 3.72512e+07 0 0.120625 0.99414 0.832906 7.48298e+07 0.00340639 1.63847e+07 1.86042e+07 1.63404e+07 254 1.63305e+07 9.98361e+06 0.00260652 1.65442e+07 50.325 0.0333585 0.99632 0 49.9323 GTEX-11H98-0011-R8a-SM-5NQ8V B1, A1 7.7 Brain Brain - Hypothalamus 0001898 613 BP-42719 RNA isolation_PAXgene Tissue miRNA 08/26/2013 LCSET-4906 03/22/2014 TruSeq.v1 RNASEQ 0.99355 320507 0.960078 0.99522 0.820007 23115 1 76 0.00180757 234 0 7.22601e+07 0.0396009 1.75432e+06 7.26071e+07 5.67088e+06 23133 3.59963e+07 0 0.140072 0.99522 0.816087 7.22601e+07 0.00253921 1.58135e+07 1.21401e+07 1.61933e+07 226 1.60766e+07 1.00702e+07 0.00217277 1.60363e+07 49.9372 0.0241618 0.99689 0 50.5933 GTEX-11H98-0126-SM-5EGHG 1 B1 6 pieces; well trimmed 7.8 Skin Skin - Sun Exposed (Lower leg) 0004264 733 598 BP-43495 RNA Extraction from Paxgene-derived Lysate Plate Based 09/12/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.98356 207885 0.978786 0.988724 0.799149 22438 1 76 0.00247422 156 0 6.20247e+07 0.0208735 196574 6.27321e+07 1.03654e+07 22462 3.07718e+07 0 0.179637 0.988724 0.790138 6.20247e+07 0.00580066 1.35777e+07 7.98834e+06 1.3671e+07 136 1.37789e+07 1.21141e+07 0.00412876 1.37759e+07 49.9946 0.00313355 0.993888 0 50.1712 GTEX-11H98-0226-SM-5NQ89 1 B1 3 pieces; 20% fibrous component 6.7 Adipose Tissue Adipose - Subcutaneous 0002190 736 596 BP-43495 RNA Extraction from Paxgene-derived Lysate Plate Based 09/12/2013 LCSET-4906 03/22/2014 TruSeq.v1 RNASEQ 0.991194 244895 0.975123 0.993706 0.832798 21795 1 76 0.00193023 158 0 7.2129e+07 0.0246137 288224 7.25859e+07 5.29752e+06 21810 3.58731e+07 0 0.142325 0.993706 0.827556 7.2129e+07 0.00303704 1.56509e+07 7.45623e+06 1.57865e+07 175 1.57343e+07 1.36291e+07 0.00248224 1.58874e+07 50.242 0.0039708 0.996217 0 50.2157 GTEX-11H98-0326-SM-5HL4S 1 B1 3 pieces; no fat 8.1 Muscle Muscle - Skeletal 0011907 744 589 BP-43529 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.992223 258535 0.982492 0.994391 0.847981 20218 1 76 0.00178829 205 0 7.84255e+07 0.0173215 813172 7.88678e+07 8.72062e+06 20231 3.90475e+07 0 0.134511 0.994391 0.843224 7.84255e+07 0.00274637 1.73254e+07 9.74401e+06 1.74269e+07 220 1.73808e+07 1.47026e+07 0.00226628 1.75267e+07 50.2091 0.0103106 0.996559 0 50.1459 GTEX-11H98-0426-SM-5HL55 0 B1 2 pieces; no fat 7.4 Nerve Nerve - Tibial 0001323 746 587 BP-43529 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.98953 252965 0.969138 0.992074 0.746204 23404 1 76 0.00211947 161 0 6.89045e+07 0.0305776 145170 6.9455e+07 7.6126e+06 23437 3.42588e+07 0 0.222934 0.992074 0.74029 6.89045e+07 0.0032431 1.51304e+07 6.64435e+06 1.52207e+07 153 1.52089e+07 1.1225e+07 0.00267985 1.53129e+07 50.1703 0.00209013 0.994618 0 50.1487 GTEX-11H98-0426-SM-EZ6XS 0 B1 2 pieces; no fat Nerve Nerve - Tibial 0001323 746 587 BP-83108 DNA Extraction from Paxgene-derived Lysate Plate Based 02/07/2017 LCSET-11114 06/09/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-11I78-0001-SM-5Q5BE B1 9.9 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -86 BP-40621 RNA isolation_Trizol Manual (Cell Pellet) 07/10/2013 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.990804 475947 0.963116 0.9931 0.747279 20003 1 76 0.00183861 128 0 5.69194e+07 0.0365871 426624 5.73149e+07 3.9383e+06 20030 2.83065e+07 0 0.215837 0.9931 0.742123 5.69194e+07 0.00284121 1.25261e+07 1.13705e+07 1.26025e+07 122 1.26125e+07 1.2039e+07 0.00233875 1.26533e+07 50.0806 0.00744351 0.995395 0 50.1521 GTEX-11I78-0002-SM-58Q8G B1 Blood Whole Blood 0013756 -86 BP-39533 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/31/2013 LCSET-4574 01/20/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-11I78-0002-SM-5DWT9 B1 Blood Whole Blood 0013756 -86 BP-39533 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/31/2013 GTEx_OM25_Dec_01 01/28/2014 Illumina OMNI SNP Array OMNI GTEX-11I78-0002-SM-6WBU2 B1 Blood Whole Blood 0013756 -86 BP-39533 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/31/2013 LCSET-6056 09/22/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-11I78-0005-SM-5N9GB B1 8.8 Blood Whole Blood 0013756 -86 BP-39537 RNA isolation_PAXgene Blood RNA (Manual) 05/31/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.987775 941386 0.9548 0.989394 0.801851 19648 1 76 0.00425953 204 0 9.86196e+07 0.0447311 278604 9.96768e+07 5.1586e+06 19660 4.9058e+07 0 0.152949 0.989394 0.793347 9.86196e+07 0.00422999 2.14737e+07 5.21522e+07 2.16867e+07 235 2.17154e+07 2.0346e+07 0.00424478 2.16075e+07 49.8755 0.00279507 0.991013 0 50.2468 GTEX-11I78-0008-SM-5Q5DI B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 162 BP-40621 RNA isolation_Trizol Manual (Cell Pellet) 07/10/2013 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.993343 271191 0.981046 0.995164 0.865559 21288 1 76 0.00177006 285 0 9.8511e+07 0.018629 325405 9.89897e+07 1.33783e+07 21308 4.90824e+07 0 0.115487 0.995164 0.861373 9.8511e+07 0.00284618 2.22616e+07 1.22298e+07 2.22956e+07 262 2.23138e+07 2.64814e+07 0.00230714 2.24223e+07 50.1213 0.00328726 0.996985 0 50.0381 GTEX-11I78-0126-SM-5HL6F 1 B1 2 pieces, dense congestion, hemosiderin laden macrophages distending alveoli; fibrin deposition 7.2 Lung Lung 0008952 80 1314 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.990386 244011 0.971419 0.992792 0.773567 23884 1 76 0.00208162 158 0 7.50121e+07 0.0283591 323679 7.55567e+07 8.35743e+06 23922 3.73341e+07 0 0.197852 0.992792 0.767992 7.50121e+07 0.00291352 1.65395e+07 8.04802e+06 1.67524e+07 189 1.67342e+07 1.14026e+07 0.00249656 1.67247e+07 49.9857 0.00428392 0.995199 0 50.3198 GTEX-11I78-0226-SM-5HL6R 1 B1 2 pieces, minimal vascularity/fibrosis 6.8 Adipose Tissue Adipose - Visceral (Omentum) 0010414 81 1313 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.992212 237739 0.977898 0.994301 0.850976 21754 1 76 0.0018938 204 0 7.66341e+07 0.0218459 905390 7.70734e+07 8.47333e+06 21765 3.81594e+07 0 0.126922 0.994301 0.846126 7.66341e+07 0.00280665 1.68591e+07 9.49904e+06 1.70312e+07 242 1.69873e+07 1.2703e+07 0.00234927 1.70547e+07 50.099 0.0117471 0.99639 0 50.2538 GTEX-11I78-0526-SM-5986A 1 B1 2 pieces, features of mulinodular goitre 6.9 Thyroid Thyroid 0002046 85 1309 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.982023 256049 0.97028 0.988281 0.781269 23625 1 76 0.00252722 135 0 7.55295e+07 0.0294647 381351 7.64251e+07 1.74096e+07 23649 3.74513e+07 0 0.189011 0.988281 0.772113 7.55295e+07 0.00719008 1.65589e+07 8.30832e+06 1.66057e+07 162 1.67224e+07 1.17852e+07 0.00484389 1.68771e+07 50.2303 0.00498987 0.994539 0 50.0705 GTEX-11I78-0626-SM-5A5LZ 1 B1 2 pieces, well preserved, Islets well visualized (rep delineated). 7.8 Pancreas Pancreas 0001150 86 1308 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.991484 211254 0.981307 0.993935 0.865554 20915 1 76 0.00183639 91 0 6.86752e+07 0.0184187 176719 6.90942e+07 8.56435e+06 20929 3.419e+07 0 0.115752 0.993935 0.860305 6.86752e+07 0.00354195 1.58527e+07 1.9558e+07 1.59735e+07 115 1.59398e+07 2.12397e+07 0.00268707 1.60519e+07 50.1752 0.00255765 0.996386 0 50.1899 GTEX-11I78-0726-SM-5A5M1 1 B1 6 pieces, minimal atherosis 7.2 Blood Vessel Artery - Aorta 0001496 88 1306 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.990754 311105 0.970623 0.993557 0.79726 22683 1 76 0.00190158 131 0 6.21633e+07 0.029084 178444 6.25664e+07 7.05127e+06 22701 3.09172e+07 0 0.173363 0.993557 0.792124 6.21633e+07 0.00372321 1.35298e+07 6.56482e+06 1.36676e+07 145 1.36656e+07 1.08271e+07 0.00280983 1.36975e+07 50.0583 0.00285207 0.996361 0 50.2534 GTEX-11I78-0826-SM-5A5K4 1 B1 2 pieces, minimal ischemic changes 8.4 Heart Heart - Left Ventricle 0006566 90 1304 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.992358 218518 0.982905 0.994495 0.866855 20456 1 76 0.00168675 196 0 7.67355e+07 0.0167951 1.4215e+06 7.71602e+07 8.97699e+06 20462 3.82211e+07 0 0.11605 0.994495 0.862084 7.67355e+07 0.00342629 1.69755e+07 1.33486e+07 1.68013e+07 240 1.67983e+07 1.41983e+07 0.00255465 1.71158e+07 50.468 0.0184227 0.996633 0 49.7421 GTEX-11I78-1026-SM-5HL74 1 B1 2 pieces, minimal atherosis; one is fragment of vessel wall; the other is complete, adherent nubbins of fat, delineated, up to ~2mm 6.4 Blood Vessel Artery - Coronary 0001621 101 1293 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.992312 205823 0.972646 0.994317 0.821177 22181 1 76 0.00194423 161 0 6.6484e+07 0.0270815 341882 6.6864e+07 7.41047e+06 22198 3.31024e+07 0 0.151469 0.994317 0.81651 6.6484e+07 0.00289569 1.44701e+07 5.86688e+06 1.46182e+07 166 1.45749e+07 1.11454e+07 0.002419 1.46399e+07 50.1113 0.00511309 0.996322 0 50.2545 GTEX-11I78-1126-SM-5A5K5 1 B1 6 pieces, abundant lymphoid aggregates, rep. ones delineated 6.6 Small Intestine Small Intestine - Terminal Ileum 0001211 109 1285 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.989243 236304 0.968557 0.99216 0.773847 24006 1 76 0.00208232 214 0 7.81778e+07 0.0311624 695983 7.87955e+07 9.31208e+06 24033 3.88941e+07 0 0.19471 0.99216 0.767781 7.81778e+07 0.0043354 1.72415e+07 1.11594e+07 1.73274e+07 214 1.73074e+07 1.08451e+07 0.00320555 1.74681e+07 50.2311 0.00883277 0.995077 0 50.1241 GTEX-11I78-1226-SM-5A5K6 1 B1 6 pieces, mucosa well- preserved, up to ~0.5mm thick 7.6 Colon Colon - Transverse 0001157 113 1281 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.990693 195576 0.974327 0.99283 0.813466 22979 1 76 0.00191514 216 0 7.9251e+07 0.0253395 1.19637e+06 7.98234e+07 9.24930e+06 23001 3.94661e+07 0 0.160862 0.99283 0.807633 7.9251e+07 0.00364206 1.76058e+07 1.45916e+07 1.75039e+07 251 1.74658e+07 1.10674e+07 0.00277674 1.77911e+07 50.4613 0.0149877 0.994967 0 49.8549 GTEX-11I78-1326-SM-5PNY9 1 B1 6 pieces, all muscularis, good specimens 8.2 Colon Colon - Sigmoid 0001159 118 1276 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.992831 186972 0.97829 0.99356 0.856671 21124 1 76 0.0028589 214 0 8.57996e+07 0.0214175 540669 8.63558e+07 2.52742e+06 21135 4.27515e+07 0 0.121619 0.99356 0.851154 8.57996e+07 0.00324737 1.86218e+07 6.38963e+06 1.88185e+07 240 1.87205e+07 1.645e+07 0.00305299 1.87804e+07 50.0798 0.00626095 0.994289 0 50.2627 GTEX-11I78-1426-SM-5PNVY 1 B1 6 pieces, all muscularis, good specimens 8.5 Esophagus Esophagus - Muscularis 0004648 120 1274 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.991506 229145 0.976424 0.99397 0.848431 20583 1 76 0.00178272 147 0 5.75317e+07 0.0232432 383628 5.78807e+07 5.71877e+06 20591 2.86254e+07 0 0.127993 0.99397 0.843315 5.75317e+07 0.00295754 1.24468e+07 4.5417e+06 1.25319e+07 145 1.25027e+07 1.05722e+07 0.00236868 1.26093e+07 50.2122 0.00662791 0.996434 0 50.1702 GTEX-11I78-1526-SM-5A5K7 1 B1 6 pieces, squamous mucosa is ~0.3mm, ~25-30% thickness 8.9 Esophagus Esophagus - Mucosa 0006920 121 1273 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.9915 269982 0.978449 0.99352 0.841928 21125 1 76 0.00194218 168 0 7.20792e+07 0.0211146 299964 7.25493e+07 8.16114e+06 21142 3.58922e+07 0 0.13652 0.99352 0.836472 7.20792e+07 0.00353642 1.62656e+07 1.02221e+07 1.63902e+07 173 1.64087e+07 1.49402e+07 0.00273768 1.63825e+07 49.96 0.00413462 0.995539 0 50.1909 GTEX-11I78-1626-SM-5A5M2 1 B1 6 pieces, all muscularis 6.1 Esophagus Esophagus - Gastroesophageal Junction 0004550 123 1271 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4423 01/29/2014 TruSeq.v1 EXCLUDE 0.990983 239128 0.976664 0.993428 0.855221 22280 1 76 0.00182144 203 0 8.13654e+07 0.0230625 862862 8.19036e+07 9.90646e+06 22292 4.05016e+07 0 0.121442 0.993428 0.849601 8.13654e+07 0.00372448 1.80062e+07 8.31349e+06 1.81614e+07 253 1.8114e+07 1.2958e+07 0.00277062 1.82419e+07 50.1759 0.0105351 0.995873 0 50.2146 GTEX-11I78-1726-SM-5A5M3 1 B1 6 pieces, mucosa extremely well preserved, up to ~1mm or ~40% thickness 7.8 Stomach Stomach 0000945 125 1269 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.982964 462359 0.975684 0.987328 0.817515 22941 1 76 0.00182527 296 0 8.39695e+07 0.0239291 874167 8.50472e+07 1.0824e+07 22964 4.16423e+07 0 0.158168 0.987328 0.807156 8.39695e+07 0.00410005 1.90493e+07 6.98992e+07 1.90915e+07 233 1.91437e+07 1.85763e+07 0.00295763 1.93616e+07 50.283 0.0102786 0.991692 0 50.0554 GTEX-11I78-1826-SM-5A5M4 1 B1 2 pieces, all cortex, minimal fat 8.5 Adrenal Gland Adrenal Gland 0002369 128 1266 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.991328 304288 0.975629 0.99349 0.818699 23663 1 76 0.00185983 271 0 9.01052e+07 0.0239952 1.20979e+06 9.06956e+07 9.69314e+06 23692 4.48582e+07 0 0.15693 0.99349 0.81337 9.01052e+07 0.00351184 1.98557e+07 1.45588e+07 1.98329e+07 265 1.98049e+07 1.41327e+07 0.00268404 2.00679e+07 50.3297 0.013339 0.995653 0 49.9713 GTEX-11I78-1926-SM-59878 1 B1 2 pieces, typical post menopausal involutional changes 8.6 Ovary Ovary 0000992 130 1264 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.98642 316202 0.971913 0.990984 0.790426 22849 1 76 0.00250178 145 0 7.24896e+07 0.0277672 135562 7.31491e+07 1.38891e+07 22876 3.59959e+07 0 0.181488 0.990984 0.783299 7.24896e+07 0.00635435 1.599e+07 8.69354e+06 1.60993e+07 151 1.62059e+07 1.35909e+07 0.00441919 1.61958e+07 49.9844 0.00185323 0.995548 0 50.1703 GTEX-11I78-2026-SM-5987C 1 B1 6 pieces; squamous mucosa is ~0.25mm thick, 10% total thickness 8.7 Vagina Vagina 0000996 143 1251 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.985711 295429 0.972993 0.989457 0.78713 22297 1 76 0.00262053 142 0 7.21435e+07 0.0267561 184395 7.29122e+07 1.47132e+07 22313 3.58598e+07 0 0.185863 0.989457 0.778831 7.21435e+07 0.0060244 1.61e+07 1.03554e+07 1.60766e+07 153 1.61613e+07 1.26725e+07 0.00431603 1.62713e+07 50.1696 0.002529 0.993202 0 49.9636 GTEX-11I78-2126-SM-5A5K8 1 B1 2 pieces, myometrium, foci of adenomyosis in one section (rep. foci delineated) 8.3 Uterus Uterus 0000995 145 1249 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.990085 288779 0.968892 0.992872 0.799834 23663 1 76 0.00189303 217 0 9.00526e+07 0.0307952 137094 9.0699e+07 1.19104e+07 23693 4.48098e+07 0 0.169059 0.992872 0.794133 9.00526e+07 0.00367749 1.96442e+07 8.81973e+06 1.98556e+07 251 1.98895e+07 1.65007e+07 0.00278276 1.98442e+07 49.9431 0.00151153 0.99566 0 50.2675 GTEX-11I78-2226-SM-5PNYA 0 B1 2 pieces, one with prominent fibrocystic change (ensquared), prominent focus of apocrine metaplasia (delineated) 6.7 Breast Breast - Mammary Tissue 0008367 147 1247 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.991745 186175 0.973429 0.992452 0.814856 23738 1 76 0.00294823 207 0 8.28758e+07 0.0263376 674878 8.35061e+07 2.22433e+06 23767 4.12928e+07 0 0.158573 0.992452 0.808705 8.28758e+07 0.00346239 1.81601e+07 8.06957e+06 1.84972e+07 226 1.8369e+07 1.2452e+07 0.00320513 1.83448e+07 49.9671 0.00808178 0.993159 0 50.4598 GTEX-11I78-2326-SM-5Q5AH 0 B1 2 pieces, clean specimens, no adherent fat 6.9 Blood Vessel Artery - Tibial 0007610 157 1237 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.990495 160328 0.974768 0.992894 0.849491 21770 1 76 0.00166435 209 0 8.65711e+07 0.0248419 268633 8.71906e+07 6.42762e+06 21784 4.30735e+07 0 0.125277 0.992894 0.843455 8.65711e+07 0.00266305 1.86066e+07 6.66178e+06 1.87375e+07 255 1.87131e+07 1.72327e+07 0.00216249 1.8828e+07 50.1531 0.00308099 0.995293 0 50.1753 GTEX-11I78-2426-SM-5A5K9 0 B1 2 pieces, ~10% interstitial fat, rep foci delineated 8.3 Muscle Muscle - Skeletal 0011907 159 1235 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.991658 223689 0.982766 0.994049 0.881448 19287 1 76 0.00170103 209 0 7.83543e+07 0.0170155 1.14963e+06 7.88234e+07 8.90162e+06 19291 3.90185e+07 0 0.101318 0.994049 0.876202 7.83543e+07 0.00346213 1.72019e+07 1.04009e+07 1.72826e+07 238 1.72995e+07 1.63881e+07 0.00257946 1.73497e+07 50.0725 0.0145849 0.996441 0 50.1169 GTEX-11I78-2626-SM-5Q5AI 0 B1 2 pieces, ~5% fascia/vascular tissue, delineated 6.3 Adipose Tissue Adipose - Subcutaneous 0002190 163 1231 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.989537 178104 0.976525 0.992383 0.829628 22109 1 76 0.00172193 173 0 7.49756e+07 0.0231769 298794 7.5551e+07 5.96691e+06 22130 3.72941e+07 0 0.146897 0.992383 0.823309 7.49756e+07 0.0027205 1.64851e+07 7.29172e+06 1.65694e+07 195 1.65634e+07 1.35487e+07 0.00221978 1.6695e+07 50.1978 0.00395486 0.99523 0 50.1275 GTEX-11ILO-0002-SM-5CV9V C1 Blood Whole Blood 0013756 362 BP-39533 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/31/2013 LCSET-4800 02/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-11ILO-0006-SM-5LZWE C1 9.2 Blood Whole Blood 0013756 362 BP-39537 RNA isolation_PAXgene Blood RNA (Manual) 05/31/2013 LCSET-4900 03/23/2014 TruSeq.v1 EXCLUDE 0.989961 510487 0.969615 0.991577 0.771265 20401 1 76 0.00273463 117 0 6.87203e+07 0.0300041 103371 6.93041e+07 3.55378e+06 20423 3.42106e+07 0 0.198351 0.991577 0.764768 6.87203e+07 0.00345162 1.54187e+07 4.08267e+07 1.5593e+07 127 1.56508e+07 1.50751e+07 0.00309254 1.54788e+07 49.7237 0.00149156 0.993193 0 50.2811 GTEX-11ILO-0008-SM-5QGR9 C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 373 BP-40621 RNA isolation_Trizol Manual (Cell Pellet) 07/10/2013 LCSET-4954 03/29/2014 TruSeq.v1 EXCLUDE 0.994268 227405 0.976277 0.995456 0.859839 19771 1 76 0.00153917 158 0 6.09878e+07 0.0233631 184323 6.12662e+07 4.36562e+06 19779 3.03977e+07 0 0.116438 0.995456 0.855932 6.09878e+07 0.00231155 1.36133e+07 7.06324e+06 1.36924e+07 141 1.36811e+07 1.46328e+07 0.0019249 1.36994e+07 50.0334 0.00300856 0.996643 0 50.1448 GTEX-11ILO-0126-SM-5A5LN 0 C1 6 pieces; up to 40% internal fat 7.1 Skin Skin - Sun Exposed (Lower leg) 0004264 372 1103 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4423 01/29/2014 TruSeq.v1 EXCLUDE 0.988999 215000 0.970153 0.991763 0.789158 24005 1 76 0.00200965 169 0 7.0958e+07 0.029669 407312 7.15473e+07 8.68529e+06 24028 3.53094e+07 0 0.180995 0.991763 0.782657 7.0958e+07 0.00389327 1.55117e+07 7.71347e+06 1.56487e+07 172 1.56508e+07 1.12859e+07 0.00294884 1.5694e+07 50.0688 0.0056929 0.994528 0 50.2198 GTEX-11ILO-0226-SM-5N9D3 0 C1 2 pieces 7.5 Adipose Tissue Adipose - Subcutaneous 0002190 374 1102 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 EXCLUDE 0.991632 216994 0.973964 0.993016 0.786443 23714 1 76 0.00287569 163 0 7.57155e+07 0.0257524 252878 7.6248e+07 3.75502e+06 23746 3.77029e+07 0 0.187521 0.993016 0.78095 7.57155e+07 0.00343348 1.66886e+07 6.55359e+06 1.68116e+07 174 1.67972e+07 1.26728e+07 0.00315419 1.68017e+07 50.0066 0.00331652 0.9944 0 50.1837 GTEX-11ILO-0426-SM-5HL4V 0 C1 2 pieces; 10 & 30% internal fat; 10 & 30 % external fat 6.6 Nerve Nerve - Tibial 0001323 378 1100 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4806 03/02/2014 TruSeq.v1 EXCLUDE 0.986134 293170 0.963621 0.988296 0.755909 24372 1 76 0.00211967 157 0 7.58546e+07 0.0360999 184435 7.67529e+07 7.52195e+06 24408 3.77056e+07 0 0.207712 0.988296 0.747062 7.58546e+07 0.00332108 1.65753e+07 1.02782e+07 1.67002e+07 172 1.66556e+07 1.21503e+07 0.00271906 1.67816e+07 50.1884 0.00240297 0.990459 0 50.1876 GTEX-11ILO-0526-SM-5N9DF 1 C1 2 pieces; mild medial calcification; no external fat 7.8 Blood Vessel Artery - Tibial 0007610 379 1100 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 EXCLUDE 0.993412 154967 0.974018 0.994241 0.833791 21696 1 76 0.00267242 143 0 7.18136e+07 0.0256429 253755 7.22296e+07 3.50853e+06 21711 3.57713e+07 0 0.140227 0.994241 0.82899 7.18136e+07 0.00313816 1.54577e+07 5.21448e+06 1.55313e+07 163 1.54712e+07 1.42045e+07 0.0029051 1.55773e+07 50.1708 0.00351317 0.99507 0 50.1188 GTEX-11ILO-0626-SM-5A5LO 1 C1 6 pieces; well trimmed 7.5 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 381 1099 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4423 01/29/2014 TruSeq.v1 EXCLUDE 0.990802 210026 0.975808 0.993417 0.82198 23014 1 76 0.00197349 172 0 6.96931e+07 0.023967 269666 7.01549e+07 8.28838e+06 23035 3.46895e+07 0 0.153828 0.993417 0.816569 6.96931e+07 0.00388126 1.5285e+07 7.58235e+06 1.54096e+07 170 1.54287e+07 1.23982e+07 0.00292486 1.54372e+07 50.0138 0.00384387 0.996032 0 50.203 GTEX-11ILO-0726-SM-5HL5I 1 C1 2 pieces; pleura [not target] along 1 surface [annotated] 6.7 Lung Lung 0008952 396 1085 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4806 03/02/2014 TruSeq.v1 EXCLUDE 0.989373 270954 0.969488 0.991696 0.762154 22200 1 76 0.00225872 128 0 6.3293e+07 0.030279 330771 6.3823e+07 7.40846e+06 22219 3.14608e+07 0 0.207334 0.991696 0.755825 6.3293e+07 0.00341652 1.37991e+07 1.10376e+07 1.39531e+07 142 1.39205e+07 1.0688e+07 0.00283627 1.39775e+07 50.1023 0.00518263 0.994018 0 50.2774 GTEX-11ILO-1026-SM-5A5LP 1 C1 4 pieces; partial sloughing of epithelium; glandular atrophy and squamous metaplasia of glandular ducts 6.2 Esophagus Esophagus - Mucosa 0006920 405 1078 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4423 01/29/2014 TruSeq.v1 EXCLUDE 0.989381 250763 0.970041 0.992481 0.798226 22606 1 76 0.00199694 135 0 6.0516e+07 0.0298081 466278 6.09744e+07 6.92456e+06 22620 3.00999e+07 0 0.171815 0.992481 0.792225 6.0516e+07 0.00400848 1.34824e+07 7.40399e+06 1.35595e+07 155 1.35703e+07 8.39633e+06 0.00299957 1.36512e+07 50.1487 0.00764711 0.995581 0 50.1425 GTEX-11ILO-1526-SM-5A5KZ 2 C1 2 pieces; 40% internal and external fat 6.4 Pancreas Pancreas 0001150 415 1071 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 EXCLUDE 0.990414 294588 0.965908 0.992969 0.779559 22530 1 76 0.00213411 111 0 7.08981e+07 0.0337817 240728 7.14001e+07 8.72915e+06 22557 3.52782e+07 0 0.186349 0.992969 0.774078 7.08981e+07 0.00416056 1.58707e+07 1.5816e+07 1.61247e+07 123 1.61168e+07 1.61527e+07 0.00314473 1.60578e+07 49.9084 0.00337154 0.995524 0 50.397 GTEX-11ILO-2026-SM-5N9CQ 3 C1 6 pieces; mucosa=3; muscle=1 5.9 Colon Colon - Transverse 0001157 433 1057 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 EXCLUDE 0.987529 247752 0.96882 0.988493 0.830939 23154 1 76 0.00384381 139 0 6.95391e+07 0.0268825 159621 7.03486e+07 3.36494e+06 23167 3.44477e+07 0 0.137881 0.988493 0.821378 6.95391e+07 0.00453264 1.51957e+07 9.47668e+06 1.52592e+07 161 1.52237e+07 1.18884e+07 0.00418789 1.52969e+07 50.1199 0.002269 0.989457 0 50.1042 GTEX-11ILO-2226-SM-5A5L1 1 C1 2 pieces; 1 piece with ducts and atrophic lobules; 1 with 80%, other with 50% fat 7 Breast Breast - Mammary Tissue 0008367 440 1052 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 EXCLUDE 0.990726 266149 0.970442 0.993144 0.740551 24872 1 76 0.0020898 165 0 7.9809e+07 0.0292956 306037 8.036e+07 9.71419e+06 24914 3.97198e+07 0 0.229891 0.993144 0.735474 7.9809e+07 0.00376797 1.75975e+07 8.30448e+06 1.77374e+07 183 1.77643e+07 1.21383e+07 0.00292684 1.77512e+07 49.9815 0.00380833 0.995562 0 50.1979 GTEX-11ILO-2526-SM-5A5LQ 1 C1 2 pieces 6.2 Heart Heart - Atrial Appendage 0006631 453 1040 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4423 01/29/2014 TruSeq.v1 EXCLUDE 0.990212 305670 0.975398 0.993213 0.781154 23071 1 76 0.0018625 193 0 8.45723e+07 0.0243598 1.42952e+06 8.51502e+07 9.85494e+06 23101 4.20693e+07 0 0.194244 0.993213 0.775852 8.45723e+07 0.00383148 1.75698e+07 8.46136e+06 1.76811e+07 205 1.77043e+07 1.35241e+07 0.00284402 1.7775e+07 50.0996 0.0167882 0.996213 0 50.1577 GTEX-11ILO-2626-SM-DLIPH 2 C1 2 pieces both atrophic with fibrosis, 1 with 50% adjacent fibroadipose tissue; other with 90%adjacent fibroadipose tissue and a lymph node; material of dubious value Thyroid Thyroid 0002046 456 1038 BP-52264 DNA Extraction from Paxgene-derived Lysate Plate Based 05/01/2014 LCSET-10442 01/23/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) EXCLUDE GTEX-11LCK-0002-SM-58Q7P B1 Blood Whole Blood 0013756 -156 BP-39600 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/04/2013 LCSET-4574 01/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-11LCK-0002-SM-5DWRA B1 Blood Whole Blood 0013756 -156 BP-39600 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/04/2013 GTEx_OM25_Dec_01 01/28/2014 Illumina OMNI SNP Array OMNI GTEX-11LCK-0002-SM-6WBSW B1 Blood Whole Blood 0013756 -156 BP-39600 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/04/2013 LCSET-6056 09/21/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-11LCK-0005-SM-5O98U B1 7.2 Blood Whole Blood 0013756 -156 BP-39727 RNA isolation_PAXgene Blood RNA (Manual) 06/07/2013 LCSET-4909 03/20/2014 TruSeq.v1 RNASEQ 0.988181 1.25654e+06 0.944081 0.991929 0.770871 20045 1 76 0.00247307 196 0 9.85861e+07 0.0553599 309784 9.93883e+07 1.28536e+07 20062 4.8975e+07 0 0.17321 0.991929 0.764649 9.85861e+07 0.00429422 2.09924e+07 5.04887e+07 2.11897e+07 207 2.12386e+07 1.81128e+07 0.0033802 2.13168e+07 50.0919 0.00311691 0.995677 0 50.2339 GTEX-11LCK-0008-SM-5Q5BB B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 259 BP-40621 RNA isolation_Trizol Manual (Cell Pellet) 07/10/2013 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.9921 334131 0.977256 0.994467 0.871417 19414 1 76 0.00153505 136 0 6.05106e+07 0.0223829 210462 6.08472e+07 4.46491e+06 19424 3.01122e+07 0 0.105839 0.994467 0.866596 6.05106e+07 0.00251883 1.35135e+07 8.78481e+06 1.35707e+07 131 1.35834e+07 1.60149e+07 0.00202577 1.36501e+07 50.1223 0.00345886 0.996834 0 50.1055 GTEX-11LCK-0126-SM-5A5M5 1 B1 2 pieces, well-preserved; no abnormalities 7.5 Spleen Spleen 0002106 184 1147 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.989794 307817 0.96189 0.991921 0.761208 24669 1 76 0.00258055 204 0 8.4527e+07 0.0369358 589864 8.52155e+07 9.6535e+06 24702 4.20365e+07 0 0.200682 0.991921 0.755058 8.4527e+07 0.00436292 1.85262e+07 1.28311e+07 1.8659e+07 217 1.86652e+07 1.20272e+07 0.00346982 1.86868e+07 50.0289 0.00692203 0.994048 0 50.1785 GTEX-11LCK-0226-SM-5A5M6 1 B1 2 pieces, ~40% adherent or interstitial fat; delineated. Islets well represented/preserved; rep ones delineated 6.8 Pancreas Pancreas 0001150 188 1145 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.990033 279734 0.970462 0.992506 0.819123 21680 1 76 0.00213602 113 0 7.31735e+07 0.0293264 285701 7.37261e+07 8.93507e+06 21702 3.64187e+07 0 0.151339 0.992506 0.812984 7.31735e+07 0.00388711 1.65997e+07 1.67931e+07 1.67613e+07 133 1.67462e+07 1.76548e+07 0.00300938 1.67946e+07 50.0721 0.00387517 0.994978 0 50.2423 GTEX-11LCK-0326-SM-5A5M7 1 B1 2 pieces, pure adipose tissue, no fibrous tissue/vessels; excellent specimen 7.6 Adipose Tissue Adipose - Visceral (Omentum) 0010414 191 1143 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.991341 220831 0.977463 0.993849 0.833542 22270 1 76 0.00201904 170 0 7.26082e+07 0.0222632 546470 7.30576e+07 9.13781e+06 22286 3.6141e+07 0 0.14392 0.993849 0.828415 7.26082e+07 0.00388772 1.59677e+07 6.73019e+06 1.61664e+07 186 1.61344e+07 1.22332e+07 0.00295102 1.61695e+07 50.0544 0.00747999 0.996356 0 50.3092 GTEX-11LCK-0426-SM-5A5M8 1 B1 2 pieces, minimal congestion 9.1 Lung Lung 0008952 195 1139 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.990978 272970 0.977149 0.993271 0.805608 23624 1 76 0.00217151 205 0 8.05631e+07 0.0223441 338708 8.11089e+07 9.87507e+06 23653 4.00982e+07 0 0.17154 0.993271 0.800188 8.05631e+07 0.00385281 1.79215e+07 7.33274e+06 1.80819e+07 209 1.8116e+07 1.50659e+07 0.00301022 1.80593e+07 49.9217 0.00417597 0.995565 0 50.2228 GTEX-11LCK-0526-SM-5A5M9 1 B1 2 pieces, regressive areas, adherent fat/fibrous tags, delineated 7.5 Thyroid Thyroid 0002046 199 1136 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.98839 353940 0.965511 0.991653 0.731117 24511 1 76 0.00210845 138 0 7.59419e+07 0.0341969 255546 7.65811e+07 9.30079e+06 24557 3.77553e+07 0 0.234395 0.991653 0.725014 7.59419e+07 0.00391242 1.65393e+07 7.87777e+06 1.66896e+07 161 1.67573e+07 1.16864e+07 0.00300746 1.67018e+07 49.9172 0.00333693 0.994917 0 50.2263 GTEX-11LCK-0726-SM-5PNYC 1 B1 6 pieces, up to ~1mm adherent serosa on several sections 7.9 Blood Vessel Artery - Aorta 0001496 244 1092 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.992901 293492 0.975881 0.993527 0.839516 22648 1 76 0.00305737 278 0 1.05792e+08 0.0237218 289719 1.06481e+08 3.12364e+06 22673 5.26949e+07 0 0.136365 0.993527 0.834082 1.05792e+08 0.00345122 2.28823e+07 8.87916e+06 2.31783e+07 298 2.30619e+07 2.08944e+07 0.00325417 2.30656e+07 50.0041 0.00272084 0.994152 0 50.3212 GTEX-11LCK-0826-SM-5PNYD 1 B1 2 pieces, one section is ~50% adherent/ interstitial fat 8.3 Heart Heart - Atrial Appendage 0006631 249 1087 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.99236 233388 0.979501 0.993461 0.835441 22271 1 76 0.0030911 268 0 9.8381e+07 0.0202518 1.63915e+06 9.90285e+07 2.59938e+06 22291 4.90236e+07 0 0.14406 0.993461 0.829978 9.8381e+07 0.00349617 2.12599e+07 1.99615e+07 2.15735e+07 289 2.13054e+07 1.45146e+07 0.00329341 2.16208e+07 50.3673 0.0165523 0.994562 0 50.3662 GTEX-11LCK-0926-SM-5A5KA 1 B1 2 pieces no significant ischemic changes 7.7 Heart Heart - Left Ventricle 0006566 254 1082 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.991976 210382 0.982253 0.993925 0.848214 21147 1 76 0.00202819 268 0 8.69022e+07 0.0175283 1.542e+06 8.74334e+07 9.45458e+06 21162 4.32956e+07 0 0.134039 0.993925 0.843062 8.69022e+07 0.00370696 1.92337e+07 1.80189e+07 1.90252e+07 259 1.89968e+07 1.32569e+07 0.00286593 1.93893e+07 50.5114 0.0176363 0.995873 0 49.7275 GTEX-11LCK-1026-SM-5A5KB 0 B1 6 pieces, trace adherent dermal fat, delineated; squamous epithelium is ~45microns thick 7.8 Skin Skin - Sun Exposed (Lower leg) 0004264 259 1078 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.990473 196939 0.970213 0.993192 0.788758 23266 1 76 0.00204666 159 0 6.60664e+07 0.0295486 349246 6.65193e+07 7.93577e+06 23291 3.28776e+07 0 0.181455 0.993192 0.783388 6.60664e+07 0.00377673 1.44215e+07 7.17797e+06 1.4532e+07 150 1.45656e+07 1.15539e+07 0.00290933 1.45556e+07 49.9829 0.00525029 0.995911 0 50.1908 GTEX-11LCK-1126-SM-5A5KC 0 B1 2 pieces ~5% fibrous/fascial tissue, delineated 7 Adipose Tissue Adipose - Subcutaneous 0002190 265 1072 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.990067 294909 0.974282 0.993031 0.795635 24023 1 76 0.00209846 279 0 9.59539e+07 0.025404 510423 9.66273e+07 1.12306e+07 24055 4.77297e+07 0 0.178647 0.993031 0.79009 9.59539e+07 0.00403294 2.10576e+07 9.3558e+06 2.1258e+07 276 2.13124e+07 1.63364e+07 0.00306281 2.12709e+07 49.9513 0.00528239 0.995995 0 50.2368 GTEX-11LCK-1226-SM-5Q5AM 0 B1 2 pieces, ~5-10% interstitial fat, rep focus delineated 8.1 Muscle Muscle - Skeletal 0011907 273 1065 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.992901 174399 0.984906 0.994927 0.881535 19329 1 76 0.00170002 157 0 6.74384e+07 0.0149159 757313 6.77823e+07 4.80345e+06 19333 3.35849e+07 0 0.103371 0.994927 0.877062 6.74384e+07 0.00270612 1.48403e+07 8.78306e+06 1.49238e+07 174 1.48325e+07 1.29266e+07 0.00220205 1.50565e+07 50.3747 0.0111727 0.996952 0 50.1403 GTEX-11LCK-1326-SM-5Q5AN 0 B1 2 pieces, clean specimens, no adherent fat 7.1 Nerve Nerve - Tibial 0001323 296 1042 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.985327 209100 0.965051 0.987311 0.753464 22969 1 76 0.00210077 152 0 6.15907e+07 0.0346661 309423 6.23823e+07 4.7962e+06 23006 3.06118e+07 0 0.211587 0.987311 0.743903 6.15907e+07 0.00317697 1.35104e+07 6.45734e+06 1.361e+07 146 1.35729e+07 9.38116e+06 0.00263779 1.3669e+07 50.1764 0.00496011 0.989296 0 50.1837 GTEX-11LCK-1426-SM-5HL5R 0 B1 2 pieces, clean specimens; no adherent fat 6.7 Blood Vessel Artery - Tibial 0007610 301 1038 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.991203 237592 0.973667 0.993325 0.826229 21109 1 76 0.00206986 164 0 7.22896e+07 0.0260059 358295 7.27753e+07 8.42404e+06 21132 3.59792e+07 0 0.147439 0.993325 0.820714 7.22896e+07 0.0029833 1.55303e+07 5.86394e+06 1.56712e+07 180 1.56518e+07 1.29024e+07 0.00252561 1.56937e+07 50.0669 0.0049233 0.995447 0 50.2257 GTEX-11LCK-1526-SM-5HL64 1 B1 2 pieces all muscularis, good specimens 7.1 Esophagus Esophagus - Gastroesophageal Junction 0004550 331 1008 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.990801 207894 0.971679 0.993055 0.791832 22069 1 76 0.0021326 141 0 6.76381e+07 0.0281233 774050 6.81111e+07 7.74576e+06 22091 3.36608e+07 0 0.179847 0.993055 0.786332 6.76381e+07 0.00312079 1.46365e+07 6.79802e+06 1.47729e+07 163 1.4737e+07 9.9378e+06 0.00262557 1.48156e+07 50.133 0.0113645 0.995309 0 50.2318 GTEX-11LCK-1626-SM-5PNYB 1 B1 6 pieces, all muscularis, good specimens 7.9 Esophagus Esophagus - Muscularis 0004648 332 1008 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.990645 268986 0.973354 0.991192 0.808177 22338 1 76 0.0032651 212 0 8.6663e+07 0.0264254 887297 8.74331e+07 2.58962e+06 22360 4.31472e+07 0 0.165177 0.991192 0.801059 8.6663e+07 0.0036593 1.86769e+07 7.58447e+06 1.89212e+07 215 1.88165e+07 1.38565e+07 0.00346209 1.88316e+07 50.0201 0.0101483 0.99174 0 50.3249 GTEX-11LCK-1726-SM-5S2OQ 1 B1 6 pieces, squamous mucosa is ~0.25mm, ~10-15% total thickness 9.1 Esophagus Esophagus - Mucosa 0006920 333 1007 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.993191 279884 0.974639 0.994635 0.827393 20820 1 76 0.00184358 115 0 5.22956e+07 0.025096 144279 5.25776e+07 3.68702e+06 20830 2.60362e+07 0 0.147246 0.994635 0.822954 5.22956e+07 0.002595 1.17632e+07 8.05678e+06 1.18052e+07 120 1.17908e+07 1.07731e+07 0.00221875 1.18554e+07 50.1367 0.00274411 0.996079 0 50.0891 GTEX-11LCK-1926-SM-5A5KE 2 B1 6 pieces, lymphoid aggregates well- represented, delineated, ~10% total tissue 7.1 Small Intestine Small Intestine - Terminal Ileum 0001211 349 992 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.990654 214596 0.971712 0.992942 0.795311 23714 1 76 0.00211733 202 0 8.45528e+07 0.0280501 1.05469e+06 8.51538e+07 1.00819e+07 23739 4.20984e+07 0 0.176401 0.992942 0.789698 8.45528e+07 0.00387659 1.83712e+07 1.04911e+07 1.84209e+07 248 1.8421e+07 1.21411e+07 0.00299493 1.85438e+07 50.1661 0.0123857 0.99523 0 50.0675 GTEX-11LCK-2026-SM-5A5MA 1 B1 6 pieces, mucosa reasonably well preserved, focally approaches score '2' in a few foci; ~10% total thicknees, averaging 0.3-0.4mm 6.3 Colon Colon - Transverse 0001157 350 991 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.989581 221564 0.972679 0.992122 0.79165 23135 1 76 0.00235566 204 0 7.26117e+07 0.0267415 1.32046e+06 7.31882e+07 8.69336e+06 23162 3.61247e+07 0 0.181029 0.992122 0.785413 7.26117e+07 0.00411236 1.61766e+07 1.33235e+07 1.61196e+07 211 1.60827e+07 8.13695e+06 0.00323176 1.63781e+07 50.455 0.018042 0.994663 0 49.9117 GTEX-11LCK-2226-SM-5HL4Q 0 B1 6 pieces, prominent adherent fat up to ~2mm on one section, delineated; squamous epithelium is ~70 microns 7.5 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 364 978 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.991819 283899 0.971516 0.993821 0.772618 23511 1 76 0.00211611 188 0 7.90523e+07 0.0282624 526935 7.95438e+07 8.10911e+06 23538 3.93534e+07 0 0.198898 0.993821 0.767844 7.90523e+07 0.00303388 1.73412e+07 8.29555e+06 1.75087e+07 193 1.74772e+07 1.23153e+07 0.00257407 1.7525e+07 50.0682 0.00662446 0.995823 0 50.2403 GTEX-11LCK-2326-SM-5HL53 1 B1 2 pieces, spermatogenesis present 6.2 Testis Testis 0000473 370 972 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.990035 287153 0.917938 0.992042 0.71737 32476 1 76 0.00221597 175 0 7.767e+07 0.081775 1.08963e+06 7.8293e+07 7.96566e+06 32536 3.86765e+07 0 0.200569 0.992042 0.711661 7.767e+07 0.00299274 1.59248e+07 1.5137e+07 1.60026e+07 167 1.60363e+07 1.12698e+07 0.00260357 1.60261e+07 49.9841 0.0139173 0.99405 0 50.1218 GTEX-11LCK-2426-SM-5HL5F 0 B1 2 pieces, fibroadipose tissue, no ductal elements noted 5.8 Breast Breast - Mammary Tissue 0008367 379 963 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.990064 253562 0.971372 0.992847 0.763911 23147 1 76 0.00219053 128 0 5.95633e+07 0.0283694 269017 5.99924e+07 6.58436e+06 23175 2.96215e+07 0 0.207461 0.992847 0.758447 5.95633e+07 0.00339677 1.30748e+07 6.29267e+06 1.31866e+07 140 1.31932e+07 8.94952e+06 0.00279196 1.32255e+07 50.0611 0.00448418 0.99563 0 50.2129 GTEX-11NSD-0005-SM-5LZZ5 B1 9.1 Blood Whole Blood 0013756 141 BP-39727 RNA isolation_PAXgene Blood RNA (Manual) 06/07/2013 LCSET-4901 03/23/2014 TruSeq.v1 EXCLUDE 0.989089 495439 0.948062 0.989965 0.614429 19432 1 76 0.00367995 111 0 6.96974e+07 0.0516359 39164 7.04039e+07 4.05373e+06 19465 3.46518e+07 0 0.333633 0.989965 0.608263 6.96974e+07 0.00409928 1.51528e+07 2.06266e+07 1.51862e+07 118 1.52432e+07 9.2195e+06 0.00388943 1.51658e+07 49.8727 0.000556276 0.990841 0 50.0551 GTEX-11NSD-0008-SM-5Q5BC B1 9.8 Skin Cells - Cultured fibroblasts EFO_0002009 288 BP-40621 RNA isolation_Trizol Manual (Cell Pellet) 07/10/2013 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.99221 320571 0.972954 0.994563 0.854632 19857 1 76 0.00154654 149 0 6.11688e+07 0.0266582 179625 6.15032e+07 4.63474e+06 19870 3.04474e+07 0 0.118322 0.994563 0.849985 6.11688e+07 0.00241033 1.35752e+07 9.65318e+06 1.36521e+07 142 1.36707e+07 1.42202e+07 0.00197741 1.3701e+07 50.0553 0.00292058 0.996915 0 50.1411 GTEX-11NSD-0126-SM-5987F 1 B1 2 pieces, ~2mm colloid cyst, featurs of goiter, regressive changes 7.8 Thyroid Thyroid 0002046 82 1054 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.984254 261939 0.965469 0.989103 0.760274 23982 1 76 0.00270882 133 0 7.29049e+07 0.0342139 427936 7.37081e+07 1.64618e+07 24018 3.61951e+07 0 0.205195 0.989103 0.751989 7.29049e+07 0.00597941 1.59111e+07 8.17349e+06 1.5938e+07 149 1.60495e+07 1.17314e+07 0.0043361 1.61257e+07 50.1183 0.00580582 0.993952 0 50.0421 GTEX-11NSD-0126-SM-DLIPG 1 B1 2 pieces, ~2mm colloid cyst, featurs of goiter, regressive changes Thyroid Thyroid 0002046 82 1054 BP-49830 DNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2014 LCSET-10442 01/23/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-11NSD-0126-SM-DMZ2Z 1 B1 2 pieces, ~2mm colloid cyst, featurs of goiter, regressive changes Thyroid Thyroid 0002046 82 1054 BP-49830 DNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2014 LCSET-10532 01/29/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-11NSD-0226-SM-5A5LR 1 B1 2 pieces, well preserved; one section shows medulla (delinteated) as well as cortex, the other is cortex and ~40% adherent fat (delineated) 8.9 Adrenal Gland Adrenal Gland 0002369 84 1052 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.990948 216412 0.976136 0.993595 0.826178 22587 1 76 0.00198123 201 0 7.58173e+07 0.0234719 1.22326e+06 7.6306e+07 8.96132e+06 22608 3.7733e+07 0 0.149958 0.993595 0.820887 7.58173e+07 0.00368922 1.66448e+07 8.53776e+06 1.66896e+07 211 1.66997e+07 1.29871e+07 0.00283295 1.68138e+07 50.1702 0.0160309 0.996242 0 50.0673 GTEX-11NSD-0326-SM-5A5LS 1 B1 2 pieces, patchy congrestion, fibrin deposition 8.4 Lung Lung 0008952 84 1052 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.990742 260086 0.97344 0.993153 0.799095 23889 1 76 0.00220011 137 0 6.92746e+07 0.0261347 384117 6.97522e+07 8.01182e+06 23920 3.44744e+07 0 0.174345 0.993153 0.793623 6.92746e+07 0.00390537 1.53491e+07 6.70993e+06 1.55189e+07 164 1.55298e+07 1.19674e+07 0.00305067 1.54954e+07 49.9445 0.00550688 0.995563 0 50.275 GTEX-11NSD-0426-SM-5N9CR 1 B1 2 pieces, mild congestion 6.5 Spleen Spleen 0002106 85 1051 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.990635 235000 0.964015 0.991814 0.785905 24340 1 76 0.0033655 165 0 8.41888e+07 0.0346763 410495 8.48837e+07 4.42774e+06 24369 4.18679e+07 0 0.178111 0.991814 0.779471 8.41888e+07 0.00395565 1.85144e+07 1.10071e+07 1.86369e+07 201 1.86058e+07 1.2843e+07 0.00366023 1.86444e+07 50.0518 0.00483597 0.992992 0 50.165 GTEX-11NSD-0526-SM-5A5LT 1 B1 2 pieces, well- preserved; Islets well visualized; rep ones delineated 6.9 Pancreas Pancreas 0001150 86 1050 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.988421 350739 0.980469 0.991348 0.860242 22069 1 76 0.00213006 195 0 1.18934e+08 0.0191526 340121 1.19972e+08 1.64579e+07 22087 5.91779e+07 0 0.120227 0.991348 0.8528 1.18934e+08 0.00394294 2.75409e+07 5.39957e+07 2.79627e+07 206 2.7922e+07 3.82105e+07 0.00303383 2.79297e+07 50.0069 0.002835 0.994276 0 50.38 GTEX-11NSD-0626-SM-5A5LU 0 B1 6 pieces, trace dermal fat, delineated; squamous epithelium is ~70 microns 6.9 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 87 1049 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.989792 264952 0.969926 0.992107 0.798147 23989 1 76 0.00210847 189 0 7.38262e+07 0.0298261 860362 7.44135e+07 7.56826e+06 24015 3.67495e+07 0 0.171779 0.992107 0.791847 7.38262e+07 0.00387167 1.6119e+07 1.02956e+07 1.62447e+07 190 1.62104e+07 1.10438e+07 0.00298801 1.63137e+07 50.1589 0.0115619 0.994422 0 50.1942 GTEX-11NSD-0826-SM-5986S 1 B1 2 pieces, glandular hyperplastic pattern 7.5 Prostate Prostate 0002367 91 1045 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.9802 220553 0.964129 0.986125 0.750988 24668 1 76 0.00284284 129 0 6.61224e+07 0.035625 403065 6.70527e+07 1.49357e+07 24694 3.27886e+07 0 0.213141 0.986125 0.740568 6.61224e+07 0.0073132 1.44789e+07 7.82362e+06 1.45507e+07 140 1.46741e+07 8.93366e+06 0.00506459 1.47224e+07 50.0821 0.00601116 0.99205 0 50.1236 GTEX-11NSD-0926-SM-5N9DR 0 B1 2 pieces, fibroadipose tisue; no ductal elements noted 5.9 Breast Breast - Mammary Tissue 0008367 95 1041 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.991859 180914 0.974362 0.992717 0.824241 23122 1 76 0.00280851 168 0 7.56584e+07 0.0253834 851449 7.62135e+07 3.49742e+06 23143 3.76784e+07 0 0.15012 0.992717 0.818238 7.56584e+07 0.0033489 1.66821e+07 6.97381e+06 1.67362e+07 191 1.66388e+07 1.21908e+07 0.00307847 1.68458e+07 50.3091 0.0111719 0.993574 0 50.0808 GTEX-11NSD-1026-SM-5N9BE 1 B1 2 pieces, sprematogenesis is present 7.2 Testis Testis 0000473 97 1039 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.991413 249287 0.93136 0.992242 0.738538 32740 1 76 0.00281127 176 0 8.39223e+07 0.0683322 1.17828e+06 8.45785e+07 3.76215e+06 32797 4.18208e+07 0 0.192821 0.992242 0.732809 8.39223e+07 0.00320621 1.75076e+07 1.14788e+07 1.75567e+07 184 1.75386e+07 1.34143e+07 0.00300857 1.75863e+07 50.068 0.0139312 0.993071 0 50.07 GTEX-11NSD-1126-SM-5N9BQ 1 B1 6 pieces; squamous mucosa is ~10% thickness 10 Esophagus Esophagus - Mucosa 0006920 104 1032 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.992174 162045 0.976626 0.993088 0.832858 22203 1 76 0.00286756 170 0 8.09477e+07 0.0229842 388072 8.15111e+07 3.69848e+06 22220 4.03371e+07 0 0.143768 0.993088 0.827101 8.09477e+07 0.00334089 1.82916e+07 1.06724e+07 1.8331e+07 182 1.82925e+07 1.69168e+07 0.00310401 1.84035e+07 50.1513 0.00476097 0.994002 0 50.0538 GTEX-11NSD-1226-SM-5986Q 1 B1 6 pieces, all muscularis; focal stromal connective tissue 8.3 Esophagus Esophagus - Muscularis 0004648 105 1031 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.986639 261059 0.976025 0.990759 0.826769 22265 1 76 0.00261226 166 0 7.29426e+07 0.0236983 635513 7.3623e+07 1.68854e+07 22281 3.62455e+07 0 0.149255 0.990759 0.819129 7.29426e+07 0.00593928 1.57376e+07 7.19193e+06 1.5695e+07 166 1.57437e+07 1.24772e+07 0.00426885 1.59634e+07 50.3464 0.00863199 0.994879 0 49.9323 GTEX-11NSD-1426-SM-5HL67 1 B1 6 pieces, well- preserved mucosa is ~1mm, ~25% thickness 6.4 Stomach Stomach 0000945 114 1022 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.976084 170154 0.983679 0.978584 0.875789 20620 1 76 0.00244058 314 0 6.57642e+07 0.0150249 839773 6.72035e+07 7.53527e+06 20629 3.26804e+07 0 0.10789 0.978584 0.857033 6.57642e+07 0.00368832 1.51855e+07 1.00999e+08 1.55907e+07 217 1.55885e+07 1.84321e+07 0.00306286 1.5354e+07 49.6211 0.012496 0.981085 0 50.6583 GTEX-11NSD-1626-SM-5986U 1 B1 6 pieces, well preserved mucosa is ~0.4mm thick, ~15% thickness 8.1 Colon Colon - Transverse 0001157 128 1008 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.98514 226069 0.974037 0.989668 0.804781 23783 1 76 0.00276042 144 0 6.75983e+07 0.0255047 780222 6.83041e+07 1.50635e+07 23813 3.35654e+07 0 0.169256 0.989668 0.796466 6.75983e+07 0.00637084 1.49519e+07 8.43267e+06 1.48204e+07 153 1.48844e+07 1.03842e+07 0.00455737 1.51658e+07 50.4682 0.0114228 0.994196 0 49.7791 GTEX-11NSD-1726-SM-5N9C3 1 B1 6 pieces, unusually abundant and well preserved lymphoid aggregates are ~50% total specimen. 7.9 Small Intestine Small Intestine - Terminal Ileum 0001211 136 1000 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.991914 194812 0.964493 0.992867 0.758047 24413 1 76 0.00311044 136 0 6.9612e+07 0.0348653 322759 7.01121e+07 3.3178e+06 24443 3.46604e+07 0 0.206446 0.992867 0.75264 6.9612e+07 0.00365684 1.53457e+07 7.27537e+06 1.53945e+07 147 1.53751e+07 1.12544e+07 0.00338338 1.54306e+07 50.09 0.00460347 0.993819 0 50.0793 GTEX-11NSD-1826-SM-5N9CF 0 B1 2 pieces, good clean specimens, minimal adherent fat 7.9 Nerve Nerve - Tibial 0001323 288 848 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.990746 189986 0.96784 0.991701 0.76129 23783 1 76 0.00282003 170 0 7.58589e+07 0.0319074 224186 7.64937e+07 3.88391e+06 23813 3.77857e+07 0 0.20655 0.991701 0.754972 7.58589e+07 0.0033589 1.66978e+07 6.26109e+06 1.67947e+07 167 1.67576e+07 1.23636e+07 0.0030892 1.68063e+07 50.0725 0.00293078 0.992657 0 50.1446 GTEX-11NSD-2026-SM-5HL5U 0 B1 2 pieces, minimal interstitial fat 8.5 Muscle Muscle - Skeletal 0011907 288 848 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.992205 233647 0.982248 0.994131 0.885853 18216 1 76 0.00188384 164 0 7.04498e+07 0.0175576 1.10455e+06 7.08657e+07 8.25882e+06 18218 3.50951e+07 0 0.0963945 0.994131 0.880655 7.04498e+07 0.00280826 1.53851e+07 1.33396e+07 1.54088e+07 174 1.53663e+07 1.51893e+07 0.00234516 1.55575e+07 50.3091 0.0155866 0.996058 0 50.0385 GTEX-11NSD-2226-SM-5986V 0 B1 6 pieces, no dermal fat; squamous epithelium is ~50 microns 7.2 Skin Skin - Sun Exposed (Lower leg) 0004264 287 849 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.985215 304818 0.971754 0.989958 0.755475 24355 1 76 0.00271897 201 0 7.68027e+07 0.0280497 1.01876e+06 7.75817e+07 1.53478e+07 24378 3.81303e+07 0 0.216279 0.989958 0.747889 7.68027e+07 0.00667368 1.676e+07 9.89341e+06 1.68026e+07 166 1.69021e+07 1.14291e+07 0.00468685 1.70028e+07 50.1485 0.0131314 0.994701 0 50.0635 GTEX-11NUK-0004-SM-58Q87 B1 Blood Whole Blood 0013756 794 BP-39723 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/07/2013 LCSET-4574 01/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-11NUK-0004-SM-5DWSZ B1 Blood Whole Blood 0013756 794 BP-39723 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/07/2013 GTEx_OM25_Dec_01 01/28/2014 Illumina OMNI SNP Array OMNI GTEX-11NUK-0004-SM-6WBTU B1 Blood Whole Blood 0013756 794 BP-39723 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/07/2013 LCSET-6056 09/22/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-11NUK-0005-SM-5MR5F B1 9.1 Blood Whole Blood 0013756 794 BP-39727 RNA isolation_PAXgene Blood RNA (Manual) 06/07/2013 LCSET-4902 03/22/2014 TruSeq.v1 RNASEQ 0.970113 407640 0.978933 0.97058 0.787983 19191 1 76 0.00295761 117 0 8.9086e+07 0.0202724 145815 9.17863e+07 3.92267e+06 19208 4.44004e+07 0 0.19095 0.97058 0.7648 8.9086e+07 0.00297858 2.06546e+07 1.18724e+08 2.09941e+07 145 2.09636e+07 2.30987e+07 0.00296809 2.07176e+07 49.7049 0.00158864 0.971047 0 50.4075 GTEX-11NUK-0008-SM-5Q5B9 B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 887 BP-40621 RNA isolation_Trizol Manual (Cell Pellet) 07/10/2013 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.991672 263962 0.976715 0.994118 0.864996 20241 1 76 0.00152711 149 0 6.40996e+07 0.022911 179615 6.44788e+07 4.922e+06 20252 3.1901e+07 0 0.111719 0.994118 0.859908 6.40996e+07 0.00242995 1.43097e+07 7.72441e+06 1.4361e+07 146 1.43834e+07 1.55414e+07 0.00197742 1.44439e+07 50.1049 0.00278564 0.996564 0 50.0895 GTEX-11NUK-0011-R4a-SM-DO12B B1, A1 7.1 Brain Brain - Amygdala 0001876 864 BP-43065 RNA isolation_PAXgene Tissue miRNA 09/04/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.988422 540787 0.965471 0.992366 0.865129 23131 1 76 0.00218066 269 0 8.8895e+07 0.0341508 6.61134e+06 8.95788e+07 9.11609e+06 23141 4.41766e+07 0 0.100342 0.992366 0.858525 8.8895e+07 0.00411824 1.9329e+07 2.0175e+07 1.98351e+07 320 1.98014e+07 9.44505e+06 0.0031456 1.96543e+07 49.8135 0.0738047 0.99631 0 50.6461 GTEX-11NUK-0011-R5a-SM-DO93N B1, A1 9.2 Brain Brain - Caudate (basal ganglia) 0001873 864 BP-43065 RNA isolation_PAXgene Tissue miRNA 09/04/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.994999 680521 0.966724 0.995756 0.843561 24033 1 76 0.00177405 271 0 1.06166e+08 0.0329354 7.237e+06 1.06618e+08 6.05648e+06 24054 5.29281e+07 0 0.123163 0.995756 0.839981 1.06166e+08 0.00209668 2.31065e+07 2.62574e+07 2.35895e+07 330 2.34758e+07 1.17151e+07 0.00193524 2.32974e+07 49.8092 0.0678776 0.996513 0 50.5171 GTEX-11NUK-0011-R6a-SM-DO93O B1, A1 8.1 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 864 BP-43065 RNA isolation_PAXgene Tissue miRNA 09/04/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.994291 936316 0.96424 0.995229 0.849639 24456 1 76 0.00181477 375 0 1.07637e+08 0.0353681 7.23119e+06 1.08153e+08 6.32979e+06 24481 5.36316e+07 0 0.114601 0.995229 0.845585 1.07637e+08 0.00221159 2.34087e+07 2.20156e+07 2.39792e+07 351 2.3915e+07 1.39445e+07 0.00201299 2.35693e+07 49.636 0.0668609 0.996167 0 50.6019 GTEX-11NUK-0011-R7a-SM-DO93P B1, A1 8.2 Brain Brain - Putamen (basal ganglia) 0001874 864 BP-43065 RNA isolation_PAXgene Tissue miRNA 09/04/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.993915 783490 0.967445 0.994919 0.846977 23572 1 76 0.00179974 372 0 1.13391e+08 0.0323197 9.139e+06 1.1397e+08 6.72561e+06 23590 5.65066e+07 0 0.120468 0.994919 0.842673 1.13391e+08 0.00241755 2.46885e+07 2.99502e+07 2.51448e+07 376 2.49811e+07 1.12041e+07 0.00210833 2.49516e+07 49.9705 0.0801876 0.995923 0 50.4578 GTEX-11NUK-0126-SM-5A5L3 1 B1 6 pieces, include internal and attached adipose tissue up to 40%, squamous epithelium measures ~40 microns 7.4 Skin Skin - Sun Exposed (Lower leg) 0004264 894 887 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.990547 246264 0.969172 0.992951 0.764937 25518 1 76 0.00210355 212 0 8.56385e+07 0.0305984 623718 8.62464e+07 1.00996e+07 25558 4.26222e+07 0 0.204235 0.992951 0.759546 8.56385e+07 0.00394323 1.87802e+07 1.03176e+07 1.89259e+07 231 1.89521e+07 1.34322e+07 0.00302116 1.89408e+07 49.9851 0.00723182 0.995356 0 50.1931 GTEX-11NUK-0226-SM-5A5L4 1 B1 2 pieces 8.2 Muscle Muscle - Skeletal 0011907 895 886 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.992187 191759 0.98381 0.994361 0.875332 19183 1 76 0.00171576 198 0 7.51208e+07 0.0159713 947934 7.55467e+07 9.47973e+06 19190 3.74202e+07 0 0.108478 0.994361 0.870396 7.51208e+07 0.00346944 1.63783e+07 9.43646e+06 1.63617e+07 205 1.63378e+07 1.56973e+07 0.00259068 1.65477e+07 50.319 0.0125476 0.996536 0 49.9745 GTEX-11NUK-0326-SM-5HL5K 1 B1 2 pieces, includes portion of nerve and small fragment of skeletal muscle 5.9 Adipose Tissue Adipose - Subcutaneous 0002190 895 887 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4806,LCSET-5073 03/04/2014 TruSeq.v1 RNASEQ 0.985779 289087 0.971641 0.99072 0.761029 25368 1 76 0.00223157 217 0 1.10575e+08 0.0281309 503271 1.1161e+08 1.49526e+07 25425 5.4948e+07 0 0.210612 0.99072 0.753967 1.10575e+08 0.00316702 2.42616e+07 1.18109e+07 2.43691e+07 238 2.44346e+07 1.47399e+07 0.00269696 2.46463e+07 50.2157 0.00450918 0.99566 0 50.1106 GTEX-11NUK-0426-SM-5HL5V 1 B1 2 pieces, includes 10 and 30% attached fat 6.5 Nerve Nerve - Tibial 0001323 902 880 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.990513 236017 0.965355 0.992481 0.747576 24154 1 76 0.00212044 173 0 7.74327e+07 0.0343554 459886 7.80193e+07 8.05912e+06 24188 3.85418e+07 0 0.217779 0.992481 0.741954 7.74327e+07 0.00311415 1.69671e+07 8.00472e+06 1.71326e+07 184 1.71116e+07 1.13437e+07 0.00261631 1.71327e+07 50.0308 0.00589452 0.994449 0 50.2427 GTEX-11NUK-0526-SM-5A5L5 1 B1 2 pieces, some intimal thickening, 1.1mm attachment of fat 6 Blood Vessel Artery - Tibial 0007610 903 880 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.990884 213458 0.971527 0.993088 0.78903 21769 1 76 0.00207582 134 0 6.42719e+07 0.0281295 369151 6.47192e+07 6.95707e+06 21792 3.19808e+07 0 0.182496 0.993088 0.783577 6.42719e+07 0.0039331 1.37896e+07 5.50098e+06 1.3936e+07 146 1.39358e+07 1.07363e+07 0.0030024 1.39194e+07 49.9705 0.00570389 0.995292 0 50.264 GTEX-11NUK-0726-SM-5A5ME 0 B1 6 pieces, intimal thickening, attached adventitia with fat, nerve, and focal collection of lymphocytes 7.8 Blood Vessel Artery - Aorta 0001496 949 835 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.989722 359402 0.974228 0.99205 0.767138 23463 1 76 0.00222583 208 0 8.82214e+07 0.0252838 205464 8.89284e+07 1.05426e+07 23495 4.38677e+07 0 0.20709 0.99205 0.76104 8.82214e+07 0.00407798 1.90693e+07 7.57845e+06 1.93012e+07 205 1.93477e+07 1.53796e+07 0.00314973 1.92172e+07 49.8308 0.00231044 0.994378 0 50.3022 GTEX-11NUK-0826-SM-5HL4U 1 B1 2 pieces, includes pleura (target is 1 cm below pleura), numerous hemosiderin-laden macrophages, some congestion 7.4 Lung Lung 0008952 950 834 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.991003 244193 0.970939 0.993049 0.734825 24826 1 76 0.00241877 208 0 8.57467e+07 0.0286021 366924 8.6347e+07 9.3073e+06 24871 4.26699e+07 0 0.236114 0.993049 0.729717 8.57467e+07 0.00327646 1.89329e+07 8.85373e+06 1.90678e+07 216 1.90741e+07 1.31843e+07 0.00284673 1.90908e+07 50.022 0.00424941 0.995095 0 50.1775 GTEX-11NUK-0926-SM-5HL57 0 B1 2 pieces, one piece is ~20% fat, 2nd ~5% fat 6.3 Heart Heart - Atrial Appendage 0006631 951 833 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.988386 233438 0.976134 0.991304 0.777337 22735 1 76 0.00204422 151 0 7.05042e+07 0.0236269 1.63106e+06 7.11227e+07 8.16519e+06 22761 3.50432e+07 0 0.198796 0.991304 0.770578 7.05042e+07 0.00340385 1.54557e+07 1.03639e+07 1.54387e+07 182 1.53725e+07 9.32121e+06 0.00272204 1.57168e+07 50.5537 0.0229331 0.994223 0 49.9725 GTEX-11NUK-1026-SM-5HL5J 2 B1 1 piece; minute fragment of fat/stroma 6.6 Thyroid Thyroid 0002046 952 833 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.989893 239627 0.966308 0.992202 0.739278 24665 1 76 0.00217252 158 0 7.61627e+07 0.033403 463598 7.67612e+07 8.88998e+06 24703 3.78857e+07 0 0.227029 0.992202 0.733514 7.61627e+07 0.00312751 1.67264e+07 8.2964e+06 1.67666e+07 174 1.67751e+07 1.08855e+07 0.0026489 1.6887e+07 50.1661 0.00603948 0.994512 0 50.0601 GTEX-11NUK-1226-SM-5P9GM 1 B1 2 pieces, includes capsule (target is 1 cm below capsule), few collections of lymphocytes, often in portal tracts 6.1 Liver Liver 0001114 956 829 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4914 03/27/2014 TruSeq.v1 RNASEQ 0.990075 324658 0.971098 0.990563 0.773318 22368 1 76 0.00288176 369 0 1.05509e+08 0.0287682 1.6549e+06 1.06514e+08 3.56031e+06 22399 5.2508e+07 0 0.19778 0.990563 0.76602 1.05509e+08 0.00358178 2.28243e+07 2.18905e+07 2.33735e+07 346 2.31983e+07 1.2904e+07 0.0032316 2.30422e+07 49.8312 0.015537 0.991052 0 50.5944 GTEX-11NUK-1326-SM-5P9GN 1 B1 6 pieces, epithelium partially sloughing, some submucosal glands 6.5 Esophagus Esophagus - Mucosa 0006920 961 825 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4914 03/27/2014 TruSeq.v1 RNASEQ 0.991066 283273 0.97147 0.991523 0.806155 23218 1 76 0.00295763 269 0 9.56598e+07 0.0282897 924619 9.64777e+07 3.13525e+06 23242 4.76344e+07 0 0.165315 0.991523 0.799321 9.56598e+07 0.00366195 2.14372e+07 1.25844e+07 2.16127e+07 300 2.15416e+07 1.41466e+07 0.00330963 2.15597e+07 50.0209 0.00958376 0.99198 0 50.2038 GTEX-11NUK-1426-SM-5HL68 1 B1 6 pieces, 2 pieces include ~30% fat, vessels, and nerve 6.1 Esophagus Esophagus - Muscularis 0004648 962 824 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.988286 274056 0.967701 0.99096 0.810351 22699 1 76 0.00216 186 0 7.11141e+07 0.0321606 1.79087e+06 7.17629e+07 7.1687e+06 22717 3.53465e+07 0 0.15735 0.99096 0.803025 7.11141e+07 0.00361208 1.54854e+07 1.03272e+07 1.54925e+07 215 1.53846e+07 7.5422e+06 0.00288408 1.57741e+07 50.6249 0.0249553 0.993634 0 50.0115 GTEX-11NUK-1726-SM-5A5L2 1 B1 6 pieces, small attachment of fat and nerve 6.4 Esophagus Esophagus - Gastroesophageal Junction 0004550 973 815 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.988596 271025 0.969254 0.991315 0.820414 22370 1 76 0.00202136 263 0 8.11154e+07 0.0305743 1.94169e+06 8.18261e+07 9.04546e+06 22392 4.03409e+07 0 0.14884 0.991315 0.813289 8.11154e+07 0.00424953 1.76297e+07 9.53659e+06 1.77018e+07 257 1.7618e+07 9.59015e+06 0.00313239 1.79179e+07 50.422 0.0237295 0.994033 0 50.1019 GTEX-11NUK-2026-SM-5PNVZ 1 B1 2 pieces, central defects in 1 piece (?poor fixation) 6.1 Adipose Tissue Adipose - Visceral (Omentum) 0010414 982 807 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.990005 201824 0.974493 0.992338 0.799824 23170 1 76 0.00206585 156 0 6.71185e+07 0.0252369 666479 6.76367e+07 6.00746e+06 23189 3.33835e+07 0 0.17467 0.992338 0.793696 6.71185e+07 0.00320109 1.4724e+07 7.51262e+06 1.50106e+07 176 1.49549e+07 9.3288e+06 0.00263214 1.49305e+07 49.9592 0.0098538 0.994672 0 50.482 GTEX-11NUK-2426-SM-5BC4U 2 B1 6 pieces, mucosa and muscularis 6.1 Stomach Stomach 0000945 994 796 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.970665 261868 0.977916 0.975498 0.805208 20971 1 76 0.00304695 213 0 6.47444e+07 0.0217899 1.09654e+06 6.63706e+07 1.65649e+07 20985 3.2089e+07 0 0.172708 0.975498 0.785479 6.47444e+07 0.00562403 1.46282e+07 2.22735e+07 1.44988e+07 174 1.45359e+07 9.51496e+06 0.00432911 1.48852e+07 50.5938 0.0165215 0.980331 0 49.778 GTEX-11NUK-2626-SM-5A5MB 2 B1 1 piece, fragmented; testis 6.3 Testis Testis 0000473 1001 790 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.989184 293030 0.92172 0.991544 0.719898 32865 1 76 0.00208301 149 0 7.46096e+07 0.0779622 905064 7.52458e+07 9.08139e+06 32923 3.71343e+07 0 0.201822 0.991544 0.713811 7.46096e+07 0.00375251 1.53177e+07 1.16233e+07 1.53571e+07 159 1.53968e+07 1.11233e+07 0.00291577 1.54325e+07 50.0579 0.0120281 0.993905 0 50.0643 GTEX-11NUK-2726-SM-5A5MC 1 B1 6 pieces, up to 40% attached subcutaneous fat 7.8 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1003 789 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.988482 272087 0.973007 0.991414 0.76199 24015 1 76 0.00210992 146 0 7.01318e+07 0.0267737 418686 7.07392e+07 8.55639e+06 24043 3.48765e+07 0 0.211017 0.991414 0.755448 7.01318e+07 0.00407438 1.5393e+07 8.67438e+06 1.55355e+07 163 1.55667e+07 1.05552e+07 0.00308925 1.55542e+07 49.9799 0.00591873 0.994346 0 50.2305 GTEX-11NUK-2926-SM-5A5MD 1 B1 2 pieces 7.1 Brain Brain - Cortex 0001870 1040 752 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.991414 355721 0.96652 0.993444 0.827071 24480 1 76 0.00198431 268 0 9.07881e+07 0.0330548 3.33166e+06 9.13872e+07 1.03852e+07 24501 4.52035e+07 0 0.139449 0.993444 0.821649 9.07881e+07 0.00368022 2.00172e+07 1.39557e+07 2.00138e+07 284 1.99949e+07 1.12456e+07 0.00283053 2.02056e+07 50.2621 0.0364565 0.995475 0 49.9958 GTEX-11NUK-3026-SM-5986K 1 B1 2 pieces (fragmented) 6.9 Brain Brain - Cerebellum 0002037 1042 751 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.982714 416731 0.94665 0.988334 0.731077 23883 1 76 0.00292773 125 0 7.58743e+07 0.0529759 1.1051e+06 7.67699e+07 1.62885e+07 23906 3.76199e+07 0 0.215573 0.988334 0.722549 7.58743e+07 0.00756041 1.63623e+07 1.64162e+07 1.63701e+07 160 1.65258e+07 9.22611e+06 0.0052309 1.65938e+07 50.1026 0.014395 0.993954 0 50.0118 GTEX-11NUK-3126-SM-5986M 1 B1 2 pieces, adenohypophysis 6.4 Pituitary Pituitary 0000007 1047 746 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.981921 328847 0.959179 0.987379 0.764534 25822 1 76 0.00278368 131 0 7.41633e+07 0.0405929 716611 7.51113e+07 1.83576e+07 25860 3.67935e+07 0 0.194645 0.987379 0.754885 7.41633e+07 0.006303 1.6103e+07 1.29062e+07 1.62299e+07 164 1.63556e+07 1.01334e+07 0.00453362 1.63582e+07 50.0041 0.00954066 0.992837 0 50.1962 GTEX-11NV4-0001-SM-58Q86 B1 Blood Whole Blood 0013756 867 BP-39723 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/07/2013 LCSET-4574 01/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-11NV4-0001-SM-5DWSY B1 Blood Whole Blood 0013756 867 BP-39723 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/07/2013 GTEx_OM25_Dec_01 01/28/2014 Illumina OMNI SNP Array OMNI GTEX-11NV4-0001-SM-6WBTT B1 Blood Whole Blood 0013756 867 BP-39723 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/07/2013 LCSET-6056 09/22/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-11NV4-0005-SM-5N9EX B1 8.8 Blood Whole Blood 0013756 868 BP-39727 RNA isolation_PAXgene Blood RNA (Manual) 06/07/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.987476 1.01016e+06 0.95998 0.988986 0.717328 22672 1 76 0.00479788 211 0 1.10809e+08 0.0393499 192758 1.12043e+08 5.64536e+06 22714 5.50218e+07 0 0.242652 0.988986 0.709427 1.10809e+08 0.00486463 2.44951e+07 4.80493e+07 2.45749e+07 212 2.46119e+07 1.91433e+07 0.0048312 2.4645e+07 50.0336 0.00172039 0.990497 0 50.0813 GTEX-11NV4-0008-SM-5Q5BA B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 1459 BP-40621 RNA isolation_Trizol Manual (Cell Pellet) 07/10/2013 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.99234 410037 0.974306 0.994002 0.863844 19194 1 76 0.00160138 136 0 6.08821e+07 0.025336 203767 6.12495e+07 4.04489e+06 19202 3.03236e+07 0 0.110462 0.994002 0.858662 6.08821e+07 0.00251049 1.35553e+07 1.10651e+07 1.3608e+07 131 1.36008e+07 1.61195e+07 0.00205518 1.36744e+07 50.135 0.00332684 0.995664 0 50.0969 GTEX-11NV4-0011-R5a-SM-5NQ88 B1, A1 8.5 Brain Brain - Caudate (basal ganglia) 0001873 790 BP-42719 RNA isolation_PAXgene Tissue miRNA 08/26/2013 LCSET-4906 03/22/2014 TruSeq.v1 RNASEQ 0.991382 479872 0.957934 0.99289 0.820301 23259 1 76 0.00204992 268 0 7.59291e+07 0.0417913 5.12339e+06 7.64728e+07 6.19327e+06 23273 3.78307e+07 0 0.137632 0.99289 0.814469 7.59291e+07 0.00284001 1.63736e+07 2.6929e+07 1.66101e+07 265 1.6516e+07 7.74034e+06 0.00244436 1.65849e+07 50.1041 0.0669963 0.994399 0 50.3584 GTEX-11NV4-0011-R6a-SM-57WD5 B1, A1 6.9 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 790 BP-42719 RNA isolation_PAXgene Tissue miRNA 08/26/2013 LCSET-4415 12/21/2013 TruSeq.v1 RNASEQ 0.990174 617159 0.961019 0.993122 0.847664 23344 1 76 0.00196695 269 0 8.39022e+07 0.0385987 5.42477e+06 8.44833e+07 1.03214e+07 23362 4.17327e+07 0 0.113355 0.993122 0.841833 8.39022e+07 0.00391745 1.84114e+07 2.22882e+07 1.83582e+07 301 1.83336e+07 1.02345e+07 0.0029393 1.8656e+07 50.4358 0.0642112 0.99607 0 49.9277 GTEX-11NV4-0011-R7a-SM-57WDH B1, A1 7.5 Brain Brain - Putamen (basal ganglia) 0001874 790 BP-42719 RNA isolation_PAXgene Tissue miRNA 08/26/2013 LCSET-4415 12/21/2013 TruSeq.v1 RNASEQ 0.990919 578898 0.957086 0.993217 0.835847 22923 1 76 0.00199165 267 0 7.19695e+07 0.0426321 4.64879e+06 7.24611e+07 8.99946e+06 22935 3.58243e+07 0 0.121238 0.993217 0.830178 7.19695e+07 0.00364498 1.5706e+07 2.08641e+07 1.57519e+07 257 1.56556e+07 7.50402e+06 0.0028164 1.59495e+07 50.4649 0.0641557 0.995515 0 50.0729 GTEX-11NV4-0326-SM-5HL58 1 B1 2 pieces, minimal internal fat 7.5 Muscle Muscle - Skeletal 0011907 1020 727 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.992678 276255 0.979877 0.994568 0.877647 19371 1 76 0.0018497 268 0 9.07219e+07 0.0198631 1.11672e+06 9.12174e+07 9.77122e+06 19379 4.51922e+07 0 0.10223 0.994568 0.87288 9.07219e+07 0.00277986 1.93405e+07 2.10064e+07 1.9661e+07 264 1.95029e+07 1.89221e+07 0.0023139 1.96566e+07 50.1963 0.0122424 0.996459 0 50.4109 GTEX-11NV4-0526-SM-5N9BF 1 B1 2 pieces, excellent specimen, some intimal thickening and small focus of medial calcification 8 Blood Vessel Artery - Tibial 0007610 1039 709 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.993425 126110 0.976389 0.994141 0.849611 20932 1 76 0.00270743 167 0 8.04995e+07 0.0231565 370046 8.09739e+07 3.51526e+06 20944 4.01038e+07 0 0.126779 0.994141 0.844633 8.04995e+07 0.00319668 1.71838e+07 5.98075e+06 1.72837e+07 190 1.72132e+07 1.65195e+07 0.00295188 1.73126e+07 50.144 0.00456994 0.994858 0 50.1449 GTEX-11NV4-0626-SM-5N9BR 2 B1 2 pieces, Hashimoto's thyroiditis with atypical lymphoid infiltrate 6.1 Thyroid Thyroid 0002046 1097 652 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.987115 337185 0.954308 0.987731 0.708674 25820 1 76 0.00371823 159 0 8.17488e+07 0.043807 233778 8.27642e+07 3.86082e+06 25868 4.06047e+07 0 0.245634 0.987731 0.69998 8.17488e+07 0.00422291 1.78977e+07 1.97983e+07 1.79471e+07 172 1.79093e+07 1.04089e+07 0.00397041 1.79969e+07 50.122 0.00282463 0.988347 0 50.0689 GTEX-11NV4-0826-SM-5BC4S 1 B1 2 pieces, 1 piece is 60% fat 6.7 Heart Heart - Atrial Appendage 0006631 1121 630 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.98716 300157 0.973541 0.991756 0.81218 23063 1 76 0.00269315 157 0 7.8444e+07 0.0262075 2.5674e+06 7.90961e+07 2.17527e+07 23086 3.89446e+07 0 0.161361 0.991756 0.805484 7.8444e+07 0.00523354 1.69846e+07 1.04121e+07 1.69801e+07 199 1.70443e+07 1.15178e+07 0.00395745 1.72453e+07 50.2931 0.0324593 0.996351 0 49.9932 GTEX-11NV4-1126-SM-5HL6J 1 B1 2 pieces 7.1 Lung Lung 0008952 1135 618 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.990283 210347 0.971478 0.99255 0.782477 22150 1 76 0.00261204 143 0 6.69273e+07 0.0279974 270587 6.74296e+07 7.07219e+06 22171 3.32743e+07 0 0.189002 0.99255 0.776647 6.69273e+07 0.00368918 1.46996e+07 1.06147e+07 1.47888e+07 157 1.47702e+07 1.05543e+07 0.00314938 1.48664e+07 50.1622 0.00401288 0.994817 0 50.1511 GTEX-11NV4-1326-SM-5HL6V 1 B1 2 pieces, includes capsule (target is 1 cm below capsule), micro and macrovesicular steatosis 5.9 Liver Liver 0001114 1152 602 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.98977 657678 0.948985 0.991899 0.776741 22472 1 76 0.00219751 267 0 9.3782e+07 0.0508604 2.91383e+06 9.45479e+07 1.04418e+07 22495 4.66826e+07 0 0.172245 0.991899 0.770449 9.3782e+07 0.00314901 2.00372e+07 3.87701e+07 2.03187e+07 320 2.02379e+07 1.06584e+07 0.00267224 2.03094e+07 50.0882 0.0308186 0.994029 0 50.3487 GTEX-11NV4-1426-SM-5BC4W 0 B1 2 pieces 6.7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 1157 598 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.986335 250932 0.970963 0.99042 0.76317 23163 1 76 0.0029084 131 0 5.76459e+07 0.0287135 280060 5.82035e+07 1.36543e+07 23185 2.86006e+07 0 0.207793 0.99042 0.755858 5.76459e+07 0.00535846 1.25757e+07 7.25219e+06 1.27677e+07 136 1.28004e+07 8.78787e+06 0.00412838 1.27696e+07 49.9399 0.00481174 0.994503 0 50.3789 GTEX-11NV4-1726-SM-5N9FC 2 B1 2 pieces, spermatogenesis is present 5.7 Testis Testis 0000473 1175 583 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.987813 387065 0.914713 0.989322 0.706996 33805 1 76 0.00405283 183 0 9.00534e+07 0.0849252 689252 9.10254e+07 4.75933e+06 33869 4.47782e+07 0 0.207717 0.989322 0.699446 9.00534e+07 0.00400913 1.81804e+07 1.50684e+07 1.82498e+07 170 1.82801e+07 1.46256e+07 0.00403102 1.8276e+07 49.9944 0.00757208 0.99083 0 50.0954 GTEX-11NV4-1926-SM-5N9D4 1 B1 4 pieces, excellent specimen with small portion of fat/stroma 8.2 Salivary Gland Minor Salivary Gland 0006330 1191 569 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.989032 164469 0.972758 0.990257 0.789045 23156 1 76 0.00315218 167 0 6.86613e+07 0.0255722 131188 6.93368e+07 3.17967e+06 23184 3.41492e+07 0 0.183712 0.990257 0.781358 6.86613e+07 0.00356823 1.56253e+07 1.53226e+07 1.57273e+07 157 1.57221e+07 1.18699e+07 0.00335995 1.57125e+07 49.9849 0.00189204 0.991482 0 50.1627 GTEX-11NV4-2026-SM-5N9DG 0 B1 2 pieces, ~10% fibrous 5.8 Breast Breast - Mammary Tissue 0008367 1198 563 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.990878 161423 0.975598 0.991866 0.784888 23512 1 76 0.00307119 172 0 7.77181e+07 0.0240163 464741 7.83554e+07 3.92004e+06 23539 3.86798e+07 0 0.19071 0.991866 0.778504 7.77181e+07 0.00361038 1.71697e+07 7.96772e+06 1.72138e+07 182 1.71653e+07 1.25161e+07 0.00334052 1.72926e+07 50.1847 0.00593119 0.992854 0 50.0642 GTEX-11NV4-2126-SM-5N9DS 1 B1 2 pieces 5.8 Brain Brain - Cortex 0001870 1269 492 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.993147 211152 0.971355 0.994113 0.855738 21574 1 76 0.00269134 198 0 6.56795e+07 0.0282989 4.31810e+06 6.60685e+07 2.97521e+06 21585 3.27206e+07 0 0.115617 0.994113 0.850701 6.56795e+07 0.00317788 1.43505e+07 1.92889e+07 1.45056e+07 215 1.43261e+07 6.85852e+06 0.00293437 1.45796e+07 50.4384 0.065358 0.99508 0 50.2687 GTEX-11NV4-2226-SM-5BC4T 1 B1 2 pieces, attached portion of meninges 6.9 Brain Brain - Cerebellum 0002037 1269 500 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.983969 414838 0.947288 0.989235 0.710741 23267 1 76 0.002991 124 0 6.41872e+07 0.0523906 963362 6.48857e+07 1.69296e+07 23286 3.18056e+07 0 0.236547 0.989235 0.70309 6.41872e+07 0.0058996 1.37755e+07 8.42188e+06 1.39435e+07 145 1.40443e+07 7.65545e+06 0.00443756 1.39847e+07 49.8937 0.0148471 0.994501 0 50.303 GTEX-11NV4-2326-SM-5BC4X 1 B1 2 pieces, adenophypophysis 6.8 Pituitary Pituitary 0000007 1272 497 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.986144 337980 0.959232 0.990718 0.77487 25406 1 76 0.00286548 150 0 7.41225e+07 0.0405252 450207 7.48169e+07 2.119e+07 25441 3.67892e+07 0 0.184362 0.990718 0.767678 7.41225e+07 0.00530892 1.55277e+07 9.83908e+06 1.57614e+07 166 1.58428e+07 1.14061e+07 0.00408156 1.5762e+07 49.8721 0.00601745 0.995293 0 50.3734 GTEX-11O72-0006-SM-5O9DB C1 7.1 Blood Whole Blood 0013756 867 BP-39787 RNA isolation_PAXgene Blood RNA (Manual) 06/11/2013 LCSET-4910 04/01/2014 TruSeq.v1 RNASEQ 0.971684 671300 0.976595 0.974832 0.793332 18925 1 76 0.00408774 153 0 1.14881e+08 0.022533 479008 1.17846e+08 5.14552e+06 18935 5.70166e+07 0 0.183263 0.974832 0.773366 1.14881e+08 0.00560427 2.60163e+07 1.29435e+08 2.67014e+07 179 2.67324e+07 2.68804e+07 0.00484356 2.63717e+07 49.6604 0.00406468 0.97798 0 50.6497 GTEX-11O72-0008-SM-5Q5DN C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 923 BP-40621 RNA isolation_Trizol Manual (Cell Pellet) 07/10/2013 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.993056 292744 0.9798 0.995108 0.871523 20270 1 76 0.00182943 179 0 8.33366e+07 0.0198727 305596 8.37463e+07 1.1584e+07 20279 4.15079e+07 0 0.108277 0.995108 0.867259 8.33366e+07 0.0030568 1.86428e+07 1.14372e+07 1.87464e+07 190 1.87597e+07 2.21301e+07 0.00244185 1.8801e+07 50.055 0.00364907 0.997161 0 50.1386 GTEX-11O72-0011-R5a-SM-DO922 C1, A1 8.6 Brain Brain - Caudate (basal ganglia) 0001873 867 BP-43065 RNA isolation_PAXgene Tissue miRNA 09/04/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.994516 743255 0.966611 0.995251 0.837875 23908 1 76 0.00224458 372 0 1.14756e+08 0.0331467 1.06635e+07 1.15303e+08 5.71255e+06 23926 5.72273e+07 0 0.128735 0.995251 0.833896 1.14756e+08 0.00249311 2.47659e+07 3.69198e+07 2.54682e+07 337 2.53271e+07 1.08876e+07 0.00236875 2.49861e+07 49.6612 0.092482 0.995986 0 50.699 GTEX-11O72-0011-R6a-SM-DNZZQ C1, A1 8.2 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 867 BP-43065 RNA isolation_PAXgene Tissue miRNA 09/04/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.987778 795142 0.961764 0.991757 0.840652 24261 1 76 0.0027773 372 0 1.16076e+08 0.0380398 1.15818e+07 1.1704e+08 1.1597e+07 24283 5.76707e+07 0 0.121111 0.991757 0.833723 1.16076e+08 0.00475509 2.50129e+07 3.20154e+07 2.56548e+07 335 2.56546e+07 1.001e+07 0.00376223 2.53955e+07 49.7462 0.0989558 0.995735 0 50.6334 GTEX-11O72-0126-SM-59887 0 C1 6 pieces; well; trimmed; contains 10% internal fat 7.5 Skin Skin - Sun Exposed (Lower leg) 0004264 922 983 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.986575 245139 0.975661 0.990244 0.795294 24024 1 76 0.00278101 158 0 7.35442e+07 0.0240372 331860 7.42687e+07 1.49753e+07 24046 3.65498e+07 0 0.180367 0.990244 0.787535 7.35442e+07 0.00607656 1.61136e+07 9.27752e+06 1.61439e+07 156 1.62201e+07 1.31603e+07 0.00442268 1.62928e+07 50.1118 0.00446837 0.993914 0 50.0469 GTEX-11O72-0226-SM-59869 0 C1 2 pieces; 1 piece is 60% fibrous, also contains a sweat gland (annotated); other has 10% fibrous tissue 6.4 Adipose Tissue Adipose - Subcutaneous 0002190 925 981 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.985041 210311 0.977546 0.989458 0.801832 22446 1 76 0.00286136 130 0 6.76959e+07 0.0221238 433293 6.84172e+07 1.44086e+07 22461 3.36186e+07 0 0.175714 0.989458 0.793379 6.76959e+07 0.00649273 1.50359e+07 8.28964e+06 1.49855e+07 147 1.50692e+07 1.13354e+07 0.00466894 1.52293e+07 50.2642 0.0063331 0.993875 0 49.9161 GTEX-11O72-0326-SM-5986D 1 C1 2 pieces; each has 30% internal fat 7.7 Muscle Muscle - Skeletal 0011907 946 961 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.986766 268239 0.978917 0.991052 0.835102 20827 1 76 0.00251449 161 0 7.70792e+07 0.0208395 731026 7.77752e+07 1.62382e+07 20846 3.83005e+07 0 0.143814 0.991052 0.82763 7.70792e+07 0.00624142 1.68968e+07 8.22397e+06 1.68526e+07 165 1.6952e+07 1.57292e+07 0.00436989 1.71029e+07 50.2216 0.00939922 0.995337 0 49.9346 GTEX-11O72-0426-SM-5BC5B 1 C1 2 pieces; well trimmed 6.9 Blood Vessel Artery - Tibial 0007610 950 957 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.986164 301276 0.977423 0.990689 0.791267 21165 1 76 0.00277512 154 0 7.71398e+07 0.0222389 537382 7.78648e+07 1.97889e+07 21182 3.82748e+07 0 0.186156 0.990689 0.783899 7.71398e+07 0.00513639 1.66808e+07 8.32285e+06 1.6846e+07 166 1.69004e+07 1.35742e+07 0.00395036 1.69618e+07 50.0906 0.00690148 0.995214 0 50.2463 GTEX-11O72-0526-SM-5Q5AO 0 C1 2 pieces; 1 has 40% internal & external fat; other has 10% internal & external fat 7.2 Nerve Nerve - Tibial 0001323 959 949 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.989102 221945 0.973256 0.991203 0.74938 22361 1 76 0.00197813 126 0 5.69421e+07 0.0264463 116571 5.74474e+07 4.09975e+06 22379 2.83082e+07 0 0.223876 0.991203 0.742788 5.69421e+07 0.0031896 1.25184e+07 5.32184e+06 1.26268e+07 130 1.26115e+07 9.45908e+06 0.00258258 1.26541e+07 50.0843 0.00202918 0.993305 0 50.2157 GTEX-11O72-0626-SM-5PNYE 1 C1 6 pieces; well; trimmed; contains 10% internal fat 7.7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 969 941 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.991385 276502 0.976873 0.992054 0.787379 24102 1 76 0.00327624 217 0 9.12427e+07 0.0228847 491557 9.19735e+07 2.619e+06 24129 4.54311e+07 0 0.189494 0.992054 0.781123 9.12427e+07 0.00385265 2.0211e+07 9.61878e+06 2.03763e+07 208 2.03028e+07 1.55036e+07 0.00356425 2.03502e+07 50.0583 0.00534455 0.992723 0 50.2037 GTEX-11O72-0726-SM-5P9GO 1 C1 2 pieces; spermatogenesis 6.1 Testis Testis 0000473 973 937 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4914 03/27/2014 TruSeq.v1 RNASEQ 0.99122 323236 0.929329 0.991554 0.71401 34615 1 76 0.00310867 288 0 1.26653e+08 0.0703494 1.5222e+06 1.27732e+08 4.0828e+06 34698 6.3089e+07 0 0.215319 0.991554 0.70798 1.26653e+08 0.0036066 2.63585e+07 1.82357e+07 2.65149e+07 300 2.64911e+07 1.92005e+07 0.00335755 2.64238e+07 49.9364 0.0119171 0.991889 0 50.1479 GTEX-11O72-1026-SM-5986B 0 C1 2 pieces; 1 has 10% fat, other is 90% external fat; 6.2 Heart Heart - Atrial Appendage 0006631 983 929 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.985631 204948 0.978948 0.990742 0.843564 20606 1 76 0.00286013 123 0 6.21803e+07 0.0204026 1.96380e+06 6.27613e+07 1.26463e+07 20616 3.08568e+07 0 0.135384 0.990742 0.835754 6.21803e+07 0.0070972 1.34552e+07 7.84956e+06 1.32603e+07 146 1.33231e+07 9.15627e+06 0.00496773 1.36721e+07 50.6464 0.0312901 0.995854 0 49.6352 GTEX-11O72-1126-SM-5N9E2 0 C1 2 pieces; 1 has patchy fibrous scars (annotated) <10% & internal fat 10% 5.7 Heart Heart - Left Ventricle 0006566 985 928 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.988825 347726 0.982858 0.990673 0.827818 21787 1 76 0.00439166 368 0 1.08132e+08 0.0170036 8.04733e+06 1.0915e+08 5.46834e+06 21803 5.37597e+07 0 0.155041 0.990673 0.820097 1.08132e+08 0.00455504 2.40343e+07 2.37945e+07 2.42055e+07 340 2.42053e+07 1.02583e+07 0.0044732 2.42144e+07 50.0094 0.0737269 0.992522 0 50.1774 GTEX-11O72-1326-SM-5BC5A 2 C1 2 pieces; patchy alveolar hemorrhage, 20% 5.8 Lung Lung 0008952 988 926 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.98264 294931 0.977491 0.988185 0.757336 23206 1 76 0.00300447 145 0 7.46103e+07 0.0221399 301904 7.55024e+07 2.21059e+07 23236 3.69551e+07 0 0.220155 0.988185 0.748388 7.46103e+07 0.00567507 1.64011e+07 9.99996e+06 1.66269e+07 161 1.67362e+07 1.17788e+07 0.00433228 1.66921e+07 49.9341 0.0039986 0.99373 0 50.3418 GTEX-11O72-1726-SM-DLIP2 2 C1 6 pieces; no sign of chronic disease Kidney Kidney - Cortex 0001225 994 922 BP-51581 DNA Extraction from Paxgene-derived Lysate Plate Based 04/15/2014 LCSET-10442 01/23/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-11O72-1726-SM-DMZ2Y 2 C1 6 pieces; no sign of chronic disease Kidney Kidney - Cortex 0001225 994 922 BP-51581 DNA Extraction from Paxgene-derived Lysate Plate Based 04/15/2014 LCSET-10532 01/29/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-11O72-1926-SM-5PNW1 1 C1 6 pieces; prominent (30 & 20%) submucosal fibrous tissue in 2 of 6 pieces (annotated) 6.2 Esophagus Esophagus - Muscularis 0004648 997 920 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.989849 132731 0.972996 0.991954 0.786799 22557 1 76 0.00217209 132 0 6.5521e+07 0.0267774 1.49665e+06 6.60525e+07 5.85411e+06 22574 3.26062e+07 0 0.186197 0.991954 0.780469 6.5521e+07 0.00326501 1.42885e+07 5.81805e+06 1.4423e+07 161 1.43866e+07 8.94851e+06 0.00271739 1.44585e+07 50.1247 0.0226585 0.99406 0 50.2343 GTEX-11O72-2026-SM-5N9G8 1 C1 6 pieces; prominent (20 & 25%) submucosal fibrous tissue in 2 of 6 pieces (annotated) 5.7 Esophagus Esophagus - Gastroesophageal Junction 0004550 999 918 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.987211 278820 0.969581 0.988161 0.773305 23752 1 76 0.00420046 203 0 9.01478e+07 0.0302167 1.96667e+06 9.12279e+07 4.60709e+06 23785 4.47487e+07 0 0.196275 0.988161 0.76415 9.01478e+07 0.00435346 1.97876e+07 8.38454e+06 1.98448e+07 227 1.97674e+07 1.17307e+07 0.00427689 1.99524e+07 50.2328 0.0215578 0.98911 0 50.0721 GTEX-11O72-2126-SM-5N9FO 1 C1 2 pieces; no mammary ducts, just fibroadipose tissue 5.7 Breast Breast - Mammary Tissue 0008367 1000 918 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.986829 315530 0.975514 0.988102 0.800283 23589 1 76 0.00424147 206 0 9.05155e+07 0.024177 635203 9.16054e+07 4.55771e+06 23616 4.49442e+07 0 0.175231 0.988102 0.790761 9.05155e+07 0.0044319 1.9965e+07 1.01927e+07 2.00456e+07 222 1.99977e+07 1.36836e+07 0.00433656 2.01279e+07 50.1622 0.00693412 0.989375 0 50.1008 GTEX-11O72-2226-SM-5PNW2 3 C1 6 pieces; mucosa is totally autolyzed, but muscularis is OK (1) as is mucosal lymphoid tissue 6.3 Colon Colon - Transverse 0001157 1001 918 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.988678 193401 0.971081 0.990759 0.802276 23249 1 76 0.00231275 138 0 6.65733e+07 0.027946 747654 6.71943e+07 6.20032e+06 23271 3.30941e+07 0 0.168805 0.990759 0.794862 6.65733e+07 0.00345529 1.44624e+07 6.97044e+06 1.46018e+07 162 1.45645e+07 1.03293e+07 0.00288282 1.46371e+07 50.1244 0.0111268 0.99284 0 50.2398 GTEX-11O72-2326-SM-5BC7H 2 C1 2 pieces 7.1 Thyroid Thyroid 0002046 1004 915 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.988823 340714 0.974645 0.992085 0.817953 23932 1 76 0.00262627 196 0 8.85876e+07 0.0249763 221640 8.92943e+07 2.12969e+07 23951 4.4012e+07 0 0.156692 0.992085 0.811479 8.85876e+07 0.00486481 1.94526e+07 1.0707e+07 1.96482e+07 206 1.96928e+07 1.6604e+07 0.00374186 1.9689e+07 49.9951 0.00248213 0.995348 0 50.2501 GTEX-11O72-2726-SM-5HL6K 3 C1 2 pieces; glands autolyzed, stroma preserved 6.1 Prostate Prostate 0002367 1012 909 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.988822 259435 0.969196 0.991697 0.744924 24576 1 76 0.00231107 151 0 7.21463e+07 0.0305014 1.11149e+06 7.27503e+07 7.69638e+06 24606 3.58489e+07 0 0.224272 0.991697 0.73874 7.21463e+07 0.00366043 1.58582e+07 8.5805e+06 1.59997e+07 168 1.59989e+07 1.00888e+07 0.00298379 1.60663e+07 50.1052 0.0152781 0.994573 0 50.2221 GTEX-11O72-2826-SM-5HL6W 1 C1 4 pieces 7.5 Brain Brain - Cerebellum 0002037 1037 885 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.988535 474769 0.937372 0.991125 0.683466 23971 1 76 0.0025419 155 0 7.97497e+07 0.0622385 960104 8.04638e+07 9.7683e+06 24007 3.96495e+07 0 0.253906 0.991125 0.6774 7.97497e+07 0.00349108 1.69821e+07 2.11457e+07 1.71823e+07 176 1.72422e+07 9.46796e+06 0.00301525 1.71148e+07 49.8146 0.0119321 0.993715 0 50.2929 GTEX-11O72-2926-SM-5BC4V 2 C1 4 pieces; congested meninges on 2 pieces 6.3 Brain Brain - Cortex 0001870 1039 883 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.984495 303586 0.967854 0.990035 0.827634 23139 1 76 0.00309063 197 0 7.16667e+07 0.0319614 4.88881e+06 7.23881e+07 2.06864e+07 23153 3.55452e+07 0 0.14022 0.990035 0.819387 7.16667e+07 0.00577283 1.57438e+07 1.36421e+07 1.57195e+07 220 1.56764e+07 5.52224e+06 0.00442423 1.61342e+07 50.7196 0.0675361 0.995574 0 49.9612 GTEX-11O72-3026-SM-5986R 2 C1 1 piece, anterior 7.2 Pituitary Pituitary 0000007 1039 883 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.985863 303870 0.970429 0.990478 0.791138 24204 1 76 0.00264936 135 0 7.28471e+07 0.0292381 220847 7.35474e+07 1.67289e+07 24228 3.61675e+07 0 0.179291 0.990478 0.783605 7.28471e+07 0.00630537 1.5765e+07 1.53042e+07 1.577e+07 146 1.58914e+07 1.29519e+07 0.00446885 1.59625e+07 50.1115 0.00300278 0.995092 0 50.008 GTEX-11OC5-0004-SM-5S2O6 B1 9.9 Blood Cells - EBV-transformed lymphocytes EFO_0000572 1171 BP-45438 RNA isolation_Trizol Manual (Cell Pellet) 11/04/2013 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.99368 698335 0.962269 0.995092 0.839578 19062 1 76 0.0016659 144 0 6.03365e+07 0.0371808 557255 6.06342e+07 4.11355e+06 19075 3.0047e+07 0 0.12269 0.995092 0.835457 6.03365e+07 0.00237279 1.32199e+07 1.32366e+07 1.34062e+07 144 1.33418e+07 1.31212e+07 0.00201884 1.338e+07 50.0715 0.00919045 0.996503 0 50.3498 GTEX-11OC5-0006-SM-5N9FA B1 8.8 Blood Whole Blood 0013756 1171 BP-39787 RNA isolation_PAXgene Blood RNA (Manual) 06/11/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.986464 939841 0.958442 0.988185 0.738016 20823 1 76 0.00415082 150 0 9.36644e+07 0.0412146 138707 9.47843e+07 4.48036e+06 20854 4.65472e+07 0 0.220427 0.988185 0.729296 9.36644e+07 0.00430178 2.05965e+07 4.92197e+07 2.07595e+07 167 2.07859e+07 1.7062e+07 0.00422617 2.07444e+07 49.9501 0.0014634 0.989905 0 50.1971 GTEX-11OC5-0008-SM-5S2OH B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 1272 BP-45530 RNA isolation_Trizol Manual (Cell Pellet) 11/06/2013 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.992988 547966 0.970165 0.99497 0.84262 19731 1 76 0.00147401 148 0 6.81245e+07 0.0294988 252617 6.84689e+07 4.88675e+06 19744 3.39165e+07 0 0.127546 0.99497 0.838381 6.81245e+07 0.00221662 1.50482e+07 1.34255e+07 1.51628e+07 148 1.51486e+07 1.64026e+07 0.00184458 1.52093e+07 50.1 0.00368951 0.996951 0 50.1897 GTEX-11OC5-0126-SM-5HL6A 0 B1 6 pieces, no significant dermal fat; squamous epithelium is ~30 microns 6.5 Skin Skin - Sun Exposed (Lower leg) 0004264 1272 914 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.992082 243409 0.966483 0.993955 0.793353 23111 1 76 0.00208519 149 0 6.28834e+07 0.0333629 621103 6.32659e+07 6.69968e+06 23132 3.13138e+07 0 0.17313 0.993955 0.788557 6.28834e+07 0.00305797 1.37326e+07 1.00043e+07 1.3859e+07 153 1.38069e+07 9.5828e+06 0.00257066 1.38972e+07 50.1629 0.00981734 0.995827 0 50.2291 GTEX-11OC5-0326-SM-5PNW5 0 B1 2 pieces, ~10% interstitial fat, rep. delineated 9 Muscle Muscle - Skeletal 0011907 1278 910 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.99232 222027 0.980551 0.994242 0.871475 19513 1 76 0.00180016 208 0 8.23865e+07 0.0192168 676317 8.28636e+07 7.54976e+06 19525 4.104e+07 0 0.109076 0.994242 0.866457 8.23865e+07 0.00276684 1.77525e+07 1.18807e+07 1.78644e+07 234 1.78404e+07 1.73685e+07 0.00228257 1.79079e+07 50.0945 0.00816181 0.996164 0 50.157 GTEX-11OC5-0426-SM-5Q5AR 0 B1 2 pieces, clean specimens, minute adherent ~0.5mm nubbin fascial nubbin on one, delineated 7 Blood Vessel Artery - Tibial 0007610 1283 906 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.99163 167400 0.973499 0.993254 0.855078 19953 1 76 0.00170274 156 0 6.85437e+07 0.0261505 318891 6.90092e+07 4.95569e+06 19960 3.41167e+07 0 0.118421 0.993254 0.84931 6.85437e+07 0.00269484 1.46593e+07 6.20169e+06 1.46817e+07 166 1.46083e+07 1.37072e+07 0.00219798 1.48424e+07 50.3975 0.00462099 0.994879 0 50.0383 GTEX-11OC5-0526-SM-5N9EE 0 B1 2 pieces, generally clean specimens; partial ~0.2mm rim of fat on one, delineated 5.7 Nerve Nerve - Tibial 0001323 1285 903 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.98729 334591 0.964737 0.988658 0.762998 24801 1 76 0.00398142 222 0 9.56156e+07 0.0350413 626989 9.67125e+07 4.72766e+06 24842 4.74837e+07 0 0.201738 0.988658 0.754345 9.56156e+07 0.00418165 2.09675e+07 9.26843e+06 2.10807e+07 246 2.10014e+07 1.31281e+07 0.00408139 2.1175e+07 50.2057 0.00648302 0.990027 0 50.1347 GTEX-11OC5-0526-SM-EZ6XW 0 B1 2 pieces, generally clean specimens; partial ~0.2mm rim of fat on one, delineated Nerve Nerve - Tibial 0001323 1285 903 BP-83108 DNA Extraction from Paxgene-derived Lysate Plate Based 02/07/2017 LCSET-11114 06/09/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-11OC5-0626-SM-5HL6M 1 B1 2 pieces, no abnormalities; Purkinje cells look good 6.8 Brain Brain - Cerebellum 0002037 1426 764 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.989607 347236 0.95346 0.991811 0.729379 22703 1 76 0.00225674 129 0 6.45057e+07 0.0461895 884434 6.50382e+07 7.01445e+06 22724 3.20846e+07 0 0.224081 0.991811 0.723406 6.45057e+07 0.00330774 1.40727e+07 1.28932e+07 1.41957e+07 147 1.42139e+07 8.13499e+06 0.00278107 1.41857e+07 49.9504 0.0135987 0.994016 0 50.2177 GTEX-11OC5-0726-SM-5P9JK 1 B1 2 pieces, no abnormalities 6 Brain Brain - Cortex 0001870 1425 765 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4916 03/27/2014 TruSeq.v1 RNASEQ 0.990095 1.0199e+06 0.937492 0.990675 0.810032 24004 1 76 0.0032857 274 0 9.86332e+07 0.0621085 6.93634e+06 9.95616e+07 3.30792e+06 24027 4.91261e+07 0 0.12746 0.990675 0.802479 9.86332e+07 0.00370077 2.11479e+07 4.90098e+07 2.16019e+07 312 2.1463e+07 1.3117e+07 0.00349311 2.13539e+07 49.8726 0.0696688 0.991256 0 50.531 GTEX-11OF3-0006-SM-5O9CM B1 7.2 Blood Whole Blood 0013756 665 BP-39923 RNA isolation_PAXgene Blood RNA (Manual) 06/14/2013 LCSET-4910 04/01/2014 TruSeq.v1 RNASEQ 0.94944 343403 0.986383 0.95191 0.814672 19095 1 76 0.00383628 187 0 1.31927e+08 0.0125336 506489 1.38591e+08 5.72391e+06 19099 6.55759e+07 0 0.17171 0.95191 0.775495 1.31927e+08 0.00528127 3.11452e+07 2.15791e+08 3.15882e+07 215 3.16173e+07 3.56475e+07 0.0045569 3.14773e+07 49.8891 0.00365455 0.95438 0 50.353 GTEX-11OF3-0008-SM-5S2NH B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 887 BP-45530 RNA isolation_Trizol Manual (Cell Pellet) 11/06/2013 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.994078 373140 0.974634 0.995582 0.878659 18656 1 76 0.00148705 147 0 6.21257e+07 0.0251783 303712 6.24014e+07 4.28203e+06 18662 3.0939e+07 0 0.0959745 0.995582 0.874777 6.21257e+07 0.00227982 1.3709e+07 1.02602e+07 1.38728e+07 157 1.37969e+07 1.35809e+07 0.00188283 1.38875e+07 50.1637 0.00486707 0.997086 0 50.297 GTEX-11OF3-0011-R11a-SM-57WCR B1, A1 8.2 Brain Brain - Cerebellar Hemisphere 0002037 739 BP-42768 RNA isolation_PAXgene Tissue miRNA 08/27/2013 LCSET-4415 12/21/2013 TruSeq.v1 RNASEQ 0.98763 611096 0.945205 0.990939 0.736915 23436 1 76 0.00227529 201 0 8.34004e+07 0.054235 895176 8.41629e+07 1.12202e+07 23460 4.14294e+07 0 0.208289 0.990939 0.730238 8.34004e+07 0.00404169 1.79153e+07 1.44313e+07 1.80154e+07 211 1.8121e+07 1.15237e+07 0.00315554 1.80616e+07 49.9179 0.0106362 0.994249 0 50.1393 GTEX-11OF3-0011-R5a-SM-57WB4 B1, A1 7.7 Brain Brain - Caudate (basal ganglia) 0001873 739 BP-42719 RNA isolation_PAXgene Tissue miRNA 08/26/2013 LCSET-4415 12/21/2013 TruSeq.v1 RNASEQ 0.99159 504131 0.961057 0.993973 0.835098 23460 1 76 0.00212333 197 0 7.09786e+07 0.0385759 3.89854e+06 7.1409e+07 8.18636e+06 23477 3.53244e+07 0 0.125959 0.993973 0.830064 7.09786e+07 0.00374055 1.55902e+07 1.92866e+07 1.54732e+07 230 1.54786e+07 8.04463e+06 0.00293 1.57293e+07 50.4017 0.0545945 0.996355 0 49.8115 GTEX-11OF3-0011-R6b-SM-57WBG B1, A1 7 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 739 BP-42719 RNA isolation_PAXgene Tissue miRNA 08/26/2013 LCSET-4415 12/21/2013 TruSeq.v1 RNASEQ 0.989724 703014 0.959657 0.992463 0.837302 23956 1 76 0.00214549 270 0 8.60156e+07 0.039942 5.21215e+06 8.66688e+07 9.91663e+06 23970 4.27843e+07 0 0.122356 0.992463 0.830991 8.60156e+07 0.00370958 1.88523e+07 2.22715e+07 1.87498e+07 299 1.87313e+07 1.0524e+07 0.00292537 1.90834e+07 50.4655 0.0601387 0.995203 0 49.8637 GTEX-11OF3-0011-R7a-SM-57WCG B1, A1 7.8 Brain Brain - Putamen (basal ganglia) 0001874 739 BP-42719 RNA isolation_PAXgene Tissue miRNA 08/26/2013 LCSET-4415 12/21/2013 TruSeq.v1 RNASEQ 0.9911 582885 0.96048 0.993376 0.837077 23151 1 76 0.00220312 268 0 7.87878e+07 0.0392546 5.29986e+06 7.93131e+07 9.03883e+06 23162 3.92095e+07 0 0.123403 0.993376 0.831532 7.87878e+07 0.00382757 1.7242e+07 2.16268e+07 1.7271e+07 288 1.71631e+07 7.90931e+06 0.00301348 1.75146e+07 50.5069 0.066822 0.995652 0 50.042 GTEX-11OF3-0011-R8b-SM-57WCS B1, A1 7.6 Brain Brain - Hypothalamus 0001898 739 BP-42719 RNA isolation_PAXgene Tissue miRNA 08/26/2013 LCSET-4415 12/21/2013 TruSeq.v1 RNASEQ 0.989918 612077 0.959887 0.992801 0.837863 24434 1 76 0.00215146 270 0 8.35257e+07 0.0397497 3.76548e+06 8.41314e+07 1.04032e+07 24454 4.15441e+07 0 0.122024 0.992801 0.831831 8.35257e+07 0.00368854 1.83789e+07 1.71483e+07 1.83575e+07 282 1.83564e+07 1.02278e+07 0.00291777 1.85986e+07 50.3277 0.0447571 0.995684 0 49.9709 GTEX-11OF3-0126-SM-5PNYF 1 B1 6 pieces; well trimmed 6.7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 769 1035 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.987835 320381 0.975741 0.988117 0.80734 24236 1 76 0.00334289 227 0 1.02216e+08 0.0240192 403689 1.03445e+08 3.86061e+06 24263 5.0816e+07 0 0.1684 0.988117 0.797747 1.02216e+08 0.00396843 2.24594e+07 1.27019e+07 2.25885e+07 245 2.2552e+07 1.89999e+07 0.00365557 2.2532e+07 49.9778 0.00390245 0.988399 0 50.1432 GTEX-11OF3-0626-SM-5BC4Y 2 B1 2 pieces 6.5 Thyroid Thyroid 0002046 788 1016 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.986819 280421 0.968461 0.99071 0.756886 24561 1 76 0.00279495 142 0 7.10659e+07 0.0311937 328699 7.17323e+07 1.71323e+07 24597 3.52795e+07 0 0.211575 0.99071 0.749854 7.10659e+07 0.00492491 1.55171e+07 8.15127e+06 1.57053e+07 157 1.57696e+07 1.08015e+07 0.00385575 1.57154e+07 49.914 0.0045823 0.994601 0 50.3014 GTEX-11OF3-0726-SM-5BC4Z 2 B1 2 pieces; moderate central vascular congestion; mild macrovesicular steatosis; thin capsule present 6 Liver Liver 0001114 790 1014 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.984743 295130 0.967942 0.989875 0.793145 21133 1 76 0.00284267 131 0 6.12333e+07 0.0319205 2.05868e+06 6.18597e+07 1.36821e+07 21156 3.03625e+07 0 0.174797 0.989875 0.785115 6.12333e+07 0.00551899 1.33943e+07 8.64773e+06 1.32334e+07 153 1.32644e+07 7.59146e+06 0.0041739 1.36428e+07 50.7031 0.0332799 0.995007 0 49.6979 GTEX-11OF3-0826-SM-5BC51 0 B1 Multiple fragments. 6.2 Adipose Tissue Adipose - Visceral (Omentum) 0010414 791 1013 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.98432 251162 0.969876 0.989005 0.782476 23528 1 76 0.00285591 140 0 6.41217e+07 0.0298662 535467 6.48345e+07 1.6696e+07 23553 3.17986e+07 0 0.1874 0.989005 0.773873 6.41217e+07 0.0053337 1.40229e+07 8.92869e+06 1.41097e+07 156 1.41467e+07 8.67143e+06 0.00408894 1.42717e+07 50.2198 0.00825898 0.99369 0 50.1543 GTEX-11OF3-1126-SM-5986C 2 B1 2 pieces; patchy alveolar hemorrhage; pleura present 6.9 Lung Lung 0008952 796 1008 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.985349 213688 0.975094 0.990052 0.772441 22284 1 76 0.00288112 121 0 6.11541e+07 0.0245858 326819 6.17685e+07 1.39606e+07 22305 3.03468e+07 0 0.202654 0.990052 0.764757 6.11541e+07 0.00643468 1.35071e+07 6.84691e+06 1.35956e+07 131 1.36837e+07 9.70242e+06 0.00464946 1.36912e+07 50.0136 0.00529103 0.994755 0 50.1633 GTEX-11OF3-1326-SM-5N9FJ 2 B1 6 pieces 5.7 Kidney Kidney - Cortex 0001225 800 1004 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.988601 350911 0.975626 0.990358 0.85003 22815 1 76 0.00428539 268 0 9.6745e+07 0.0242219 4.41839e+06 9.76869e+07 5.02713e+06 22830 4.81033e+07 0 0.125596 0.990358 0.841834 9.6745e+07 0.00433752 2.12747e+07 3.06562e+07 2.15202e+07 319 2.15176e+07 8.73873e+06 0.00431141 2.14328e+07 49.9013 0.0452301 0.992114 0 50.2869 GTEX-11OF3-1326-SM-DLIPK 2 B1 6 pieces Kidney Kidney - Cortex 0001225 800 1004 BP-53580 DNA Extraction from Paxgene-derived Lysate Plate Based 06/05/2014 LCSET-10442 01/23/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-11OF3-1326-SM-DMZ32 2 B1 6 pieces Kidney Kidney - Cortex 0001225 800 1004 BP-53580 DNA Extraction from Paxgene-derived Lysate Plate Based 06/05/2014 LCSET-10532 01/29/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-11OF3-1726-SM-5GU5Q 3 B1 2 pieces: glands autolyzed = 3; stroma -1; 1 piece is 40% fat 5.9 Prostate Prostate 0002367 817 987 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.989111 256917 0.964874 0.991667 0.79019 24420 1 76 0.00217716 153 0 6.67982e+07 0.0349091 1.3719e+06 6.73595e+07 4.2677e+06 24446 3.31959e+07 0 0.174684 0.991667 0.783605 6.67982e+07 0.00317079 1.47185e+07 7.19384e+06 1.47844e+07 179 1.4691e+07 7.75885e+06 0.00267269 1.49739e+07 50.4768 0.0203668 0.994222 0 50.1118 GTEX-11OF3-1826-SM-5987N 2 B1 2 pieces; spermatogenesis 6.1 Testis Testis 0000473 820 984 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.982026 483355 0.927083 0.987427 0.73066 33590 1 76 0.00282895 219 0 9.70145e+07 0.0725826 986659 9.82497e+07 2.48364e+07 33657 4.81257e+07 0 0.196424 0.987427 0.721473 9.70145e+07 0.00631313 1.98975e+07 1.60334e+07 1.9864e+07 215 2.00782e+07 1.56311e+07 0.00456151 2.01425e+07 50.0799 0.0100424 0.992828 0 49.9578 GTEX-11OF3-1926-SM-59889 1 B1 2 pieces; fibroadipose tissue without mammary ducts 6.4 Breast Breast - Mammary Tissue 0008367 827 977 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.986393 254663 0.977671 0.990212 0.806445 23623 1 76 0.00268941 170 0 8.03694e+07 0.0219651 344195 8.11638e+07 1.54723e+07 23648 3.99163e+07 0 0.171227 0.990212 0.798551 8.03694e+07 0.0060682 1.77105e+07 9.17631e+06 1.78195e+07 182 1.78734e+07 1.39632e+07 0.00437229 1.79471e+07 50.1029 0.00424074 0.994032 0 50.1533 GTEX-11OF3-2226-SM-5986F 1 B1 6 pieces; well dissected muscularis 5.9 Esophagus Esophagus - Muscularis 0004648 834 970 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.978836 220911 0.973115 0.98672 0.828391 22154 1 76 0.00292586 129 0 5.90641e+07 0.0267371 2.10928e+06 5.9859e+07 1.24645e+07 22170 2.92121e+07 0 0.144725 0.98672 0.81739 5.90641e+07 0.0083186 1.32243e+07 7.21157e+06 1.28869e+07 159 1.29664e+07 5.86968e+06 0.00560068 1.35695e+07 51.1365 0.0352374 0.994605 0 49.3541 GTEX-11OF3-2326-SM-5GU73 1 B1 6 pieces; well dissected muscularis except for 10% external fat on 2 pieces 6.2 Esophagus Esophagus - Gastroesophageal Junction 0004550 837 967 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.986477 243780 0.967848 0.989542 0.81131 22384 1 76 0.00221311 152 0 6.54139e+07 0.0319667 2.08976e+06 6.61053e+07 4.4429e+06 22402 3.24926e+07 0 0.156538 0.989542 0.802825 6.54139e+07 0.00319492 1.42116e+07 6.73469e+06 1.43674e+07 182 1.43443e+07 7.35008e+06 0.00270249 1.44199e+07 50.1314 0.0316126 0.992606 0 50.2726 GTEX-11OF3-2426-SM-5Q5AS 1 B1 2 pieces 6.3 Adipose Tissue Adipose - Subcutaneous 0002190 885 919 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.983763 168054 0.974518 0.985831 0.802106 22971 1 76 0.0019636 164 0 7.08155e+07 0.0252055 488572 7.18334e+07 4.95051e+06 22991 3.52204e+07 0 0.172411 0.985831 0.790741 7.08155e+07 0.00308406 1.56266e+07 7.0647e+06 1.56393e+07 177 1.5591e+07 1.1342e+07 0.00252265 1.58196e+07 50.3639 0.00680146 0.987899 0 50.0204 GTEX-11OF3-2526-SM-5P9JL 0 B1 2 pieces; 1 with 20% internal fat 7.7 Muscle Muscle - Skeletal 0011907 887 917 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4916 03/27/2014 TruSeq.v1 RNASEQ 0.992957 201339 0.984231 0.993511 0.88285 20387 1 76 0.00294785 270 0 9.98084e+07 0.0155235 1.24743e+06 1.0046e+08 3.29846e+06 20401 4.97602e+07 0 0.101381 0.993511 0.877121 9.98084e+07 0.00319303 2.18788e+07 1.01254e+07 2.20259e+07 264 2.19822e+07 2.22289e+07 0.00307037 2.19767e+07 49.9937 0.0124172 0.994065 0 50.1675 GTEX-11OF3-2626-SM-5GU7F 0 B1 6 pieces; well trimmed except for 1 with 1 mm subcutaneous fat 8.3 Skin Skin - Sun Exposed (Lower leg) 0004264 887 917 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4803,LCSET-5132 03/08/2014 TruSeq.v1 RNASEQ 0.990918 417365 0.97615 0.99328 0.810331 23673 1 76 0.00223034 201 0 8.30553e+07 0.0235515 408986 8.36172e+07 5.50074e+06 23703 4.13013e+07 0 0.165818 0.99328 0.804886 8.30553e+07 0.00332998 1.80843e+07 8.82137e+06 1.81768e+07 191 1.81685e+07 1.57017e+07 0.00277885 1.82802e+07 50.1532 0.00489117 0.995642 0 50.1276 GTEX-11OF3-2926-SM-5HL78 1 B1 2 pieces; cortex 6.3 Brain Brain - Cortex 0001870 958 846 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.985609 1.18438e+06 0.885494 0.987668 0.627726 24293 1 76 0.0024448 157 0 8.35921e+07 0.114057 1.52718e+06 8.46358e+07 9.34124e+06 24321 4.1586e+07 0 0.257768 0.987668 0.619984 8.35921e+07 0.00346396 1.6663e+07 7.76306e+07 1.73464e+07 174 1.73532e+07 8.09425e+06 0.00295331 1.68274e+07 49.2309 0.0180441 0.989727 0 51.0047 GTEX-11OF3-3026-SM-5GU52 2 B1 2 pieces; larger is anterior, smaller is posterior 7.1 Pituitary Pituitary 0000007 959 845 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.990224 399952 0.961913 0.992693 0.758313 25338 1 76 0.00210214 131 0 6.4677e+07 0.0378099 542123 6.51531e+07 3.90841e+06 25377 3.21445e+07 0 0.2036 0.992693 0.752772 6.4677e+07 0.00299002 1.37543e+07 6.58356e+06 1.38586e+07 151 1.38542e+07 9.46936e+06 0.00254498 1.39114e+07 50.1031 0.00832075 0.995162 0 50.1889 GTEX-11OF3-3126-SM-5GU5E 1 B1 2 pieces; quantity insufficient 7.3 Brain Brain - Cerebellum 0002037 960 844 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4803 02/19/2014 TruSeq.v1 EXCLUDE 0.990981 398002 0.961725 0.993336 0.839362 22566 1 76 0.00207517 145 0 6.04036e+07 0.0379076 1.99801e+06 6.08088e+07 3.4369e+06 22576 3.00458e+07 0 0.122362 0.993336 0.833769 6.04036e+07 0.00305159 1.31993e+07 1.27271e+07 1.33798e+07 173 1.33132e+07 7.22816e+06 0.00256222 1.33995e+07 50.1616 0.0328573 0.995692 0 50.3394 GTEX-11ONC-0003-SM-5DWT5 B1 Blood Whole Blood 0013756 593 BP-39922 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/14/2013 GTEx_OM25_Dec_01 01/28/2014 Illumina OMNI SNP Array OMNI GTEX-11ONC-0005-SM-5O9CY B1 7.2 Blood Whole Blood 0013756 593 BP-39923 RNA isolation_PAXgene Blood RNA (Manual) 06/14/2013 LCSET-4910 04/01/2014 TruSeq.v1 RNASEQ 0.950998 372603 0.986665 0.953421 0.81538 17596 1 76 0.00354178 137 0 1.22893e+08 0.0120629 260035 1.28897e+08 5.15759e+06 17599 6.1094e+07 0 0.171285 0.953421 0.777401 1.22893e+08 0.00491664 2.94552e+07 2.19544e+08 2.96283e+07 174 2.96804e+07 3.63854e+07 0.00422746 2.9736e+07 50.0468 0.00201738 0.955843 0 50.1465 GTEX-11ONC-0008-SM-5S2MG B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 736 BP-45530 RNA isolation_Trizol Manual (Cell Pellet) 11/06/2013 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.993417 526206 0.970654 0.994998 0.857487 19828 1 76 0.00144376 152 0 6.92866e+07 0.0290525 338328 6.96349e+07 5.07134e+06 19839 3.45053e+07 0 0.113167 0.994998 0.853198 6.92866e+07 0.00225347 1.52645e+07 1.36023e+07 1.53474e+07 160 1.53041e+07 1.61822e+07 0.00184797 1.54349e+07 50.2129 0.0048586 0.99658 0 50.1355 GTEX-11ONC-0011-R1a-SM-57WD4 B1, A1 5.9 Brain Brain - Hippocampus 0001954 587 BP-42768 RNA isolation_PAXgene Tissue miRNA 08/27/2013 LCSET-4415 12/21/2013 TruSeq.v1 RNASEQ 0.990025 316112 0.967023 0.992761 0.827633 21936 1 76 0.00181597 195 0 6.19234e+07 0.0327934 6.1242e+06 6.23749e+07 7.59941e+06 21947 3.08137e+07 0 0.13939 0.992761 0.821642 6.19234e+07 0.00349746 1.36054e+07 1.99959e+07 1.3509e+07 220 1.33389e+07 4.57026e+06 0.0026544 1.39232e+07 51.0716 0.0981837 0.995497 0 49.8223 GTEX-11ONC-0011-R4b-SM-DO93H B1, A1 7.1 Brain Brain - Amygdala 0001876 587 BP-43065 RNA isolation_PAXgene Tissue miRNA 09/04/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.994332 349019 0.970806 0.995417 0.851563 22636 1 76 0.00170553 370 0 7.6691e+07 0.0289794 8.36505e+06 7.7044e+07 4.43589e+06 22651 3.82153e+07 0 0.119243 0.995417 0.847661 7.6691e+07 0.00248467 1.68958e+07 1.52787e+07 1.71865e+07 331 1.6988e+07 6.97059e+06 0.00209467 1.71614e+07 50.254 0.108575 0.996503 0 50.4264 GTEX-11ONC-0011-R5b-SM-DO93I B1, A1 8.9 Brain Brain - Caudate (basal ganglia) 0001873 587 BP-43065 RNA isolation_PAXgene Tissue miRNA 09/04/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.994309 627988 0.966308 0.995203 0.829943 24391 1 76 0.00174757 373 0 9.85372e+07 0.0333757 5.8183e+06 9.90122e+07 5.35142e+06 24415 4.9105e+07 0 0.136366 0.995203 0.825961 9.85372e+07 0.00233025 2.15269e+07 1.86093e+07 2.19208e+07 346 2.17583e+07 1.17331e+07 0.00203865 2.17609e+07 50.003 0.0587635 0.996096 0 50.4532 GTEX-11ONC-0011-R6a-SM-DO12A B1, A1 8.4 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 587 BP-43065 RNA isolation_PAXgene Tissue miRNA 09/04/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.987671 361876 0.967511 0.99189 0.838419 24039 1 76 0.00217779 268 0 9.19009e+07 0.0322251 8.0558e+06 9.26523e+07 9.75606e+06 24061 4.56566e+07 0 0.129092 0.99189 0.831619 9.19009e+07 0.00430738 2.00045e+07 1.99672e+07 2.04662e+07 314 2.04784e+07 9.14681e+06 0.00323806 2.03121e+07 49.7961 0.0869465 0.996109 0 50.5704 GTEX-11ONC-0011-R7b-SM-DO93J B1, A1 8 Brain Brain - Putamen (basal ganglia) 0001874 587 BP-43065 RNA isolation_PAXgene Tissue miRNA 09/04/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.993998 658651 0.967831 0.994962 0.84096 24031 1 76 0.00175418 374 0 1.09996e+08 0.0318951 8.63167e+06 1.10553e+08 6.51257e+06 24053 5.482e+07 0 0.126871 0.994962 0.836723 1.09996e+08 0.0020529 2.38551e+07 2.73033e+07 2.44386e+07 348 2.42514e+07 1.16885e+07 0.00190339 2.41337e+07 49.8783 0.0780769 0.995926 0 50.6041 GTEX-11ONC-0011-R8b-SM-5NQ87 B1, A1 7.6 Brain Brain - Hypothalamus 0001898 587 BP-42719 RNA isolation_PAXgene Tissue miRNA 08/26/2013 LCSET-4906 03/22/2014 TruSeq.v1 RNASEQ 0.991862 298491 0.960941 0.99381 0.815598 23864 1 76 0.0019405 200 0 7.0563e+07 0.0388293 4.38178e+06 7.10025e+07 5.69586e+06 23882 3.51356e+07 0 0.145343 0.99381 0.810549 7.0563e+07 0.00276653 1.52659e+07 1.6909e+07 1.56725e+07 252 1.55146e+07 6.7528e+06 0.00235271 1.55488e+07 50.055 0.061713 0.995758 0 50.6571 GTEX-11ONC-0011-R9b-SM-5NQ8J B1, A1 7.2 Brain Brain - Spinal cord (cervical c-1) 0006469 587 BP-42719 RNA isolation_PAXgene Tissue miRNA 08/26/2013 LCSET-4906 03/22/2014 TruSeq.v1 RNASEQ 0.992386 310935 0.96181 0.994535 0.813037 22391 1 76 0.00184327 215 0 6.74718e+07 0.0379673 4.54161e+06 6.78426e+07 5.10886e+06 22408 3.35991e+07 0 0.148773 0.994535 0.808594 6.74718e+07 0.00273916 1.47112e+07 1.84593e+07 1.50399e+07 235 1.48272e+07 6.34435e+06 0.00229025 1.50509e+07 50.3744 0.0669434 0.996684 0 50.5525 GTEX-11ONC-0126-SM-5PNW6 0 B1 2 pieces; hypertrophied myofibers 5.7 Heart Heart - Left Ventricle 0006566 656 671 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.991275 171725 0.98019 0.993417 0.872452 19439 1 76 0.00166389 366 0 7.61716e+07 0.0197215 4.81366e+06 7.66763e+07 6.94124e+06 19447 3.79137e+07 0 0.107738 0.993417 0.866709 7.61716e+07 0.00267023 1.69047e+07 1.72178e+07 1.69578e+07 335 1.65628e+07 6.13824e+06 0.00216597 1.74198e+07 51.2609 0.0627789 0.995561 0 50.0784 GTEX-11ONC-0526-SM-5BC57 1 B1 2 pieces; 20% internal fat 6.8 Pancreas Pancreas 0001150 660 667 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.973216 281752 0.982924 0.97865 0.842187 20383 1 76 0.00306111 101 0 6.8644e+07 0.0165136 179204 7.01416e+07 1.85357e+07 20394 3.40288e+07 0 0.140737 0.97865 0.824206 6.8644e+07 0.00629329 1.57717e+07 2.81028e+07 1.59351e+07 111 1.59495e+07 2.22627e+07 0.00466823 1.61324e+07 50.2851 0.00255489 0.984083 0 50.2577 GTEX-11ONC-0926-SM-5BC5E 1 B1 6 pieces; no plaques; well trimmed 6.3 Blood Vessel Artery - Aorta 0001496 667 660 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.983711 333449 0.970297 0.988688 0.713519 23882 1 76 0.00289708 153 0 8.23952e+07 0.0292765 235966 8.33379e+07 2.11094e+07 23919 4.0816e+07 0 0.256778 0.988688 0.705448 8.23952e+07 0.00534018 1.77429e+07 8.46942e+06 1.79828e+07 167 1.80744e+07 1.21695e+07 0.00411248 1.80444e+07 49.9584 0.00283144 0.993665 0 50.3358 GTEX-11ONC-1026-SM-5GU64 0 B1 2 pieces; 1 piece has 30% fibrous component 6.9 Heart Heart - Atrial Appendage 0006631 668 659 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.989962 220396 0.97894 0.992787 0.83037 20423 1 76 0.0017745 128 0 5.29358e+07 0.020883 1.97387e+06 5.33204e+07 3.41884e+06 20437 2.63077e+07 0 0.14857 0.992787 0.824381 5.29358e+07 0.00281759 1.15753e+07 7.87137e+06 1.15792e+07 155 1.14617e+07 6.37578e+06 0.00229456 1.18254e+07 50.781 0.0370191 0.995613 0 50.0085 GTEX-11ONC-1126-SM-5GU6G 1 B1 2 pieces; moderate sclerosis; 25% fat around 1 piece 6.1 Blood Vessel Artery - Coronary 0001621 681 646 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.986619 192882 0.971327 0.989163 0.779646 22344 1 76 0.00207899 126 0 5.69174e+07 0.0283383 320433 5.7541e+07 3.63409e+06 22365 2.82735e+07 0 0.191681 0.989163 0.771197 5.69174e+07 0.00307363 1.22544e+07 5.5887e+06 1.24245e+07 136 1.23754e+07 9.36499e+06 0.00257503 1.24462e+07 50.1426 0.00556878 0.991707 0 50.3445 GTEX-11ONC-1326-SM-DLIPJ 2 B1 6 pieces; vascular congestion; no glomerular lesions Kidney Kidney - Cortex 0001225 678 649 BP-53779 DNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2014 LCSET-10442 01/23/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-11ONC-1426-SM-5N9F4 1 B1 6 pieces; well dissected muscularis 5.7 Esophagus Esophagus - Muscularis 0004648 686 641 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.986467 320924 0.972407 0.987944 0.792791 23276 1 76 0.00402032 199 0 8.52734e+07 0.0274204 2.1052e+06 8.63141e+07 4.23119e+06 23300 4.23401e+07 0 0.179617 0.987944 0.783233 8.52734e+07 0.00411212 1.87442e+07 9.07151e+06 1.88048e+07 252 1.87513e+07 9.62916e+06 0.00406615 1.89227e+07 50.2274 0.0243899 0.98942 0 50.0806 GTEX-11ONC-1526-SM-5GU6S 1 B1 6 pieces; well dissected mucosa 6.5 Esophagus Esophagus - Mucosa 0006920 686 641 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.989106 240466 0.974487 0.991916 0.798993 21757 1 76 0.00201276 134 0 6.49575e+07 0.0251957 775741 6.54869e+07 4.2449e+06 21773 3.22823e+07 0 0.175494 0.991916 0.792534 6.49575e+07 0.00303703 1.45346e+07 7.78114e+06 1.46544e+07 165 1.46278e+07 9.53112e+06 0.00252344 1.47414e+07 50.1934 0.0118457 0.994726 0 50.2052 GTEX-11ONC-1926-SM-5GU75 0 B1 6 pieces; well dissected muscularis 5.8 Colon Colon - Sigmoid 0001159 703 624 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.989966 262132 0.967836 0.992453 0.767714 22741 1 76 0.00200613 121 0 5.84442e+07 0.0319655 518427 5.88886e+07 3.77619e+06 22765 2.90458e+07 0 0.200121 0.992453 0.76192 5.84442e+07 0.00289586 1.26496e+07 5.64384e+06 1.27038e+07 142 1.26568e+07 8.10399e+06 0.00244988 1.28359e+07 50.3513 0.00880351 0.994941 0 50.107 GTEX-11ONC-2026-SM-5HL61 2 B1 6 pieces; 3 with minimal mucosa 6.3 Colon Colon - Transverse 0001157 708 619 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.991276 203652 0.97298 0.993194 0.773141 22878 1 76 0.00204426 131 0 6.34722e+07 0.0267687 544184 6.39071e+07 6.93344e+06 22898 3.15956e+07 0 0.199839 0.993194 0.767879 6.34722e+07 0.00283933 1.38609e+07 6.06729e+06 1.39621e+07 149 1.39438e+07 9.53893e+06 0.00244102 1.39949e+07 50.0916 0.00851523 0.995113 0 50.1818 GTEX-11ONC-2126-SM-5HL6E 1 B1 2 pieces; ducts present, especially in 1 piece [annotated] 7.2 Breast Breast - Mammary Tissue 0008367 714 613 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.989992 215254 0.972787 0.992693 0.783401 23054 1 76 0.00208492 137 0 6.40247e+07 0.0269321 275885 6.4496e+07 7.38091e+06 23082 3.18323e+07 0 0.189385 0.992693 0.777677 6.40247e+07 0.0032079 1.40299e+07 7.1278e+06 1.40682e+07 150 1.40602e+07 1.06488e+07 0.00264488 1.42049e+07 50.2561 0.00427755 0.995394 0 50.0681 GTEX-11ONC-2226-SM-5HL6D 1 B1 2 pieces; reduced spermatogenesis 5.8 Testis Testis 0000473 718 609 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.990891 370301 0.93649 0.992748 0.726911 31236 1 76 0.00215966 139 0 6.78121e+07 0.0632839 809465 6.83075e+07 7.24302e+06 31292 3.37615e+07 0 0.209578 0.992748 0.72164 6.78121e+07 0.00303494 1.44061e+07 1.30502e+07 1.44134e+07 152 1.44094e+07 9.20418e+06 0.00259648 1.45267e+07 50.2026 0.0118503 0.994606 0 50.0126 GTEX-11ONC-2326-SM-5HL6P 0 B1 4 pieces; up to 50% fatty envelope 6.7 Nerve Nerve - Tibial 0001323 734 593 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.989086 196746 0.97035 0.991648 0.77585 23040 1 76 0.00213783 136 0 5.76991e+07 0.0293372 266270 5.8185e+07 6.7815e+06 23060 2.8696e+07 0 0.1945 0.991648 0.76937 5.76991e+07 0.00330979 1.26865e+07 6.05182e+06 1.2812e+07 135 1.28138e+07 9.58106e+06 0.0027223 1.28287e+07 50.0292 0.00457626 0.99421 0 50.2462 GTEX-11ONC-2326-SM-DOKK8 0 B1 4 pieces; up to 50% fatty envelope Nerve Nerve - Tibial 0001323 734 593 BP-53786 DNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2014 LCSET-10574 02/14/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-11ONC-2426-SM-5GU7H 0 B1 2 pieces; 10 & 20% internal fat 8.6 Muscle Muscle - Skeletal 0011907 734 593 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.992779 273039 0.982724 0.994802 0.860979 19703 1 76 0.00160611 129 0 6.25726e+07 0.0169897 469794 6.28996e+07 3.80505e+06 19714 3.11557e+07 0 0.121745 0.994802 0.856503 6.25726e+07 0.00244739 1.33103e+07 5.88451e+06 1.34266e+07 147 1.3394e+07 1.31777e+07 0.00202589 1.34588e+07 50.1208 0.00746895 0.996825 0 50.2174 GTEX-11ONC-2526-SM-5986W 0 B1 2 pieces; 20% fibrous tissue in 1 piece 7.5 Adipose Tissue Adipose - Subcutaneous 0002190 735 592 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.985309 346631 0.97461 0.989515 0.786205 24795 1 76 0.00267754 221 0 9.11943e+07 0.0250376 284025 9.21606e+07 1.91409e+07 24833 4.52945e+07 0 0.188404 0.989515 0.777962 9.11943e+07 0.00603196 2.00569e+07 9.81278e+06 2.01461e+07 226 2.02635e+07 1.59046e+07 0.00434762 2.03004e+07 50.0455 0.00308185 0.993721 0 50.1109 GTEX-11ONC-2726-SM-5N9DZ 1 B1 3 pieces; prominent calcified plaques 5.7 Blood Vessel Artery - Tibial 0007610 740 587 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.984286 327909 0.97243 0.985183 0.779038 23901 1 76 0.00411551 215 0 1.01568e+08 0.027235 502799 1.03095e+08 5.56583e+06 23941 5.03547e+07 0 0.193392 0.985183 0.767495 1.01568e+08 0.00439489 2.20783e+07 1.09042e+07 2.21899e+07 243 2.20919e+07 1.70069e+07 0.00425507 2.22721e+07 50.2031 0.00487703 0.98608 0 50.126 GTEX-11ONC-2826-SM-5P9GQ 2 B1 1 piece; mostly anterior; posterior annotated 6.5 Pituitary Pituitary 0000007 920 407 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4914 03/27/2014 TruSeq.v1 RNASEQ 0.991972 428847 0.963492 0.992301 0.739282 27114 1 76 0.00302589 273 0 1.19246e+08 0.036263 1.0983e+06 1.20172e+08 3.93966e+06 27172 5.93654e+07 0 0.22421 0.992301 0.733591 1.19246e+08 0.00366388 2.62597e+07 1.77211e+07 2.65014e+07 329 2.64371e+07 1.69979e+07 0.00334478 2.63683e+07 49.9349 0.00913944 0.992631 0 50.2291 GTEX-11ONC-2926-SM-5P9JM 1 B1 2 pieces, 1 with meninges (up to 0.77mm thick) 6.7 Brain Brain - Cortex 0001870 921 406 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4916 03/27/2014 TruSeq.v1 RNASEQ 0.99312 527316 0.954248 0.993498 0.801466 24823 1 76 0.00301278 271 0 9.79128e+07 0.0454241 4.0666e+06 9.85536e+07 2.91602e+06 24847 4.8804e+07 0 0.152782 0.993498 0.796255 9.79128e+07 0.00316005 2.11983e+07 3.08704e+07 2.14026e+07 287 2.12627e+07 1.15573e+07 0.00308639 2.13803e+07 50.1379 0.0412628 0.993877 0 50.2398 GTEX-11ONC-3026-SM-5985W 1 B1 2 pieces; well preserved Purkinje cells 6.1 Brain Brain - Cerebellum 0002037 922 405 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.982849 494131 0.939595 0.988058 0.721466 24121 1 76 0.00283634 151 0 7.54851e+07 0.0601016 1.54468e+06 7.63974e+07 1.75957e+07 24147 3.7447e+07 0 0.218129 0.988058 0.712851 7.54851e+07 0.00674076 1.61764e+07 2.47895e+07 1.61923e+07 165 1.62808e+07 8.46550e+06 0.00477826 1.64483e+07 50.2559 0.020219 0.993268 0 50.0245 GTEX-11P7K-0002-SM-58Q9D B1 Blood Whole Blood 0013756 -101 BP-40040 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/19/2013 LCSET-4574 01/20/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-11P7K-0002-SM-5DWTW B1 Blood Whole Blood 0013756 -101 BP-40040 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/19/2013 GTEx_OM25_Dec_01 01/29/2014 Illumina OMNI SNP Array OMNI GTEX-11P7K-0002-SM-6WBUI B1 Blood Whole Blood 0013756 -101 BP-40040 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/19/2013 LCSET-6056 09/22/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-11P7K-0003-SM-5S2OU B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -101 BP-45438 RNA isolation_Trizol Manual (Cell Pellet) 11/04/2013 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.9919 553405 0.962749 0.993397 0.823771 19726 1 76 0.00222741 140 0 6.38517e+07 0.0366143 447965 6.42761e+07 4.25375e+06 19738 3.17761e+07 0 0.138978 0.993397 0.818332 6.38517e+07 0.00300738 1.4065e+07 1.27329e+07 1.4128e+07 142 1.4088e+07 1.39533e+07 0.00261681 1.42135e+07 50.2218 0.00696939 0.994895 0 50.1118 GTEX-11P7K-0006-SM-5N9FM B1 8.8 Blood Whole Blood 0013756 -101 BP-39959 RNA isolation_PAXgene Blood RNA (Manual) 06/17/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.985927 902471 0.96351 0.987542 0.822894 19504 1 76 0.00480826 160 0 9.67063e+07 0.035562 382970 9.79263e+07 4.40997e+06 19516 4.80653e+07 0 0.140616 0.987542 0.812642 9.67063e+07 0.0048466 2.16585e+07 8.38461e+07 2.1771e+07 176 2.17928e+07 2.26602e+07 0.0048274 2.18048e+07 50.0138 0.0039108 0.989156 0 50.1296 GTEX-11P7K-0008-SM-5S2O5 B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 351 BP-45530 RNA isolation_Trizol Manual (Cell Pellet) 11/06/2013 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.992996 494477 0.971855 0.995158 0.873478 19618 1 76 0.00160796 167 0 7.22655e+07 0.0279305 229528 7.26171e+07 5.5891e+06 19625 3.59799e+07 0 0.0983774 0.995158 0.869249 7.22655e+07 0.00226475 1.58783e+07 1.5273e+07 1.60661e+07 172 1.60417e+07 1.70672e+07 0.00193564 1.6067e+07 50.0394 0.0031608 0.99732 0 50.294 GTEX-11P7K-0126-SM-5986E 1 B1 2 pieces; well trimmed except for 10-20% external stroma 8.8 Adrenal Gland Adrenal Gland 0002369 89 1080 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.985987 278026 0.978294 0.990708 0.845329 22273 1 76 0.00310571 158 0 7.74908e+07 0.0213678 1.73726e+06 7.82176e+07 1.73199e+07 22294 3.84816e+07 0 0.132965 0.990708 0.837474 7.74908e+07 0.00655561 1.72301e+07 1.1004e+07 1.70422e+07 191 1.71032e+07 1.2613e+07 0.00482244 1.74848e+07 50.5517 0.0222106 0.99543 0 49.7259 GTEX-11P7K-0226-SM-5986Z 1 B1 2 pieces; well dissected 7 Thyroid Thyroid 0002046 96 1073 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.984499 266071 0.964777 0.989138 0.746482 23328 1 76 0.00299641 113 0 6.48512e+07 0.0349634 277574 6.55634e+07 1.42763e+07 23362 3.22033e+07 0 0.218295 0.989138 0.738373 6.48512e+07 0.00656549 1.41e+07 8.08383e+06 1.41185e+07 129 1.4214e+07 9.86145e+06 0.00477258 1.42793e+07 50.1146 0.00423368 0.993776 0 50.0327 GTEX-11P7K-0326-SM-59871 1 B1 2 pieces; emphysema & atelectasis 6.9 Lung Lung 0008952 101 1068 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.98532 251054 0.97136 0.989354 0.816785 24033 1 76 0.00306708 163 0 7.46815e+07 0.0282711 373957 7.54851e+07 1.66095e+07 24058 3.71036e+07 0 0.154576 0.989354 0.808089 7.46815e+07 0.00610415 1.6462e+07 8.033e+06 1.6574e+07 174 1.66242e+07 1.21427e+07 0.00457942 1.6694e+07 50.1047 0.00495405 0.993388 0 50.1695 GTEX-11P7K-0426-SM-5BC5H 1 B1 2 pieces; slight congestion 5.8 Spleen Spleen 0002106 104 1065 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.983739 249991 0.953521 0.988699 0.741953 24495 1 76 0.00339853 127 0 6.77556e+07 0.045481 536551 6.853e+07 1.811e+07 24527 3.35594e+07 0 0.211567 0.988699 0.733569 6.77556e+07 0.0061612 1.46873e+07 1.12303e+07 1.48055e+07 145 1.48638e+07 9.53157e+06 0.00477294 1.49377e+07 50.124 0.00782943 0.993659 0 50.2005 GTEX-11P7K-0526-SM-5BC5I 0 B1 2 pieces; well trimmed 6.9 Pancreas Pancreas 0001150 111 1058 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.984412 231217 0.978385 0.989941 0.846274 22126 1 76 0.00301259 110 0 7.51244e+07 0.0211108 259372 7.58878e+07 2.20328e+07 22142 3.72602e+07 0 0.132111 0.989941 0.837761 7.51244e+07 0.00598726 1.71097e+07 2.43727e+07 1.72524e+07 122 1.73176e+07 2.08849e+07 0.00449162 1.74583e+07 50.2023 0.00341783 0.995469 0 50.2076 GTEX-11P7K-0626-SM-5985Z 1 B1 2 pieces; 7.9 Prostate Prostate 0002367 114 1055 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.985526 248955 0.96837 0.989398 0.796575 24517 1 76 0.00294399 134 0 7.19049e+07 0.0313024 439882 7.26754e+07 1.45517e+07 24538 3.57335e+07 0 0.171796 0.989398 0.78813 7.19049e+07 0.00622134 1.57497e+07 8.18908e+06 1.56799e+07 156 1.57236e+07 1.11196e+07 0.00457625 1.59589e+07 50.3714 0.00605269 0.993271 0 49.889 GTEX-11P7K-0726-SM-5EGKX 0 B1 2 pieces; stromal fibrosis & ducts: gynecomastoid hyperplasia 8.4 Breast Breast - Mammary Tissue 0008367 123 1046 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.986742 264254 0.971088 0.990272 0.8112 24273 1 76 0.0020323 172 0 7.76591e+07 0.0285814 254516 7.8422e+07 6.98747e+06 24304 3.85868e+07 0 0.159889 0.990272 0.803308 7.76591e+07 0.00319376 1.69858e+07 7.403e+06 1.70792e+07 179 1.71124e+07 1.47749e+07 0.00261096 1.72149e+07 50.1494 0.00324547 0.993802 0 50.1371 GTEX-11P7K-0826-SM-5BC5F 0 B1 2 pieces 7.6 Adipose Tissue Adipose - Visceral (Omentum) 0010414 127 1042 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.98669 251743 0.97716 0.991511 0.832467 22675 1 76 0.00304384 162 0 7.64409e+07 0.0225745 888394 7.70954e+07 2.22021e+07 22695 3.79572e+07 0 0.144694 0.991511 0.8254 7.64409e+07 0.00518173 1.67758e+07 1.21892e+07 1.68185e+07 195 1.68295e+07 1.16685e+07 0.00410759 1.70899e+07 50.3838 0.0115233 0.996331 0 50.0635 GTEX-11P7K-1026-SM-5HL6Y 0 B1 2 pieces; spermatogenesis 6.9 Testis Testis 0000473 131 1038 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.991189 274973 0.940329 0.992999 0.732464 32048 1 76 0.00235582 140 0 7.31799e+07 0.0593694 601504 7.36958e+07 7.66309e+06 32105 3.64409e+07 0 0.207865 0.992999 0.727336 7.31799e+07 0.00318123 1.55172e+07 8.90658e+06 1.55778e+07 148 1.56052e+07 1.188e+07 0.00276777 1.561e+07 50.0077 0.00816198 0.994809 0 50.0975 GTEX-11P7K-1126-SM-5HL4L 0 B1 6 pieces; well trimmed 7.3 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 133 1036 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.990521 253046 0.974991 0.993039 0.835393 22049 1 76 0.00247481 157 0 5.83224e+07 0.0247798 587630 5.87313e+07 6.41803e+06 22061 2.89952e+07 0 0.139598 0.993039 0.829577 5.83224e+07 0.00390276 1.28099e+07 7.36094e+06 1.28915e+07 150 1.28351e+07 9.79567e+06 0.00318698 1.30072e+07 50.3329 0.0100054 0.995556 0 50.1589 GTEX-11P7K-1226-SM-5HL4X 0 B1 6 pieces; well dissected 7.4 Esophagus Esophagus - Muscularis 0004648 141 1028 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.991294 243333 0.975829 0.99345 0.862193 20939 1 76 0.00217397 152 0 6.56604e+07 0.023865 602769 6.60933e+07 6.92527e+06 20948 3.26824e+07 0 0.113636 0.99345 0.856545 6.56604e+07 0.0032684 1.41164e+07 8.10753e+06 1.42841e+07 161 1.41928e+07 1.23844e+07 0.00272 1.43442e+07 50.2654 0.00911997 0.995605 0 50.2952 GTEX-11P7K-1326-SM-5BC5G 0 B1 6 pieces 9.2 Esophagus Esophagus - Mucosa 0006920 141 1028 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.987495 247340 0.976415 0.990824 0.838784 21719 1 76 0.00304695 181 0 7.85212e+07 0.0229154 519103 7.92483e+07 2.1124e+07 21736 3.9032e+07 0 0.137631 0.990824 0.831088 7.85212e+07 0.00500981 1.76106e+07 1.5259e+07 1.76619e+07 173 1.76845e+07 1.62753e+07 0.00402508 1.78413e+07 50.2207 0.00655033 0.994153 0 50.0727 GTEX-11P7K-1426-SM-5EGKY 0 B1 6 pieces; 2 with submucosal glands on edge up to 2 x 0.5mm 8.4 Esophagus Esophagus - Gastroesophageal Junction 0004550 148 1021 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.989872 275171 0.977083 0.992961 0.839471 22373 1 76 0.00201941 279 0 8.51838e+07 0.0225942 652047 8.57876e+07 7.53895e+06 22393 4.23658e+07 0 0.137612 0.992961 0.833562 8.51838e+07 0.0030658 1.8449e+07 8.81148e+06 1.85939e+07 258 1.85832e+07 1.5154e+07 0.00254098 1.8702e+07 50.1592 0.00760071 0.99605 0 50.1956 GTEX-11P7K-1526-SM-5EGI7 1 B1 6 pieces; 2 without muscularis 9 Colon Colon - Transverse 0001157 149 1020 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.981999 198629 0.973551 0.987653 0.822009 23384 1 76 0.00314213 160 0 6.99702e+07 0.0253031 985747 7.08448e+07 1.12713e+07 23404 3.46738e+07 0 0.151542 0.987653 0.81186 6.99702e+07 0.00644892 1.5495e+07 1.12626e+07 1.53716e+07 164 1.54662e+07 1.12518e+07 0.00478606 1.57633e+07 50.4758 0.0139142 0.993308 0 49.8002 GTEX-11P7K-1626-SM-5GU63 1 B1 5 pieces; abundant lymphoid tissue [annotated]; well dissected, well preserved 8.5 Small Intestine Small Intestine - Terminal Ileum 0001211 158 1011 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4803,LCSET-5132 03/08/2014 TruSeq.v1 RNASEQ 0.988701 336411 0.96695 0.991173 0.776594 24698 1 76 0.00286721 170 0 7.91266e+07 0.0321167 445380 7.98313e+07 5.31282e+06 24730 3.93271e+07 0 0.190355 0.991173 0.769739 7.91266e+07 0.00391413 1.74809e+07 9.26966e+06 1.75681e+07 173 1.75662e+07 1.29857e+07 0.00338936 1.76676e+07 50.1438 0.00557902 0.993645 0 50.1245 GTEX-11P7K-1726-SM-5GU6F 1 B1 6 pieces; dilated deep glands (chief cell degeneration) 8.5 Stomach Stomach 0000945 160 1009 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.991317 307341 0.977871 0.993855 0.837033 21753 1 76 0.00198556 140 0 6.07089e+07 0.0218021 319435 6.10842e+07 4.23116e+06 21767 3.02032e+07 0 0.140838 0.993855 0.83189 6.07089e+07 0.00285697 1.32483e+07 4.93624e+06 1.33835e+07 147 1.33588e+07 1.10653e+07 0.00242015 1.3418e+07 50.1105 0.00522942 0.996394 0 50.254 GTEX-11P7K-1826-SM-5HL5A 1 B1 5 pieces 7.6 Colon Colon - Sigmoid 0001159 164 1005 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.991024 239006 0.978458 0.99352 0.861195 21537 1 76 0.00213202 179 0 7.32847e+07 0.0212103 423050 7.37627e+07 8.64944e+06 21551 3.6468e+07 0 0.117263 0.99352 0.855615 7.32847e+07 0.00328743 1.57978e+07 6.98901e+06 1.5985e+07 177 1.59503e+07 1.46216e+07 0.00270827 1.5999e+07 50.0763 0.00573529 0.996016 0 50.2946 GTEX-11P7K-1926-SM-5GU6R 0 B1 2 pieces 9 Muscle Muscle - Skeletal 0011907 346 823 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.991096 238960 0.984037 0.993819 0.878611 18974 1 76 0.00206813 141 0 6.57127e+07 0.0157215 464490 6.61214e+07 4.35626e+06 18977 3.27057e+07 0 0.105426 0.993819 0.873181 6.57127e+07 0.00281106 1.44307e+07 8.61838e+06 1.44765e+07 165 1.44313e+07 1.286e+07 0.00243858 1.46387e+07 50.3567 0.00702481 0.996542 0 50.0793 GTEX-11P7K-2026-SM-5GU74 0 B1 2 pieces; 20% fibrous content 7.7 Adipose Tissue Adipose - Subcutaneous 0002190 350 819 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4803,LCSET-5132 03/08/2014 TruSeq.v1 RNASEQ 0.989258 407587 0.975892 0.991781 0.811279 23206 1 76 0.0024604 213 0 8.86646e+07 0.023779 432534 8.93994e+07 5.99018e+06 23231 4.40973e+07 0 0.164613 0.991781 0.804611 8.86646e+07 0.00350015 1.95072e+07 9.72556e+06 1.95849e+07 218 1.95419e+07 1.5555e+07 0.00297895 1.9765e+07 50.2838 0.00483822 0.994303 0 50.0993 GTEX-11P7K-2126-SM-5GU7G 0 B1 6 pieces; well trimmed 6.8 Skin Skin - Sun Exposed (Lower leg) 0004264 351 818 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.98905 245393 0.969367 0.991975 0.780844 22777 1 76 0.00238161 136 0 5.54854e+07 0.0304341 499494 5.59342e+07 3.80011e+06 22796 2.757e+07 0 0.188523 0.991975 0.774577 5.54854e+07 0.00350299 1.21122e+07 5.8959e+06 1.21833e+07 138 1.21454e+07 8.08371e+06 0.00294064 1.23021e+07 50.3206 0.00893002 0.994899 0 50.1464 GTEX-11P7K-2226-SM-5GU56 0 B1 2 pieces; well trimmed except for internal 20% fatty connective tissue [annotated] 6.3 Nerve Nerve - Tibial 0001323 355 814 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.991219 195001 0.970477 0.993253 0.781165 23207 1 76 0.00207671 155 0 6.74477e+07 0.0292206 257420 6.79058e+07 4.0452e+06 23233 3.35525e+07 0 0.189312 0.993253 0.775894 6.74477e+07 0.00287728 1.48252e+07 5.69363e+06 1.49121e+07 156 1.48592e+07 1.12302e+07 0.00247618 1.50092e+07 50.251 0.00379084 0.995288 0 50.1461 GTEX-11P7K-2326-SM-5EGKZ 0 B1 2 pieces; well trimmed 7.5 Blood Vessel Artery - Tibial 0007610 362 807 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.98903 263335 0.97765 0.992272 0.868643 21315 1 76 0.00192163 171 0 7.65475e+07 0.0219668 393672 7.71437e+07 6.62892e+06 21325 3.80319e+07 0 0.109007 0.992272 0.86193 7.65475e+07 0.00320187 1.63522e+07 6.29196e+06 1.6472e+07 187 1.64355e+07 1.60676e+07 0.00255966 1.66226e+07 50.283 0.0051031 0.995514 0 50.1824 GTEX-11P81-0002-SM-58Q88 B1 Blood Whole Blood 0013756 1344 BP-40040 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/19/2013 LCSET-4574 01/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-11P81-0002-SM-5DWT1 B1 Blood Whole Blood 0013756 1344 BP-40040 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/19/2013 GTEx_OM25_Dec_01 01/29/2014 Illumina OMNI SNP Array OMNI GTEX-11P81-0002-SM-6WBTV B1 Blood Whole Blood 0013756 1344 BP-40040 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/19/2013 LCSET-6056,LCSET-6242 10/30/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-11P81-0006-SM-5NQ7A B1 8.6 Blood Whole Blood 0013756 1344 BP-39959 RNA isolation_PAXgene Blood RNA (Manual) 06/17/2013 LCSET-4906 03/22/2014 TruSeq.v1 RNASEQ 0.989191 555348 0.960959 0.990962 0.791137 18950 1 76 0.00221728 128 0 7.59048e+07 0.0385671 201434 7.65971e+07 6.57253e+06 18962 3.7803e+07 0 0.169822 0.990962 0.783986 7.59048e+07 0.00315013 1.6831e+07 5.71302e+07 1.71431e+07 145 1.71575e+07 1.65978e+07 0.00268287 1.69596e+07 49.71 0.00262979 0.992733 0 50.4593 GTEX-11P81-0008-SM-5S2OT B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 350 BP-45530 RNA isolation_Trizol Manual (Cell Pellet) 11/06/2013 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.99462 480640 0.976283 0.995906 0.862525 19587 1 76 0.00140464 151 0 7.21519e+07 0.0234357 220953 7.24485e+07 4.68296e+06 19599 3.59545e+07 0 0.113757 0.995906 0.858994 7.21519e+07 0.0020159 1.61936e+07 1.14505e+07 1.62506e+07 160 1.62421e+07 1.82812e+07 0.00170988 1.6304e+07 50.0951 0.00304979 0.997192 0 50.0878 GTEX-11P81-0126-SM-5HL5Y 1 B1 2 pieces, one is ~50% skeletal muscle, fat and fibrous tissue 6.8 Thyroid Thyroid 0002046 234 641 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.991188 244231 0.961974 0.993218 0.712517 23252 1 76 0.00207719 115 0 5.64295e+07 0.037775 170852 5.68148e+07 5.60958e+06 23289 2.80846e+07 0 0.249457 0.993218 0.707685 5.64295e+07 0.00312694 1.22925e+07 5.62418e+06 1.23849e+07 120 1.23995e+07 8.48989e+06 0.00260099 1.23856e+07 49.9721 0.00300717 0.995248 0 50.1871 GTEX-11P81-0226-SM-5HL5M 1 B1 2 pieces, hemosiderin-laden macrophages, some interstitial fibrosis and hypertrophy of mucin-secreting cells 7.5 Lung Lung 0008952 236 639 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.989308 292279 0.970463 0.992057 0.769663 25026 1 76 0.00227057 158 0 7.36584e+07 0.0288236 235606 7.42482e+07 8.86016e+06 25061 3.66219e+07 0 0.2008 0.992057 0.763549 7.36584e+07 0.00321793 1.62559e+07 9.34112e+06 1.64493e+07 165 1.64972e+07 1.25195e+07 0.00274294 1.64019e+07 49.8551 0.00317322 0.994805 0 50.2957 GTEX-11P81-0326-SM-5HL6B 1 B1 6 pieces, some attached adventitia/fat 7.7 Blood Vessel Artery - Aorta 0001496 239 636 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.990985 173638 0.974131 0.992937 0.84671 21131 1 76 0.00192763 146 0 6.64939e+07 0.0254068 211406 6.69669e+07 7.13237e+06 21141 3.31025e+07 0 0.127421 0.992937 0.84073 6.64939e+07 0.0029018 1.43052e+07 5.40697e+06 1.44191e+07 156 1.43988e+07 1.35872e+07 0.00241376 1.44475e+07 50.0845 0.00315687 0.994888 0 50.1982 GTEX-11P81-0526-SM-59873 0 B1 1 piece, c/w atrial appendage 8.3 Heart Heart - Atrial Appendage 0006631 243 632 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.986967 254345 0.979142 0.99073 0.830302 21826 1 76 0.00230697 266 0 8.3366e+07 0.0206552 2.29814e+06 8.4146e+07 1.67123e+07 21841 4.145e+07 0 0.148841 0.99073 0.822605 8.3366e+07 0.00568603 1.83384e+07 2.47766e+07 1.77638e+07 273 1.75823e+07 1.09646e+07 0.00399008 1.87612e+07 51.6219 0.0273113 0.994493 0 49.2042 GTEX-11P81-0726-SM-5PNYH 1 B1 2 pieces 7.9 Adipose Tissue Adipose - Visceral (Omentum) 0010414 255 620 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.991708 288923 0.974042 0.992723 0.816664 24237 1 76 0.0029805 273 0 9.45165e+07 0.0256031 786283 9.52094e+07 2.75456e+06 24267 4.70417e+07 0 0.157379 0.992723 0.81072 9.45165e+07 0.00355087 2.07785e+07 9.24319e+06 2.10146e+07 263 2.08882e+07 1.53972e+07 0.00326539 2.09971e+07 50.1301 0.00825846 0.993738 0 50.2824 GTEX-11P81-0826-SM-5P9GR 0 B1 4 pieces, includes few submucosal glands (marked) 9.4 Esophagus Esophagus - Mucosa 0006920 262 613 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4914 03/27/2014 TruSeq.v1 RNASEQ 0.991333 375690 0.978807 0.991787 0.843637 24224 1 76 0.00290989 390 0 1.48962e+08 0.0208034 682065 1.50195e+08 4.81541e+06 24254 7.42182e+07 0 0.13517 0.991787 0.836708 1.48962e+08 0.00343766 3.37446e+07 2.48309e+07 3.38982e+07 344 3.38378e+07 3.21857e+07 0.00317365 3.38766e+07 50.0287 0.00454119 0.992241 0 50.1136 GTEX-11P81-0926-SM-59874 1 B1 6 pieces, well trimmed 8.2 Esophagus Esophagus - Muscularis 0004648 260 615 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.98543 289980 0.977421 0.989975 0.844377 22237 1 76 0.00246379 211 0 8.47131e+07 0.0222627 917455 8.5571e+07 1.99411e+07 22249 4.20724e+07 0 0.133045 0.989975 0.835911 8.47131e+07 0.00585026 1.83008e+07 9.69789e+06 1.81822e+07 243 1.82727e+07 1.47161e+07 0.00414925 1.85514e+07 50.3784 0.0107216 0.994519 0 49.8375 GTEX-11P81-1026-SM-5GU54 1 B1 6 pieces, small focus of squamous mucosa, may not be present in block 7.8 Esophagus Esophagus - Gastroesophageal Junction 0004550 264 611 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.991535 280126 0.973589 0.993826 0.80036 21942 1 76 0.00179297 141 0 6.50906e+07 0.0261398 705581 6.54949e+07 4.16708e+06 21962 3.23882e+07 0 0.17323 0.993826 0.795418 6.50906e+07 0.00255917 1.41123e+07 6.27386e+06 1.42066e+07 158 1.41777e+07 1.05882e+07 0.00217519 1.42841e+07 50.1868 0.0107731 0.996117 0 50.1664 GTEX-11P81-1126-SM-5GU5G 1 B1 6 pieces, each containing muscularis and varying amounts of mucosa 8.2 Colon Colon - Transverse 0001157 268 607 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.989333 470815 0.97392 0.992635 0.807066 23340 1 76 0.00176529 207 0 8.19426e+07 0.0257683 589489 8.25506e+07 5.23621e+06 23367 4.0712e+07 0 0.166854 0.992635 0.801121 8.19426e+07 0.00278624 1.78324e+07 7.21546e+06 1.79326e+07 206 1.79411e+07 1.42129e+07 0.00227407 1.80784e+07 50.1906 0.00714094 0.995936 0 50.1401 GTEX-11P81-1326-SM-5GU5S 1 B1 2 pieces, congested 7.1 Spleen Spleen 0002106 278 597 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.988585 357036 0.963679 0.99153 0.790521 23137 1 76 0.00243764 130 0 6.01574e+07 0.0348629 358502 6.06713e+07 4.2066e+06 23156 2.98622e+07 0 0.173157 0.99153 0.783826 6.01574e+07 0.00330981 1.32181e+07 1.07416e+07 1.33078e+07 144 1.33303e+07 9.71708e+06 0.00287243 1.33691e+07 50.0727 0.00590892 0.994475 0 50.1691 GTEX-11P81-1426-SM-5P9JN 1 B1 7 pieces, predominantly muscularis (target) with few strips of mucosa (not target) 7.6 Colon Colon - Sigmoid 0001159 286 589 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4916 03/27/2014 TruSeq.v1 RNASEQ 0.992909 148306 0.979584 0.993495 0.867869 22235 1 76 0.00296859 289 0 8.87194e+07 0.0201103 725175 8.93003e+07 2.96769e+06 22247 4.42174e+07 0 0.111715 0.993495 0.862224 8.87194e+07 0.00327836 1.93e+07 8.31864e+06 1.94616e+07 263 1.93855e+07 1.72427e+07 0.00312339 1.94276e+07 50.0542 0.00812064 0.994082 0 50.2085 GTEX-11P81-1526-SM-5P9GS 0 B1 2 pieces 8.5 Ovary Ovary 0000992 282 593 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4914 03/27/2014 TruSeq.v1 RNASEQ 0.992432 386353 0.96934 0.992686 0.76189 25869 1 76 0.0028467 285 0 1.33332e+08 0.0303062 146073 1.34315e+08 4.34317e+06 25926 6.64e+07 0 0.20745 0.992686 0.756318 1.33332e+08 0.00331155 2.94362e+07 1.5954e+07 2.95697e+07 317 2.95502e+07 2.68872e+07 0.00307907 2.94981e+07 49.956 0.00108754 0.99294 0 50.1131 GTEX-11P81-1626-SM-5BC52 0 B1 2 pieces 8.3 Uterus Uterus 0000995 289 586 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.98798 354198 0.969173 0.991737 0.741092 23259 1 76 0.00269882 148 0 7.47169e+07 0.030501 145288 7.53394e+07 2.02985e+07 23292 3.71163e+07 0 0.22808 0.991737 0.734968 7.47169e+07 0.00463948 1.62279e+07 7.08051e+06 1.64267e+07 153 1.65133e+07 1.22958e+07 0.00366548 1.6408e+07 49.84 0.00192845 0.995493 0 50.3043 GTEX-11P81-1926-SM-5BC53 1 B1 2 pieces, 1 piece is predominantly fat with 5-10% fibrous component with ductal/lobular elements, 1 piece is entirely fat 7.6 Breast Breast - Mammary Tissue 0008367 311 564 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.98633 310226 0.968219 0.990453 0.76263 25019 1 76 0.00287269 146 0 7.19545e+07 0.0308634 425739 7.26481e+07 1.82588e+07 25050 3.57071e+07 0 0.205589 0.990453 0.75535 7.19545e+07 0.00507608 1.57673e+07 9.30568e+06 1.58432e+07 156 1.59271e+07 1.15894e+07 0.0039698 1.59617e+07 50.0542 0.00586029 0.994576 0 50.1201 GTEX-11P81-2026-SM-5P9GT 1 B1 3 pieces, excellent specimen, small detached fragment of squamous mucosa 8.2 Salivary Gland Minor Salivary Gland 0006330 315 560 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4914 03/27/2014 TruSeq.v1 RNASEQ 0.991089 300741 0.976271 0.991292 0.830747 24739 1 76 0.00293896 385 0 1.16572e+08 0.0229919 326926 1.17596e+08 3.76627e+06 24770 5.80383e+07 0 0.145525 0.991292 0.823513 1.16572e+08 0.00346529 2.62328e+07 2.31866e+07 2.63973e+07 334 2.63703e+07 2.2091e+07 0.00320207 2.62889e+07 49.9227 0.00278009 0.991496 0 50.1563 GTEX-11P81-2126-SM-5HL6N 1 B1 6 pieces 7.3 Vagina Vagina 0000996 337 538 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.989777 266261 0.970144 0.992469 0.748242 23724 1 76 0.00218222 148 0 7.28603e+07 0.0296113 171402 7.34132e+07 8.94601e+06 23754 3.62447e+07 0 0.221902 0.992469 0.742607 7.28603e+07 0.00317247 1.6165e+07 9.55415e+06 1.62828e+07 155 1.63202e+07 1.2648e+07 0.002676 1.63174e+07 49.9958 0.00233476 0.995161 0 50.1815 GTEX-11P81-2226-SM-5PNYI 0 B1 5 pieces, 3 of 5 include significant attached fat from 30-50% 7.1 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 337 538 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.991702 243238 0.971922 0.992586 0.812745 23625 1 76 0.00299053 228 0 8.79123e+07 0.0278894 704910 8.8569e+07 2.59011e+06 23658 4.3776e+07 0 0.159177 0.992586 0.806719 8.79123e+07 0.0035266 1.92968e+07 9.54225e+06 1.94533e+07 228 1.9343e+07 1.45576e+07 0.00325833 1.94882e+07 50.1869 0.00795888 0.99347 0 50.2019 GTEX-11P81-2326-SM-59875 0 B1 6 pieces, epidermis and dermis with 10-20% attached and internal fat, squamous epithelium measures 35-40 microns 8.4 Skin Skin - Sun Exposed (Lower leg) 0004264 350 525 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.983943 308695 0.968486 0.988876 0.795413 23947 1 76 0.0026484 180 0 7.32288e+07 0.031228 483540 7.40526e+07 1.70484e+07 23970 3.63511e+07 0 0.173073 0.988876 0.786564 7.32288e+07 0.00658875 1.58466e+07 1.16142e+07 1.5927e+07 158 1.60521e+07 1.29321e+07 0.00460874 1.60588e+07 50.0104 0.00652968 0.993809 0 50.1265 GTEX-11P81-2426-SM-5GU65 0 B1 2 pieces 7.4 Adipose Tissue Adipose - Subcutaneous 0002190 345 530 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4803,LCSET-5132 03/08/2014 TruSeq.v1 RNASEQ 0.990629 407861 0.972064 0.992883 0.781999 23882 1 76 0.0021667 173 0 8.12373e+07 0.0276293 508332 8.18196e+07 5.48756e+06 23913 4.03898e+07 0 0.190065 0.992883 0.776433 8.12373e+07 0.00320876 1.78379e+07 7.64624e+06 1.79188e+07 195 1.78842e+07 1.3328e+07 0.00268655 1.8046e+07 50.2251 0.00621284 0.995137 0 50.113 GTEX-11P81-2526-SM-5GU6H 1 B1 2 pieces, one piece includes small portion of internal fat 8 Muscle Muscle - Skeletal 0011907 348 527 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.990997 238344 0.9843 0.993848 0.878962 18575 1 76 0.00156478 126 0 5.66209e+07 0.0154892 598945 5.69714e+07 3.62999e+06 18580 2.81699e+07 0 0.105338 0.993848 0.873555 5.66209e+07 0.00245247 1.23192e+07 7.17143e+06 1.24387e+07 144 1.23932e+07 1.11413e+07 0.00200735 1.2514e+07 50.2425 0.0105131 0.9967 0 50.2413 GTEX-11P81-2626-SM-5GU6T 0 B1 2 pieces, well trimmed 7.6 Nerve Nerve - Tibial 0001323 361 514 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.990308 241890 0.966261 0.992956 0.753954 22878 1 76 0.00193018 136 0 5.54561e+07 0.0334265 187893 5.58495e+07 3.51152e+06 22902 2.75718e+07 0 0.212307 0.992956 0.748643 5.54561e+07 0.00284153 1.21717e+07 4.67632e+06 1.2254e+07 128 1.22512e+07 8.98656e+06 0.00238464 1.23159e+07 50.1317 0.00336427 0.995603 0 50.1683 GTEX-11P81-2726-SM-59876 1 B1 2 pieces, well trimmed 6.6 Blood Vessel Artery - Tibial 0007610 362 513 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.983389 214152 0.975693 0.988722 0.841121 21319 1 76 0.00251998 145 0 6.87781e+07 0.0239052 535318 6.95626e+07 1.4071e+07 21327 3.41181e+07 0 0.134572 0.988722 0.831635 6.87781e+07 0.00688584 1.4705e+07 6.3929e+06 1.48514e+07 153 1.49316e+07 1.32997e+07 0.00469114 1.49643e+07 50.0548 0.00769549 0.994055 0 50.2477 GTEX-11P82-0003-SM-58Q7E B1 Blood Whole Blood 0013756 -114 BP-40040 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/19/2013 LCSET-4574 01/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-11P82-0003-SM-5DWRC B1 Blood Whole Blood 0013756 -114 BP-40040 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/19/2013 GTEx_OM25_Dec_01 01/29/2014 Illumina OMNI SNP Array OMNI GTEX-11P82-0003-SM-6WBSX B1 Blood Whole Blood 0013756 -114 BP-40040 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/19/2013 LCSET-6056 09/21/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-11P82-0006-SM-5N9FY B1 8.7 Blood Whole Blood 0013756 -114 BP-39959 RNA isolation_PAXgene Blood RNA (Manual) 06/17/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.986786 1.04779e+06 0.958623 0.988511 0.802044 19880 1 76 0.00444814 159 0 9.77415e+07 0.0407767 447300 9.88775e+07 4.86094e+06 19894 4.85803e+07 0 0.156579 0.988511 0.79283 9.77415e+07 0.00454314 2.17309e+07 7.58694e+07 2.1952e+07 181 2.19683e+07 2.16882e+07 0.00449556 2.18994e+07 49.9214 0.00452378 0.990237 0 50.2531 GTEX-11P82-0008-SM-5S2MS B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 202 BP-45530 RNA isolation_Trizol Manual (Cell Pellet) 11/06/2013 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.992123 453745 0.96716 0.993965 0.858632 20290 1 76 0.00155707 162 0 6.79797e+07 0.0326001 258099 6.83924e+07 4.9821e+06 20301 3.38394e+07 0 0.108528 0.993965 0.85345 6.79797e+07 0.00231512 1.47892e+07 1.40642e+07 1.50339e+07 171 1.49666e+07 1.37831e+07 0.00193539 1.49906e+07 50.04 0.0037738 0.995807 0 50.4103 GTEX-11P82-0126-SM-5HL72 1 B1 6 pieces adherent serosa/fibrous tissue up to 2mm; rep delineated 7.3 Blood Vessel Artery - Aorta 0001496 126 919 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.992693 189397 0.97548 0.994594 0.84286 21128 1 76 0.00191395 160 0 6.93566e+07 0.0241962 247961 6.97336e+07 7.75712e+06 21141 3.45364e+07 0 0.132621 0.994594 0.838303 6.93566e+07 0.00280518 1.49729e+07 5.30054e+06 1.51308e+07 175 1.50882e+07 1.26413e+07 0.00235871 1.51411e+07 50.0874 0.00355583 0.996495 0 50.2622 GTEX-11P82-0226-SM-5HL4O 1 B1 2 pieces; incidental 3.5mm perithyroidal lymph node encircled; 2.5mm nubbin of attached fat delineated; thyroid unremarkable 6.1 Thyroid Thyroid 0002046 128 918 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.993146 169230 0.969618 0.994822 0.783204 23974 1 76 0.00196854 201 0 7.60267e+07 0.0301302 492016 7.64224e+07 7.64228e+06 24008 3.7875e+07 0 0.186414 0.994822 0.779149 7.60267e+07 0.00279069 1.65743e+07 8.29797e+06 1.67811e+07 203 1.66932e+07 1.11132e+07 0.00237892 1.67791e+07 50.1283 0.00643811 0.996498 0 50.31 GTEX-11P82-0326-SM-5HL51 1 B1 2 pieces, ~15-20% fibrovascular tissue, rep foci delineated; nodule of reactive calcification, unknown significance, ensquared 7.5 Adipose Tissue Adipose - Visceral (Omentum) 0010414 131 915 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.99285 210163 0.979517 0.994667 0.839139 21106 1 76 0.00195988 161 0 6.68341e+07 0.0202624 556290 6.71924e+07 6.98563e+06 21119 3.32919e+07 0 0.140378 0.994667 0.834663 6.68341e+07 0.00283819 1.471e+07 9.31772e+06 1.48392e+07 182 1.47501e+07 1.07335e+07 0.00239823 1.49136e+07 50.2756 0.00827906 0.996484 0 50.2186 GTEX-11P82-0426-SM-5HL5D 1 B1 6 pieces, muscularis; attached nubbins of fat/fibrous tissue up to~2.5mm, rep delineated 7.7 Esophagus Esophagus - Gastroesophageal Junction 0004550 138 909 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.991985 250342 0.975371 0.993893 0.827906 22387 1 76 0.00199128 206 0 8.38371e+07 0.0243693 577296 8.43522e+07 8.89228e+06 22405 4.17467e+07 0 0.147465 0.993893 0.82285 8.38371e+07 0.00296985 1.79406e+07 8.87958e+06 1.81796e+07 256 1.80255e+07 1.3848e+07 0.00247962 1.82493e+07 50.3085 0.00684387 0.995801 0 50.3307 GTEX-11P82-0526-SM-5986P 1 B1 6 pieces; squamous mucosa well preserved, up to~0.5mm thick 9 Esophagus Esophagus - Mucosa 0006920 147 901 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.985386 233228 0.977062 0.989391 0.839371 21595 1 76 0.00258775 137 0 6.72254e+07 0.0225638 421680 6.79462e+07 1.40011e+07 21609 3.34077e+07 0 0.13769 0.989391 0.830467 6.72254e+07 0.00621717 1.51746e+07 1.07894e+07 1.51411e+07 150 1.5189e+07 1.2962e+07 0.00439511 1.53845e+07 50.3197 0.00620609 0.993396 0 49.9448 GTEX-11P82-0626-SM-5PNYK 1 B1 6 pieces, all muscularis, good specimens 7.9 Esophagus Esophagus - Muscularis 0004648 149 900 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.992469 189079 0.977335 0.993235 0.838169 22631 1 76 0.00298046 275 0 9.73253e+07 0.0224073 626248 9.79881e+07 2.89301e+06 22650 4.84852e+07 0 0.139166 0.993235 0.832499 9.73253e+07 0.00329806 2.09307e+07 9.05207e+06 2.13146e+07 283 2.11218e+07 1.66545e+07 0.00313913 2.119e+07 50.0806 0.00639106 0.994001 0 50.4544 GTEX-11P82-0726-SM-5PNYL 1 B1 6 pieces, all muscularis save for residual ~2mm focus of mucosa; rest is sloughed 7.5 Stomach Stomach 0000945 161 889 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.992782 201063 0.976497 0.993369 0.82236 22823 1 76 0.00301061 209 0 8.52733e+07 0.0232375 564314 8.58425e+07 2.40307e+06 22847 4.24891e+07 0 0.154137 0.993369 0.816907 8.52733e+07 0.00342279 1.87105e+07 8.82280e+06 1.89464e+07 237 1.88131e+07 1.38227e+07 0.00321658 1.88931e+07 50.1061 0.00657383 0.993956 0 50.3132 GTEX-11P82-0826-SM-5P9GU 1 B1 6 pieces, well preserved, excellent specimens, ~50% lymphoid aggregates, rep areas delineated 8.4 Small Intestine Small Intestine - Terminal Ileum 0001211 165 886 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4914 03/27/2014 TruSeq.v1 RNASEQ 0.990597 350857 0.968792 0.991067 0.778816 26400 1 76 0.00324119 380 0 1.33698e+08 0.0305375 748316 1.34903e+08 4.61411e+06 26453 6.65332e+07 0 0.189976 0.991067 0.771859 1.33698e+08 0.00388569 2.93746e+07 1.92329e+07 2.98121e+07 351 2.96228e+07 2.21898e+07 0.00356329 2.96278e+07 50.0043 0.00554705 0.991536 0 50.3696 GTEX-11P82-0926-SM-5986X 0 B1 3 pieces, well preserived sero-mucinous glands are 100% of specimen; excellent. 9.2 Salivary Gland Minor Salivary Gland 0006330 164 888 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.98122 313581 0.975524 0.985549 0.811741 23841 1 76 0.00295815 212 0 8.22619e+07 0.0236728 187983 8.34681e+07 1.87585e+07 23868 4.08358e+07 0 0.163783 0.985549 0.80001 8.22619e+07 0.00638027 1.87244e+07 2.35988e+07 1.84516e+07 213 1.85403e+07 1.38239e+07 0.0046617 1.89765e+07 50.5814 0.00225215 0.989877 0 49.633 GTEX-11P82-1026-SM-5BC5J 1 B1 6 pieces, mucosa is ~0.3mm thick, ~ 5% thickness 7.2 Colon Colon - Transverse 0001157 168 884 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.984434 300883 0.975236 0.989698 0.812535 22185 1 76 0.00299572 145 0 6.23205e+07 0.0234201 1.37208e+06 6.29692e+07 1.49856e+07 22204 3.08703e+07 0 0.162701 0.989698 0.804164 6.23205e+07 0.00578366 1.38715e+07 1.09854e+07 1.3861e+07 160 1.38374e+07 8.24152e+06 0.00438228 1.4194e+07 50.6362 0.0217897 0.994962 0 49.9811 GTEX-11P82-1126-SM-5BC5K 1 B1 2 pieces, well-preserved glandular elements, no abnormalities 7.2 Prostate Prostate 0002367 171 882 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.987794 265548 0.965627 0.991813 0.760818 24322 1 76 0.00276599 132 0 6.64825e+07 0.0341213 305500 6.70313e+07 1.92688e+07 24353 3.30257e+07 0 0.204809 0.991813 0.754589 6.64825e+07 0.00493687 1.44702e+07 7.81721e+06 1.46381e+07 151 1.46347e+07 9.16029e+06 0.00384703 1.47241e+07 50.1523 0.00455757 0.995833 0 50.2883 GTEX-11P82-1226-SM-5HL5P 1 B1 2 pieces, ~20% adherent serosa/fat, delineated 7 Colon Colon - Sigmoid 0001159 175 878 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4806 03/02/2014 TruSeq.v1 EXCLUDE 0.991706 219366 0.978991 0.993655 0.816854 21828 1 76 0.00203134 136 0 6.34757e+07 0.020747 382907 6.38811e+07 6.81878e+06 21846 3.16049e+07 0 0.162136 0.993655 0.811671 6.34757e+07 0.00295799 1.39731e+07 6.10786e+06 1.40903e+07 157 1.40346e+07 1.0408e+07 0.00249376 1.41464e+07 50.1983 0.00599406 0.995605 0 50.2089 GTEX-11P82-1326-SM-5HL62 0 B1 2 pieces, fibroadipose tissue, no ductal elements seen 7.5 Breast Breast - Mammary Tissue 0008367 182 872 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.99218 206544 0.981737 0.994078 0.835862 20241 1 76 0.00200061 202 0 7.11667e+07 0.0180455 668302 7.15906e+07 7.60472e+06 20255 3.54492e+07 0 0.145875 0.994078 0.830912 7.11667e+07 0.00294491 1.56457e+07 1.19532e+07 1.57914e+07 203 1.5714e+07 1.18052e+07 0.00247186 1.58518e+07 50.2183 0.00933505 0.995975 0 50.2317 GTEX-11P82-1426-SM-5BC5L 0 B1 6 pieces, squamous epithelium is ~60 microns, trace adherent dermal fat, delineated 7.8 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 185 870 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4455 01/18/2014 TruSeq.v1 EXCLUDE 0.98669 508744 0.96769 0.991224 0.800179 22983 1 76 0.00272672 175 0 7.43483e+07 0.0320213 546822 7.50066e+07 1.91573e+07 23006 3.68989e+07 0 0.167511 0.991224 0.793157 7.43483e+07 0.0055977 1.61123e+07 1.49456e+07 1.6263e+07 168 1.63056e+07 1.26948e+07 0.00415565 1.64027e+07 50.1483 0.00729032 0.995758 0 50.2327 GTEX-11P82-1426-SM-DTXFY 0 B1 6 pieces, squamous epithelium is ~60 microns, trace adherent dermal fat, delineated 7.4 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 185 870 BP-80997 RNA Extraction from Paxgene-derived Lysate Plate Based 11/29/2016 LCSET-10503 03/19/2017 TruSeq.v1 RNASEQ 0.993439 775345 0.971399 0.994396 0.800467 23780 1 76 0.00207832 227 0 9.16048e+07 0.0283587 674943 9.21211e+07 5.02194e+06 23814 4.56254e+07 0 0.170932 0.994396 0.795981 9.16048e+07 0.00249696 2.01104e+07 1.06958e+07 2.02795e+07 232 2.03348e+07 1.54828e+07 0.00228743 2.01405e+07 49.76 0.0073267 0.995352 0 50.2094 GTEX-11P82-1526-SM-5BC5M 0 B1 2 pieces, spermatogenesis is present 6.7 Testis Testis 0000473 186 870 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.986102 361120 0.933013 0.990461 0.751283 32284 1 76 0.002774 148 0 7.41588e+07 0.0667263 1.51861e+06 7.4873e+07 2.09396e+07 32333 3.68341e+07 0 0.18173 0.990461 0.744117 7.41588e+07 0.00485468 1.54469e+07 1.14915e+07 1.55155e+07 158 1.55837e+07 1.11334e+07 0.00380976 1.56617e+07 50.1249 0.0202825 0.994821 0 50.1107 GTEX-11P82-1626-SM-59879 0 B1 6 pieces squamous epithelium is ~50-60 microns; nubbins of adherent dermal fat up to ~2mm, delineated 6.2 Skin Skin - Sun Exposed (Lower leg) 0004264 194 862 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.983254 252589 0.9752 0.98836 0.811627 24062 1 76 0.00269583 216 0 8.38077e+07 0.024572 824449 8.47947e+07 2.06165e+07 24090 4.15988e+07 0 0.163573 0.98836 0.80218 8.38077e+07 0.00614683 1.84302e+07 1.0632e+07 1.84586e+07 219 1.85249e+07 1.30497e+07 0.00441241 1.87607e+07 50.3162 0.00972288 0.993466 0 50.0384 GTEX-11P82-1726-SM-5Q5AT 0 B1 2 pieces, ~30% fibrous/fascial tissue, delineated 7.6 Adipose Tissue Adipose - Subcutaneous 0002190 195 862 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.990824 158870 0.980717 0.992801 0.848977 21979 1 76 0.00172703 205 0 7.57512e+07 0.0190057 364974 7.63005e+07 5.97396e+06 21997 3.77192e+07 0 0.13174 0.992801 0.842865 7.57512e+07 0.00259514 1.66992e+07 7.61512e+06 1.68463e+07 206 1.6805e+07 1.44107e+07 0.00216022 1.68891e+07 50.1248 0.00478338 0.994778 0 50.2193 GTEX-11P82-1826-SM-5PNYJ 0 B1 2 pieces, trace interstitial fat 7.6 Muscle Muscle - Skeletal 0011907 197 860 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.993644 265889 0.983947 0.994329 0.872543 20422 1 76 0.0028955 376 0 1.15209e+08 0.0158558 1.22479e+06 1.15867e+08 3.06638e+06 20434 5.7433e+07 0 0.111405 0.994329 0.867594 1.15209e+08 0.00328101 2.53404e+07 1.82187e+07 2.57543e+07 338 2.54808e+07 2.09762e+07 0.00308812 2.56842e+07 50.1987 0.0105707 0.995014 0 50.405 GTEX-11P82-1926-SM-5Q5AU 0 B1 2 pieces, clean specimens 5.7 Nerve Nerve - Tibial 0001323 198 860 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.986107 170621 0.971465 0.988282 0.80269 23502 1 76 0.0018869 169 0 7.49326e+07 0.0282909 582765 7.58211e+07 6.02148e+06 23529 3.72535e+07 0 0.168775 0.988282 0.793284 7.49326e+07 0.00290913 1.64696e+07 8.86373e+06 1.65517e+07 196 1.64406e+07 1.13767e+07 0.00239689 1.67378e+07 50.4479 0.00768606 0.990457 0 50.1242 GTEX-11PRG-0004-SM-58Q9A C1 Blood Whole Blood 0013756 627 BP-40040 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/19/2013 LCSET-4574 01/20/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-11PRG-0004-SM-5DWRB C1 Blood Whole Blood 0013756 627 BP-40040 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/19/2013 GTEx_OM25_Dec_01 01/29/2014 Illumina OMNI SNP Array OMNI GTEX-11PRG-0004-SM-6WBUN C1 Blood Whole Blood 0013756 627 BP-40040 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/19/2013 LCSET-6056 09/21/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-11PRG-0005-SM-5NQ6X C1 8.6 Blood Whole Blood 0013756 627 BP-40083 RNA isolation_PAXgene Blood RNA (Manual) 06/21/2013 LCSET-4906 03/22/2014 TruSeq.v1 RNASEQ 0.944977 649725 0.966367 0.946599 0.78483 16996 1 76 0.00187171 87 0 8.65373e+07 0.031553 71068 9.14192e+07 7.91096e+06 17002 4.30208e+07 0 0.181537 0.946599 0.742919 8.65373e+07 0.00323027 2.00678e+07 1.85508e+08 2.05623e+07 125 2.04605e+07 2.44862e+07 0.00254982 2.0315e+07 49.8216 0.000777386 0.94822 0 50.6086 GTEX-11PRG-0008-SM-5S2N5 C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 845 BP-45530 RNA isolation_Trizol Manual (Cell Pellet) 11/06/2013 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.994507 377109 0.969297 0.995771 0.864015 19644 1 76 0.00164074 143 0 6.37792e+07 0.0304892 276789 6.40501e+07 4.48886e+06 19653 3.17853e+07 0 0.105282 0.995771 0.860361 6.37792e+07 0.00231675 1.39096e+07 1.29034e+07 1.41225e+07 152 1.40558e+07 1.41551e+07 0.00197832 1.40689e+07 50.0232 0.00432145 0.997036 0 50.3797 GTEX-11PRG-0011-R10a-SM-AHZML C1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 644 ChIP-Seq GTEX-11PRG-0011-R10b-SM-CYKQG C1, A1 7.7 Brain Brain - Frontal Cortex (BA9) 0009834 644 BP-43067 RNA isolation_PAXgene Tissue miRNA 09/04/2013 RIP-Seq GTEX-11PRG-0011-R10b-SM-DO93G C1, A1 7.7 Brain Brain - Frontal Cortex (BA9) 0009834 644 BP-43067 RNA isolation_PAXgene Tissue miRNA 09/04/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.995482 563488 0.96402 0.996233 0.851189 23524 1 76 0.00234185 269 0 8.20266e+07 0.0353485 3.15965e+06 8.23367e+07 4.69789e+06 23544 4.08816e+07 0 0.112831 0.996233 0.847983 8.20266e+07 0.002846 1.79616e+07 1.22722e+07 1.80823e+07 274 1.80681e+07 1.16014e+07 0.00259374 1.80282e+07 49.9446 0.0383747 0.996985 0 50.1674 GTEX-11PRG-0011-R11b-SM-DNZZY C1, A1 8.4 Brain Brain - Cerebellar Hemisphere 0002037 644 BP-43067 RNA isolation_PAXgene Tissue miRNA 09/04/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.985901 941144 0.948443 0.990194 0.751132 24933 1 76 0.00290603 273 0 1.14635e+08 0.0510556 1.82734e+06 1.1577e+08 1.25978e+07 24983 5.68813e+07 0 0.197311 0.990194 0.743766 1.14635e+08 0.0048071 2.46482e+07 1.85349e+07 2.48053e+07 291 2.50344e+07 1.51336e+07 0.00385245 2.48584e+07 49.8236 0.0157842 0.994487 0 50.1589 GTEX-11PRG-0011-R2a-SM-69LQ5 C1, A1 6 Brain Brain - Substantia nigra 0002038 644 BP-49920 RNA isolation_PAXgene Tissue miRNA 02/27/2014 LCSET-5451 06/26/2014 TruSeq.v1 RNASEQ 0.992538 431908 0.963932 0.994327 0.859855 20901 1 76 0.00303656 162 0 6.18264e+07 0.035907 6.1873e+06 6.21791e+07 3.61568e+06 20911 3.07859e+07 0 0.104077 0.994327 0.854977 6.18264e+07 0.0040064 1.36144e+07 1.8881e+07 1.36769e+07 195 1.34202e+07 4.71638e+06 0.00352061 1.39788e+07 51.0193 0.0995077 0.996117 0 50.1145 GTEX-11PRG-0011-R4a-SM-DNZZR C1, A1 7.6 Brain Brain - Amygdala 0001876 644 BP-43065 RNA isolation_PAXgene Tissue miRNA 09/04/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.987716 754079 0.963427 0.991933 0.859708 24335 1 76 0.00297628 375 0 1.0749e+08 0.0361894 8.4858e+06 1.08364e+08 9.71239e+06 24355 5.3382e+07 0 0.103719 0.991933 0.852773 1.0749e+08 0.0055369 2.33747e+07 2.33528e+07 2.37533e+07 338 2.38464e+07 1.26665e+07 0.00425115 2.36736e+07 49.8182 0.0783083 0.99615 0 50.4017 GTEX-11PRG-0011-R5b-SM-DNZZS C1, A1 7.1 Brain Brain - Caudate (basal ganglia) 0001873 644 BP-43065 RNA isolation_PAXgene Tissue miRNA 09/04/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.988483 675603 0.963312 0.992339 0.861153 24042 1 76 0.00310517 272 0 1.00512e+08 0.0363228 6.61231e+06 1.01288e+08 1.05384e+07 24058 4.99342e+07 0 0.102159 0.992339 0.854555 1.00512e+08 0.00497996 2.17782e+07 2.14302e+07 2.21833e+07 314 2.22446e+07 1.21269e+07 0.00403893 2.20498e+07 49.7801 0.0652824 0.996194 0 50.4607 GTEX-11PRG-0011-R6b-SM-DO923 C1, A1 6 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 644 BP-43065 RNA isolation_PAXgene Tissue miRNA 09/04/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.995218 624876 0.966477 0.995919 0.856932 23783 1 76 0.00275912 376 0 9.68862e+07 0.0332035 8.85782e+06 9.72832e+07 5.01558e+06 23801 4.83003e+07 0 0.109545 0.995919 0.853435 9.68862e+07 0.00301967 2.11275e+07 1.94249e+07 2.1615e+07 335 2.14859e+07 1.16072e+07 0.0028893 2.13143e+07 49.7996 0.0910518 0.996621 0 50.5702 GTEX-11PRG-0011-R7a-SM-DNZZT C1, A1 8.1 Brain Brain - Putamen (basal ganglia) 0001874 644 BP-43065 RNA isolation_PAXgene Tissue miRNA 09/04/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.988609 769639 0.958422 0.992509 0.860164 23698 1 76 0.00294763 272 0 1.01948e+08 0.0412654 6.5015e+06 1.02718e+08 1.02486e+07 23716 5.06626e+07 0 0.0982574 0.992509 0.853721 1.01948e+08 0.00500277 2.20142e+07 2.68281e+07 2.2417e+07 304 2.24224e+07 1.2044e+07 0.00397116 2.23527e+07 49.9222 0.063295 0.996409 0 50.4533 GTEX-11PRG-0126-SM-5BC55 0 C1 2 pieces; nubbins of adherent fat up to ~1mm, delineated 6.1 Nerve Nerve - Tibial 0001323 831 883 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.983396 244646 0.957984 0.988621 0.689872 24269 1 76 0.00307446 143 0 6.24021e+07 0.0417979 292869 6.31204e+07 1.73068e+07 24311 3.09305e+07 0 0.268111 0.988621 0.682023 6.24021e+07 0.00581989 1.34852e+07 7.73692e+06 1.36495e+07 135 1.37122e+07 7.56727e+06 0.00443992 1.37323e+07 50.0367 0.00463985 0.993846 0 50.3028 GTEX-11PRG-0326-SM-5GU53 0 C1 2 pieces, ~20% interstitial fat, rep. delineated 7.7 Muscle Muscle - Skeletal 0011907 837 878 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.991665 338185 0.981925 0.994199 0.860763 20051 1 76 0.00206887 123 0 6.56687e+07 0.0178256 652457 6.60519e+07 4.36676e+06 20062 3.2674e+07 0 0.121163 0.994199 0.855769 6.56687e+07 0.00292321 1.40712e+07 6.20414e+06 1.41612e+07 142 1.41576e+07 1.39449e+07 0.00249495 1.42239e+07 50.1169 0.00987795 0.996732 0 50.1594 GTEX-11PRG-0626-SM-5BC56 0 C1 2 pieces, ~40% fibrous/fascial tissue, delineated 6.8 Adipose Tissue Adipose - Subcutaneous 0002190 846 870 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.987485 245256 0.973023 0.991397 0.765319 23499 1 76 0.00293989 135 0 6.62724e+07 0.0266709 278731 6.68475e+07 1.65879e+07 23531 3.29153e+07 0 0.207704 0.991397 0.758735 6.62724e+07 0.00523141 1.44902e+07 7.24496e+06 1.46198e+07 143 1.46775e+07 1.08132e+07 0.00408113 1.46796e+07 50.0035 0.00416966 0.995309 0 50.2226 GTEX-11PRG-0726-SM-5EGL1 0 C1 6 pieces, squamous epithelium is ~40-50microns; trace nubbin adherent dermal fat 6.1 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 849 868 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.986118 227978 0.970079 0.989957 0.747747 23096 1 76 0.00243998 158 0 7.58393e+07 0.0297224 511672 7.66088e+07 6.67656e+06 23130 3.76453e+07 0 0.222332 0.989957 0.740237 7.58393e+07 0.00374049 1.66127e+07 1.06361e+07 1.67265e+07 171 1.67251e+07 1.03303e+07 0.00308771 1.68869e+07 50.2407 0.00667903 0.993795 0 50.1706 GTEX-11PRG-0826-SM-5EQ6A 1 C1 2 pieces, gynecomastoid stromal/ductal hyperplasia; stroma encircled, rep ducts delineated 7 Breast Breast - Mammary Tissue 0008367 852 865 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.98917 359175 0.969699 0.992115 0.744921 24451 1 76 0.00234688 141 0 6.98187e+07 0.0300172 239779 7.03735e+07 8.34961e+06 24485 3.46724e+07 0 0.224777 0.992115 0.739048 6.98187e+07 0.00357657 1.53295e+07 7.48941e+06 1.54549e+07 151 1.54547e+07 1.13199e+07 0.0029599 1.55258e+07 50.1147 0.00340723 0.995061 0 50.2036 GTEX-11PRG-0926-SM-5EGI8 2 C1 2 pieces, moderate congestion/edema 5.8 Lung Lung 0008952 854 864 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.980036 222764 0.969003 0.985433 0.807593 23940 1 76 0.00278925 139 0 7.00468e+07 0.0306667 538690 7.10823e+07 1.07875e+07 23960 3.47283e+07 0 0.161409 0.985433 0.795829 7.00468e+07 0.00621948 1.52454e+07 7.68063e+06 1.54598e+07 160 1.55397e+07 1.1202e+07 0.00449497 1.55251e+07 49.9764 0.0075784 0.990829 0 50.3492 GTEX-11PRG-1526-SM-5HL6Z 1 C1 2 pieces, no abnormalities; minimal fibrosis 5.9 Adipose Tissue Adipose - Visceral (Omentum) 0010414 886 835 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.988337 190187 0.976997 0.990529 0.82638 22464 1 76 0.00231603 140 0 6.04825e+07 0.0226756 244285 6.10608e+07 6.51952e+06 22482 3.00784e+07 0 0.150617 0.990529 0.818553 6.04825e+07 0.00352015 1.3318e+07 7.19741e+06 1.34084e+07 147 1.33802e+07 1.1072e+07 0.00291676 1.34796e+07 50.1851 0.00400069 0.992721 0 50.169 GTEX-11PRG-2026-SM-5GU5F 1 C1 6 pieces, musularis and serosa 5.8 Colon Colon - Sigmoid 0001159 902 823 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.988904 207208 0.973803 0.9917 0.786352 22913 1 76 0.00232871 134 0 6.27688e+07 0.0258836 658747 6.32941e+07 4.19642e+06 22932 3.11782e+07 0 0.187451 0.9917 0.779825 6.27688e+07 0.00323552 1.36886e+07 6.91122e+06 1.37793e+07 148 1.37391e+07 9.47132e+06 0.00278083 1.38988e+07 50.289 0.0104077 0.994497 0 50.1651 GTEX-11PRG-2226-SM-5GU5R 3 C1 6 pieces, appears completely infarcted/autolyzed, ? end stage renal dz; specimen sequenced and fingerprint confirmed as match to other donor specimens 6 Kidney Kidney - Cortex 0001225 931 795 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4803 02/19/2014 TruSeq.v1 EXCLUDE 0.970007 345827 0.968241 0.972983 0.779699 23365 1 76 0.0062501 276 0 1.16362e+08 0.0175968 289141 1.19593e+08 7.7377e+06 23396 5.68667e+07 0 0.188542 0.972983 0.758634 1.16362e+08 0.00716905 2.67576e+07 7.77294e+07 2.67888e+07 310 2.70756e+07 1.54173e+07 0.00670817 2.68321e+07 49.7742 0.00241771 0.975959 0 50.0292 GTEX-11PRG-2826-SM-5BC54 1 C1 4 pieces, no abnormalities 6.7 Brain Brain - Cerebellum 0002037 995 737 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.987248 277171 0.946648 0.991288 0.715554 23509 1 76 0.00318115 123 0 6.68678e+07 0.0530425 1.16184e+06 6.74555e+07 1.56626e+07 23532 3.32085e+07 0 0.231095 0.991288 0.70932 6.68678e+07 0.00551406 1.43449e+07 1.11026e+07 1.44781e+07 142 1.45441e+07 7.46602e+06 0.00434285 1.45267e+07 49.97 0.0172238 0.995327 0 50.2312 GTEX-11PRG-2926-SM-5987A 1 C1 4 pieces, no abnormalities 5.9 Brain Brain - Cortex 0001870 996 736 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.987167 343199 0.966858 0.991104 0.844037 23335 1 76 0.00332179 151 0 7.34738e+07 0.0327254 2.79431e+06 7.41333e+07 1.50653e+07 23352 3.65098e+07 0 0.122821 0.991104 0.836528 7.34738e+07 0.0067022 1.62952e+07 1.4676e+07 1.59607e+07 197 1.59587e+07 8.86991e+06 0.00500528 1.65503e+07 50.91 0.0376931 0.99504 0 49.4814 GTEX-11TT1-0001-SM-58Q8E B1 Blood Whole Blood 0013756 -59 BP-40136 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/25/2013 LCSET-4574 01/20/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-11TT1-0001-SM-5DWT7 B1 Blood Whole Blood 0013756 -59 BP-40136 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/25/2013 GTEx_OM25_Dec_01 01/29/2014 Illumina OMNI SNP Array OMNI GTEX-11TT1-0001-SM-6WBTZ B1 Blood Whole Blood 0013756 -59 BP-40136 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/25/2013 LCSET-6056 09/21/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-11TT1-0004-SM-5S2NT B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -59 BP-45438 RNA isolation_Trizol Manual (Cell Pellet) 11/04/2013 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.991664 622943 0.962377 0.993718 0.824796 19764 1 76 0.00209634 145 0 6.35264e+07 0.0370511 535487 6.39281e+07 4.62427e+06 19776 3.15909e+07 0 0.137581 0.993718 0.819615 6.35264e+07 0.00288721 1.38735e+07 1.39697e+07 1.40218e+07 148 1.3981e+07 1.3376e+07 0.00249096 1.40597e+07 50.1404 0.0083764 0.995771 0 50.2658 GTEX-11TT1-0005-SM-5NQ8Y B1 8.5 Blood Whole Blood 0013756 -59 BP-40138 RNA isolation_PAXgene Blood RNA (Manual) 06/25/2013 LCSET-4906 03/22/2014 TruSeq.v1 RNASEQ 0.990653 569451 0.967113 0.992152 0.824574 19397 1 76 0.00229737 156 0 8.925e+07 0.032371 405239 8.9956e+07 7.43464e+06 19409 4.44583e+07 0 0.142539 0.992152 0.818102 8.925e+07 0.00317109 1.97723e+07 5.31062e+07 1.99779e+07 202 1.99585e+07 1.96321e+07 0.00273357 1.99314e+07 49.966 0.00450486 0.99365 0 50.2586 GTEX-11TT1-0008-SM-5S2P8 B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 134 BP-45530 RNA isolation_Trizol Manual (Cell Pellet) 11/06/2013 LCSET-4988 04/01/2014 TruSeq.v1 RNASEQ 0.992494 412155 0.964803 0.993535 0.868017 18770 1 76 0.00150869 149 0 6.26277e+07 0.0350012 250215 6.30352e+07 3.46202e+06 18777 3.12145e+07 0 0.0967851 0.993535 0.862406 6.26277e+07 0.00217114 1.367e+07 1.67625e+07 1.39479e+07 153 1.38794e+07 1.40869e+07 0.00183957 1.38196e+07 49.8919 0.00396945 0.994577 0 50.5031 GTEX-11TT1-0126-SM-5LUAA 0 B1 2 pieces 9.7 Adrenal Gland Adrenal Gland 0002369 54 481 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.991732 257760 0.978162 0.993599 0.844452 21484 1 76 0.00453413 120 0 6.17437e+07 0.0214285 1.12511e+06 6.21415e+07 5.23865e+06 21497 3.07237e+07 0 0.13371 0.993599 0.839047 6.17437e+07 0.00367373 1.37196e+07 7.71734e+06 1.37747e+07 135 1.37732e+07 1.18449e+07 0.00410474 1.38324e+07 50.1072 0.0181057 0.995466 0 50.1002 GTEX-11TT1-0326-SM-5LUAY 1 B1 2 pieces 7.7 Pancreas Pancreas 0001150 57 478 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.991247 308365 0.969386 0.993358 0.831277 20999 1 76 0.00461112 114 0 5.74283e+07 0.0304285 286664 5.78123e+07 5.00842e+06 21012 2.85597e+07 0 0.138108 0.993358 0.825756 5.74283e+07 0.00400082 1.29795e+07 1.20645e+07 1.3146e+07 115 1.3138e+07 1.44167e+07 0.00430662 1.31168e+07 49.9596 0.00495853 0.995468 0 50.3185 GTEX-11TT1-0426-SM-5EGI9 0 B1 6 pieces, well trimmed 9.1 Esophagus Esophagus - Muscularis 0004648 59 476 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.987525 183429 0.979316 0.991698 0.868023 20347 1 76 0.00225719 134 0 5.98394e+07 0.0203895 701877 6.03404e+07 8.87567e+06 20355 2.97305e+07 0 0.111292 0.991698 0.860817 5.98394e+07 0.00513194 1.29863e+07 5.99826e+06 1.30137e+07 142 1.30216e+07 1.13935e+07 0.00368852 1.32074e+07 50.3541 0.011632 0.99587 0 50.0527 GTEX-11TT1-0526-SM-5P9JO 1 B1 6 pieces, few groups of submucosal glands (marked), detached fragment of adrenal tissue 9.4 Esophagus Esophagus - Mucosa 0006920 60 475 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4916 03/27/2014 TruSeq.v1 RNASEQ 0.991627 199652 0.981743 0.992142 0.868409 21953 1 76 0.00332312 208 0 8.67638e+07 0.0178612 594125 8.7451e+07 2.9029e+06 21965 4.32367e+07 0 0.113334 0.992142 0.861585 8.67638e+07 0.00355497 1.96383e+07 1.24294e+07 1.97449e+07 231 1.96845e+07 1.8928e+07 0.00343898 1.97436e+07 50.075 0.00679381 0.992656 0 50.1353 GTEX-11TT1-0626-SM-5GU4X 0 B1 6 pieces, well trimmed, rare group of submucosal glands (marked) 8.8 Esophagus Esophagus - Gastroesophageal Junction 0004550 61 474 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.990328 303012 0.9776 0.993284 0.857828 20897 1 76 0.00187616 139 0 6.8466e+07 0.0221175 594383 6.89288e+07 4.86126e+06 20905 3.40544e+07 0 0.119772 0.993284 0.852067 6.8466e+07 0.00272376 1.48233e+07 5.97863e+06 1.50335e+07 164 1.49908e+07 1.32221e+07 0.0022987 1.50559e+07 50.1083 0.00862314 0.996241 0 50.352 GTEX-11TT1-0726-SM-5GU5A 1 B1 6 pieces, acute hemorrhagic gastropathy 7.2 Stomach Stomach 0000945 64 471 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.986386 193947 0.980686 0.988773 0.864724 21200 1 76 0.001726 237 0 5.58079e+07 0.0190077 1.13421e+06 5.64416e+07 3.56598e+06 21212 2.77587e+07 0 0.115962 0.988773 0.855016 5.58079e+07 0.00269616 1.28051e+07 4.92106e+07 1.29544e+07 155 1.29691e+07 1.53311e+07 0.00220991 1.29227e+07 49.9104 0.0200953 0.99116 0 50.2898 GTEX-11TT1-0926-SM-5GU5M 1 B1 6 pieces, predominantly well trimmed with few strips of mucosa (marked) 8.7 Colon Colon - Sigmoid 0001159 73 462 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.992014 282614 0.980665 0.994422 0.863865 21284 1 76 0.00183275 142 0 6.383e+07 0.0190714 525744 6.4188e+07 4.44587e+06 21295 3.177e+07 0 0.1168 0.994422 0.859046 6.383e+07 0.00265989 1.40228e+07 5.41527e+06 1.41577e+07 152 1.41223e+07 1.30193e+07 0.00224532 1.42047e+07 50.1455 0.00819069 0.99683 0 50.2393 GTEX-11TT1-1026-SM-5PNW7 1 B1 6 pieces, predominantly mucosa with few strips of muscularis, edema and ischemic change 8.2 Colon Colon - Transverse 0001157 78 457 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.991861 200997 0.97504 0.993451 0.819542 22933 1 76 0.00211706 190 0 7.26161e+07 0.0245178 1.39622e+06 7.30948e+07 6.5326e+06 22956 3.61726e+07 0 0.155498 0.993451 0.814175 7.26161e+07 0.00309285 1.61267e+07 9.06222e+06 1.62323e+07 172 1.62017e+07 1.38302e+07 0.00260417 1.62685e+07 50.1027 0.0191014 0.995041 0 50.1632 GTEX-11TT1-1126-SM-5P9GV 0 B1 2 pieces, focus of solid cell nests 7.1 Thyroid Thyroid 0002046 82 453 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4914 03/27/2014 TruSeq.v1 RNASEQ 0.992535 230914 0.971181 0.992567 0.792816 24328 1 76 0.00295838 275 0 1.05229e+08 0.0285085 593355 1.06017e+08 3.2235e+06 24371 5.24097e+07 0 0.178365 0.992567 0.786923 1.05229e+08 0.00346196 2.31012e+07 1.03302e+07 2.33143e+07 287 2.31727e+07 1.82233e+07 0.00321017 2.32486e+07 50.0818 0.00559679 0.992599 0 50.2296 GTEX-11TT1-1226-SM-5Q5AV 1 B1 6 pieces 7.1 Blood Vessel Artery - Aorta 0001496 86 449 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.992499 228065 0.976175 0.994166 0.85395 21554 1 76 0.00169056 168 0 7.46644e+07 0.0234716 260946 7.51025e+07 5.43228e+06 21566 3.71728e+07 0 0.122225 0.994166 0.848968 7.46644e+07 0.00274868 1.63524e+07 7.17866e+06 1.64637e+07 186 1.64058e+07 1.49144e+07 0.00221873 1.65337e+07 50.1941 0.00347453 0.995834 0 50.1697 GTEX-11TT1-1326-SM-5PNYM 0 B1 2 pieces 8 Heart Heart - Left Ventricle 0006566 88 447 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.993293 214834 0.986616 0.994168 0.880987 19951 1 76 0.00320774 268 0 9.68912e+07 0.0131332 4.39931e+06 9.74595e+07 2.61771e+06 19956 4.82852e+07 0 0.105628 0.994168 0.87585 9.68912e+07 0.0035862 2.13852e+07 1.70909e+07 2.1791e+07 292 2.15047e+07 1.60953e+07 0.0033968 2.17491e+07 50.2824 0.0451398 0.995044 0 50.4699 GTEX-11TT1-1426-SM-5EGIA 0 B1 2 pieces, one piece is 40% fat 9 Heart Heart - Atrial Appendage 0006631 89 446 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.985444 178020 0.982537 0.990788 0.865531 20420 1 76 0.00247236 124 0 6.04895e+07 0.0171703 1.27917e+06 6.10519e+07 9.18457e+06 20427 3.00203e+07 0 0.117006 0.990788 0.857558 6.04895e+07 0.00575405 1.31838e+07 9.15616e+06 1.31273e+07 144 1.31064e+07 1.07777e+07 0.00410435 1.34930e+07 50.7268 0.0209521 0.996131 0 49.8926 GTEX-11TT1-1526-SM-5EQKU 1 B1 2 pieces, one piece is 50% fat 8.2 Blood Vessel Artery - Coronary 0001621 93 442 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.992576 245970 0.979711 0.994134 0.865693 20543 1 76 0.00193634 206 0 7.85849e+07 0.0199443 270889 7.90486e+07 9.01807e+06 20552 3.915e+07 0 0.114018 0.994134 0.860615 7.85849e+07 0.0027684 1.72088e+07 6.1676e+06 1.73218e+07 206 1.72647e+07 1.67446e+07 0.00235171 1.73844e+07 50.1728 0.00342687 0.995692 0 50.1636 GTEX-11TT1-1626-SM-5EQL7 1 B1 2 pieces, congestion, numerous hemosiderin-laden macrophages, atelectasis 8.9 Lung Lung 0008952 96 439 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.991852 246391 0.978826 0.993533 0.825397 23073 1 76 0.00218898 206 0 7.93338e+07 0.0207876 451398 7.98501e+07 1.02441e+07 23095 3.9517e+07 0 0.153429 0.993533 0.82006 7.93338e+07 0.0029835 1.77501e+07 7.45274e+06 1.78075e+07 206 1.78129e+07 1.58373e+07 0.00258557 1.78745e+07 50.0863 0.00565306 0.995214 0 50.0808 GTEX-11TT1-1726-SM-5EQLJ 1 B1 2 pieces 9.1 Liver Liver 0001114 98 437 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.992038 200661 0.983592 0.994016 0.869485 19941 1 76 0.00195249 133 0 6.24221e+07 0.0161044 777996 6.27979e+07 8.48243e+06 19948 3.10934e+07 0 0.114107 0.994016 0.864282 6.24221e+07 0.00284953 1.40528e+07 7.75618e+06 1.40383e+07 142 1.40654e+07 1.41993e+07 0.00240012 1.41441e+07 50.1396 0.0123889 0.995993 0 49.9741 GTEX-11TT1-1826-SM-5EQLV 0 B1 6 pieces, several include attached and internal fat up to 20%, numerous hair follicles, sweat and sebaceous glands 6.4 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 100 435 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.989138 277049 0.969947 0.991537 0.79894 23798 1 76 0.0024201 156 0 6.91937e+07 0.0298847 1.45466e+06 6.97843e+07 9.70513e+06 23821 3.44353e+07 0 0.171007 0.991537 0.792178 6.91937e+07 0.00359167 1.53132e+07 8.86556e+06 1.54587e+07 171 1.53655e+07 9.49832e+06 0.00300447 1.55654e+07 50.3231 0.0208451 0.993935 0 50.2364 GTEX-11TT1-1926-SM-5PNYN 0 B1 2 pieces, few larger vessels and incidental lymph node 7.7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 101 434 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.99318 197177 0.983532 0.993763 0.867051 22069 1 76 0.00309417 275 0 1.08253e+08 0.0162539 1.05146e+06 1.08932e+08 3.00128e+06 22082 5.39643e+07 0 0.116481 0.993763 0.861643 1.08253e+08 0.0034338 2.42263e+07 1.24373e+07 2.44466e+07 318 2.42866e+07 1.96708e+07 0.00326388 2.44443e+07 50.1618 0.00965246 0.994346 0 50.2263 GTEX-11TT1-2026-SM-5EQM8 1 B1 2 pieces, epithelium focally sloughing 8.2 Prostate Prostate 0002367 107 428 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.990586 286420 0.968851 0.992921 0.766153 24699 1 76 0.00216922 162 0 7.67062e+07 0.0308714 428185 7.7253e+07 1.03173e+07 24734 3.81817e+07 0 0.202698 0.992921 0.760729 7.67062e+07 0.00307386 1.69061e+07 7.51378e+06 1.69824e+07 176 1.69948e+07 1.22745e+07 0.00262048 1.70668e+07 50.1058 0.00554263 0.995256 0 50.1125 GTEX-11TT1-2126-SM-5GU5Y 0 B1 3 pieces, gynecomastoid change and focal apocrine metaplasia 7.5 Breast Breast - Mammary Tissue 0008367 112 423 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.988097 238489 0.979508 0.991607 0.871656 22141 1 76 0.0018641 147 0 6.24796e+07 0.0201896 294234 6.30084e+07 4.51809e+06 22151 3.10304e+07 0 0.107852 0.991607 0.86434 6.24796e+07 0.00291975 1.37497e+07 6.88567e+06 1.39251e+07 149 1.38872e+07 1.48522e+07 0.00239006 1.40079e+07 50.2165 0.00466976 0.995117 0 50.3169 GTEX-11TT1-2226-SM-5GU6B 1 B1 3 pieces, active spermatogenesis 7.8 Testis Testis 0000473 114 421 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.989539 450984 0.941745 0.992142 0.745734 30723 1 76 0.00199808 125 0 6.12757e+07 0.0579356 665218 6.1761e+07 4.01942e+06 30764 3.04775e+07 0 0.196011 0.992142 0.739874 6.12757e+07 0.00274205 1.28967e+07 8.16389e+06 1.30211e+07 127 1.30627e+07 1.0695e+07 0.00236909 1.30028e+07 49.8851 0.0107708 0.994745 0 50.24 GTEX-11TT1-2326-SM-5GU6N 0 B1 2 pieces, skeletal muscle with attached portion of tendon 8.7 Muscle Muscle - Skeletal 0011907 132 403 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.992405 253051 0.98624 0.994448 0.893861 17463 1 76 0.00187391 139 0 5.4143e+07 0.0135182 688426 5.44453e+07 3.42138e+06 17465 2.69571e+07 0 0.0923787 0.994448 0.888899 5.4143e+07 0.00274054 1.18377e+07 6.89096e+06 1.191e+07 139 1.18709e+07 1.13203e+07 0.00230634 1.19794e+07 50.2274 0.0126444 0.99649 0 50.1523 GTEX-11TT1-2426-SM-5EQMK 0 B1 2 pieces, small component of fibrous tissue/vessels 8.3 Adipose Tissue Adipose - Subcutaneous 0002190 133 402 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.990657 190949 0.982718 0.992927 0.833321 20289 1 76 0.00218532 140 0 6.05673e+07 0.0170326 597529 6.09988e+07 8.11262e+06 20301 3.01505e+07 0 0.149397 0.992927 0.827427 6.05673e+07 0.00321874 1.36443e+07 6.05385e+06 1.36607e+07 145 1.36531e+07 1.12771e+07 0.00270084 1.3784e+07 50.2385 0.00979575 0.995196 0 50.03 GTEX-11TT1-2526-SM-5EGIB 0 B1 6 pieces, attached and internal adipose tissue up to ~20%, squamous epithelium measured 45 to 54 microns 7.7 Skin Skin - Sun Exposed (Lower leg) 0004264 135 400 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.983896 212846 0.974765 0.989006 0.774532 23405 1 76 0.00258897 156 0 6.8914e+07 0.0249945 810275 6.968e+07 1.0628e+07 23427 3.41934e+07 0 0.200233 0.989006 0.766017 6.8914e+07 0.0056341 1.53072e+07 8.90264e+06 1.53803e+07 149 1.54648e+07 1.15622e+07 0.00410367 1.55596e+07 50.1528 0.0116285 0.994117 0 50.1191 GTEX-11TT1-2626-SM-5EGL2 0 B1 3 pieces, two include peripheral rim of adipose tissue (10-20%) 7.5 Nerve Nerve - Tibial 0001323 138 397 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.988623 241589 0.975705 0.992011 0.803868 23110 1 76 0.00190339 213 0 8.26679e+07 0.0240336 459273 8.33336e+07 7.39402e+06 23138 4.10925e+07 0 0.171838 0.992011 0.797446 8.26679e+07 0.00295284 1.81994e+07 7.59142e+06 1.83794e+07 214 1.83817e+07 1.46946e+07 0.00242632 1.84627e+07 50.11 0.00551126 0.9954 0 50.246 GTEX-11TT1-2726-SM-5LU8L 1 B1 2 pieces 8.8 Blood Vessel Artery - Tibial 0007610 139 396 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.99255 224244 0.980925 0.994358 0.887833 19975 1 76 0.00426404 143 0 7.43613e+07 0.0186716 359552 7.47832e+07 6.1381e+06 19981 3.69925e+07 0 0.0930918 0.994358 0.882824 7.43613e+07 0.00351082 1.61529e+07 5.6456e+06 1.62607e+07 163 1.62355e+07 1.71195e+07 0.00388812 1.63133e+07 50.1196 0.00480792 0.996165 0 50.1662 GTEX-11TTK-0002-SM-58Q8B C1 Blood Whole Blood 0013756 715 BP-40136 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/25/2013 LCSET-4574 01/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-11TTK-0002-SM-5DWT4 C1 Blood Whole Blood 0013756 715 BP-40136 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/25/2013 GTEx_OM25_Dec_01 01/29/2014 Illumina OMNI SNP Array OMNI GTEX-11TTK-0002-SM-6WBTX C1 Blood Whole Blood 0013756 715 BP-40136 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/25/2013 LCSET-6056 09/21/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-11TTK-0005-SM-5O9BX C1 6.9 Blood Whole Blood 0013756 715 BP-40138 RNA isolation_PAXgene Blood RNA (Manual) 06/25/2013 LCSET-4910 04/01/2014 TruSeq.v1 RNASEQ 0.942579 561418 0.982147 0.945197 0.806499 17030 1 76 0.00357688 143 0 1.33308e+08 0.0162683 220407 1.41037e+08 6.15276e+06 17031 6.62148e+07 0 0.175648 0.945197 0.762301 1.33308e+08 0.00503947 3.15412e+07 2.60345e+08 3.24061e+07 187 3.24228e+07 3.91298e+07 0.00430615 3.1905e+07 49.5975 0.00156276 0.947815 0 50.6763 GTEX-11TTK-0008-SM-5S2RU C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 1123 BP-45530 RNA isolation_Trizol Manual (Cell Pellet) 11/06/2013 LCSET-4988 04/01/2014 TruSeq.v1 RNASEQ 0.994155 378807 0.973545 0.994915 0.872804 19407 1 76 0.00139841 149 0 6.65777e+07 0.0261909 351700 6.6918e+07 3.49e+06 19417 3.31743e+07 0 0.100741 0.994915 0.868366 6.65777e+07 0.00208719 1.47475e+07 1.26223e+07 1.48596e+07 158 1.47721e+07 1.5709e+07 0.00174254 1.48996e+07 50.2148 0.00525569 0.995675 0 50.1894 GTEX-11TTK-0011-R10b-SM-DO925 C1, A1 7.1 Brain Brain - Frontal Cortex (BA9) 0009834 720 BP-43067 RNA isolation_PAXgene Tissue miRNA 09/04/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.994639 590960 0.964428 0.995516 0.844257 23051 1 76 0.00180028 283 0 8.3521e+07 0.0352125 5.15848e+06 8.38972e+07 4.95792e+06 23071 4.16161e+07 0 0.120172 0.995516 0.840471 8.3521e+07 0.00228671 1.83875e+07 1.24633e+07 1.87751e+07 319 1.8582e+07 1.09859e+07 0.00204328 1.86478e+07 50.0883 0.0614857 0.996392 0 50.5215 GTEX-11TTK-0011-R11b-SM-DO112 C1, A1 9 Brain Brain - Cerebellar Hemisphere 0002037 720 BP-43067 RNA isolation_PAXgene Tissue miRNA 09/04/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.986348 781907 0.944913 0.990275 0.732654 24746 1 76 0.00264996 272 0 1.09869e+08 0.0545999 2.02301e+06 1.10948e+08 1.17402e+07 24783 5.45341e+07 0 0.212259 0.990275 0.725529 1.09869e+08 0.00444526 2.36367e+07 1.8974e+07 2.38057e+07 284 2.39795e+07 1.38667e+07 0.00354405 2.38494e+07 49.864 0.0182339 0.994202 0 50.1782 GTEX-11TTK-0011-R4a-SM-DNZZU C1, A1 6.9 Brain Brain - Amygdala 0001876 720 BP-43065 RNA isolation_PAXgene Tissue miRNA 09/04/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.988432 521593 0.967585 0.992451 0.864146 23012 1 76 0.00208459 269 0 8.34296e+07 0.032131 7.64459e+06 8.40642e+07 8.78650e+06 23033 4.14573e+07 0 0.103439 0.992451 0.857623 8.34296e+07 0.00408478 1.82901e+07 1.95361e+07 1.88323e+07 312 1.878e+07 9.38088e+06 0.00308063 1.86286e+07 49.7978 0.0909375 0.996471 0 50.7302 GTEX-11TTK-0011-R5a-SM-DNZZV C1, A1 6.3 Brain Brain - Caudate (basal ganglia) 0001873 720 BP-43065 RNA isolation_PAXgene Tissue miRNA 09/04/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.987692 831820 0.963154 0.991873 0.851228 23869 1 76 0.00209961 371 0 1.0497e+08 0.036588 8.73084e+06 1.0583e+08 1.05496e+07 23888 5.21396e+07 0 0.111925 0.991873 0.84431 1.0497e+08 0.00433024 2.28981e+07 2.80426e+07 2.35043e+07 340 2.35538e+07 1.11038e+07 0.00321022 2.32305e+07 49.6544 0.0824985 0.996053 0 50.6531 GTEX-11TTK-0011-R6b-SM-DNZZW C1, A1 6.1 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 720 BP-43065 RNA isolation_PAXgene Tissue miRNA 09/04/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.987246 745316 0.963153 0.991611 0.851391 23334 1 76 0.00209637 272 0 9.47266e+07 0.0365746 7.95716e+06 9.55279e+07 9.97092e+06 23348 4.70427e+07 0 0.111761 0.991611 0.844249 9.47266e+07 0.00422817 2.05755e+07 2.67959e+07 2.1257e+07 327 2.12061e+07 1.03828e+07 0.00315758 2.09769e+07 49.7283 0.0832967 0.995976 0 50.8146 GTEX-11TTK-0011-R7b-SM-DNZZZ C1, A1 9.3 Brain Brain - Putamen (basal ganglia) 0001874 720 BP-43067 RNA isolation_PAXgene Tissue miRNA 09/04/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.987444 809520 0.959398 0.991667 0.836539 24712 1 76 0.00205923 270 0 1.0666e+08 0.0402887 6.75492e+06 1.07556e+08 9.92117e+06 24739 5.29747e+07 0 0.12286 0.991667 0.829567 1.0666e+08 0.00453504 2.32764e+07 2.32412e+07 2.35346e+07 327 2.35809e+07 1.22172e+07 0.00329186 2.36267e+07 50.0485 0.0628036 0.995889 0 50.2758 GTEX-11TTK-0011-R8b-SM-DO111 C1, A1 7.8 Brain Brain - Hypothalamus 0001898 720 BP-43067 RNA isolation_PAXgene Tissue miRNA 09/04/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.987537 647708 0.966376 0.991737 0.847183 23216 1 76 0.00216414 275 0 9.06861e+07 0.033363 5.88987e+06 9.14417e+07 9.75011e+06 23241 4.5041e+07 0 0.119192 0.991737 0.840183 9.06861e+07 0.00427198 1.99699e+07 1.70199e+07 2.04507e+07 330 2.05207e+07 1.0624e+07 0.0032136 2.02373e+07 49.6523 0.0644113 0.995937 0 50.5948 GTEX-11TTK-0126-SM-5987B 1 C1 6 pieces; sweat glands moderately autolyzed 6.8 Skin Skin - Sun Exposed (Lower leg) 0004264 1122 784 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.984731 221008 0.9757 0.988892 0.7678 23705 1 76 0.00269046 148 0 6.96098e+07 0.0240403 443551 7.03917e+07 1.45449e+07 23736 3.45799e+07 0 0.207899 0.988892 0.759272 6.96098e+07 0.00613741 1.54494e+07 8.17759e+06 1.54752e+07 150 1.5555e+07 1.1216e+07 0.00440668 1.56439e+07 50.1426 0.00630119 0.993054 0 50.0418 GTEX-11TTK-0226-SM-5N9EC 1 C1 2 pieces 5.7 Adipose Tissue Adipose - Subcutaneous 0002190 1125 781 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.986479 409763 0.975791 0.987926 0.773663 23947 1 76 0.00409668 281 0 1.04707e+08 0.0238834 530829 1.05986e+08 5.3289e+06 23990 5.19698e+07 0 0.202128 0.987926 0.764321 1.04707e+08 0.00428268 2.31803e+07 1.09149e+07 2.32793e+07 267 2.32323e+07 1.71885e+07 0.00418954 2.33783e+07 50.1566 0.00500846 0.989373 0 50.1065 GTEX-11TTK-0326-SM-5BC5N 1 C1 2 pieces; 1 with 25% fibroadipose tissue; 1 with 10% fat; scattered atrophic fibers 7.1 Muscle Muscle - Skeletal 0011907 1126 781 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.985486 338751 0.973713 0.991001 0.817706 20815 1 76 0.00242538 126 0 6.18143e+07 0.0260406 567856 6.23757e+07 1.63209e+07 20828 3.06632e+07 0 0.156008 0.991001 0.810347 6.18143e+07 0.00528482 1.32696e+07 6.65665e+06 1.33339e+07 141 1.34245e+07 1.17202e+07 0.00384714 1.3495e+07 50.131 0.0091038 0.996516 0 50.1209 GTEX-11TTK-0426-SM-5EQLT 1 C1 2 pieces; 40 & 20% internal fat 6.9 Nerve Nerve - Tibial 0001323 1128 779 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.989599 281774 0.966644 0.991654 0.714689 23580 1 76 0.00225336 164 0 7.06783e+07 0.0330733 253212 7.12731e+07 8.45335e+06 23614 3.51531e+07 0 0.251955 0.991654 0.708725 7.06783e+07 0.00343286 1.55576e+07 6.71312e+06 1.56464e+07 155 1.563e+07 1.02758e+07 0.00284189 1.5716e+07 50.1372 0.0035527 0.993709 0 50.1424 GTEX-11TTK-0826-SM-5N9EG 2 C1 2 pieces 5.7 Thyroid Thyroid 0002046 1133 776 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.984881 375886 0.969819 0.986374 0.809101 24978 1 76 0.00400407 377 0 1.13296e+08 0.0298654 799921 1.14861e+08 6.41961e+06 25010 5.62369e+07 0 0.160718 0.986374 0.798076 1.13296e+08 0.00417686 2.49537e+07 1.2855e+07 2.50851e+07 337 2.50333e+07 2.01544e+07 0.00409034 2.51805e+07 50.1466 0.00696424 0.987866 0 50.1313 GTEX-11TTK-1926-SM-5PNW8 2 C1 2 pieces; extensive vascular, parenchymal and glomerular sclerosis [c/w renal failure] 6.2 Kidney Kidney - Cortex 0001225 1154 763 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.988929 178809 0.976182 0.991052 0.802731 23654 1 76 0.00205925 164 0 7.94909e+07 0.0234537 1.40937e+06 8.02086e+07 7.94089e+06 23678 3.95197e+07 0 0.173451 0.991052 0.795549 7.94909e+07 0.00316526 1.74905e+07 8.98381e+06 1.76881e+07 182 1.76278e+07 1.51168e+07 0.00261107 1.77277e+07 50.1413 0.0175713 0.993176 0 50.2809 GTEX-11TTK-2426-SM-5PNYO 3 C1 6 pieces; mucosa too autolyzed for GTEx, but muscularis is acceptable 5.8 Colon Colon - Transverse 0001157 1163 757 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.988902 254686 0.973589 0.989575 0.832401 23705 1 76 0.00311315 215 0 9.51765e+07 0.0260996 906290 9.61792e+07 2.95958e+06 23730 4.73336e+07 0 0.141188 0.989575 0.823723 9.51765e+07 0.00371775 2.06326e+07 8.56721e+06 2.07753e+07 240 2.06422e+07 1.74886e+07 0.00341524 2.08387e+07 50.2369 0.00942293 0.990248 0 50.1723 GTEX-11TTK-2726-SM-5GU58 1 C1 6 pieces 5.9 Vagina Vagina 0000996 1170 767 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.987657 235682 0.965655 0.990216 0.693495 23125 1 76 0.00219418 126 0 5.91477e+07 0.0341666 494057 5.97321e+07 3.80786e+06 23152 2.93843e+07 0 0.27216 0.990216 0.68671 5.91477e+07 0.00318883 1.30856e+07 7.18248e+06 1.32068e+07 132 1.31744e+07 8.05089e+06 0.00269022 1.32667e+07 50.1745 0.00827122 0.992775 0 50.2305 GTEX-11TTK-2826-SM-5GU5K 1 C1 4 pieces 6.2 Brain Brain - Cerebellum 0002037 1186 751 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.988685 617528 0.934308 0.991724 0.719294 23667 1 76 0.00208712 154 0 7.27655e+07 0.0653537 1.56516e+06 7.33727e+07 5.12934e+06 23692 3.6163e+07 0 0.215014 0.991724 0.713341 7.27655e+07 0.00301883 1.54908e+07 2.51907e+07 1.57248e+07 180 1.57272e+07 7.93377e+06 0.00255155 1.56992e+07 49.9555 0.0213316 0.994764 0 50.3749 GTEX-11TTK-2926-SM-5PNYP 1 C1 4 pieces 6.1 Brain Brain - Cortex 0001870 1189 749 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.983842 747022 0.959169 0.984986 0.840014 23178 1 76 0.00312585 369 0 9.61341e+07 0.0405553 7.86756e+06 9.75994e+07 3.19938e+06 23191 4.77898e+07 0 0.119155 0.984986 0.827402 9.61341e+07 0.00365518 2.09303e+07 3.26674e+07 2.15011e+07 359 2.11854e+07 9.25524e+06 0.00339021 2.13369e+07 50.1781 0.0806107 0.98613 0 50.6727 GTEX-11TUW-0004-SM-58Q8F B1 Blood Whole Blood 0013756 650 BP-40136 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/25/2013 LCSET-4574 01/20/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-11TUW-0004-SM-5DWT8 B1 Blood Whole Blood 0013756 650 BP-40136 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/25/2013 GTEx_OM25_Dec_01 01/28/2014 Illumina OMNI SNP Array OMNI GTEX-11TUW-0004-SM-6WBU1 B1 Blood Whole Blood 0013756 650 BP-40136 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/25/2013 LCSET-6056 09/22/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) EXCLUDE GTEX-11TUW-0004-SM-7FG6E B1 Blood Whole Blood 0013756 650 BP-40136 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/25/2013 LCSET-6831,LCSET-6976 03/19/2015 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-11TUW-0006-SM-5LZW2 B1 9.2 Blood Whole Blood 0013756 650 BP-40138 RNA isolation_PAXgene Blood RNA (Manual) 06/25/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.9904 630207 0.965767 0.992045 0.755603 19881 1 76 0.0030265 124 0 7.11426e+07 0.0337402 165935 7.17131e+07 3.52669e+06 19900 3.53857e+07 0 0.210164 0.992045 0.749592 7.11426e+07 0.00386138 1.57086e+07 2.5847e+07 1.58534e+07 140 1.59017e+07 1.31701e+07 0.00344325 1.57836e+07 49.8137 0.00231387 0.99369 0 50.2294 GTEX-11TUW-0008-SM-5SI6S B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 824 BP-45532 RNA isolation_Trizol Manual (Cell Pellet) 11/06/2013 LCSET-4995 04/05/2014 TruSeq.v1 RNASEQ 0.989703 433544 0.97342 0.993249 0.857292 21669 1 76 0.00169604 281 0 9.47677e+07 0.0262926 510466 9.54118e+07 9.73851e+06 21689 4.71266e+07 0 0.116128 0.993249 0.851504 9.47677e+07 0.00294047 2.09552e+07 1.48546e+07 2.11317e+07 263 2.1198e+07 2.25747e+07 0.00231604 2.12212e+07 50.0274 0.00535014 0.996795 0 50.2097 GTEX-11TUW-0011-R10a-SM-DO924 B1, A1 5.6 Brain Brain - Frontal Cortex (BA9) 0009834 655 BP-43065 RNA isolation_PAXgene Tissue miRNA 09/04/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.99515 347576 0.970704 0.995916 0.84582 23303 1 76 0.00185785 270 0 8.21405e+07 0.0290507 1.01643e+07 8.24773e+07 4.96517e+06 23329 4.09531e+07 0 0.124884 0.995916 0.842366 8.21405e+07 0.00224862 1.81949e+07 1.19621e+07 1.85839e+07 321 1.8426e+07 9.21703e+06 0.00205308 1.84048e+07 49.9712 0.123238 0.996682 0 50.5288 GTEX-11TUW-0011-R11b-SM-DNZZX B1, A1 5.7 Brain Brain - Cerebellar Hemisphere 0002037 655 BP-43065 RNA isolation_PAXgene Tissue miRNA 09/04/2013 LCSET-10340 02/12/2017 TruSeq.v1 EXCLUDE 0.986133 650924 0.948484 0.990521 0.799005 26106 1 76 0.00240712 373 0 1.11123e+08 0.0513333 9.65562e+06 1.12186e+08 1.12555e+07 26138 5.5179e+07 0 0.149479 0.990521 0.791432 1.11123e+08 0.00463227 2.37827e+07 2.91446e+07 2.44928e+07 334 2.45052e+07 8.88489e+06 0.00351477 2.41706e+07 49.6562 0.0860676 0.994909 0 50.7354 GTEX-11TUW-0011-R1a-SM-DO92S B1, A1 5.8 Brain Brain - Hippocampus 0001954 655 BP-43067 RNA isolation_PAXgene Tissue miRNA 09/04/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.99343 628940 0.97152 0.994578 0.837961 22823 1 76 0.00188814 371 0 8.978e+07 0.0282911 1.18287e+07 9.02695e+07 5.58887e+06 22843 4.47139e+07 0 0.133559 0.994578 0.833417 8.978e+07 0.00233071 1.95954e+07 2.06471e+07 2.03404e+07 379 2.0053e+07 7.92556e+06 0.00210917 1.99664e+07 49.8918 0.131038 0.995726 0 50.9328 GTEX-11TUW-0011-R2b-SM-DO92T B1, A1 6.4 Brain Brain - Substantia nigra 0002038 655 BP-43067 RNA isolation_PAXgene Tissue miRNA 09/04/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.995376 333833 0.970971 0.996071 0.863555 22718 1 76 0.00179148 274 0 7.45016e+07 0.0287793 1.00215e+07 7.47955e+07 4.54177e+06 22730 3.71478e+07 0 0.107417 0.996071 0.860162 7.45016e+07 0.0022891 1.65449e+07 1.14777e+07 1.689e+07 291 1.67418e+07 8.77512e+06 0.00204012 1.67408e+07 49.9985 0.133986 0.996766 0 50.516 GTEX-11TUW-0011-R3a-SM-DO92U B1, A1 5.6 Brain Brain - Anterior cingulate cortex (BA24) 0009835 655 BP-43067 RNA isolation_PAXgene Tissue miRNA 09/04/2013 LCSET-10341 02/22/2017 TruSeq.v1 EXCLUDE 0.995781 221493 0.975464 0.996515 0.882489 21171 1 76 0.00170449 193 0 6.34428e+07 0.0243101 1.02513e+07 6.36647e+07 3.57312e+06 21180 3.16455e+07 0 0.0929749 0.996515 0.879413 6.34428e+07 0.00213229 1.41577e+07 1.00486e+07 1.4518e+07 254 1.43409e+07 5.56442e+06 0.00191823 1.43674e+07 50.0461 0.161021 0.997248 0 50.6283 GTEX-11TUW-0011-R5b-SM-5BC6Q B1, A1 6.2 Brain Brain - Caudate (basal ganglia) 0001873 655 BP-43229 RNA isolation_PAXgene Tissue miRNA 09/06/2013 LCSET-4455 01/18/2014 TruSeq.v1 EXCLUDE 0.986364 398121 0.974185 0.991152 0.852898 21386 1 76 0.00262316 368 0 7.64058e+07 0.0256616 9.40269e+06 7.70879e+07 1.96115e+07 21395 3.79332e+07 0 0.121287 0.991152 0.845351 7.64058e+07 0.00522052 1.68723e+07 3.28581e+07 1.659e+07 331 1.64333e+07 5.21863e+06 0.00391557 1.73105e+07 51.2998 0.121974 0.99594 0 49.5781 GTEX-11TUW-0226-SM-5LU8X 1 B1 2 pieces, some nodularity/fibrosis, single collection of lymphocytes 6.5 Thyroid Thyroid 0002046 722 973 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.989758 346673 0.964636 0.991837 0.712269 23407 1 76 0.00457759 124 0 6.66103e+07 0.0351282 204942 6.71585e+07 5.44870e+06 23436 3.30994e+07 0 0.252367 0.991837 0.706455 6.66103e+07 0.00393954 1.45531e+07 6.79378e+06 1.46006e+07 138 1.46173e+07 9.14643e+06 0.00425923 1.46714e+07 50.0924 0.00305162 0.993917 0 50.0816 GTEX-11TUW-0526-SM-5LU9A 1 B1 2 pieces, intrapulmonary lymph node, includes several large vessels and focus of cartilage, some hemosiderin-laden macrophages 7.7 Lung Lung 0008952 727 968 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.990118 298222 0.971571 0.992129 0.733247 23412 1 76 0.00483399 124 0 6.48262e+07 0.0278798 203066 6.53405e+07 5.49964e+06 23445 3.22078e+07 0 0.238324 0.992129 0.727475 6.48262e+07 0.00420826 1.42992e+07 6.04738e+06 1.43767e+07 131 1.43871e+07 9.97481e+06 0.00452176 1.44149e+07 50.0483 0.00310781 0.994139 0 50.135 GTEX-11TUW-0626-SM-5LU9M 1 B1 6 pieces, 2 with ~20% attached fat 7.3 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 729 966 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.989057 412570 0.965227 0.991171 0.743486 22518 1 76 0.00461523 136 0 5.90601e+07 0.0345692 283753 5.95861e+07 4.9718e+06 22540 2.93475e+07 0 0.221741 0.991171 0.736922 5.90601e+07 0.00397324 1.2967e+07 9.75363e+06 1.30173e+07 131 1.3021e+07 8.75027e+06 0.00429492 1.30907e+07 50.1335 0.00476206 0.993286 0 50.0969 GTEX-11TUW-0926-SM-5EQMW 1 B1 6 pieces 6.7 Blood Vessel Artery - Aorta 0001496 737 958 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.989917 228559 0.970713 0.992033 0.767145 21793 1 76 0.00221454 131 0 6.79044e+07 0.028902 123910 6.84498e+07 9.12563e+06 21824 3.37708e+07 0 0.203568 0.992033 0.761033 6.79044e+07 0.00319578 1.48207e+07 6.52665e+06 1.48776e+07 145 1.4887e+07 1.20731e+07 0.00270411 1.49509e+07 50.1071 0.00181023 0.994149 0 50.0959 GTEX-11TUW-1026-SM-5GU7D 1 B1 2 pieces, interstitial and patchy fibrosis 6.4 Heart Heart - Left Ventricle 0006566 739 956 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4803,LCSET-5132 03/08/2014 TruSeq.v1 RNASEQ 0.989358 399017 0.980206 0.992821 0.839988 22031 1 76 0.00204837 266 0 8.32847e+07 0.0196426 3.65801e+06 8.38869e+07 5.25336e+06 22048 4.13832e+07 0 0.140218 0.992821 0.833958 8.32847e+07 0.00317473 1.85688e+07 1.19213e+07 1.84788e+07 275 1.84386e+07 1.065e+07 0.00260958 1.88743e+07 50.5838 0.0436064 0.996285 0 49.8785 GTEX-11TUW-1126-SM-5EQKJ 1 B1 2 pieces, both ~40% fat, myocyte hypertrophy 6.8 Heart Heart - Atrial Appendage 0006631 742 953 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.991409 208641 0.979134 0.993668 0.818426 21775 1 76 0.00194542 267 0 7.54158e+07 0.0207127 2.38862e+06 7.58963e+07 9.96544e+06 21794 3.75502e+07 0 0.160709 0.993668 0.813243 7.54158e+07 0.00300938 1.66661e+07 1.54962e+07 1.64228e+07 256 1.63989e+07 9.25812e+06 0.00247619 1.68471e+07 50.6741 0.0314721 0.995926 0 49.6323 GTEX-11TUW-1226-SM-5GU7C 1 B1 6 pieces, well trimmed 6.2 Esophagus Esophagus - Muscularis 0004648 744 951 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.989808 195292 0.967738 0.99231 0.780224 22099 1 76 0.00201512 130 0 6.08042e+07 0.0320796 806577 6.12754e+07 4.03215e+06 22122 3.02244e+07 0 0.187514 0.99231 0.774223 6.08042e+07 0.0029113 1.31972e+07 6.07172e+06 1.32668e+07 162 1.32117e+07 6.89033e+06 0.00246208 1.33961e+07 50.3466 0.0131631 0.994811 0 50.1316 GTEX-11TUW-1326-SM-5EQKV 1 B1 6 pieces, few clusters of submucosal glands 7.3 Esophagus Esophagus - Mucosa 0006920 745 950 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.990495 274255 0.972407 0.992865 0.793536 22827 1 76 0.00212791 160 0 7.29777e+07 0.0273744 455159 7.35021e+07 9.95197e+06 22849 3.63208e+07 0 0.178871 0.992865 0.787875 7.29777e+07 0.00315231 1.62533e+07 8.92748e+06 1.63318e+07 179 1.63343e+07 1.15966e+07 0.00263889 1.64168e+07 50.1259 0.00619246 0.995236 0 50.1206 GTEX-11TUW-1726-SM-5BC5C 2 B1 2 pieces, severe micro and macrovesicular steatosis 6.1 Liver Liver 0001114 755 940 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.988223 311909 0.982101 0.99177 0.838421 19682 1 76 0.00257376 155 0 6.93334e+07 0.01773 564970 6.99087e+07 1.68031e+07 19697 3.44554e+07 0 0.143679 0.99177 0.831521 6.93334e+07 0.00485555 1.54665e+07 1.10316e+07 1.54648e+07 182 1.55194e+07 1.04795e+07 0.00371058 1.56366e+07 50.188 0.00808154 0.995316 0 49.9972 GTEX-11TUW-1826-SM-5BC5D 1 B1 2 pieces, predominantly fat, ~5-10% fibrous, no ductal/lobular elements noted 7.6 Breast Breast - Mammary Tissue 0008367 764 931 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.986055 292143 0.973722 0.990856 0.809961 21984 1 76 0.00265264 142 0 6.76071e+07 0.0260078 373120 6.8231e+07 1.88996e+07 21997 3.35613e+07 0 0.163762 0.990856 0.802554 6.76071e+07 0.00493807 1.48228e+07 7.62319e+06 1.49077e+07 157 1.50008e+07 1.13364e+07 0.00378982 1.50343e+07 50.0558 0.00546848 0.995656 0 50.1427 GTEX-11TUW-1926-SM-5BC58 3 B1 7 pieces, severely autolyzed mucosa with good lymphoid component, includes some muscularis (not target) 6 Small Intestine Small Intestine - Terminal Ileum 0001211 770 925 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.984973 265372 0.955625 0.989094 0.660028 23981 1 76 0.00305493 119 0 6.07206e+07 0.0439969 150261 6.13902e+07 1.48911e+07 24023 3.0118e+07 0 0.295597 0.989094 0.65283 6.07206e+07 0.00546409 1.30774e+07 7.86516e+06 1.32474e+07 123 1.33023e+07 8.10202e+06 0.00425449 1.32641e+07 49.9282 0.00244764 0.993215 0 50.3229 GTEX-11TUW-2026-SM-5EQL8 3 B1 8 pieces, muscularis and severely autolyzed mucosa 6.7 Colon Colon - Transverse 0001157 778 917 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.988999 295079 0.967186 0.991782 0.752819 22706 1 76 0.00214564 134 0 7.11294e+07 0.0326178 448329 7.17188e+07 8.43408e+06 22737 3.53672e+07 0 0.214367 0.991782 0.746632 7.11294e+07 0.00337231 1.54192e+07 6.66044e+06 1.54732e+07 164 1.5465e+07 9.99731e+06 0.00275725 1.56171e+07 50.2446 0.0062512 0.994563 0 50.0875 GTEX-11TUW-2126-SM-5GU7B 2 B1 2 pieces, epithelium sloughing 5.8 Prostate Prostate 0002367 781 914 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.989669 246011 0.965148 0.992248 0.752237 23338 1 76 0.00207211 126 0 5.67137e+07 0.0345552 292804 5.71567e+07 3.91409e+06 23361 2.81894e+07 0 0.212911 0.992248 0.746406 5.67137e+07 0.00305887 1.24794e+07 6.17817e+06 1.25822e+07 139 1.25542e+07 7.95124e+06 0.00256421 1.26475e+07 50.1851 0.00512283 0.994828 0 50.2052 GTEX-11TUW-2226-SM-5EQL9 2 B1 2 pieces, spermatogenesis is present, peritubular fibrosis and some hyalinization of tubules 6.4 Testis Testis 0000473 783 912 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.989935 265799 0.929802 0.992076 0.720435 31968 1 76 0.0021123 149 0 7.25970e+07 0.0699062 674977 7.31769e+07 1.02712e+07 32021 3.61434e+07 0 0.209367 0.992076 0.714727 7.25970e+07 0.00292431 1.51286e+07 1.24041e+07 1.51227e+07 157 1.51589e+07 1.0569e+07 0.00251743 1.52354e+07 50.1258 0.00922391 0.994218 0 49.9902 GTEX-11TUW-2326-SM-5EQMO 2 B1 6 pieces, predominantly muscularis (target) with few strips of markedly autolyzed mucosa (not target) 5.9 Colon Colon - Sigmoid 0001159 787 908 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.991127 536132 0.95155 0.993204 0.778378 22482 1 76 0.00202865 162 0 7.36655e+07 0.0482618 797084 7.41695e+07 8.4481e+06 22507 3.66389e+07 0 0.173172 0.993204 0.773088 7.36655e+07 0.0032868 1.56547e+07 2.12738e+07 1.57578e+07 188 1.56714e+07 1.00508e+07 0.00265641 1.59e+07 50.3621 0.0107468 0.995281 0 50.1642 GTEX-11TUW-2426-SM-5EQKB 1 B1 2 pieces, salivary gland represents ~20% of the tissue, remainder is skeletal muscle, stroma, fat, nerve and small focus of lip/squamous epithelium 8.1 Salivary Gland Minor Salivary Gland 0006330 794 901 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.983677 261226 0.974575 0.985979 0.789011 23947 1 76 0.00276059 314 0 9.39343e+07 0.0230712 204710 9.52701e+07 1.30136e+07 23979 4.66399e+07 0 0.185564 0.985979 0.777948 9.39343e+07 0.00397054 2.14544e+07 3.26554e+07 2.14001e+07 295 2.14465e+07 1.53343e+07 0.00336415 2.16179e+07 50.1989 0.00214873 0.988281 0 49.9367 GTEX-11TUW-2526-SM-5EQKN 1 B1 2 pieces, ~5% of one piece is fibrous tissue 8.5 Muscle Muscle - Skeletal 0011907 819 876 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.991816 181893 0.982449 0.993823 0.873625 19538 1 76 0.001783 201 0 7.96876e+07 0.01731 767035 8.01829e+07 1.10899e+07 19542 3.96959e+07 0 0.108824 0.993823 0.868228 7.96876e+07 0.00274052 1.73857e+07 1.19375e+07 1.72306e+07 242 1.72465e+07 1.59514e+07 0.0022608 1.75175e+07 50.3898 0.00956606 0.995829 0 49.776 GTEX-11TUW-2626-SM-5EQKZ 0 B1 2 pieces, one piece is ~20% tendon/fibrous tissue 6.8 Adipose Tissue Adipose - Subcutaneous 0002190 822 873 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.991709 189367 0.975035 0.993507 0.814368 22447 1 76 0.00202885 208 0 7.77909e+07 0.0246437 369219 7.82993e+07 1.0148e+07 22475 3.87414e+07 0 0.160667 0.993507 0.80908 7.77909e+07 0.00297443 1.71799e+07 7.16676e+06 1.72513e+07 206 1.72351e+07 1.35197e+07 0.00250079 1.7333e+07 50.1416 0.00471548 0.995304 0 50.1036 GTEX-11TUW-2726-SM-5EQLC 1 B1 6 pieces, include 5-10% attached and internal adipose tissue, squamous epithelium measures 40-50 microns 6.5 Skin Skin - Sun Exposed (Lower leg) 0004264 824 871 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4790 02/19/2014 TruSeq.v1 EXCLUDE 0.992373 191217 0.974137 0.994218 0.80565 23544 1 76 0.00210855 182 0 7.83388e+07 0.0255753 458018 7.87944e+07 1.02481e+07 23565 3.9013e+07 0 0.168486 0.994218 0.800992 7.83388e+07 0.00309066 1.72718e+07 8.46266e+06 1.73385e+07 195 1.73402e+07 1.40447e+07 0.0025987 1.74059e+07 50.0945 0.00581283 0.996063 0 50.0964 GTEX-11TUW-2726-SM-E9J4M 1 B1 6 pieces, include 5-10% attached and internal adipose tissue, squamous epithelium measures 40-50 microns 8 Skin Skin - Sun Exposed (Lower leg) 0004264 824 871 BP-80997 RNA Extraction from Paxgene-derived Lysate Plate Based 11/29/2016 LCSET-10739 03/30/2017 TruSeq.v1 RNASEQ 0.985093 414706 0.974562 0.986052 0.816461 23041 1 76 0.00183478 208 0 7.96125e+07 0.0251542 529755 8.07387e+07 4.16901e+06 23062 3.96511e+07 0 0.158102 0.986052 0.805073 7.96125e+07 0.00275361 1.744e+07 7.4919e+06 1.75751e+07 200 1.75376e+07 1.44632e+07 0.00229375 1.7555e+07 50.0248 0.00656135 0.98701 0 50.1929 GTEX-11TUW-2926-SM-5BC59 1 B1 2 pieces, one piece demonstrates calcific atherosclerosis with narrowing of the lumen, second piece has focal medial calcification (Monckeberg's sclerosis) 6.6 Blood Vessel Artery - Tibial 0007610 827 868 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.98792 288765 0.970168 0.991757 0.771408 22325 1 76 0.00267584 123 0 5.97945e+07 0.0295183 181190 6.02915e+07 1.4276e+07 22353 2.96936e+07 0 0.198761 0.991757 0.765049 5.97945e+07 0.00495722 1.29092e+07 5.90948e+06 1.30426e+07 133 1.30849e+07 9.85077e+06 0.00381212 1.30851e+07 50.0003 0.00300523 0.995594 0 50.257 GTEX-11TUW-3026-SM-5EGKM 1 B1 1 piece, adenohypophysis 7.1 Pituitary Pituitary 0000007 862 833 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.989342 297052 0.963293 0.992251 0.759892 24519 1 76 0.00195307 159 0 7.54706e+07 0.0362546 229723 7.606e+07 6.57413e+06 24549 3.75239e+07 0 0.203401 0.992251 0.754004 7.54706e+07 0.0031054 1.63445e+07 8.63218e+06 1.64915e+07 181 1.65324e+07 1.13739e+07 0.00252754 1.65099e+07 49.9659 0.00302029 0.995161 0 50.2238 GTEX-11TUW-3126-SM-5GU4Y 0 B1 3 pieces , includes small detached fragment of cerebellum 5.8 Brain Brain - Cortex 0001870 863 832 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4803 02/19/2014 TruSeq.v1 EXCLUDE 0.989622 316825 0.968965 0.992269 0.836988 22093 1 76 0.00193722 161 0 6.24045e+07 0.0308161 6.66903e+06 6.28907e+07 3.69507e+06 22106 3.10273e+07 0 0.131977 0.992269 0.830518 6.24045e+07 0.00297751 1.38361e+07 1.19558e+07 1.39888e+07 198 1.38236e+07 6.4787e+06 0.00245598 1.41504e+07 50.584 0.106042 0.994916 0 50.2743 GTEX-11UD1-0001-SM-58Q8D B1 Blood Whole Blood 0013756 1268 BP-40136 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/25/2013 LCSET-4574 01/20/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-11UD1-0001-SM-5DWT6 B1 Blood Whole Blood 0013756 1268 BP-40136 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/25/2013 GTEx_OM25_Dec_01 01/29/2014 Illumina OMNI SNP Array OMNI GTEX-11UD1-0001-SM-6WBTY B1 Blood Whole Blood 0013756 1268 BP-40136 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/25/2013 LCSET-6056 09/21/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-11UD1-0008-SM-5S2P6 B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 1354 BP-45530 RNA isolation_Trizol Manual (Cell Pellet) 11/06/2013 LCSET-4988 04/01/2014 TruSeq.v1 RNASEQ 0.994479 343705 0.970061 0.995501 0.864079 19594 1 76 0.00159409 137 0 6.15934e+07 0.0296798 217471 6.18717e+07 3.58641e+06 19604 3.07025e+07 0 0.105982 0.995501 0.860191 6.15934e+07 0.00226921 1.34974e+07 1.30936e+07 1.36679e+07 144 1.36158e+07 1.43818e+07 0.00193131 1.36228e+07 50.0129 0.00351487 0.996523 0 50.3138 GTEX-11UD1-0011-R1b-SM-5BC7D B1, A1 8.1 Brain Brain - Hippocampus 0001954 1267 BP-43229 RNA isolation_PAXgene Tissue miRNA 09/06/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.986089 469114 0.957632 0.991087 0.831943 22064 1 76 0.00309981 141 0 5.40629e+07 0.0421135 3.87785e+06 5.45491e+07 1.42879e+07 22079 2.68177e+07 0 0.125689 0.991087 0.824528 5.40629e+07 0.00581592 1.18956e+07 1.2108e+07 1.18557e+07 153 1.17603e+07 5.47425e+06 0.00445102 1.22511e+07 51.0221 0.0710891 0.996085 0 49.9162 GTEX-11UD1-0011-R2b-SM-5BC6O B1, A1 8.1 Brain Brain - Substantia nigra 0002038 1267 BP-43229 RNA isolation_PAXgene Tissue miRNA 09/06/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.985659 460018 0.958681 0.991071 0.829677 22405 1 76 0.00295713 148 0 6.01731e+07 0.0410026 3.96415e+06 6.07152e+07 1.50756e+07 22422 2.98422e+07 0 0.129004 0.991071 0.822269 6.01731e+07 0.00562691 1.31837e+07 1.1432e+07 1.32668e+07 162 1.32236e+07 7.21502e+06 0.00428473 1.35418e+07 50.5943 0.0652908 0.996483 0 50.1572 GTEX-11UD1-0011-R3a-SM-5BC6S B1, A1 6.3 Brain Brain - Anterior cingulate cortex (BA24) 0009835 1267 BP-43229 RNA isolation_PAXgene Tissue miRNA 09/06/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.985091 584161 0.964852 0.990577 0.853458 22186 1 76 0.00320704 184 0 6.98231e+07 0.0348505 7.14162e+06 7.04874e+07 1.76895e+07 22198 3.46103e+07 0 0.111394 0.990577 0.845415 6.98231e+07 0.00588177 1.53792e+07 2.10739e+07 1.5241e+07 214 1.5154e+07 6.35087e+06 0.00453699 1.58064e+07 51.0535 0.101318 0.996063 0 49.7744 GTEX-11UD1-0011-R5b-SM-5P9FP B1, A1 7.2 Brain Brain - Caudate (basal ganglia) 0001873 1267 BP-43229 RNA isolation_PAXgene Tissue miRNA 09/06/2013 LCSET-4914 03/27/2014 TruSeq.v1 RNASEQ 0.987817 601060 0.968241 0.988075 0.819655 22657 1 76 0.00359178 375 0 1.2411e+08 0.0315896 1.28154e+07 1.25608e+08 4.22272e+06 22674 6.18328e+07 0 0.148586 0.988075 0.809881 1.2411e+08 0.00413925 2.59942e+07 6.7559e+07 2.72516e+07 363 2.65343e+07 9.31168e+06 0.00386545 2.67272e+07 50.1811 0.102027 0.988333 0 51.1808 GTEX-11UD1-0126-SM-5PNYG 1 B1 6 pieces, well trimmed, squamous epithelium measures ~40-45 microns 5.7 Skin Skin - Sun Exposed (Lower leg) 0004264 1357 1116 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.990221 200666 0.976014 0.990919 0.831624 24032 1 76 0.00351851 278 0 9.8781e+07 0.0237313 769555 9.96863e+07 3.16965e+06 24053 4.91695e+07 0 0.14439 0.990919 0.824072 9.8781e+07 0.00415596 2.17329e+07 1.03061e+07 2.2057e+07 262 2.19008e+07 1.68122e+07 0.00383701 2.19578e+07 50.065 0.00771977 0.991616 0 50.37 GTEX-11UD1-0226-SM-5EQKL 0 B1 2 pieces, one is ~5-10% fibrovascular tissue, atypical cells ? fat necrosis 6.5 Adipose Tissue Adipose - Subcutaneous 0002190 1354 1120 BP-43823 RNA Extraction from Paxgene-derived Lysate Plate Based 09/20/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.991074 240837 0.974818 0.993174 0.77492 23929 1 76 0.00229583 166 0 7.95598e+07 0.024841 275268 8.01066e+07 1.01458e+07 23967 3.95992e+07 0 0.199898 0.993174 0.769631 7.95598e+07 0.00327537 1.74131e+07 8.00142e+06 1.75468e+07 182 1.75439e+07 1.37085e+07 0.00278457 1.75765e+07 50.0464 0.00343627 0.995275 0 50.1911 GTEX-11UD1-0326-SM-5EQKX 0 B1 2 pieces, ~10% internal fat, scattered atrophic fibers 6.3 Muscle Muscle - Skeletal 0011907 1364 1111 BP-43823 RNA Extraction from Paxgene-derived Lysate Plate Based 09/20/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.990965 205239 0.970677 0.993507 0.801729 22534 1 76 0.00215368 132 0 7.58109e+07 0.0290588 526750 7.63063e+07 1.07759e+07 22557 3.77317e+07 0 0.168948 0.993507 0.796523 7.58109e+07 0.00317391 1.60269e+07 8.07219e+06 1.61302e+07 155 1.6104e+07 1.49648e+07 0.00266249 1.623e+07 50.1948 0.0069031 0.99605 0 50.1605 GTEX-11UD2-0001-SM-58Q8A B1 Blood Whole Blood 0013756 829 BP-40136 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/25/2013 LCSET-4574 01/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-11UD2-0001-SM-5DWT3 B1 Blood Whole Blood 0013756 829 BP-40136 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/25/2013 GTEx_OM25_Dec_01 01/29/2014 Illumina OMNI SNP Array OMNI GTEX-11UD2-0001-SM-6WBTW B1 Blood Whole Blood 0013756 829 BP-40136 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/25/2013 LCSET-6056 09/20/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-11UD2-0005-SM-5NQ9B B1 8.6 Blood Whole Blood 0013756 829 BP-40138 RNA isolation_PAXgene Blood RNA (Manual) 06/25/2013 LCSET-4906 03/22/2014 TruSeq.v1 RNASEQ 0.982115 268610 0.981745 0.983473 0.800747 18534 1 76 0.00234407 104 0 6.88495e+07 0.017573 132036 7.00064e+07 5.71466e+06 18542 3.42807e+07 0 0.180998 0.983473 0.787513 6.88495e+07 0.00342091 1.59751e+07 8.13331e+07 1.61787e+07 121 1.61601e+07 1.70674e+07 0.00288174 1.60949e+07 49.8989 0.00188606 0.984832 0 50.3166 GTEX-11UD2-0008-SM-5S2P7 B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 845 BP-45530 RNA isolation_Trizol Manual (Cell Pellet) 11/06/2013 LCSET-4988,LCSET-5335 04/11/2014 TruSeq.v1 RNASEQ 0.993804 477453 0.970111 0.995106 0.867813 20134 1 76 0.00138014 207 0 8.11495e+07 0.0296643 441317 8.15486e+07 4.18523e+06 20142 4.04225e+07 0 0.102297 0.995106 0.863566 8.11495e+07 0.00213255 1.76932e+07 1.74366e+07 1.81033e+07 211 1.80109e+07 1.79335e+07 0.00175585 1.79105e+07 49.8603 0.0054117 0.996408 0 50.5728 GTEX-11UD2-0011-R9b-SM-DO926 B1, A1 6.4 Brain Brain - Spinal cord (cervical c-1) 0006469 834 BP-43067 RNA isolation_PAXgene Tissue miRNA 09/04/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.994202 524472 0.960994 0.994955 0.831983 21854 1 76 0.00177377 220 0 7.35431e+07 0.038665 2.5071e+06 7.3916e+07 4.59382e+06 21870 3.6654e+07 0 0.129012 0.994955 0.827785 7.35431e+07 0.00235682 1.63429e+07 1.02154e+07 1.66231e+07 216 1.64184e+07 1.10269e+07 0.00206507 1.66073e+07 50.286 0.0339183 0.995709 0 50.425 GTEX-11UD2-0126-SM-5EQL2 0 B1 2 pieces, ~10% fibrovacular tissue, rep. dlineated 7.2 Adipose Tissue Adipose - Subcutaneous 0002190 842 1342 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.991948 272493 0.975329 0.994 0.771572 22831 1 76 0.00212192 166 0 7.71752e+07 0.0243551 352782 7.7641e+07 9.32808e+06 22858 3.84101e+07 0 0.203757 0.994 0.766943 7.71752e+07 0.00311733 1.6975e+07 7.02931e+06 1.70656e+07 180 1.70648e+07 1.27951e+07 0.00261859 1.71296e+07 50.0948 0.00454376 0.996052 0 50.1331 GTEX-11UD2-0226-SM-5EQKY 0 B1 6 pieces, squmous epithelium is ~60-70 microns, minimal fat 7.4 Skin Skin - Sun Exposed (Lower leg) 0004264 845 1339 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.990747 202118 0.97592 0.992941 0.791703 22879 1 76 0.00211074 204 0 7.82323e+07 0.0238258 502667 7.87885e+07 9.75448e+06 22910 3.8929e+07 0 0.184217 0.992941 0.786115 7.82323e+07 0.00335391 1.7093e+07 8.66654e+06 1.71698e+07 186 1.71606e+07 1.36617e+07 0.00273095 1.72714e+07 50.1609 0.00637996 0.995135 0 50.1121 GTEX-11UD2-0326-SM-5EQLE 0 B1 2 pieces, %-10% adherent/interstitial fat/ fasica 8.1 Muscle Muscle - Skeletal 0011907 849 1335 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.990824 224161 0.984048 0.993451 0.850901 19748 1 76 0.00177382 199 0 8.05763e+07 0.0157464 833293 8.11075e+07 1.06134e+07 19759 4.01151e+07 0 0.133147 0.993451 0.845328 8.05763e+07 0.00274472 1.75783e+07 9.08697e+06 1.76355e+07 229 1.75874e+07 1.60236e+07 0.00225799 1.78256e+07 50.3363 0.0102739 0.996077 0 50.0813 GTEX-11UD2-0426-SM-5EQ5W 0 B1 2 pieces, discontinous rim of adherent fat up to ~1.5mm 7.2 Nerve Nerve - Tibial 0001323 852 1332 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.988719 316524 0.969555 0.991836 0.757526 23436 1 76 0.00210261 152 0 7.04505e+07 0.0301597 190055 7.10304e+07 8.80661e+06 23468 3.49998e+07 0 0.212029 0.991836 0.751341 7.04505e+07 0.00328793 1.54039e+07 6.70362e+06 1.55222e+07 160 1.55322e+07 1.1463e+07 0.00269341 1.56068e+07 50.1198 0.00267569 0.994952 0 50.1912 GTEX-11UD2-0526-SM-5GU69 0 B1 2 pieces, clean specimens; ~0.5mm focal adherent fascia on one, delineated 7.7 Blood Vessel Artery - Tibial 0007610 856 1328 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4803,LCSET-5131 03/08/2014 TruSeq.v1 RNASEQ 0.989171 503163 0.975562 0.992389 0.827936 22319 1 76 0.00231422 277 0 1.03482e+08 0.0240633 282269 1.04276e+08 5.79558e+06 22340 5.13912e+07 0 0.147626 0.992389 0.821635 1.03482e+08 0.00329462 2.22105e+07 7.65809e+06 2.24181e+07 280 2.24065e+07 1.97867e+07 0.00280283 2.25393e+07 50.1478 0.00270694 0.995607 0 50.2325 GTEX-11UD2-0626-SM-5GU6L 1 B1 2 pieces, no significant findings 6.2 Thyroid Thyroid 0002046 881 1303 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.990807 182698 0.964435 0.992837 0.708773 22560 1 76 0.00203226 113 0 5.63829e+07 0.0353487 187591 5.67897e+07 3.54177e+06 22587 2.80621e+07 0 0.255662 0.992837 0.703696 5.63829e+07 0.00284445 1.23116e+07 5.87536e+06 1.2388e+07 123 1.23829e+07 7.93269e+06 0.00243753 1.24271e+07 50.0889 0.00330326 0.994867 0 50.1546 GTEX-11UD2-0726-SM-5EQ69 2 B1 2 pieces, moderate congestion 6.9 Lung Lung 0008952 889 1295 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.989036 248837 0.970148 0.991755 0.699962 23749 1 76 0.00251994 120 0 6.54026e+07 0.0292077 227712 6.59464e+07 8.25048e+06 23786 3.24956e+07 0 0.270186 0.991755 0.694191 6.54026e+07 0.0035314 1.43521e+07 7.13196e+06 1.44661e+07 134 1.44836e+07 9.63372e+06 0.00302428 1.45032e+07 50.0339 0.00345299 0.994474 0 50.1978 GTEX-11UD2-0826-SM-5EQKS 1 B1 6 pieces, adherent serosa/fat up to ~1mm 6.5 Blood Vessel Artery - Aorta 0001496 894 1290 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.988058 285149 0.9692 0.990796 0.788566 22573 1 76 0.00215949 203 0 8.53002e+07 0.0304841 225702 8.60926e+07 1.22267e+07 22597 4.24099e+07 0 0.180634 0.990796 0.781308 8.53002e+07 0.00331263 1.82959e+07 8.45466e+06 1.85113e+07 206 1.84901e+07 1.45582e+07 0.00273447 1.85468e+07 50.0765 0.00262162 0.993535 0 50.2926 GTEX-11UD2-0926-SM-5CVL6 1 B1 2 pieces, no abnormalities 6.1 Heart Heart - Atrial Appendage 0006631 897 1287 BP-44525 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.986952 265100 0.981481 0.990542 0.831356 22381 1 76 0.00472655 265 0 8.67068e+07 0.0183536 5.9282e+06 8.75347e+07 1.61957e+07 22401 4.3053e+07 0 0.150125 0.990542 0.823493 8.67068e+07 0.00686804 1.908e+07 1.62264e+07 1.89871e+07 266 1.89952e+07 1.06076e+07 0.00579341 1.93234e+07 50.4283 0.067724 0.994132 0 49.878 GTEX-11UD2-1126-SM-5EQM6 1 B1 2 pieces, clean specimens; nubbin of adherent fat on one ~1.5mm 7.3 Blood Vessel Artery - Coronary 0001621 906 1278 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.988583 296267 0.96896 0.991291 0.77873 22619 1 76 0.00220518 158 0 7.75612e+07 0.0307301 210640 7.82426e+07 1.00345e+07 22644 3.85561e+07 0 0.190229 0.991291 0.771948 7.75612e+07 0.00330418 1.66549e+07 6.41099e+06 1.67675e+07 174 1.67698e+07 1.34124e+07 0.00275318 1.68585e+07 50.1319 0.00269214 0.993998 0 50.1683 GTEX-11UD2-1226-SM-5EQMI 1 B1 6 pieces, all muscularis, good specimens 6.8 Esophagus Esophagus - Muscularis 0004648 927 1257 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.98892 278113 0.965593 0.991454 0.763287 22720 1 76 0.00215414 150 0 7.04908e+07 0.0342259 1.12622e+06 7.10984e+07 9.03203e+06 22748 3.50453e+07 0 0.202306 0.991454 0.756764 7.04908e+07 0.00342043 1.52782e+07 7.98739e+06 1.52986e+07 177 1.52613e+07 8.65126e+06 0.00278567 1.54851e+07 50.3639 0.0158403 0.993988 0 50.0333 GTEX-11UD2-1526-SM-5EQLQ 1 B1 6 pieces, all muscularis 6.1 Esophagus Esophagus - Gastroesophageal Junction 0004550 932 1252 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.989466 209047 0.967135 0.991874 0.78667 21940 1 76 0.00210546 148 0 6.53267e+07 0.0327194 1.55346e+06 6.58619e+07 8.36932e+06 21958 3.24862e+07 0 0.180466 0.991874 0.780278 6.53267e+07 0.00342429 1.43087e+07 6.76693e+06 1.41994e+07 182 1.41392e+07 6.74053e+06 0.00276327 1.45205e+07 50.6652 0.0235867 0.994282 0 49.8084 GTEX-11UD2-1626-SM-5EQM3 1 B1 2 pieces, diffuse macrovesicular steatosis involves ~80% of parenchyma 5.8 Liver Liver 0001114 945 1239 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4790 02/19/2014 TruSeq.v1 EXCLUDE 0.988019 497381 0.964751 0.990095 0.801991 22234 1 76 0.00222029 198 0 7.14242e+07 0.0351033 4.3827e+06 7.21388e+07 8.69936e+06 22252 3.55366e+07 0 0.16276 0.990095 0.794048 7.14242e+07 0.00350708 1.58794e+07 1.94613e+07 1.57432e+07 219 1.56599e+07 7.09223e+06 0.00286234 1.61102e+07 50.7087 0.0607538 0.992171 0 49.7846 GTEX-11UD2-2526-SM-5CVNU 0 B1 6 pieces, minimal dermal fat; squamous epithelium is ~60-70 microns 5.9 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 986 1198 BP-44525 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.981488 232458 0.971692 0.985374 0.747335 23923 1 76 0.00489258 143 0 7.33746e+07 0.028109 388377 7.44636e+07 1.24581e+07 23955 3.63915e+07 0 0.224358 0.985374 0.736404 7.33746e+07 0.00694684 1.60788e+07 8.58649e+06 1.61728e+07 148 1.62099e+07 1.08664e+07 0.00591566 1.6319e+07 50.1677 0.00521566 0.989261 0 50.1456 GTEX-11UD2-2826-SM-5GU6X 2 B1 2 pieces, autolysis variable from mild--moderate/severe. Spermatogenesis present, but appears reduced 6.1 Testis Testis 0000473 1004 1180 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4803 02/19/2014 TruSeq.v1 EXCLUDE 0.987117 307044 0.94875 0.990663 0.730206 29338 1 76 0.00205268 132 0 6.69569e+07 0.0509944 892523 6.75879e+07 4.76718e+06 29384 3.32653e+07 0 0.218543 0.990663 0.723389 6.69569e+07 0.00299434 1.45074e+07 7.80121e+06 1.46352e+07 151 1.46689e+07 9.20949e+06 0.00252182 1.46942e+07 50.043 0.0132054 0.99421 0 50.2192 GTEX-11VI4-0001-SM-5S2OI B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -106 BP-45438 RNA isolation_Trizol Manual (Cell Pellet) 11/04/2013 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.992322 1.13412e+06 0.954862 0.994091 0.803096 20284 1 76 0.00178834 138 0 6.08758e+07 0.0448412 485747 6.12376e+07 4.15548e+06 20301 3.03012e+07 0 0.151766 0.994091 0.798351 6.08758e+07 0.00260412 1.32959e+07 1.16534e+07 1.34027e+07 134 1.33726e+07 1.31676e+07 0.00219551 1.34425e+07 50.1303 0.00793217 0.99586 0 50.2001 GTEX-11VI4-0003-SM-58Q81 B1 Blood Whole Blood 0013756 -106 BP-40280 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/28/2013 LCSET-4574 01/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-11VI4-0003-SM-5DWTX B1 Blood Whole Blood 0013756 -106 BP-40280 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/28/2013 GTEx_OM25_Dec_01 01/28/2014 Illumina OMNI SNP Array OMNI GTEX-11VI4-0003-SM-6WBUJ B1 Blood Whole Blood 0013756 -106 BP-40280 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/28/2013 LCSET-6056 09/20/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-11VI4-0006-SM-5N9D8 B1 8.9 Blood Whole Blood 0013756 -106 BP-40286 RNA isolation_PAXgene Blood RNA (Manual) 06/28/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.98389 1.19831e+06 0.937239 0.98524 0.776193 19066 1 76 0.00301292 117 0 8.08226e+07 0.0622677 190350 8.20334e+07 3.9466e+06 19075 4.02395e+07 0 0.161046 0.98524 0.764736 8.08226e+07 0.00372778 1.76219e+07 9.16238e+07 1.79178e+07 139 1.79132e+07 1.79155e+07 0.00336986 1.77652e+07 49.7926 0.0023204 0.98659 0 50.4163 GTEX-11VI4-0126-SM-5GU6Z 1 B1 2 pieces; slight congestion 7.2 Spleen Spleen 0002106 102 1171 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.987754 246089 0.965235 0.990886 0.787901 22871 1 76 0.00266427 117 0 5.37394e+07 0.0326837 326936 5.42337e+07 3.8242e+06 22888 2.66516e+07 0 0.177334 0.990886 0.78072 5.37394e+07 0.00371951 1.18785e+07 9.20292e+06 1.19285e+07 128 1.19374e+07 8.64498e+06 0.00319022 1.20332e+07 50.1998 0.00602828 0.994017 0 50.105 GTEX-11VI4-0226-SM-5GU6C 1 B1 2 pieces 7.4 Thyroid Thyroid 0002046 105 1168 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.9906 191903 0.967657 0.992831 0.761985 22451 1 76 0.00187169 117 0 5.40063e+07 0.0319914 317189 5.43963e+07 3.34866e+06 22476 2.68778e+07 0 0.205672 0.992831 0.756523 5.40063e+07 0.00277364 1.18703e+07 4.66760e+06 1.19245e+07 124 1.19108e+07 8.83966e+06 0.00232165 1.19971e+07 50.1804 0.00583108 0.995062 0 50.114 GTEX-11VI4-0326-SM-5EQ6L 1 B1 6 pieces; mucosa absent on all 6 pieces, can only be used for muscularis propria assessment 7.4 Stomach Stomach 0000945 119 1154 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.990985 204700 0.97519 0.993562 0.821829 21807 1 76 0.001808 134 0 5.77924e+07 0.0245519 539915 5.81669e+07 7.46116e+06 21826 2.87577e+07 0 0.153361 0.993562 0.816538 5.77924e+07 0.00276846 1.25712e+07 4.98995e+06 1.26932e+07 140 1.26659e+07 1.03116e+07 0.00228699 1.2741e+07 50.1478 0.00928218 0.996139 0 50.2415 GTEX-11VI4-0426-SM-5EGHZ 1 B1 2 pieces; 10% individual fat cells diffusely distributed amonst parenchyma 7.8 Pancreas Pancreas 0001150 113 1160 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.986542 175818 0.978184 0.99087 0.853667 21007 1 76 0.00225296 89 0 5.893e+07 0.0216253 285072 5.9473e+07 9.01598e+06 21021 2.92762e+07 0 0.124517 0.99087 0.845873 5.893e+07 0.00537531 1.35162e+07 1.53228e+07 1.35277e+07 102 1.35271e+07 1.66485e+07 0.00380731 1.37729e+07 50.4501 0.0047933 0.995198 0 50.0212 GTEX-11VI4-0526-SM-5EQ48 0 B1 6 pieces; well preserved, well dissected 9 Esophagus Esophagus - Mucosa 0006920 126 1147 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.990678 302535 0.974811 0.993253 0.820563 23228 1 76 0.00194812 170 0 7.72464e+07 0.0248393 766288 7.77712e+07 9.87557e+06 23247 3.84356e+07 0 0.154248 0.993253 0.815026 7.72464e+07 0.00289727 1.70952e+07 9.18848e+06 1.72643e+07 200 1.72451e+07 1.40772e+07 0.00242147 1.73011e+07 50.081 0.00985311 0.995827 0 50.2461 GTEX-11VI4-0626-SM-5EQLO 0 B1 6 pieces well dissected 8.2 Esophagus Esophagus - Muscularis 0004648 129 1144 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.992631 185667 0.976087 0.994536 0.836873 21865 1 76 0.00186731 161 0 7.2185e+07 0.0236695 871217 7.25815e+07 9.8656e+06 21886 3.59555e+07 0 0.139214 0.994536 0.8323 7.2185e+07 0.00275086 1.55296e+07 7.09151e+06 1.55746e+07 201 1.55202e+07 1.21909e+07 0.00230824 1.57111e+07 50.3055 0.0120033 0.996442 0 50.0724 GTEX-11VI4-0726-SM-5GU5B 0 B1 6 pieces 8.7 Vagina Vagina 0000996 135 1138 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.991962 220713 0.974607 0.99384 0.802265 22740 1 76 0.00193976 127 0 5.86762e+07 0.0250665 311303 5.90399e+07 3.63049e+06 22762 2.91969e+07 0 0.172342 0.99384 0.797323 5.86762e+07 0.00276987 1.30934e+07 6.61126e+06 1.31762e+07 133 1.31530e+07 1.12716e+07 0.00235403 1.32235e+07 50.1335 0.00527276 0.995718 0 50.1577 GTEX-11VI4-0826-SM-5GU5N 0 B1 6 pieces; most are small, e.g. 3x2mm, largest 6x3mm 7.9 Esophagus Esophagus - Gastroesophageal Junction 0004550 141 1132 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.991732 282641 0.974993 0.994092 0.822214 22613 1 76 0.00175511 158 0 6.74796e+07 0.024738 616683 6.78806e+07 4.22648e+06 22637 3.35733e+07 0 0.15278 0.994092 0.817356 6.74796e+07 0.00270491 1.46364e+07 5.45984e+06 1.47676e+07 166 1.4697e+07 1.17354e+07 0.00222888 1.48611e+07 50.2776 0.00908482 0.996452 0 50.2231 GTEX-11VI4-1026-SM-5EQM1 0 B1 2 pieces; numerous corpora albicans comprise 50 and 25% of samples 8.3 Ovary Ovary 0000992 143 1130 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.993106 238776 0.97133 0.994689 0.803938 23040 1 76 0.00186869 218 0 8.19882e+07 0.0283538 465070 8.24259e+07 1.03157e+07 23071 4.08473e+07 0 0.167392 0.994689 0.799668 8.19882e+07 0.00267227 1.80797e+07 8.79835e+06 1.81814e+07 216 1.81539e+07 1.61835e+07 0.00226984 1.82333e+07 50.1091 0.00564228 0.996272 0 50.1402 GTEX-11VI4-1126-SM-5EQMD 0 B1 6 pieces of skin 7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 146 1127 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.991708 198581 0.971127 0.993751 0.798507 23553 1 76 0.00195144 180 0 7.48512e+07 0.0286934 669339 7.53218e+07 9.45469e+06 23580 3.72719e+07 0 0.17262 0.993751 0.793517 7.48512e+07 0.00301702 1.64238e+07 8.70999e+06 1.65245e+07 191 1.64585e+07 1.20897e+07 0.00248314 1.66374e+07 50.2702 0.00888639 0.995794 0 50.1529 GTEX-11VI4-1226-SM-5EQMP 1 B1 2 pieces; large pieces with interior holes 6.2 Adipose Tissue Adipose - Visceral (Omentum) 0010414 149 1124 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.992061 153811 0.978346 0.993822 0.822876 22783 1 76 0.001882 269 0 8.54149e+07 0.0214644 2.19268e+06 8.59459e+07 1.03031e+07 22802 4.25522e+07 0 0.155471 0.993822 0.817792 8.54149e+07 0.00296633 1.88374e+07 1.34272e+07 1.88266e+07 307 1.86769e+07 1.06772e+07 0.00242321 1.91291e+07 50.5981 0.0255123 0.995582 0 49.9857 GTEX-11VI4-1426-SM-5GU6O 1 B1 6 pieces; 5 of 6 pieces with mucosa [not target] 7.6 Colon Colon - Sigmoid 0001159 162 1111 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.987833 334547 0.973119 0.991351 0.814864 24150 1 76 0.00207152 177 0 7.62249e+07 0.025819 813951 7.689e+07 5.3387e+06 24170 3.78362e+07 0 0.158254 0.991351 0.807817 7.62249e+07 0.00312597 1.67574e+07 8.15088e+06 1.6795e+07 199 1.67841e+07 1.22378e+07 0.00259687 1.70222e+07 50.3521 0.0105859 0.994869 0 50.056 GTEX-11VI4-1526-SM-5EQKC 1 B1 6 pieces well dissected full thickness of colon 8 Colon Colon - Transverse 0001157 166 1107 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.991357 252838 0.973881 0.993599 0.801526 23446 1 76 0.00197064 172 0 7.27666e+07 0.025712 1.54038e+06 7.32354e+07 9.44335e+06 23472 3.62175e+07 0 0.172355 0.993599 0.796396 7.27666e+07 0.00311134 1.61159e+07 1.25843e+07 1.61664e+07 202 1.60812e+07 1.03903e+07 0.0025397 1.63599e+07 50.4295 0.0210333 0.995842 0 50.0782 GTEX-11VI4-1626-SM-5EQKO 1 B1 6 pieces; abundant lymphoid tissue [delineated] 8.2 Small Intestine Small Intestine - Terminal Ileum 0001211 177 1096 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.991428 177042 0.962736 0.993209 0.745943 24419 1 76 0.00217661 164 0 7.38755e+07 0.0367925 490609 7.43807e+07 9.32411e+06 24456 3.67877e+07 0 0.216792 0.993209 0.740878 7.38755e+07 0.00301548 1.62453e+07 9.12892e+06 1.62411e+07 168 1.62393e+07 1.16609e+07 0.00259529 1.63728e+07 50.2048 0.00659592 0.994989 0 49.9936 GTEX-11VI4-1726-SM-5CVLH 0 B1 6 pieces; internal fatty island make up 10% 6.7 Skin Skin - Sun Exposed (Lower leg) 0004264 315 958 BP-44525 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.984957 215858 0.970524 0.989505 0.77906 24442 1 76 0.00473089 170 0 7.81318e+07 0.0292662 492124 7.89604e+07 1.60099e+07 24467 3.87549e+07 0 0.191464 0.989505 0.770884 7.81318e+07 0.00687557 1.69709e+07 8.76681e+06 1.70629e+07 165 1.71329e+07 1.25785e+07 0.0057983 1.72329e+07 50.1455 0.00623254 0.994054 0 50.1352 GTEX-11VI4-1926-SM-5CVLI 1 B1 2 pieces 7.6 Muscle Muscle - Skeletal 0011907 321 952 BP-44525 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.988648 257066 0.983142 0.991998 0.875438 20046 1 76 0.0044587 178 0 8.00823e+07 0.0166344 1.31041e+06 8.07283e+07 1.57836e+07 20056 3.97881e+07 0 0.107703 0.991998 0.868433 8.00823e+07 0.00633124 1.74694e+07 9.80979e+06 1.74082e+07 200 1.74555e+07 1.64951e+07 0.00539181 1.76676e+07 50.302 0.0162323 0.995348 0 49.9123 GTEX-11VI4-2026-SM-5CVLJ 0 B1 2 pieces; well trimmed 7.3 Blood Vessel Artery - Tibial 0007610 327 946 BP-44525 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.986824 273049 0.97844 0.990867 0.861245 20984 1 76 0.00454421 133 0 6.72236e+07 0.0211684 359808 6.78432e+07 1.20318e+07 20995 3.33396e+07 0 0.117195 0.990867 0.853379 6.72236e+07 0.00669186 1.44209e+07 5.1895e+06 1.44754e+07 145 1.45017e+07 1.37651e+07 0.00561365 1.46536e+07 50.2604 0.00530353 0.99491 0 50.0941 GTEX-11VI4-2126-SM-5EGI1 0 B1 2 pieces; small amount of peripheral fat 7.4 Nerve Nerve - Tibial 0001323 325 948 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.982383 171547 0.968732 0.987333 0.771957 23327 1 76 0.00232334 146 0 6.11964e+07 0.0310044 271677 6.19815e+07 9.13648e+06 23355 3.03699e+07 0 0.196774 0.987333 0.762179 6.11964e+07 0.00572651 1.34204e+07 5.81265e+06 1.3512e+07 139 1.35845e+07 9.91606e+06 0.00401639 1.36336e+07 50.0901 0.0043832 0.992284 0 50.17 GTEX-11WQC-0003-SM-58Q8N B1 Blood Whole Blood 0013756 600 BP-40386 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/03/2013 LCSET-4574 01/20/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-11WQC-0003-SM-5DWTG B1 Blood Whole Blood 0013756 600 BP-40386 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/03/2013 GTEx_OM25_Dec_01 01/29/2014 Illumina OMNI SNP Array OMNI GTEX-11WQC-0003-SM-6WBU8 B1 Blood Whole Blood 0013756 600 BP-40386 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/03/2013 LCSET-6056 09/20/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-11WQC-0006-SM-5LZVP B1 9.2 Blood Whole Blood 0013756 600 BP-40354 RNA isolation_PAXgene Blood RNA (Manual) 07/02/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.991038 427310 0.975773 0.992415 0.751628 20375 1 76 0.00314542 128 0 6.99994e+07 0.0236461 281983 7.05344e+07 3.31004e+06 20393 3.48255e+07 0 0.224145 0.992415 0.745927 6.99994e+07 0.00391579 1.57063e+07 2.35084e+07 1.57828e+07 135 1.58128e+07 1.32966e+07 0.00353007 1.57766e+07 49.9428 0.00399781 0.993792 0 50.1215 GTEX-11WQC-0008-SM-5SI6R B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 818 BP-45532 RNA isolation_Trizol Manual (Cell Pellet) 11/06/2013 LCSET-4995 04/05/2014 TruSeq.v1 RNASEQ 0.992824 359905 0.973053 0.994891 0.852546 20783 1 76 0.00178219 176 0 7.73612e+07 0.026647 353415 7.77585e+07 7.42335e+06 20798 3.85321e+07 0 0.120507 0.994891 0.84819 7.73612e+07 0.00277907 1.70934e+07 1.30182e+07 1.72233e+07 174 1.72143e+07 1.85121e+07 0.00227959 1.72671e+07 50.0766 0.00454503 0.996957 0 50.1892 GTEX-11WQC-0011-R10a-SM-57WCT B1, A1 5.9 Brain Brain - Frontal Cortex (BA9) 0009834 608 BP-43316 RNA isolation_PAXgene Tissue miRNA 09/09/2013 LCSET-4415 12/21/2013 TruSeq.v1 RNASEQ 0.989368 570981 0.957779 0.992742 0.837913 22212 1 76 0.00228549 153 0 6.28244e+07 0.0419326 4.32656e+06 6.32837e+07 7.54503e+06 22222 3.12321e+07 0 0.119866 0.992742 0.831832 6.28244e+07 0.00423608 1.36608e+07 1.7989e+07 1.37117e+07 187 1.36564e+07 6.1434e+06 0.00325747 1.39066e+07 50.454 0.0683677 0.996116 0 50.093 GTEX-11WQC-0011-R10a-SM-AHZ6D B1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 608 ChIP-Seq GTEX-11WQC-0011-R10a-SM-CYKQY B1, A1 5.9 Brain Brain - Frontal Cortex (BA9) 0009834 608 BP-43316 RNA isolation_PAXgene Tissue miRNA 09/09/2013 RIP-Seq GTEX-11WQC-0011-R11b-SM-57WD6 B1, A1 7.2 Brain Brain - Cerebellar Hemisphere 0002037 608 BP-43316 RNA isolation_PAXgene Tissue miRNA 09/09/2013 LCSET-4415 12/21/2013 TruSeq.v1 RNASEQ 0.989249 754951 0.943424 0.992083 0.751677 23233 1 76 0.00241818 267 0 8.33781e+07 0.0563084 2.87871e+06 8.40435e+07 1.07598e+07 23256 4.14532e+07 0 0.191747 0.992083 0.745726 8.33781e+07 0.00405043 1.79069e+07 2.22383e+07 1.79549e+07 256 1.7938e+07 7.53026e+06 0.00323197 1.81381e+07 50.2773 0.0342526 0.994917 0 50.0669 GTEX-11WQC-0011-R1b-SM-DO932 B1, A1 7 Brain Brain - Hippocampus 0001954 608 BP-43067 RNA isolation_PAXgene Tissue miRNA 09/04/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.993836 650305 0.964721 0.994921 0.820901 23350 1 76 0.00246781 371 0 9.03382e+07 0.0350834 8.62446e+06 9.07994e+07 5.44743e+06 23374 4.50065e+07 0 0.14382 0.994921 0.816732 9.03382e+07 0.00290112 1.95021e+07 2.50909e+07 2.01842e+07 342 1.99184e+07 7.15089e+06 0.00268423 1.98462e+07 49.9092 0.0949837 0.996007 0 50.8594 GTEX-11WQC-0011-R2a-SM-DO927 B1, A1 6 Brain Brain - Substantia nigra 0002038 608 BP-43067 RNA isolation_PAXgene Tissue miRNA 09/04/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.99461 473614 0.96852 0.995573 0.843958 21980 1 76 0.00236372 207 0 7.3317e+07 0.0312955 6.97327e+06 7.36431e+07 4.2591e+06 21992 3.65338e+07 0 0.124562 0.995573 0.840222 7.3317e+07 0.0028688 1.59441e+07 1.73727e+07 1.64809e+07 253 1.62204e+07 6.55561e+06 0.00261602 1.62573e+07 50.0568 0.0946901 0.996536 0 50.8278 GTEX-11WQC-0011-R3a-SM-DO11T B1, A1 6.6 Brain Brain - Anterior cingulate cortex (BA24) 0009835 608 BP-43067 RNA isolation_PAXgene Tissue miRNA 09/04/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.986631 277046 0.972533 0.991385 0.865517 20970 1 76 0.00286931 146 0 5.68991e+07 0.0272776 5.59543e+06 5.73935e+07 5.49436e+06 20981 2.82471e+07 0 0.107016 0.991385 0.858061 5.68991e+07 0.00552453 1.23682e+07 1.33464e+07 1.27924e+07 178 1.27062e+07 3.96493e+06 0.00419055 1.26717e+07 49.9319 0.0974924 0.996139 0 50.8428 GTEX-11WQC-0011-R5a-SM-5BC74 B1, A1 8.1 Brain Brain - Caudate (basal ganglia) 0001873 608 BP-43229 RNA isolation_PAXgene Tissue miRNA 09/06/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.987182 494880 0.967687 0.991637 0.843273 22534 1 76 0.00322685 196 0 7.2934e+07 0.032113 6.36715e+06 7.3549e+07 1.96349e+07 22545 3.62023e+07 0 0.124414 0.991637 0.836221 7.2934e+07 0.00569099 1.59631e+07 2.74616e+07 1.5857e+07 242 1.55967e+07 5.44385e+06 0.00445339 1.65165e+07 51.4322 0.0865701 0.996093 0 49.8331 GTEX-11WQC-0011-R6a-SM-5BC77 B1, A1 8.1 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 608 BP-43229 RNA isolation_PAXgene Tissue miRNA 09/06/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.986226 494173 0.966134 0.989922 0.835927 21901 1 76 0.00329471 196 0 6.99949e+07 0.0337067 6.56967e+06 7.07075e+07 1.73098e+07 21906 3.47878e+07 0 0.130207 0.989922 0.827502 6.99949e+07 0.00553408 1.52322e+07 3.21347e+07 1.51103e+07 238 1.48806e+07 4.82387e+06 0.00441021 1.56855e+07 51.3167 0.0929134 0.993619 0 49.7992 GTEX-11WQC-0011-R7b-SM-5BC7A B1, A1 7 Brain Brain - Putamen (basal ganglia) 0001874 608 BP-43229 RNA isolation_PAXgene Tissue miRNA 09/06/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.985949 401045 0.972086 0.990546 0.842308 21027 1 76 0.00340388 194 0 6.85693e+07 0.0277958 6.8716e+06 6.92237e+07 1.78986e+07 21036 3.40466e+07 0 0.129778 0.990546 0.834345 6.85693e+07 0.00600233 1.50175e+07 3.29549e+07 1.47912e+07 225 1.46032e+07 3.81767e+06 0.00469708 1.54742e+07 51.4479 0.0992665 0.995143 0 49.6204 GTEX-11WQC-0011-R8b-SM-57WCH B1, A1 7.5 Brain Brain - Hypothalamus 0001898 608 BP-43316 RNA isolation_PAXgene Tissue miRNA 09/09/2013 LCSET-4415 12/21/2013 TruSeq.v1 RNASEQ 0.989161 598783 0.956036 0.992381 0.828386 23354 1 76 0.00239322 153 0 6.55375e+07 0.0437683 3.83127e+06 6.60407e+07 8.50786e+06 23369 3.25786e+07 0 0.12765 0.992381 0.822075 6.55375e+07 0.00420134 1.43102e+07 1.7746e+07 1.43287e+07 200 1.42099e+07 5.76882e+06 0.00329434 1.46233e+07 50.7169 0.0580138 0.995601 0 50.0323 GTEX-11WQC-0626-SM-5EQMF 1 B1 2 pieces, mild fibrosis, some hemosiderin-laden macrophages 6.5 Lung Lung 0008952 693 665 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.990297 197650 0.969445 0.992284 0.688112 23028 1 76 0.00255658 123 0 6.73992e+07 0.0301906 317599 6.79234e+07 7.32685e+06 23061 3.35226e+07 0 0.281333 0.992284 0.682802 6.73992e+07 0.00356155 1.48404e+07 6.46255e+06 1.4938e+07 141 1.49377e+07 8.8159e+06 0.00305806 1.49691e+07 50.0524 0.00467584 0.99427 0 50.1638 GTEX-11WQC-0626-SM-CYKQZ 1 B1 2 pieces, mild fibrosis, some hemosiderin-laden macrophages 6.5 Lung Lung 0008952 693 665 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 RIP-Seq GTEX-11WQC-0726-SM-5EQMR 1 B1 2 pieces, congested, includes capsule (target is 1 cm below capsule), chronic inflammation 6.6 Liver Liver 0001114 696 662 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.99175 294116 0.970174 0.993901 0.807268 21695 1 76 0.00243669 154 0 7.46922e+07 0.0296162 1.29897e+06 7.51506e+07 1.01409e+07 21720 3.71817e+07 0 0.162907 0.993901 0.802344 7.46922e+07 0.00345072 1.61354e+07 1.3233e+07 1.61576e+07 197 1.61256e+07 1.01751e+07 0.00294261 1.63144e+07 50.291 0.0172849 0.996051 0 50.0343 GTEX-11WQC-1726-SM-5GU4W 1 B1 2 pieces, 50-75% fibrous tissue and ducts with gynecomastoid change 6 Breast Breast - Mammary Tissue 0008367 728 630 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.988756 233791 0.975754 0.991122 0.811355 23852 1 76 0.00210982 156 0 7.15022e+07 0.023756 180189 7.21427e+07 4.50656e+06 23877 3.55439e+07 0 0.1644 0.991122 0.804151 7.15022e+07 0.00299862 1.57038e+07 6.78336e+06 1.58603e+07 163 1.58329e+07 1.41476e+07 0.00255316 1.59012e+07 50.1076 0.00249767 0.993487 0 50.2478 GTEX-11WQC-1826-SM-5GU59 1 B1 6 pieces, well trimmed 7.3 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 732 626 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.989584 242216 0.978043 0.992197 0.829563 22072 1 76 0.0022081 159 0 6.34361e+07 0.0216043 231892 6.3935e+07 4.18186e+06 22092 3.15211e+07 0 0.148479 0.992197 0.823091 6.34361e+07 0.00331247 1.38397e+07 6.98308e+06 1.39536e+07 149 1.3936e+07 1.2375e+07 0.00275883 1.40212e+07 50.1523 0.003627 0.994811 0 50.2049 GTEX-11WQC-2326-SM-5EQKE 1 B1 2 pieces, spermatogenesis present, increased peritubular fibrosis 6.1 Testis Testis 0000473 750 608 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.989435 280638 0.919925 0.991627 0.728613 33221 1 76 0.00224021 184 0 8.3981e+07 0.0796503 605791 8.469e+07 1.21106e+07 33281 4.18089e+07 0 0.191312 0.991627 0.722513 8.3981e+07 0.00308538 1.70565e+07 1.34373e+07 1.71576e+07 171 1.72011e+07 1.47932e+07 0.00266186 1.71808e+07 49.9705 0.00715304 0.99382 0 50.1477 GTEX-11WQC-2426-SM-5EQKQ 1 B1 2 pieces 5.8 Adipose Tissue Adipose - Subcutaneous 0002190 817 541 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.988899 194488 0.973787 0.990921 0.766484 22716 1 76 0.00251607 142 0 6.88405e+07 0.0258685 706233 6.94713e+07 8.28179e+06 22745 3.42483e+07 0 0.207304 0.990921 0.759525 6.88405e+07 0.00368514 1.51885e+07 7.50565e+06 1.51767e+07 161 1.51565e+07 9.96751e+06 0.00309941 1.5345e+07 50.3089 0.0101658 0.992943 0 49.9805 GTEX-11WQC-2526-SM-5CVLE 1 B1 6 pieces, fairly well trimmed, squamous epithelium measures 20-30 microns thick 6.8 Skin Skin - Sun Exposed (Lower leg) 0004264 818 540 BP-44525 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.986474 197254 0.974966 0.990214 0.797797 23800 1 76 0.00502904 150 0 6.65411e+07 0.0247312 324895 6.71987e+07 1.24298e+07 23826 3.30226e+07 0 0.17717 0.990214 0.78999 6.65411e+07 0.00715432 1.45046e+07 7.48359e+06 1.45955e+07 133 1.46495e+07 1.19873e+07 0.00608766 1.46868e+07 50.0636 0.00483484 0.993955 0 50.1562 GTEX-11WQC-2626-SM-5CVLF 1 B1 2 pieces, ~10% internal fat, one piece includes portion of tendon 7 Muscle Muscle - Skeletal 0011907 819 539 BP-44525 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.989037 216832 0.980839 0.992233 0.863733 21711 1 76 0.00481604 131 0 7.95892e+07 0.0189556 1.07382e+06 8.02122e+07 1.42958e+07 21721 3.95454e+07 0 0.117105 0.992233 0.857024 7.95892e+07 0.0068245 1.73344e+07 7.62239e+06 1.73631e+07 155 1.7415e+07 1.74128e+07 0.00581703 1.75146e+07 50.1426 0.0133872 0.995428 0 50.0414 GTEX-11WQC-2726-SM-5CVLG 1 B1 2 pieces, well trimmed 5.9 Blood Vessel Artery - Tibial 0007610 821 537 BP-44525 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.987274 170436 0.973649 0.990657 0.816323 21814 1 76 0.00482985 137 0 7.03494e+07 0.0259427 232627 7.10128e+07 1.17742e+07 21831 3.4897e+07 0 0.157326 0.990657 0.808696 7.03494e+07 0.00687677 1.50211e+07 5.7036e+06 1.51251e+07 144 1.51382e+07 1.31936e+07 0.00584982 1.52347e+07 50.159 0.00327584 0.994041 0 50.1724 GTEX-11WQC-2826-SM-5GU7A 1 B1 2 pieces, well trimmed 6.6 Nerve Nerve - Tibial 0001323 824 534 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4803,LCSET-5132 03/08/2014 TruSeq.v1 RNASEQ 0.990671 436444 0.971314 0.992806 0.743982 24194 1 76 0.00240791 168 0 8.20832e+07 0.0283589 108599 8.2678e+07 5.31027e+06 24235 4.07975e+07 0 0.227332 0.992806 0.738629 8.20832e+07 0.00344385 1.80437e+07 6.9756e+06 1.81916e+07 179 1.81526e+07 1.32194e+07 0.00292477 1.82539e+07 50.1391 0.00131352 0.994941 0 50.204 GTEX-11WQK-0003-SM-58Q8U B1 Blood Whole Blood 0013756 474 BP-40386 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/03/2013 LCSET-4574 01/20/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-11WQK-0003-SM-5DWTN B1 Blood Whole Blood 0013756 474 BP-40386 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/03/2013 GTEx_OM25_Dec_01 01/28/2014 Illumina OMNI SNP Array OMNI GTEX-11WQK-0003-SM-6WBUB B1 Blood Whole Blood 0013756 474 BP-40386 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/03/2013 LCSET-6056 09/21/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-11WQK-0005-SM-5O9AV B1 7.3 Blood Whole Blood 0013756 474 BP-40354 RNA isolation_PAXgene Blood RNA (Manual) 07/02/2013 LCSET-4909 03/20/2014 TruSeq.v1 RNASEQ 0.971785 1.28478e+06 0.943033 0.975738 0.713537 22346 1 76 0.00233799 140 0 1.05479e+08 0.0559118 113422 1.08101e+08 1.53661e+07 22381 5.23042e+07 0 0.229496 0.975738 0.696225 1.05479e+08 0.00439422 2.31013e+07 1.32186e+08 2.35212e+07 162 2.3544e+07 2.19516e+07 0.00336194 2.35485e+07 50.0048 0.00104922 0.97969 0 50.4504 GTEX-11WQK-0008-SM-5SI6T B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 731 BP-45532 RNA isolation_Trizol Manual (Cell Pellet) 11/06/2013 LCSET-4995 04/05/2014 TruSeq.v1 RNASEQ 0.992767 357425 0.976338 0.994864 0.868344 20533 1 76 0.00166127 211 0 8.11914e+07 0.023381 427972 8.16105e+07 7.50608e+06 20547 4.04403e+07 0 0.107993 0.994864 0.863885 8.11914e+07 0.00258347 1.80319e+07 1.19997e+07 1.81698e+07 218 1.81646e+07 1.92071e+07 0.0021214 1.82051e+07 50.0557 0.00524408 0.996961 0 50.1905 GTEX-11WQK-0011-R10a-SM-5BC6R B1, A1 7.3 Brain Brain - Frontal Cortex (BA9) 0009834 524 BP-43229 RNA isolation_PAXgene Tissue miRNA 09/06/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.985631 373199 0.968486 0.991108 0.867629 22264 1 76 0.00258278 149 0 5.78234e+07 0.0312385 5.35246e+06 5.83421e+07 1.43513e+07 22272 2.86781e+07 0 0.100857 0.991108 0.859915 5.78234e+07 0.00534721 1.29305e+07 1.39354e+07 1.26702e+07 181 1.26154e+07 5.82828e+06 0.00395736 1.32757e+07 51.2751 0.0917426 0.996586 0 49.4918 GTEX-11WQK-0011-R10a-SM-AHZ6L B1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 524 ChIP-Seq GTEX-11WQK-0011-R10a-SM-CYKOX B1, A1 7.3 Brain Brain - Frontal Cortex (BA9) 0009834 524 BP-43229 RNA isolation_PAXgene Tissue miRNA 09/06/2013 RIP-Seq GTEX-11WQK-0011-R11a-SM-5BC6W B1, A1 7.9 Brain Brain - Cerebellar Hemisphere 0002037 524 BP-43229 RNA isolation_PAXgene Tissue miRNA 09/06/2013 LCSET-4455 01/18/2014 TruSeq.v1 EXCLUDE 0.987128 499744 0.939439 0.990838 0.754381 23888 1 76 0.00284006 159 0 6.79231e+07 0.0602456 2.73782e+06 6.85511e+07 1.45668e+07 23910 3.37251e+07 0 0.185058 0.990838 0.747469 6.79231e+07 0.00487753 1.47078e+07 2.35571e+07 1.47576e+07 176 1.4801e+07 6.5751e+06 0.00385498 1.49027e+07 50.1712 0.0399384 0.994549 0 50.0844 GTEX-11WQK-0011-R3b-SM-DO93K B1, A1 6.1 Brain Brain - Anterior cingulate cortex (BA24) 0009835 524 BP-43067 RNA isolation_PAXgene Tissue miRNA 09/04/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.993835 545535 0.966057 0.994877 0.851709 23179 1 76 0.00183785 371 0 8.33936e+07 0.0336967 1.02137e+07 8.3823e+07 4.33346e+06 23192 4.15563e+07 0 0.114348 0.994877 0.847346 8.33936e+07 0.0024492 1.83437e+07 1.98107e+07 1.8654e+07 354 1.85092e+07 7.47148e+06 0.00214321 1.85593e+07 50.0675 0.121849 0.99592 0 50.4192 GTEX-11WQK-0011-R8a-SM-5BC7C B1, A1 6.4 Brain Brain - Hypothalamus 0001898 524 BP-43229 RNA isolation_PAXgene Tissue miRNA 09/06/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.985234 383742 0.965571 0.990343 0.855431 21383 1 76 0.00273678 185 0 6.04669e+07 0.0343234 6.44029e+06 6.10565e+07 1.56217e+07 21389 2.99972e+07 0 0.11014 0.990343 0.84717 6.04669e+07 0.00555617 1.35404e+07 2.06499e+07 1.31127e+07 217 1.29977e+07 3.15682e+06 0.00413921 1.39213e+07 51.7154 0.105481 0.995452 0 49.1976 GTEX-11WQK-0011-R9b-SM-5BC6N B1, A1 7.6 Brain Brain - Spinal cord (cervical c-1) 0006469 524 BP-43229 RNA isolation_PAXgene Tissue miRNA 09/06/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.985913 684814 0.949268 0.991029 0.832403 21269 1 76 0.002833 202 0 6.75289e+07 0.0504867 5.17526e+06 6.81402e+07 1.84454e+07 21280 3.34938e+07 0 0.116865 0.991029 0.824935 6.75289e+07 0.00531083 1.46801e+07 2.25885e+07 1.50489e+07 205 1.47899e+07 6.93028e+06 0.00406552 1.52644e+07 50.7894 0.0759501 0.996146 0 50.6202 GTEX-11WQK-0226-SM-5EQLI 1 B1 2 pieces, focal adherent fat, ~0.5 mm, delineated 6.7 Heart Heart - Atrial Appendage 0006631 631 1045 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.990347 221432 0.97605 0.992459 0.7904 21504 1 76 0.00200828 154 0 7.60237e+07 0.0237655 1.26026e+06 7.66013e+07 1.03568e+07 21522 3.78528e+07 0 0.185651 0.992459 0.784439 7.60237e+07 0.00302512 1.63925e+07 7.20075e+06 1.64219e+07 195 1.64214e+07 1.14492e+07 0.00251562 1.65434e+07 50.1851 0.0164522 0.994572 0 50.0448 GTEX-11WQK-0326-SM-5EQL1 1 B1 6 pieces, adherenet serosa on several up to ~0.4mm, rep delineated. Minimal atherosis, <0.1mm 7.3 Blood Vessel Artery - Aorta 0001496 642 1034 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.984814 1.48134e+06 0.905033 0.987588 0.673714 22017 1 76 0.00225661 133 0 7.72857e+07 0.0945386 303939 7.8257e+07 1.09248e+07 22046 3.84128e+07 0 0.231318 0.987588 0.665352 7.72857e+07 0.00354241 1.55679e+07 6.81572e+07 1.59463e+07 144 1.59684e+07 1.23588e+07 0.0028977 1.57861e+07 49.7131 0.00388386 0.990363 0 50.6004 GTEX-11WQK-0526-SM-5EQLD 0 B1 6 pieces, minimal fat, squamous epitheliums is ~40 microns 7.8 Skin Skin - Sun Exposed (Lower leg) 0004264 731 945 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.98946 263451 0.977402 0.992309 0.760723 23552 1 76 0.00213233 221 0 8.939e+07 0.0224103 1.19417e+06 9.00828e+07 1.28408e+07 23585 4.4463e+07 0 0.216679 0.992309 0.754872 8.939e+07 0.00317364 1.98064e+07 1.0135e+07 1.99065e+07 209 1.99571e+07 1.60111e+07 0.00265149 2.00056e+07 50.0607 0.0132564 0.995159 0 50.1261 GTEX-11WQK-0726-SM-5GU71 0 B1 2 pieces, ~10-15% interstitial fat, delineated (rep) 8.3 Muscle Muscle - Skeletal 0011907 738 938 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.99224 208624 0.98101 0.994539 0.862051 17871 1 76 0.00163647 112 0 5.22668e+07 0.0187801 740414 5.25538e+07 3.4478e+06 17878 2.60211e+07 0 0.118959 0.994539 0.857343 5.22668e+07 0.00239055 1.13364e+07 5.12224e+06 1.1444e+07 123 1.14354e+07 1.12905e+07 0.00201264 1.14558e+07 50.0446 0.0140887 0.996837 0 50.2361 GTEX-11WQK-0726-SM-CYKV6 0 B1 2 pieces, ~10-15% interstitial fat, delineated (rep) 8.3 Muscle Muscle - Skeletal 0011907 738 938 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 RIP-Seq GTEX-11WQK-1026-SM-5EQLX 0 B1 6 pieces, minimal fat, squamous epitheliums is ~50 microns 7.7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 762 914 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.989113 421835 0.977028 0.992057 0.745518 23121 1 76 0.00215453 149 0 7.60187e+07 0.0227963 729838 7.66274e+07 9.77947e+06 23150 3.78022e+07 0 0.23151 0.992057 0.739596 7.60187e+07 0.00329845 1.69218e+07 8.54106e+06 1.70737e+07 158 1.71152e+07 1.3437e+07 0.00272479 1.70981e+07 49.9751 0.0095245 0.995001 0 50.2233 GTEX-11WQK-1226-SM-5GU5Z 2 B1 2 pieces, mild congestion 7.5 Lung Lung 0008952 776 900 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4803,LCSET-5131 03/08/2014 TruSeq.v1 RNASEQ 0.987602 477848 0.979083 0.991057 0.727006 23557 1 76 0.00260001 209 0 1.00469e+08 0.0205096 527534 1.01376e+08 5.69185e+06 23594 4.98608e+07 0 0.252077 0.991057 0.720504 1.00469e+08 0.00353102 2.22729e+07 1.00566e+07 2.24525e+07 231 2.24392e+07 1.51694e+07 0.00306389 2.26197e+07 50.2003 0.00520374 0.994513 0 50.2008 GTEX-11WQK-1226-SM-CYKV5 2 B1 2 pieces, mild congestion 7.5 Lung Lung 0008952 776 900 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 RIP-Seq GTEX-11WQK-1526-SM-5EGKN 1 B1 2 pieces, minimal fibrous/vascular tissue, good specimens 7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 782 894 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.987964 315110 0.976204 0.991354 0.780479 22442 1 76 0.00193352 154 0 7.3148e+07 0.0235706 701236 7.3786e+07 6.31894e+06 22460 3.63278e+07 0 0.195724 0.991354 0.773731 7.3148e+07 0.00313883 1.59504e+07 8.45046e+06 1.61166e+07 171 1.61355e+07 1.21784e+07 0.00253412 1.61698e+07 50.0529 0.00950365 0.994744 0 50.2592 GTEX-11WQK-1826-SM-5EQM2 1 B1 4 pieces 6 Esophagus Esophagus - Muscularis 0004648 787 889 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.991002 174796 0.974138 0.993075 0.807828 21768 1 76 0.00200807 195 0 7.38174e+07 0.0257031 2.06138e+06 7.43322e+07 9.05741e+06 21789 3.6748e+07 0 0.16631 0.993075 0.802233 7.38174e+07 0.00319637 1.62565e+07 7.41956e+06 1.62974e+07 204 1.62416e+07 9.96583e+06 0.00260098 1.64594e+07 50.333 0.027732 0.995147 0 50.0629 GTEX-11WQK-2126-SM-5EQME 2 B1 6 pieces, all muscularis, switch with 2525 6.3 Colon Colon - Transverse 0001157 801 875 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4790 02/19/2014 TruSeq.v1 EXCLUDE 0.989392 240346 0.970759 0.992174 0.780168 22942 1 76 0.00209941 162 0 7.86264e+07 0.0290225 1.10563e+06 7.92466e+07 1.15456e+07 22969 3.91037e+07 0 0.190591 0.992174 0.774062 7.86264e+07 0.00316223 1.70729e+07 7.74001e+06 1.72309e+07 189 1.72424e+07 1.24285e+07 0.00262933 1.7272e+07 50.0428 0.0139517 0.994955 0 50.2304 GTEX-11WQK-2226-SM-5CVL7 1 B1 6 pieces, all muscularis, good specimens 5.9 Esophagus Esophagus - Gastroesophageal Junction 0004550 803 873 BP-44525 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.983551 283560 0.96965 0.987172 0.785739 23003 1 76 0.00482719 151 0 7.69184e+07 0.0301795 1.65970e+06 7.79179e+07 1.36302e+07 23026 3.81588e+07 0 0.183911 0.987172 0.77566 7.69184e+07 0.0069761 1.67808e+07 9.01201e+06 1.68725e+07 173 1.6859e+07 1.03904e+07 0.0058977 1.70616e+07 50.2986 0.0213007 0.990794 0 50.1362 GTEX-11WQK-2326-SM-5GU4Z 3 B1 6 pieces, marked autolysia; lymphoid component is ~20% total 6.3 Small Intestine Small Intestine - Terminal Ileum 0001211 806 870 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4803 02/19/2014 TruSeq.v1 EXCLUDE 0.989809 314822 0.97381 0.992325 0.762936 22507 1 76 0.00198294 158 0 7.62304e+07 0.0259721 683638 7.682e+07 5.31788e+06 22527 3.79218e+07 0 0.210874 0.992325 0.757081 7.62304e+07 0.0028228 1.66788e+07 7.51941e+06 1.68792e+07 172 1.68889e+07 1.26069e+07 0.00240181 1.68541e+07 49.9484 0.00889922 0.994841 0 50.2985 GTEX-11WQK-2426-SM-5GU5C 1 B1 2 pieces, adipose tissue; no ductal elements 6 Breast Breast - Mammary Tissue 0008367 807 869 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.985885 284822 0.977506 0.989179 0.790259 21656 1 76 0.00197484 150 0 7.12187e+07 0.0222574 622427 7.19978e+07 4.95448e+06 21675 3.53692e+07 0 0.187248 0.989179 0.781707 7.12187e+07 0.00290946 1.55345e+07 6.49891e+06 1.56936e+07 170 1.56753e+07 1.19525e+07 0.0024406 1.57798e+07 50.1661 0.00864509 0.992474 0 50.2547 GTEX-11WQK-2526-SM-5CVL8 3 B1 6 pieces, mucsoa competely autlyzyed; switch with 2125 6.2 Colon Colon - Sigmoid 0001159 810 866 BP-44525 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4633 02/15/2014 TruSeq.v1 EXCLUDE 0.983655 212939 0.973446 0.988371 0.789719 22428 1 76 0.0048101 114 0 6.16853e+07 0.0263211 567133 6.24111e+07 1.18912e+07 22448 3.05785e+07 0 0.183727 0.988371 0.780535 6.16853e+07 0.00714676 1.34271e+07 5.77839e+06 1.35314e+07 128 1.36004e+07 9.93074e+06 0.00597285 1.36352e+07 50.0639 0.00908705 0.993087 0 50.1934 GTEX-11WQK-2626-SM-5EQ4K 3 B1 6 pieces, mucosa largely sloughed/autolyzed; one surviving focus (delineated) is markedly autolyzed 7.1 Stomach Stomach 0000945 813 863 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.989114 263419 0.975198 0.992261 0.785857 21742 1 76 0.00202225 133 0 6.51643e+07 0.0245551 314497 6.56726e+07 8.24209e+06 21762 3.23754e+07 0 0.189341 0.992261 0.779775 6.51643e+07 0.00313777 1.42524e+07 6.48794e+06 1.44174e+07 148 1.44268e+07 1.15453e+07 0.00257824 1.44429e+07 50.0279 0.00478886 0.995408 0 50.2877 GTEX-11WQK-2726-SM-5EQMU 2 B1 2 pieces, glandular component moderate-marked autolysis (2-3) 5.9 Prostate Prostate 0002367 814 862 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.988443 242855 0.967145 0.990708 0.745541 23106 1 76 0.00217091 144 0 6.70684e+07 0.0326807 1.50183e+06 6.76975e+07 8.65394e+06 23136 3.33537e+07 0 0.221604 0.990708 0.738614 6.70684e+07 0.00342976 1.48121e+07 8.49751e+06 1.48284e+07 166 1.4782e+07 7.99615e+06 0.0027989 1.5006e+07 50.3761 0.0221844 0.992973 0 50.0275 GTEX-11WQK-2826-SM-5EQKH 2 B1 2 pieces; spermatogenesis present but appears redueced 6.8 Testis Testis 0000473 816 860 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.989508 327584 0.942283 0.991538 0.702911 32340 1 76 0.00223867 164 0 8.22887e+07 0.0574383 1.23225e+06 8.2991e+07 1.00727e+07 32404 4.09585e+07 0 0.239373 0.991538 0.696963 8.22887e+07 0.00311656 1.75686e+07 1.20361e+07 1.75767e+07 185 1.7589e+07 1.13693e+07 0.00267672 1.77127e+07 50.1752 0.014848 0.993568 0 50.0115 GTEX-11WQK-2926-SM-5EQKT 1 B1 2 pieces, excellent specimens; glandular parenchmyma is ~80% total tisssue 8.7 Salivary Gland Minor Salivary Gland 0006330 817 859 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.987968 269204 0.977495 0.990138 0.796871 22479 1 76 0.0022395 228 0 8.17856e+07 0.0216921 492545 8.26001e+07 9.86848e+06 22505 4.06928e+07 0 0.180623 0.990138 0.789013 8.17856e+07 0.00324884 1.86916e+07 2.17577e+07 1.86751e+07 219 1.86995e+07 1.46798e+07 0.00274307 1.88416e+07 50.1892 0.005963 0.992309 0 49.978 GTEX-11WQK-3026-SM-5EQL6 1 B1 2 pieces, no abnormalities 6.6 Brain Brain - Cortex 0001870 860 816 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.990126 266686 0.966023 0.993254 0.822936 24511 1 76 0.00205653 200 0 6.99339e+07 0.0337215 4.06509e+06 7.04089e+07 9.04385e+06 24527 3.47683e+07 0 0.143087 0.993254 0.817384 6.99339e+07 0.00356006 1.56012e+07 1.06096e+07 1.53941e+07 220 1.5289e+07 7.31354e+06 0.00280593 1.59133e+07 51.0004 0.0577355 0.996381 0 49.6658 GTEX-11WQK-3126-SM-5EGI2 1 B1 2 pieces, no abnormalities; Purkinje cells well visualized, rep delineated 6.1 Brain Brain - Cerebellum 0002037 861 815 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4764 02/09/2014 TruSeq.v1 EXCLUDE 0.982259 375452 0.928638 0.987494 0.733759 24061 1 76 0.00254878 129 0 6.17968e+07 0.0711612 2.85656e+06 6.25794e+07 9.31029e+06 24082 3.06458e+07 0 0.194879 0.987494 0.724583 6.17968e+07 0.00612997 1.31634e+07 2.20645e+07 1.324e+07 155 1.32886e+07 5.26693e+06 0.00432988 1.34067e+07 50.2212 0.0456469 0.992729 0 50.145 GTEX-11WQK-3226-SM-5EGI3 1 B1 1 piece, adenohypophysis, 20% dura, delineated 6.9 Pituitary Pituitary 0000007 862 814 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.984961 226810 0.954985 0.989033 0.74975 23553 1 76 0.00238653 112 0 5.64644e+07 0.0448248 425458 5.70905e+07 8.48115e+06 23580 2.80488e+07 0 0.205235 0.989033 0.741528 5.64644e+07 0.0052998 1.20125e+07 9.88102e+06 1.21251e+07 126 1.21826e+07 7.86821e+06 0.00383717 1.21684e+07 49.9709 0.00745234 0.993106 0 50.2333 GTEX-11XUK-0003-SM-58Q8M B1 Blood Whole Blood 0013756 -54 BP-40386 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/03/2013 LCSET-4574 01/20/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-11XUK-0003-SM-5DWTF B1 Blood Whole Blood 0013756 -54 BP-40386 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/03/2013 GTEx_OM25_Dec_01 01/29/2014 Illumina OMNI SNP Array OMNI GTEX-11XUK-0003-SM-6WBU7 B1 Blood Whole Blood 0013756 -54 BP-40386 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/03/2013 LCSET-6056 09/22/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-11XUK-0005-SM-5LU9F B1 9.4 Blood Whole Blood 0013756 -54 BP-40354 RNA isolation_PAXgene Blood RNA (Manual) 07/02/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.989508 508759 0.96798 0.991446 0.807148 19449 1 76 0.004461 109 0 6.83933e+07 0.0316796 194901 6.89834e+07 6.30102e+06 19455 3.4021e+07 0 0.160832 0.991446 0.800243 6.83933e+07 0.0037196 1.52369e+07 4.01635e+07 1.53183e+07 124 1.53528e+07 1.50617e+07 0.00409103 1.53431e+07 49.9841 0.00282533 0.993384 0 50.1331 GTEX-11XUK-0008-SM-5S2WD B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 333 BP-45532 RNA isolation_Trizol Manual (Cell Pellet) 11/06/2013 LCSET-4996 04/03/2014 TruSeq.v1 RNASEQ 0.994342 354086 0.97751 0.995682 0.864397 19964 1 76 0.00162664 170 0 7.8949e+07 0.022197 388773 7.92914e+07 7.45230e+06 19971 3.93539e+07 0 0.113113 0.995682 0.860665 7.8949e+07 0.00240516 1.76191e+07 1.08919e+07 1.7742e+07 184 1.77194e+07 1.92461e+07 0.00201538 1.77516e+07 50.0454 0.00490309 0.997022 0 50.1737 GTEX-11XUK-0126-SM-5CVLK 1 B1 2 pieces; one 60% fat, other 20% 6.6 Adrenal Gland Adrenal Gland 0002369 100 1341 BP-44525 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.986931 211716 0.977522 0.991062 0.83643 22255 1 76 0.0048297 130 0 6.6517e+07 0.0221886 1.58357e+06 6.71168e+07 1.28347e+07 22268 3.30144e+07 0 0.141092 0.991062 0.828954 6.6517e+07 0.00691987 1.46913e+07 9.87664e+06 1.46635e+07 146 1.46576e+07 1.07596e+07 0.00587043 1.49375e+07 50.4728 0.0235943 0.995194 0 49.9525 GTEX-11XUK-0226-SM-5EQLW 0 B1 2 pieces; moderate degree of Hashimoto (lymphocytic) thyroiditis 8.3 Thyroid Thyroid 0002046 101 1340 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.98929 266634 0.961318 0.991374 0.714131 25322 1 76 0.00281163 136 0 7.67461e+07 0.0362909 347870 7.74139e+07 9.76066e+06 25373 3.8118e+07 0 0.247188 0.991374 0.707971 7.67461e+07 0.00375563 1.68962e+07 1.30193e+07 1.69526e+07 160 1.69878e+07 1.08693e+07 0.00328264 1.70142e+07 50.0388 0.00449364 0.993459 0 50.0834 GTEX-11XUK-0426-SM-5EQML 1 B1 2 pieces; numerous blood vessels focally (annotated) 6 Spleen Spleen 0002106 104 1337 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.989499 400606 0.965638 0.992257 0.799558 23165 1 76 0.00231961 144 0 6.48287e+07 0.0336289 324500 6.53346e+07 8.11556e+06 23189 3.22107e+07 0 0.16608 0.992257 0.793367 6.48287e+07 0.00363746 1.42511e+07 8.04597e+06 1.42973e+07 159 1.42787e+07 1.01697e+07 0.0029767 1.4446e+07 50.2912 0.00496674 0.995015 0 50.0808 GTEX-11XUK-0626-SM-5N9ES 1 B1 2 pieces; one large duct with PanIN !a 5.7 Pancreas Pancreas 0001150 112 1329 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.988596 373712 0.977381 0.990384 0.856114 22305 1 76 0.00404786 160 0 1.05567e+08 0.022177 640013 1.06592e+08 5.44315e+06 22327 5.24847e+07 0 0.121267 0.990384 0.847881 1.05567e+08 0.00418525 2.41371e+07 2.81999e+07 2.46183e+07 189 2.45563e+07 2.83251e+07 0.00411643 2.43856e+07 49.8256 0.00600431 0.992171 0 50.4935 GTEX-11XUK-0726-SM-5EQMX 0 B1 6 pieces; well trimmed muscle 8.2 Esophagus Esophagus - Muscularis 0004648 128 1313 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.992544 260597 0.977047 0.994216 0.836285 21191 1 76 0.00196189 174 0 7.17e+07 0.0226529 1.07164e+06 7.21171e+07 8.72545e+06 21209 3.5715e+07 0 0.140763 0.994216 0.831447 7.17e+07 0.00287333 1.56255e+07 8.24901e+06 1.56604e+07 184 1.56074e+07 1.23805e+07 0.00241685 1.57965e+07 50.3011 0.0148598 0.995887 0 50.0557 GTEX-11XUK-0826-SM-5GU6P 0 B1 6 pieces; prominent submucosal glands (1 mm) [annotated] 8.4 Esophagus Esophagus - Mucosa 0006920 135 1306 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.98987 240930 0.976466 0.992771 0.824722 22631 1 76 0.00193989 140 0 6.15516e+07 0.023183 401192 6.19998e+07 4.05277e+06 22646 3.0618e+07 0 0.151744 0.992771 0.81876 6.15516e+07 0.00272876 1.37896e+07 7.04798e+06 1.38884e+07 144 1.391e+07 1.2116e+07 0.00233317 1.39388e+07 50.0516 0.00647086 0.995672 0 50.1786 GTEX-11XUK-0926-SM-5EQL3 0 B1 6 pieces; well trimmed muscularis 7.8 Esophagus Esophagus - Gastroesophageal Junction 0004550 140 1301 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.992098 156380 0.97868 0.994074 0.848439 21440 1 76 0.00194495 144 0 6.3178e+07 0.0210111 810813 6.35546e+07 8.85725e+06 21455 3.14657e+07 0 0.130241 0.994074 0.843411 6.3178e+07 0.00285734 1.37832e+07 5.96719e+06 1.3823e+07 157 1.37978e+07 1.13653e+07 0.00240024 1.39288e+07 50.2362 0.0127577 0.996049 0 50.0721 GTEX-11XUK-1326-SM-5EQM4 0 B1 6 pieces 8.6 Vagina Vagina 0000996 163 1278 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.991806 192622 0.97681 0.993313 0.798829 22367 1 76 0.0021311 140 0 6.96411e+07 0.0229188 297203 7.011e+07 8.87034e+06 22390 3.47014e+07 0 0.177981 0.993313 0.793487 6.96411e+07 0.00297508 1.56702e+07 1.03507e+07 1.57162e+07 161 1.57167e+07 1.26527e+07 0.00255245 1.57718e+07 50.0874 0.0042391 0.994821 0 50.0732 GTEX-11XUK-1426-SM-5EQMG 1 B1 6 pieces; muscularis in 5 of 6; 3 small lymphoid nodules 7.7 Small Intestine Small Intestine - Terminal Ileum 0001211 164 1277 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.989645 247478 0.965684 0.992071 0.75648 24621 1 76 0.00230063 163 0 7.41419e+07 0.033808 497839 7.47344e+07 1.0626e+07 24651 3.68902e+07 0 0.209203 0.992071 0.750482 7.41419e+07 0.00333708 1.63275e+07 8.77596e+06 1.63977e+07 168 1.64052e+07 1.15666e+07 0.00281759 1.64892e+07 50.1277 0.00666144 0.994498 0 50.1072 GTEX-11XUK-1626-SM-5GU5O 0 B1 2 pieces; corpora albicans; inactive 7.6 Ovary Ovary 0000992 167 1274 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.990507 342643 0.975445 0.993253 0.763736 22513 1 76 0.001796 147 0 7.27602e+07 0.0242245 140848 7.32544e+07 4.82805e+06 22549 3.61942e+07 0 0.211709 0.993253 0.758583 7.27602e+07 0.00253446 1.61261e+07 7.28087e+06 1.6278e+07 159 1.63226e+07 1.33883e+07 0.00216421 1.62759e+07 49.9285 0.00192272 0.995999 0 50.2343 GTEX-11XUK-1726-SM-5GU61 0 B1 2 pieces 7.9 Adipose Tissue Adipose - Visceral (Omentum) 0010414 169 1272 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.991584 243225 0.978495 0.994085 0.846675 21302 1 76 0.00179747 131 0 5.62096e+07 0.0212504 581717 5.65441e+07 3.76086e+06 21321 2.79681e+07 0 0.13182 0.994085 0.841667 5.62096e+07 0.00273907 1.25132e+07 5.06754e+06 1.26255e+07 147 1.25973e+07 9.69964e+06 0.00226709 1.26758e+07 50.1553 0.0102878 0.996586 0 50.2233 GTEX-11XUK-2026-SM-5EQLF 0 B1 6 pieces; well trimmed; up to 20% intradermal fat 7.5 Skin Skin - Sun Exposed (Lower leg) 0004264 334 1107 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.989337 232635 0.972617 0.99213 0.802375 23486 1 76 0.00209969 184 0 6.64911e+07 0.0271199 324203 6.70186e+07 9.84550e+06 23511 3.30777e+07 0 0.170242 0.99213 0.79606 6.64911e+07 0.00321501 1.4496e+07 7.64522e+06 1.45817e+07 155 1.4593e+07 1.19179e+07 0.00265578 1.46628e+07 50.1193 0.00483751 0.994922 0 50.1473 GTEX-11XUK-2126-SM-5EQLR 0 B1 2 pieces 7.3 Adipose Tissue Adipose - Subcutaneous 0002190 335 1106 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.991651 198640 0.976542 0.99368 0.815123 22848 1 76 0.00204091 162 0 6.79831e+07 0.0231698 597976 6.84155e+07 8.90570e+06 22867 3.38497e+07 0 0.161419 0.99368 0.809971 6.79831e+07 0.00291732 1.50622e+07 7.19259e+06 1.51304e+07 170 1.51049e+07 1.12034e+07 0.00247822 1.52198e+07 50.1894 0.00874035 0.995708 0 50.1129 GTEX-11XUK-2226-SM-5CVLL 0 B1 2 pieces 6.8 Muscle Muscle - Skeletal 0011907 338 1103 BP-44525 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.987513 223110 0.983408 0.99143 0.878565 19900 1 76 0.00468555 136 0 6.72548e+07 0.0163927 1.66271e+06 6.78362e+07 1.33445e+07 19908 3.33913e+07 0 0.104843 0.99143 0.871035 6.72548e+07 0.00663009 1.47264e+07 9.90133e+06 1.4891e+07 149 1.48481e+07 1.27792e+07 0.00565398 1.50036e+07 50.2604 0.0245107 0.995346 0 50.2778 GTEX-11XUK-2326-SM-5CVLM 0 B1 2 pieces; no extraneous fat 7.1 Nerve Nerve - Tibial 0001323 342 1099 BP-44525 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.985127 285723 0.972208 0.989709 0.776607 23615 1 76 0.00475817 147 0 7.12126e+07 0.0275415 316439 7.19531e+07 1.32624e+07 23648 3.5305e+07 0 0.195602 0.989709 0.768614 7.12126e+07 0.00713746 1.56331e+07 6.86053e+06 1.57669e+07 146 1.58521e+07 1.13416e+07 0.00594231 1.58595e+07 50.0117 0.00439785 0.99429 0 50.2131 GTEX-11XUK-2426-SM-5GU72 0 B1 2 pieces; no lesions 7.3 Blood Vessel Artery - Tibial 0007610 345 1096 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.988761 248394 0.976761 0.991538 0.850192 20373 1 76 0.0018397 133 0 5.98801e+07 0.0228303 297745 6.03911e+07 3.9343e+06 20381 2.97489e+07 0 0.126569 0.991538 0.842998 5.98801e+07 0.00282599 1.2888e+07 4.1919e+06 1.30476e+07 146 1.30097e+07 1.2044e+07 0.00233146 1.30857e+07 50.1455 0.00493028 0.994315 0 50.3076 GTEX-11XUK-5016-SM-AN3X4 B1 Muscle Muscle - Skeletal 0011907 337 ChIP-Seq GTEX-11ZTS-0001-SM-58Q8K B1 Blood Whole Blood 0013756 581 BP-40422 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/05/2013 LCSET-4574 01/20/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-11ZTS-0001-SM-5DWTD B1 Blood Whole Blood 0013756 581 BP-40422 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/05/2013 GTEx_OM25_Dec_01 01/29/2014 Illumina OMNI SNP Array OMNI GTEX-11ZTS-0001-SM-6WBU5 B1 Blood Whole Blood 0013756 581 BP-40422 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/05/2013 LCSET-6056 09/22/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-11ZTS-0005-SM-5NQ8A B1 8.7 Blood Whole Blood 0013756 581 BP-40461 RNA isolation_PAXgene Blood RNA (Manual) 07/08/2013 LCSET-4906 03/22/2014 TruSeq.v1 RNASEQ 0.978753 433080 0.974883 0.980834 0.793671 18652 1 76 0.00241311 102 0 7.18894e+07 0.0239615 246946 7.32941e+07 6.18659e+06 18659 3.5751e+07 0 0.181211 0.980834 0.77846 7.18894e+07 0.00365671 1.65852e+07 9.18862e+07 1.67911e+07 123 1.67976e+07 1.72895e+07 0.00303359 1.67447e+07 49.9212 0.00336925 0.982916 0 50.3084 GTEX-11ZTS-0008-SM-5S2VC B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 599 BP-45532 RNA isolation_Trizol Manual (Cell Pellet) 11/06/2013 LCSET-4996 04/03/2014 TruSeq.v1 RNASEQ 0.991132 455670 0.976377 0.994111 0.871672 19935 1 76 0.00161994 171 0 7.88786e+07 0.0233816 496129 7.93459e+07 7.5567e+06 19945 3.92486e+07 0 0.104704 0.994111 0.866539 7.88786e+07 0.0027286 1.75607e+07 1.26315e+07 1.77342e+07 185 1.7746e+07 1.92457e+07 0.00217261 1.77884e+07 50.0596 0.00625274 0.99709 0 50.2458 GTEX-11ZTS-0011-R10a-SM-DO93S B1, A1 7.6 Brain Brain - Frontal Cortex (BA9) 0009834 608 BP-43067 RNA isolation_PAXgene Tissue miRNA 09/04/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.995542 485250 0.968285 0.996199 0.855949 22921 1 76 0.00178745 270 0 8.83908e+07 0.0314035 6.6492e+06 8.8728e+07 4.60652e+06 22934 4.4069e+07 0 0.112336 0.996199 0.852696 8.83908e+07 0.00234001 1.93276e+07 1.92504e+07 1.96426e+07 330 1.94338e+07 9.05217e+06 0.00206355 1.9575e+07 50.181 0.0749391 0.996857 0 50.4041 GTEX-11ZTS-0011-R11a-SM-DO113 B1, A1 7.4 Brain Brain - Cerebellar Hemisphere 0002037 608 BP-43067 RNA isolation_PAXgene Tissue miRNA 09/04/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.985836 919220 0.95453 0.990488 0.788464 24853 1 76 0.00244951 275 0 1.22083e+08 0.0450682 3.31608e+06 1.23256e+08 1.25446e+07 24891 6.05713e+07 0 0.166066 0.990488 0.780964 1.22083e+08 0.00493578 2.64042e+07 2.48269e+07 2.66922e+07 330 2.68636e+07 1.49446e+07 0.0036868 2.67341e+07 49.8792 0.0269041 0.995141 0 50.2712 GTEX-11ZTS-0011-R1a-SM-5BC71 B1, A1 7.9 Brain Brain - Hippocampus 0001954 608 BP-43229 RNA isolation_PAXgene Tissue miRNA 09/06/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.980507 484076 0.959334 0.984976 0.834747 22357 1 76 0.0030091 200 0 6.99234e+07 0.040398 6.30754e+06 7.099e+07 1.96601e+07 22372 3.46804e+07 0 0.124588 0.984976 0.822205 6.99234e+07 0.00530397 1.52905e+07 1.94615e+07 1.55459e+07 213 1.53509e+07 7.01323e+06 0.00415133 1.57631e+07 50.6623 0.088851 0.989444 0 50.4142 GTEX-11ZTS-0011-R2b-SM-5BC75 B1, A1 7.6 Brain Brain - Substantia nigra 0002038 608 BP-43229 RNA isolation_PAXgene Tissue miRNA 09/06/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.986252 513489 0.959482 0.99105 0.816296 23235 1 76 0.00276011 204 0 7.05541e+07 0.0402485 5.53526e+06 7.11913e+07 2.03904e+07 23252 3.50204e+07 0 0.143186 0.99105 0.80899 7.05541e+07 0.00515433 1.54808e+07 1.87249e+07 1.55105e+07 207 1.53734e+07 7.27319e+06 0.00395142 1.5945e+07 50.9125 0.0777519 0.995847 0 50.0481 GTEX-11ZTS-0011-R3a-SM-5BC78 B1, A1 7.1 Brain Brain - Anterior cingulate cortex (BA24) 0009835 608 BP-43229 RNA isolation_PAXgene Tissue miRNA 09/06/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.986623 361167 0.972562 0.991388 0.842209 21367 1 76 0.0028033 177 0 6.27066e+07 0.0272342 7.05479e+06 6.32513e+07 1.59574e+07 21377 3.11182e+07 0 0.130354 0.991388 0.834956 6.27066e+07 0.00551912 1.38239e+07 2.3731e+07 1.37064e+07 208 1.33604e+07 4.35851e+06 0.00415468 1.44407e+07 51.943 0.111536 0.996154 0 49.7867 GTEX-11ZTS-0011-R8a-SM-57WDI B1, A1 6.3 Brain Brain - Hypothalamus 0001898 608 BP-43316 RNA isolation_PAXgene Tissue miRNA 09/09/2013 LCSET-4415 12/21/2013 TruSeq.v1 RNASEQ 0.989389 491553 0.964383 0.992278 0.82874 22347 1 76 0.00207404 266 0 7.22541e+07 0.035479 7.37336e+06 7.28163e+07 8.93076e+06 22360 3.59448e+07 0 0.135643 0.992278 0.82234 7.22541e+07 0.00399031 1.57791e+07 2.8129e+07 1.58308e+07 291 1.55598e+07 4.75775e+06 0.00302938 1.62165e+07 51.0333 0.10126 0.995168 0 50.0817 GTEX-11ZTS-0011-R9b-SM-DO93Q B1, A1 7.3 Brain Brain - Spinal cord (cervical c-1) 0006469 608 BP-43067 RNA isolation_PAXgene Tissue miRNA 09/04/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.995012 505094 0.964025 0.995691 0.843947 23150 1 76 0.00195657 387 0 9.2809e+07 0.0357268 7.0473e+06 9.32106e+07 5.63997e+06 23175 4.62655e+07 0 0.120078 0.995691 0.840311 9.2809e+07 0.00252176 2.04259e+07 1.66554e+07 2.09432e+07 343 2.0642e+07 9.73089e+06 0.00223897 2.07848e+07 50.1724 0.0756062 0.99637 0 50.6251 GTEX-11ZTS-0126-SM-5EQ6M 0 B1 6 pieces, minimal dermal fat, squamous epithelium is ~50 microns 7.4 Skin Skin - Sun Exposed (Lower leg) 0004264 599 866 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.991553 319585 0.969083 0.993543 0.789386 23415 1 76 0.00203634 198 0 7.40594e+07 0.0307039 586570 7.45407e+07 8.65234e+06 23442 3.68691e+07 0 0.179696 0.993543 0.784289 7.40594e+07 0.00303851 1.60763e+07 1.02519e+07 1.61965e+07 185 1.6155e+07 1.1338e+07 0.00253642 1.62555e+07 50.155 0.00786912 0.995532 0 50.1863 GTEX-11ZTS-0226-SM-5EQKD 0 B1 2 pieces, ~10% fibrovascular tissue, delineated 6.7 Adipose Tissue Adipose - Subcutaneous 0002190 600 865 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.98677 254690 0.974592 0.988943 0.786797 23309 1 76 0.00212491 166 0 7.39509e+07 0.0251206 433421 7.47777e+07 9.29407e+06 23341 3.68029e+07 0 0.187795 0.988943 0.778097 7.39509e+07 0.00317814 1.63316e+07 7.60531e+06 1.64e+07 176 1.63942e+07 1.21186e+07 0.00265037 1.64922e+07 50.1489 0.00579612 0.991116 0 50.1045 GTEX-11ZTS-0326-SM-5EQKP 0 B1 2 pieces adherent fascia/connective tissue up to ~0.7mm, delineated 7.2 Blood Vessel Artery - Tibial 0007610 602 863 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.990923 186000 0.976709 0.993222 0.809635 21787 1 76 0.00205062 143 0 6.64533e+07 0.0229099 358257 6.69068e+07 8.42878e+06 21806 3.30541e+07 0 0.167074 0.993222 0.804147 6.64533e+07 0.00336448 1.43783e+07 5.36606e+06 1.4489e+07 154 1.44719e+07 1.20969e+07 0.00270603 1.45449e+07 50.1258 0.00535456 0.995521 0 50.1918 GTEX-11ZTS-0526-SM-5CVL9 0 B1 2 pieces, ~35% adherent, interstitial fat, focally delineated 7.2 Muscle Muscle - Skeletal 0011907 605 860 BP-44525 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.98816 211477 0.984048 0.991845 0.856777 19505 1 76 0.00462499 123 0 7.22772e+07 0.0157211 1.03345e+06 7.28714e+07 1.40735e+07 19522 3.58999e+07 0 0.127271 0.991845 0.84979 7.22772e+07 0.00672081 1.59168e+07 1.02698e+07 1.57705e+07 155 1.57733e+07 1.33193e+07 0.00566901 1.61488e+07 50.5882 0.0141818 0.995531 0 49.7692 GTEX-11ZTS-0826-SM-5EQ49 1 B1 6 pieces, minimal atherosis, adherent serosa ~0.5mm thick 7.6 Blood Vessel Artery - Aorta 0001496 634 831 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.991259 286270 0.974225 0.993473 0.787006 22564 1 76 0.0020243 164 0 7.8193e+07 0.0253177 218751 7.87068e+07 9.59407e+06 22595 3.8885e+07 0 0.187219 0.993473 0.781869 7.8193e+07 0.00297161 1.68405e+07 7.01915e+06 1.69934e+07 176 1.69852e+07 1.42178e+07 0.0024969 1.70167e+07 50.0463 0.00277932 0.995687 0 50.2259 GTEX-11ZTS-1026-SM-5LU8O 1 B1 2 pieces, one is artery, ~30% atherotic occlusion; other is fibrous tissue, delineated by X 6.5 Blood Vessel Artery - Coronary 0001621 645 820 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.989685 325061 0.972272 0.991717 0.781589 22930 1 76 0.00462497 145 0 7.30479e+07 0.0273688 440402 7.36581e+07 5.97964e+06 22950 3.62832e+07 0 0.190683 0.991717 0.775115 7.30479e+07 0.00384043 1.56811e+07 6.58766e+06 1.57637e+07 156 1.57465e+07 1.21359e+07 0.00423351 1.58441e+07 50.1545 0.00597901 0.993749 0 50.1314 GTEX-11ZTS-1126-SM-5LU9X 1 B1 2 pieces, nodular goiter, regresive changes 5.9 Thyroid Thyroid 0002046 648 817 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.989233 235987 0.963158 0.991005 0.701047 24037 1 76 0.00470783 114 0 6.25006e+07 0.0365737 837303 6.30679e+07 5.4592e+06 24069 3.10699e+07 0 0.262111 0.991005 0.694741 6.25006e+07 0.00384942 1.3667e+07 8.11325e+06 1.37455e+07 133 1.37349e+07 6.69681e+06 0.0042794 1.37853e+07 50.0916 0.0132762 0.992776 0 50.1432 GTEX-11ZTS-1226-SM-5EQMQ 1 B1 2 pieces, mild congestion 7.5 Lung Lung 0008952 650 815 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.990733 193226 0.975383 0.992533 0.745888 23327 1 76 0.002414 159 0 7.56458e+07 0.02401 375337 7.62149e+07 9.79847e+06 23367 3.76489e+07 0 0.229495 0.992533 0.740318 7.56458e+07 0.00328972 1.67704e+07 7.1058e+06 1.68661e+07 168 1.68662e+07 1.18647e+07 0.00285107 1.69036e+07 50.0555 0.00492472 0.994334 0 50.1422 GTEX-11ZTS-1326-SM-5EQMA 1 B1 2 pieces, good specimens 5.8 Adipose Tissue Adipose - Visceral (Omentum) 0010414 651 814 BP-43823 RNA Extraction from Paxgene-derived Lysate Plate Based 09/20/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.990148 226787 0.973579 0.992752 0.756692 23686 1 76 0.00216247 142 0 7.02517e+07 0.0261123 361572 7.07646e+07 8.56674e+06 23717 3.49332e+07 0 0.216886 0.992752 0.751208 7.02517e+07 0.00337976 1.55174e+07 7.33355e+06 1.55487e+07 163 1.55472e+07 1.05156e+07 0.00276952 1.5696e+07 50.2382 0.0051095 0.995355 0 50.0503 GTEX-11ZTS-1426-SM-5EQMM 1 B1 2 pieces, moderate congestion, minimal steatosis 6.1 Liver Liver 0001114 659 806 BP-43823 RNA Extraction from Paxgene-derived Lysate Plate Based 09/20/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.992001 387390 0.973913 0.993968 0.792814 22625 1 76 0.00214653 372 0 1.27707e+08 0.0259616 2.42075e+06 1.28482e+08 1.6934e+07 22656 6.36025e+07 0 0.181099 0.993968 0.788031 1.27707e+08 0.00305413 2.8072e+07 3.05988e+07 2.79e+07 338 2.78364e+07 1.42788e+07 0.00259943 2.8369e+07 50.4738 0.0188412 0.995934 0 49.8463 GTEX-11ZTS-1526-SM-5N9G7 1 B1 6 pieces, all muscularis, good specimens 5.7 Colon Colon - Sigmoid 0001159 663 802 BP-43823 RNA Extraction from Paxgene-derived Lysate Plate Based 09/20/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.989608 295216 0.968393 0.990917 0.767853 23612 1 76 0.00403485 270 0 9.39032e+07 0.0314394 1.4729e+06 9.47639e+07 4.87279e+06 23645 4.6682e+07 0 0.20054 0.990917 0.760879 9.39032e+07 0.00407723 2.02233e+07 8.82543e+06 2.03349e+07 261 2.02728e+07 1.23784e+07 0.00405601 2.04048e+07 50.1622 0.0155429 0.992226 0 50.1376 GTEX-11ZTS-1926-SM-5CVLA 1 B1 2 pieces,typical regressive/post menopausal atrophic changes 6.4 Ovary Ovary 0000992 683 782 BP-44525 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.986617 465277 0.955118 0.990458 0.766514 23572 1 76 0.00476292 136 0 7.16113e+07 0.0446031 92370 7.23012e+07 1.34708e+07 23597 3.55356e+07 0 0.188604 0.990458 0.7592 7.16113e+07 0.00682339 1.53161e+07 1.85499e+07 1.55466e+07 138 1.5601e+07 1.35044e+07 0.00578916 1.55284e+07 49.8834 0.00127757 0.9943 0 50.3735 GTEX-11ZTS-2326-SM-5EQMY 2 B1 2 piecesm inactive endometrium/autolyzing glands, delineated. Focal adenomyosis 5.8 Uterus Uterus 0000995 701 764 BP-43823 RNA Extraction from Paxgene-derived Lysate Plate Based 09/20/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.988733 302209 0.963653 0.990708 0.695277 23773 1 76 0.0022519 145 0 7.27884e+07 0.0361089 207151 7.34711e+07 8.94059e+06 23817 3.61977e+07 0 0.268376 0.990708 0.688816 7.27884e+07 0.00343199 1.58514e+07 7.44628e+06 1.59734e+07 155 1.59389e+07 9.94811e+06 0.00284077 1.60279e+07 50.1392 0.00281949 0.992683 0 50.1916 GTEX-11ZTS-2626-SM-5EGIC 1 B1 6 pieces, squamous mucosa is ~10% thickness 7.3 Esophagus Esophagus - Mucosa 0006920 707 758 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.98598 208582 0.975033 0.99028 0.800069 21111 1 76 0.00245599 114 0 5.52811e+07 0.0247047 505021 5.58237e+07 8.10974e+06 21123 2.74522e+07 0 0.174964 0.99028 0.792293 5.52811e+07 0.00548752 1.24204e+07 7.39966e+06 1.25018e+07 131 1.25461e+07 8.48133e+06 0.00396517 1.26071e+07 50.1211 0.00904671 0.994579 0 50.1633 GTEX-11ZTS-2726-SM-5EQLU 1 B1 6 pieces, all muscularis 5.8 Esophagus Esophagus - Gastroesophageal Junction 0004550 709 756 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.987666 260374 0.971723 0.990477 0.785007 22408 1 76 0.00225423 143 0 6.47745e+07 0.0280966 1.75851e+06 6.53972e+07 8.87096e+06 22431 3.219e+07 0 0.186716 0.990477 0.777531 6.47745e+07 0.00354658 1.41844e+07 6.7545e+06 1.42754e+07 171 1.42118e+07 7.30208e+06 0.00289857 1.44213e+07 50.3658 0.0268897 0.993288 0 50.1598 GTEX-11ZTS-3026-SM-5EQM7 1 B1 2 pieces, ~30% glandular tissue (delineated), rest is squamous mucosa/stroma, LDCACC beware of blind sampling. 8.5 Salivary Gland Minor Salivary Gland 0006330 719 746 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.989946 235501 0.976255 0.992398 0.79804 22445 1 76 0.00233896 142 0 6.91741e+07 0.023243 255826 6.9704e+07 8.99942e+06 22467 3.44243e+07 0 0.178215 0.992398 0.791973 6.91741e+07 0.00336136 1.56544e+07 1.04803e+07 1.57374e+07 150 1.57728e+07 1.32131e+07 0.0028489 1.57841e+07 50.0178 0.00367018 0.99485 0 50.1322 GTEX-11ZTS-3226-SM-5EGID 1 B1 2 pieces no abnormalities, Purkinje cells well seen, nuclei distinct, not significant ischemic change 6.1 Brain Brain - Cerebellum 0002037 776 689 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.978544 309605 0.946664 0.985109 0.725701 23775 1 76 0.00268782 154 0 7.23327e+07 0.0530845 1.82761e+06 7.34261e+07 1.31007e+07 23805 3.58239e+07 0 0.220963 0.985109 0.714895 7.23327e+07 0.00618315 1.56049e+07 2.13108e+07 1.56723e+07 174 1.57734e+07 7.01553e+06 0.00442384 1.59297e+07 50.2465 0.0248905 0.991673 0 50.1079 GTEX-11ZTS-3326-SM-5LU9Y 1 B1 1 piece, 6 mm portion of neurohypophysis delineated; 60% is adenohypophysis, ensquared; rest is dura 7 Pituitary Pituitary 0000007 782 683 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.99054 305582 0.96398 0.992658 0.743735 24546 1 76 0.00458576 121 0 6.1469e+07 0.0357989 496315 6.19236e+07 5.12038e+06 24577 3.05566e+07 0 0.220246 0.992658 0.738274 6.1469e+07 0.00402317 1.27011e+07 7.47638e+06 1.27533e+07 134 1.27578e+07 8.66456e+06 0.00430507 1.28237e+07 50.1287 0.00801496 0.994777 0 50.1024 GTEX-11ZTT-0002-SM-5S2PA B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -15 BP-45438 RNA isolation_Trizol Manual (Cell Pellet) 11/04/2013 LCSET-4988 04/01/2014 TruSeq.v1 RNASEQ 0.993153 524598 0.955072 0.994202 0.840539 19011 1 76 0.0019009 141 0 5.62036e+07 0.0443333 387322 5.65313e+07 2.9246e+06 19024 2.79851e+07 0 0.114533 0.994202 0.835666 5.62036e+07 0.00267683 1.22074e+07 1.65583e+07 1.23996e+07 137 1.23283e+07 1.16816e+07 0.00228845 1.23574e+07 50.0591 0.00685146 0.995251 0 50.3906 GTEX-11ZTT-0003-SM-58Q8I B1 Blood Whole Blood 0013756 -15 BP-40422 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/05/2013 LCSET-4574 01/20/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-11ZTT-0003-SM-5DWTB B1 Blood Whole Blood 0013756 -15 BP-40422 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/05/2013 GTEx_OM25_Dec_01 01/28/2014 Illumina OMNI SNP Array OMNI GTEX-11ZTT-0003-SM-6WBU4 B1 Blood Whole Blood 0013756 -15 BP-40422 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/05/2013 LCSET-6056 09/22/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-11ZTT-0006-SM-5N9FX B1 8.7 Blood Whole Blood 0013756 -15 BP-40461 RNA isolation_PAXgene Blood RNA (Manual) 07/08/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.977511 611062 0.971612 0.979133 0.814461 18509 1 76 0.00444365 123 0 9.47854e+07 0.0274473 207573 9.68055e+07 4.58425e+06 18515 4.71159e+07 0 0.157151 0.979133 0.797466 9.47854e+07 0.00444944 2.17078e+07 1.00847e+08 2.20082e+07 158 2.20288e+07 2.41697e+07 0.00444654 2.18502e+07 49.7965 0.00214423 0.980755 0 50.3435 GTEX-11ZTT-0008-SM-5S2TZ B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 246 BP-45532 RNA isolation_Trizol Manual (Cell Pellet) 11/06/2013 LCSET-4996 04/03/2014 TruSeq.v1 RNASEQ 0.993643 508782 0.975384 0.995347 0.875641 20423 1 76 0.00167132 279 0 9.99831e+07 0.0243435 617633 1.00451e+08 9.94938e+06 20440 4.98235e+07 0 0.0997422 0.995347 0.871567 9.99831e+07 0.0024518 2.21592e+07 1.74368e+07 2.22966e+07 282 2.22859e+07 2.43356e+07 0.00206089 2.23451e+07 50.0664 0.00614863 0.997051 0 50.1545 GTEX-11ZTT-0426-SM-5EQLK 1 B1 2 pieces, calcific atherosclerosis 8 Blood Vessel Artery - Coronary 0001621 167 1156 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.991786 239353 0.974919 0.993647 0.839506 22733 1 76 0.00205267 163 0 7.36359e+07 0.0246763 405730 7.41068e+07 9.62905e+06 22747 3.66647e+07 0 0.135413 0.993647 0.834173 7.36359e+07 0.00310035 1.59877e+07 6.29561e+06 1.60991e+07 178 1.60339e+07 1.3901e+07 0.00257553 1.61836e+07 50.2322 0.00547494 0.995508 0 50.1736 GTEX-11ZTT-0526-SM-5EQLA 1 B1 2 pieces, each ~50-60% fat/fibrous tissue 6.9 Heart Heart - Atrial Appendage 0006631 168 1155 BP-43823 RNA Extraction from Paxgene-derived Lysate Plate Based 09/20/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.990398 285526 0.978687 0.992796 0.82319 21973 1 76 0.00215572 267 0 8.48163e+07 0.0210429 1.77989e+06 8.54318e+07 1.22182e+07 21990 4.22255e+07 0 0.155497 0.992796 0.817259 8.48163e+07 0.00303929 1.79903e+07 2.01287e+07 1.77311e+07 258 1.76251e+07 1.34359e+07 0.00259644 1.82873e+07 50.922 0.0208341 0.995194 0 49.6372 GTEX-11ZTT-0626-SM-5EQLM 0 B1 2 pieces, includes pleura (target is 1 cm below pleura), some fibrosis, atelectasis, and emphysematous change, scattered neutrophils 6.3 Lung Lung 0008952 172 1151 BP-43823 RNA Extraction from Paxgene-derived Lysate Plate Based 09/20/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.991861 297989 0.969782 0.993673 0.786761 25195 1 76 0.00225279 206 0 8.47294e+07 0.0297344 442690 8.52689e+07 1.04675e+07 25231 4.21881e+07 0 0.183021 0.993673 0.781782 8.47294e+07 0.0031886 1.86183e+07 8.32536e+06 1.87421e+07 222 1.87106e+07 1.48622e+07 0.00271984 1.87931e+07 50.1099 0.00519169 0.995484 0 50.1658 GTEX-11ZTT-0926-SM-5EQMS 0 B1 6 pieces 8 Esophagus Esophagus - Muscularis 0004648 180 1143 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.991127 253357 0.975065 0.99318 0.82617 22145 1 76 0.00209523 166 0 7.47809e+07 0.0246655 578318 7.52944e+07 9.85323e+06 22158 3.7232e+07 0 0.148895 0.99318 0.820536 7.47809e+07 0.00307545 1.61474e+07 7.2293e+06 1.62276e+07 187 1.61734e+07 1.27896e+07 0.00258433 1.63511e+07 50.2731 0.00768075 0.995234 0 50.1238 GTEX-11ZTT-1026-SM-5EQKF 2 B1 2 pieces, one piece is ~30% fibrous tissue and large vessels 7.5 Thyroid Thyroid 0002046 183 1140 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.992092 228146 0.971229 0.993822 0.769946 22979 1 76 0.00209594 161 0 7.41835e+07 0.0285152 385991 7.46447e+07 8.84465e+06 23008 3.69524e+07 0 0.201283 0.993822 0.765189 7.41835e+07 0.00300662 1.63118e+07 7.77292e+06 1.63928e+07 168 1.63636e+07 1.2313e+07 0.00255048 1.64563e+07 50.1413 0.00517104 0.995551 0 50.1238 GTEX-11ZTT-1626-SM-5EQKR 1 B1 6 pieces, 2 pieces include mucosa (not target) 8.2 Colon Colon - Sigmoid 0001159 206 1117 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.992696 159528 0.977351 0.994387 0.843038 20693 1 76 0.0020114 121 0 5.33208e+07 0.0223381 456858 5.36217e+07 6.55372e+06 20703 2.65612e+07 0 0.134313 0.994387 0.838306 5.33208e+07 0.00291844 1.15375e+07 4.70686e+06 1.1568e+07 127 1.15304e+07 9.8588e+06 0.00246414 1.16624e+07 50.2845 0.00852001 0.996078 0 50.0659 GTEX-11ZTT-1726-SM-5EQL4 1 B1 2 pieces, myometrium, some vascular calcification 7.9 Uterus Uterus 0000995 204 1119 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.991438 235939 0.969434 0.993355 0.776983 23606 1 76 0.00215228 163 0 7.4441e+07 0.0302535 324966 7.49389e+07 9.35912e+06 23640 3.70651e+07 0 0.192451 0.993355 0.77182 7.4441e+07 0.00315566 1.6191e+07 7.21265e+06 1.62602e+07 167 1.62414e+07 1.28169e+07 0.002653 1.63449e+07 50.1589 0.00433641 0.995273 0 50.1067 GTEX-11ZTT-1826-SM-5CVLN 1 B1 2 pieces, several corpora albicantia, hilus with numerous vessels, rete ovarii 6.6 Ovary Ovary 0000992 207 1116 BP-44525 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.986413 205901 0.970933 0.990228 0.762865 22848 1 76 0.00491417 121 0 6.35354e+07 0.0288204 174791 6.41624e+07 1.19529e+07 22877 3.15341e+07 0 0.208068 0.990228 0.755411 6.35354e+07 0.00671176 1.3998e+07 7.06756e+06 1.40648e+07 127 1.41138e+07 1.01712e+07 0.0058095 1.41783e+07 50.114 0.0027242 0.994044 0 50.119 GTEX-11ZTT-2126-SM-5CVLO 1 B1 6 pieces, some with attached and internal fat from 10-20% 7.7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 227 1096 BP-44525 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.981791 188969 0.973831 0.98784 0.809191 22659 1 76 0.00490748 153 0 6.08985e+07 0.0259756 529576 6.16481e+07 1.24444e+07 22674 3.01587e+07 0 0.16464 0.98784 0.799352 6.08985e+07 0.00792356 1.33019e+07 7.3157e+06 1.3397e+07 131 1.34661e+07 9.95343e+06 0.00640628 1.35829e+07 50.2159 0.0085903 0.993889 0 50.178 GTEX-11ZTT-2226-SM-5CVLP 0 B1 4 pieces, very good specimen, small attachment of stroma and skeletal muscle 7.3 Salivary Gland Minor Salivary Gland 0006330 234 1089 BP-44525 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.983967 242389 0.97166 0.986907 0.796288 25114 1 76 0.0054002 178 0 7.87905e+07 0.0267754 295827 7.98358e+07 1.30345e+07 25140 3.90855e+07 0 0.175372 0.986907 0.785862 7.87905e+07 0.00704905 1.77143e+07 2.08694e+07 1.76919e+07 174 1.77386e+07 1.27289e+07 0.00622217 1.7889e+07 50.2111 0.00370544 0.989846 0 49.9683 GTEX-11ZTT-2326-SM-5EQLG 1 B1 2 pieces, fat only 7.1 Breast Breast - Mammary Tissue 0008367 236 1087 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.991808 206434 0.9782 0.993808 0.832401 20959 1 76 0.00217747 141 0 6.18391e+07 0.0215372 533015 6.22244e+07 7.71595e+06 20976 3.07928e+07 0 0.145799 0.993808 0.827247 6.18391e+07 0.00323152 1.38014e+07 6.38552e+06 1.3745e+07 157 1.37387e+07 9.82064e+06 0.00270343 1.39211e+07 50.3297 0.00856602 0.995809 0 49.8975 GTEX-11ZTT-2426-SM-5EQLS 1 B1 6 pieces, all contain residual attached adipose tissue from 10-30%, squamous epithelium measures 30-40 microns 7.3 Skin Skin - Sun Exposed (Lower leg) 0004264 247 1076 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.991509 181215 0.972468 0.993562 0.797032 22850 1 76 0.00218125 144 0 5.9208e+07 0.027301 304936 5.95917e+07 7.3155e+06 22871 2.94797e+07 0 0.175436 0.993562 0.791901 5.9208e+07 0.00333601 1.29888e+07 5.98261e+06 1.3056e+07 140 1.30462e+07 9.99295e+06 0.00275744 1.31139e+07 50.1294 0.00511709 0.995614 0 50.129 GTEX-11ZTT-2526-SM-5EQM9 1 B1 2 pieces, <10% is fibrous/vascular 7.1 Adipose Tissue Adipose - Subcutaneous 0002190 249 1074 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.988512 331539 0.976964 0.991154 0.821037 22783 1 76 0.0021843 205 0 8.30186e+07 0.0227558 499187 8.37596e+07 1.04991e+07 22808 4.12959e+07 0 0.155927 0.991154 0.813774 8.30186e+07 0.00347504 1.83171e+07 8.36498e+06 1.84277e+07 213 1.84042e+07 1.38961e+07 0.00282795 1.85504e+07 50.1979 0.00595976 0.993796 0 50.1505 GTEX-11ZTT-2626-SM-5EQKK 1 B1 2 pieces, both include attached fat (20 and 50%) 8.2 Muscle Muscle - Skeletal 0011907 256 1067 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.992459 230940 0.981458 0.99438 0.869645 20081 1 76 0.00205067 206 0 8.0608e+07 0.0183178 1.26231e+06 8.10636e+07 1.05899e+07 20090 4.01575e+07 0 0.111813 0.99438 0.864758 8.0608e+07 0.0029683 1.77049e+07 1.21242e+07 1.76815e+07 246 1.76119e+07 1.52073e+07 0.0025086 1.79235e+07 50.4385 0.0155718 0.9963 0 49.9668 GTEX-11ZTT-5001-SM-AN3YD B1 Heart Heart - Left Ventricle 0006566 165 ChIP-Seq GTEX-11ZU8-0001-SM-58Q8J B1 Blood Whole Blood 0013756 592 BP-40422 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/05/2013 LCSET-4574 01/20/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-11ZU8-0001-SM-5DWTC B1 Blood Whole Blood 0013756 592 BP-40422 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/05/2013 GTEx_OM25_Dec_01 01/28/2014 Illumina OMNI SNP Array OMNI GTEX-11ZU8-0001-SM-DLIPQ B1 Blood Whole Blood 0013756 592 BP-40422 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/05/2013 LCSET-10442 01/23/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-11ZU8-0005-SM-5PNU5 B1 6.2 Blood Whole Blood 0013756 592 BP-40461 RNA isolation_PAXgene Blood RNA (Manual) 07/08/2013 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.959896 127950 0.990429 0.961668 0.814633 15279 1 76 0.00202821 81 0 8.02607e+07 0.00789042 199250 8.34599e+07 8.86985e+06 15279 3.99064e+07 0 0.175796 0.961668 0.783407 8.02607e+07 0.00355864 1.92634e+07 1.49175e+08 1.96148e+07 115 1.96066e+07 2.33686e+07 0.00279202 1.94295e+07 49.7732 0.00238737 0.96344 0 50.452 GTEX-11ZU8-0008-SM-5S2VO B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 1020 BP-45532 RNA isolation_Trizol Manual (Cell Pellet) 11/06/2013 LCSET-4996 04/03/2014 TruSeq.v1 RNASEQ 0.992308 386088 0.975482 0.994471 0.862995 20195 1 76 0.00167715 166 0 8.20951e+07 0.0242561 497773 8.25515e+07 8.18552e+06 20206 4.08873e+07 0 0.112487 0.994471 0.858224 8.20951e+07 0.00256757 1.83869e+07 1.35311e+07 1.85134e+07 202 1.85194e+07 2.01888e+07 0.00212139 1.85622e+07 50.0577 0.00602984 0.996635 0 50.1715 GTEX-11ZU8-0011-R3a-SM-5BC6U B1, A1 6 Brain Brain - Anterior cingulate cortex (BA24) 0009835 781 BP-43234 RNA isolation_PAXgene Tissue miRNA 09/06/2013 LCSET-4455 01/18/2014 TruSeq.v1 EXCLUDE 0.986333 519848 0.953185 0.991247 0.82765 21061 1 76 0.00255995 174 0 6.01831e+07 0.0465364 3.92407e+06 6.07145e+07 1.48428e+07 21074 2.98484e+07 0 0.125535 0.991247 0.820406 6.01831e+07 0.00527027 1.32069e+07 1.31673e+07 1.32674e+07 171 1.30806e+07 7.26639e+06 0.00390839 1.36953e+07 51.1478 0.0646315 0.996162 0 50.1142 GTEX-11ZU8-0011-R4a-SM-5BC6Y B1, A1 7.1 Brain Brain - Amygdala 0001876 781 BP-43234 RNA isolation_PAXgene Tissue miRNA 09/06/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.985879 350367 0.973688 0.991047 0.874097 19533 1 76 0.00283447 152 0 5.69819e+07 0.02615 8.24056e+06 5.74967e+07 1.44657e+07 19541 2.8266e+07 0 0.0995909 0.991047 0.866271 5.69819e+07 0.00547553 1.28748e+07 1.98319e+07 1.23738e+07 194 1.2199e+07 3.86149e+06 0.00414812 1.33202e+07 52.1968 0.143322 0.996214 0 49.0078 GTEX-11ZU8-0126-SM-5EQ58 0 B1 6 pieces, no dermal fat 6.5 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 806 640 BP-44901 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.990888 187144 0.972982 0.993457 0.807814 21434 1 76 0.0020548 149 0 5.8784e+07 0.0267742 424039 5.91712e+07 7.47689e+06 21455 2.92418e+07 0 0.165168 0.993457 0.802528 5.8784e+07 0.00323327 1.29211e+07 7.41736e+06 1.29791e+07 144 1.29682e+07 9.6901e+06 0.00264252 1.30765e+07 50.208 0.00716631 0.996025 0 50.112 GTEX-11ZU8-1126-SM-5EQ5K 1 B1 6 pieces, all muscularis, good specimens 6.3 Colon Colon - Sigmoid 0001159 864 582 BP-44901 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.99069 296736 0.973574 0.993337 0.822646 21536 1 76 0.00193381 144 0 6.60897e+07 0.0261501 186184 6.6533e+07 8.76689e+06 21555 3.28661e+07 0 0.150928 0.993337 0.817165 6.60897e+07 0.00311145 1.41025e+07 7.21172e+06 1.42508e+07 157 1.42372e+07 1.17637e+07 0.00252106 1.4284e+07 50.0821 0.00279837 0.995984 0 50.2616 GTEX-11ZU8-1526-SM-5EGHX 1 B1 6 pieces, squamous mucosa is ~5% thickness 6.4 Esophagus Esophagus - Mucosa 0006920 872 574 BP-44901 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.983483 237398 0.973371 0.987904 0.753744 21218 1 76 0.00243407 119 0 5.78692e+07 0.0264248 584353 5.85778e+07 7.8127e+06 21239 2.87239e+07 0 0.219626 0.987904 0.744627 5.78692e+07 0.0057253 1.30715e+07 8.52619e+06 1.31009e+07 140 1.31258e+07 7.4218e+06 0.00407232 1.32981e+07 50.326 0.00997568 0.992325 0 50.056 GTEX-11ZU8-2326-SM-5EQMJ 0 B1 2 pieces ~30% interstitial fat, rep delineated 7.1 Muscle Muscle - Skeletal 0011907 1016 430 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.991389 222612 0.978621 0.993707 0.842806 20697 1 76 0.00194699 136 0 6.55861e+07 0.0211339 722697 6.60015e+07 8.82968e+06 20711 3.26488e+07 0 0.135816 0.993707 0.837502 6.55861e+07 0.00296159 1.43153e+07 6.79739e+06 1.43929e+07 151 1.43879e+07 1.3232e+07 0.00245311 1.4461e+07 50.1266 0.0109497 0.996025 0 50.1352 GTEX-11ZU8-2426-SM-5EQMV 0 B1 2 pieces, ~5% fibrovascular tissue, rep delineated 5.8 Adipose Tissue Adipose - Subcutaneous 0002190 1017 429 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.989572 255445 0.974382 0.991969 0.767535 22663 1 76 0.00224081 134 0 6.41345e+07 0.0253583 411725 6.46537e+07 8.35465e+06 22690 3.19003e+07 0 0.206848 0.991969 0.761371 6.41345e+07 0.00347828 1.42308e+07 9.49449e+06 1.42317e+07 152 1.42204e+07 9.55449e+06 0.00285805 1.43893e+07 50.2951 0.00636816 0.994366 0 50.0016 GTEX-11ZU8-2526-SM-5EQKI 0 B1 6 pieces, minimal fat, sqaumous epithelium is ~50-60 microns 7.9 Skin Skin - Sun Exposed (Lower leg) 0004264 1020 426 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.990729 382992 0.964483 0.993167 0.773038 23903 1 76 0.00212082 169 0 7.16968e+07 0.0352464 410191 7.21901e+07 8.3931e+06 23930 3.56726e+07 0 0.191445 0.993167 0.767756 7.16968e+07 0.00332669 1.55814e+07 1.29438e+07 1.57258e+07 161 1.57311e+07 1.2327e+07 0.00272228 1.57464e+07 50.0244 0.0056821 0.995605 0 50.2306 GTEX-11ZU8-2626-SM-5EQLL 0 B1 4 pieces, adherent nubbins of fat up to ~1mm, rep delineated 6.3 Nerve Nerve - Tibial 0001323 1022 424 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.990458 218021 0.95857 0.992525 0.678404 24352 1 76 0.00231832 149 0 6.81524e+07 0.0412071 295041 6.86657e+07 9.11698e+06 24391 3.3911e+07 0 0.280167 0.992525 0.673332 6.81524e+07 0.00337972 1.48957e+07 7.99745e+06 1.49678e+07 147 1.49535e+07 8.25577e+06 0.00284791 1.50442e+07 50.1512 0.00429677 0.994591 0 50.1207 GTEX-11ZUS-0003-SM-58Q8H C1 Blood Whole Blood 0013756 1222 BP-40422 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/05/2013 LCSET-4574 01/20/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-11ZUS-0003-SM-5DWTA C1 Blood Whole Blood 0013756 1222 BP-40422 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/05/2013 GTEx_OM25_Dec_01 01/29/2014 Illumina OMNI SNP Array OMNI GTEX-11ZUS-0003-SM-6WBU3 C1 Blood Whole Blood 0013756 1222 BP-40422 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/05/2013 LCSET-6056 09/22/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-11ZUS-0006-SM-5O9AJ C1 7.7 Blood Whole Blood 0013756 1222 BP-40461 RNA isolation_PAXgene Blood RNA (Manual) 07/08/2013 LCSET-4909 03/20/2014 TruSeq.v1 RNASEQ 0.984866 507455 0.961125 0.989556 0.675791 21075 1 76 0.0028118 117 0 6.26079e+07 0.0383403 188118 6.32686e+07 7.95726e+06 21102 3.10379e+07 0 0.285334 0.989556 0.668733 6.26079e+07 0.00466644 1.37591e+07 2.85719e+07 1.39588e+07 122 1.40533e+07 9.86101e+06 0.00373472 1.39657e+07 49.8436 0.00297332 0.994247 0 50.3602 GTEX-11ZUS-0008-SM-5S2UO C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 1360 BP-45532 RNA isolation_Trizol Manual (Cell Pellet) 11/06/2013 LCSET-4996 04/03/2014 TruSeq.v1 RNASEQ 0.993823 406664 0.978361 0.995388 0.87638 20044 1 76 0.00163396 281 0 9.50372e+07 0.0213591 387068 9.54776e+07 1.01611e+07 20062 4.7369e+07 0 0.101982 0.995388 0.872338 9.50372e+07 0.00231226 2.12263e+07 1.43168e+07 2.13519e+07 267 2.13444e+07 2.3397e+07 0.00197258 2.1381e+07 50.0428 0.00405402 0.996953 0 50.1476 GTEX-11ZUS-0011-R10a-SM-AHZMK C1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 1268 ChIP-Seq GTEX-11ZUS-0011-R10b-SM-5BC79 C1, A1 6.5 Brain Brain - Frontal Cortex (BA9) 0009834 1268 BP-43234 RNA isolation_PAXgene Tissue miRNA 09/06/2013 LCSET-4455 01/18/2014 TruSeq.v1 EXCLUDE 0.988539 442951 0.970153 0.992629 0.858514 23022 1 76 0.00253596 197 0 6.86541e+07 0.0294305 3.69532e+06 6.91639e+07 1.97164e+07 23037 3.4106e+07 0 0.11164 0.992629 0.852185 6.86541e+07 0.00473025 1.51731e+07 1.84192e+07 1.5112e+07 220 1.50482e+07 8.09378e+06 0.00362858 1.54785e+07 50.7049 0.0534285 0.996719 0 49.8992 GTEX-11ZUS-0011-R10b-SM-CYKOY C1, A1 6.5 Brain Brain - Frontal Cortex (BA9) 0009834 1268 BP-43234 RNA isolation_PAXgene Tissue miRNA 09/06/2013 RIP-Seq GTEX-11ZUS-0011-R11b-SM-5BC7B C1, A1 9.1 Brain Brain - Cerebellar Hemisphere 0002037 1268 BP-43234 RNA isolation_PAXgene Tissue miRNA 09/06/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.985635 642645 0.951202 0.99057 0.802755 22412 1 76 0.00268827 134 0 6.52203e+07 0.0482235 913333 6.58411e+07 1.82996e+07 22430 3.23491e+07 0 0.148447 0.99057 0.795185 6.52203e+07 0.00474232 1.40055e+07 1.41224e+07 1.41599e+07 155 1.42673e+07 9.89643e+06 0.00371017 1.42023e+07 49.8859 0.0138718 0.995506 0 50.2742 GTEX-11ZUS-0011-R8a-SM-5BC73 C1, A1 8.8 Brain Brain - Hypothalamus 0001898 1268 BP-43234 RNA isolation_PAXgene Tissue miRNA 09/06/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.988562 727455 0.957914 0.992779 0.868339 21878 1 76 0.00239105 151 0 6.06549e+07 0.041556 2.29329e+06 6.10961e+07 1.5209e+07 21889 3.01124e+07 0 0.0895756 0.992779 0.862068 6.06549e+07 0.00461138 1.33215e+07 1.5994e+07 1.32687e+07 170 1.32856e+07 8.75163e+06 0.0034965 1.35586e+07 50.5085 0.0375358 0.996995 0 49.9007 GTEX-11ZUS-0011-R9b-SM-5BC76 C1, A1 8.3 Brain Brain - Spinal cord (cervical c-1) 0006469 1268 BP-43234 RNA isolation_PAXgene Tissue miRNA 09/06/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.988502 654866 0.953291 0.992419 0.828943 22797 1 76 0.00239963 211 0 7.08106e+07 0.0463913 3.20875e+06 7.13516e+07 1.57757e+07 22811 3.51638e+07 0 0.124348 0.992419 0.822658 7.08106e+07 0.00471601 1.55481e+07 1.58703e+07 1.57147e+07 211 1.55348e+07 8.59532e+06 0.00355325 1.59971e+07 50.7331 0.044971 0.996335 0 50.2665 GTEX-11ZUS-0126-SM-5EQM5 1 C1 2 pieces, alveolar hemorrhage, edema, emphysematous change 6.5 Lung Lung 0008952 1345 1141 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.987882 182602 0.968504 0.990877 0.711713 24229 1 76 0.00251873 120 0 6.06171e+07 0.0308991 309807 6.11752e+07 8.54221e+06 24265 3.01244e+07 0 0.256792 0.990877 0.70522 6.06171e+07 0.00356281 1.33028e+07 6.46158e+06 1.33841e+07 129 1.34087e+07 8.73335e+06 0.00303919 1.3451e+07 50.0788 0.00506426 0.993872 0 50.1525 GTEX-11ZUS-0126-SM-CYKR8 1 C1 2 pieces, alveolar hemorrhage, edema, emphysematous change 6.5 Lung Lung 0008952 1345 1141 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 RIP-Seq GTEX-11ZUS-0226-SM-5FQT8 1 C1 2 pieces 7.6 Heart Heart - Left Ventricle 0006566 1347 1140 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.988997 235616 0.982898 0.992953 0.861027 20512 1 76 0.00206404 151 0 6.63584e+07 0.016865 1.91524e+06 6.68293e+07 9.48516e+06 20521 3.29804e+07 0 0.121871 0.992953 0.85496 6.63584e+07 0.00379301 1.47794e+07 1.07625e+07 1.45529e+07 171 1.46418e+07 1.17273e+07 0.00292508 1.49354e+07 50.4963 0.0286587 0.996909 0 49.6139 GTEX-11ZUS-0326-SM-5EQ4W 1 C1 2 pieces 6.8 Heart Heart - Atrial Appendage 0006631 1349 1138 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.989291 254717 0.973021 0.99278 0.810797 22275 1 76 0.00187773 143 0 6.11532e+07 0.0267869 1.7371e+06 6.1598e+07 6.90914e+06 22290 3.03874e+07 0 0.162224 0.99278 0.804942 6.11532e+07 0.00324882 1.33743e+07 1.04709e+07 1.32213e+07 169 1.31983e+07 7.60246e+06 0.00256087 1.35966e+07 50.7432 0.0282005 0.996268 0 49.7124 GTEX-11ZUS-0526-SM-59884 1 C1 2 pieces, abundant attached fat (80-90%) 6.8 Blood Vessel Artery - Coronary 0001621 1356 1133 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.979372 192811 0.970426 0.984081 0.791033 23358 1 76 0.0027697 134 0 6.32379e+07 0.029253 797142 6.42609e+07 1.3565e+07 23381 3.13689e+07 0 0.179393 0.984081 0.778441 6.32379e+07 0.00651506 1.3802e+07 1.05966e+07 1.38405e+07 148 1.38936e+07 9.56533e+06 0.00463342 1.40352e+07 50.2535 0.0124048 0.988789 0 50.0696 GTEX-11ZUS-0626-SM-59885 1 C1 6 pieces, 5 of 6 do not show squamous epithelium (? embedding) 8.4 Skin Skin - Sun Exposed (Lower leg) 0004264 1359 1131 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.981623 1.75757e+06 0.896344 0.986279 0.696736 24340 1 76 0.00267445 134 0 7.33408e+07 0.103218 737805 7.43611e+07 1.62823e+07 24366 3.64087e+07 0 0.199608 0.986279 0.687176 7.33408e+07 0.00633601 1.48646e+07 7.72787e+07 1.50709e+07 141 1.51707e+07 1.06756e+07 0.00449659 1.50946e+07 49.8743 0.00992193 0.990935 0 50.3446 GTEX-11ZUS-0726-SM-59886 1 C1 2 pieces, one is ~20% nerve and vessels 6 Adipose Tissue Adipose - Subcutaneous 0002190 1361 1129 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.983177 241500 0.973481 0.988461 0.799824 23394 1 76 0.00271285 142 0 7.31161e+07 0.0261819 344408 7.39696e+07 1.64706e+07 23421 3.62767e+07 0 0.173657 0.988461 0.790595 7.31161e+07 0.00668646 1.59101e+07 8.91500e+06 1.59465e+07 162 1.60572e+07 1.20304e+07 0.00468903 1.61541e+07 50.1504 0.00465607 0.993745 0 50.0571 GTEX-11ZUS-0826-SM-5FQUY 1 C1 2 pieces, predominantly fat, scant stroma and vessels 6.6 Breast Breast - Mammary Tissue 0008367 1363 1128 BP-43823 RNA Extraction from Paxgene-derived Lysate Plate Based 09/20/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.988389 224200 0.973469 0.991737 0.808561 22683 1 76 0.00232746 139 0 6.7028e+07 0.0262198 324534 6.75864e+07 9.78732e+06 22707 3.33198e+07 0 0.164909 0.991737 0.80188 6.7028e+07 0.00370938 1.46935e+07 8.29478e+06 1.4747e+07 164 1.47598e+07 1.07295e+07 0.00301609 1.4895e+07 50.228 0.00480176 0.995086 0 50.0908 GTEX-11ZUS-0926-SM-5FQSY 1 C1 6 pieces, well trimmed 6 Esophagus Esophagus - Muscularis 0004648 1365 1126 BP-43823 RNA Extraction from Paxgene-derived Lysate Plate Based 09/20/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.985734 350543 0.968113 0.989892 0.801318 24522 1 76 0.00227949 371 0 1.04048e+08 0.0316759 1.76691e+06 1.05111e+08 1.42142e+07 24553 5.16397e+07 0 0.166795 0.989892 0.793218 1.04048e+08 0.004062 2.25825e+07 1.18282e+07 2.25755e+07 352 2.25805e+07 1.27594e+07 0.003167 2.29724e+07 50.4301 0.01681 0.99405 0 49.9923 GTEX-11ZUS-1226-SM-5FQU8 0 C1 2 pieces, well trimmed 7.4 Nerve Nerve - Tibial 0001323 1378 1116 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.987844 270869 0.96576 0.991336 0.745752 24892 1 76 0.00237989 224 0 8.50857e+07 0.0338953 251959 8.58292e+07 1.21334e+07 24934 4.22891e+07 0 0.220009 0.991336 0.739291 8.50857e+07 0.00352822 1.86482e+07 8.78727e+06 1.8758e+07 210 1.8837e+07 1.36161e+07 0.00295203 1.88487e+07 50.0155 0.00293558 0.994829 0 50.1468 GTEX-11ZUS-1326-SM-5FQUC 1 C1 2 pieces, well trimmed 7.6 Blood Vessel Artery - Tibial 0007610 1380 1114 BP-43823 RNA Extraction from Paxgene-derived Lysate Plate Based 09/20/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.989299 258647 0.972284 0.992702 0.836996 21389 1 76 0.00214731 163 0 7.65857e+07 0.0273745 318220 7.71488e+07 1.05234e+07 21404 3.80691e+07 0 0.135287 0.992702 0.830888 7.65857e+07 0.00353372 1.61516e+07 6.84447e+06 1.62949e+07 193 1.63066e+07 1.42716e+07 0.00283814 1.6382e+07 50.1153 0.00412476 0.996104 0 50.2207 GTEX-11ZUS-1426-SM-5FQSP 1 C1 2 pieces 8.5 Muscle Muscle - Skeletal 0011907 1383 1114 BP-43823 RNA Extraction from Paxgene-derived Lysate Plate Based 09/20/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.990287 197733 0.985153 0.993296 0.874763 19328 1 76 0.00192176 199 0 8.05681e+07 0.0145928 798238 8.11119e+07 1.20679e+07 19333 4.00945e+07 0 0.11039 0.993296 0.868899 8.05681e+07 0.00317759 1.75751e+07 1.32415e+07 1.73575e+07 241 1.73369e+07 1.66167e+07 0.00254778 1.78106e+07 50.6738 0.0098412 0.996305 0 49.6885 GTEX-11ZUS-1826-SM-5FQTR 0 C1 2 pieces 6.8 Adipose Tissue Adipose - Visceral (Omentum) 0010414 1407 1093 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.989906 173585 0.976509 0.99277 0.805083 22694 1 76 0.00229984 133 0 6.08115e+07 0.0231547 339792 6.12544e+07 7.48046e+06 22712 3.02329e+07 0 0.171426 0.99277 0.799262 6.08115e+07 0.00387424 1.33344e+07 6.77480e+06 1.33541e+07 148 1.33501e+07 9.81674e+06 0.00308477 1.35069e+07 50.2919 0.00554722 0.995634 0 50.037 GTEX-11ZUS-2126-SM-5N9E6 2 C1 2 pieces, epithelium sloughing 5.7 Prostate Prostate 0002367 1413 1089 BP-43823 RNA Extraction from Paxgene-derived Lysate Plate Based 09/20/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.98706 366744 0.960845 0.98858 0.785027 26371 1 76 0.00407377 373 0 1.09143e+08 0.038953 1.69134e+06 1.10404e+08 5.12152e+06 26420 5.42228e+07 0 0.175817 0.98858 0.776062 1.09143e+08 0.00413739 2.3661e+07 1.159e+07 2.37786e+07 331 2.36883e+07 1.36575e+07 0.00410553 2.39154e+07 50.2385 0.0153196 0.9901 0 50.1239 GTEX-11ZUS-2526-SM-59872 2 C1 2 pieces, mild to moderate steatosis 6.7 Liver Liver 0001114 1426 1079 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.983699 197984 0.9744 0.987986 0.840057 20551 1 76 0.00253734 193 0 6.97845e+07 0.0255105 1.34824e+06 7.06331e+07 1.43908e+07 20563 3.46819e+07 0 0.134343 0.987986 0.829965 6.97845e+07 0.00611997 1.55883e+07 1.54298e+07 1.50738e+07 230 1.50441e+07 6.89559e+06 0.00432088 1.58585e+07 51.3177 0.0190879 0.992272 0 49.1611 GTEX-11ZUS-2626-SM-5FQUR 2 C1 6 pieces, few with minimal attached fat 6.4 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1433 1073 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.988486 192384 0.972766 0.991557 0.768278 23933 1 76 0.00222389 161 0 7.53737e+07 0.0270064 756974 7.60156e+07 9.71444e+06 23965 3.74736e+07 0 0.204488 0.991557 0.761791 7.53737e+07 0.00386162 1.66681e+07 9.65602e+06 1.66574e+07 181 1.66409e+07 1.09985e+07 0.00304022 1.6905e+07 50.3937 0.00995814 0.994627 0 49.984 GTEX-11ZUS-2726-SM-5FQUA 1 C1 2 pieces, active spermatogenesis, rete testis 6.1 Testis Testis 0000473 1435 1072 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.98766 427139 0.914374 0.990914 0.719145 34026 1 76 0.00226245 226 0 1.01365e+08 0.0852351 766232 1.02295e+08 1.47237e+07 34099 5.041e+07 0 0.195229 0.990914 0.712611 1.01365e+08 0.00343002 2.03879e+07 1.89572e+07 2.03849e+07 255 2.0483e+07 1.67154e+07 0.00284432 2.05825e+07 50.1212 0.00749044 0.994169 0 49.9963 GTEX-11ZUS-2826-SM-5EQKW 1 C1 4 pieces 6.7 Brain Brain - Cerebellum 0002037 1439 1068 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.988697 439784 0.944118 0.991289 0.703568 25277 1 76 0.00234747 271 0 1.00297e+08 0.0555395 1.13582e+06 1.01178e+08 1.29858e+07 25319 4.98665e+07 0 0.24055 0.991289 0.697439 1.00297e+08 0.00342744 2.15587e+07 1.81873e+07 2.17508e+07 273 2.17838e+07 1.20287e+07 0.00288604 2.17683e+07 49.9821 0.0112259 0.993881 0 50.2217 GTEX-11ZUS-2926-SM-5FQSL 1 C1 4 pieces 6.3 Brain Brain - Cortex 0001870 1440 1068 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.989423 296284 0.965186 0.992657 0.833929 23290 1 76 0.00216225 267 0 7.39918e+07 0.0343922 2.41163e+06 7.45391e+07 1.06578e+07 23304 3.67935e+07 0 0.131257 0.992657 0.827805 7.39918e+07 0.00350537 1.62829e+07 1.62137e+07 1.6184e+07 259 1.61341e+07 8.69868e+06 0.00283163 1.65533e+07 50.6412 0.0323539 0.995891 0 49.8477 GTEX-11ZUS-3026-SM-5EGI4 2 C1 1 pieces 8.2 Pituitary Pituitary 0000007 1440 1068 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.985461 228773 0.95916 0.990456 0.785039 24447 1 76 0.00238939 115 0 6.00371e+07 0.0405372 136089 6.06156e+07 1.00046e+07 24472 2.97959e+07 0 0.174121 0.990456 0.777547 6.00371e+07 0.00548983 1.28251e+07 8.69221e+06 1.29236e+07 133 1.30349e+07 1.02851e+07 0.0039318 1.29949e+07 49.923 0.00224512 0.995452 0 50.1914 GTEX-11ZVC-0004-SM-58Q8O B1 Blood Whole Blood 0013756 469 BP-40499 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/09/2013 LCSET-4574 01/20/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-11ZVC-0004-SM-5DWTH B1 Blood Whole Blood 0013756 469 BP-40499 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/09/2013 GTEx_OM25_Dec_01 01/28/2014 Illumina OMNI SNP Array OMNI GTEX-11ZVC-0004-SM-6WBU9 B1 Blood Whole Blood 0013756 469 BP-40499 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/09/2013 LCSET-6056 09/20/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-11ZVC-0006-SM-5N9GA B1 8.8 Blood Whole Blood 0013756 469 BP-40461 RNA isolation_PAXgene Blood RNA (Manual) 07/08/2013 LCSET-4905,LCSET-5337 04/10/2014 TruSeq.v1 RNASEQ 0.987832 710303 0.975784 0.988411 0.755668 21414 1 76 0.00219516 272 0 1.46456e+08 0.0235522 464813 1.48173e+08 7.20756e+06 21447 7.30091e+07 0 0.220116 0.988411 0.746911 1.46456e+08 0.00274937 3.32513e+07 9.15969e+07 3.3211e+07 313 3.31718e+07 3.01296e+07 0.00247211 3.33933e+07 50.1664 0.00313696 0.988991 0 49.9697 GTEX-11ZVC-0011-R1b-SM-5BC6M B1, A1 6.6 Brain Brain - Hippocampus 0001954 477 BP-43234 RNA isolation_PAXgene Tissue miRNA 09/06/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.982901 344079 0.971542 0.989729 0.85713 21323 1 76 0.00253331 153 0 5.90307e+07 0.0282773 8.2992e+06 5.96433e+07 1.61577e+07 21337 2.92344e+07 0 0.114412 0.989729 0.848326 5.90307e+07 0.00558065 1.31965e+07 1.72278e+07 1.29476e+07 200 1.27706e+07 4.31953e+06 0.00404647 1.37395e+07 51.8274 0.139147 0.996556 0 49.524 GTEX-11ZVC-0011-R3a-SM-5BC6V B1, A1 5.9 Brain Brain - Anterior cingulate cortex (BA24) 0009835 477 BP-43234 RNA isolation_PAXgene Tissue miRNA 09/06/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.982955 741510 0.974326 0.988944 0.842414 22791 1 76 0.00255311 518 0 1.37849e+08 0.0255262 2.25875e+07 1.39391e+08 4.17382e+07 22803 6.83366e+07 0 0.131912 0.988944 0.8331 1.37849e+08 0.00534071 2.98466e+07 6.93628e+07 3.03692e+07 487 2.96485e+07 8.11381e+06 0.00393847 3.12011e+07 51.2758 0.162045 0.994933 0 50.4339 GTEX-11ZVC-0011-R4a-SM-5BC6Z B1, A1 7 Brain Brain - Amygdala 0001876 477 BP-43234 RNA isolation_PAXgene Tissue miRNA 09/06/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.98688 518469 0.965033 0.991834 0.842593 22048 1 76 0.00251183 196 0 6.87279e+07 0.0347917 9.2544e+06 6.92938e+07 1.73143e+07 22062 3.41087e+07 0 0.12244 0.991834 0.835713 6.87279e+07 0.00516787 1.51953e+07 2.64649e+07 1.49335e+07 244 1.47951e+07 4.95197e+06 0.00383322 1.56351e+07 51.3803 0.133553 0.996789 0 49.5656 GTEX-11ZVC-0011-R9a-SM-57WC5 B1, A1 6.1 Brain Brain - Spinal cord (cervical c-1) 0006469 477 BP-43314 RNA isolation_PAXgene Tissue miRNA 09/09/2013 LCSET-4415 12/21/2013 TruSeq.v1 RNASEQ 0.989575 642204 0.9517 0.99253 0.829755 21594 1 76 0.00185294 219 0 6.90648e+07 0.0480346 5.9059e+06 6.95846e+07 8.76057e+06 21607 3.43485e+07 0 0.121946 0.99253 0.823557 6.90648e+07 0.00378112 1.51792e+07 1.94921e+07 1.53625e+07 226 1.50986e+07 6.9881e+06 0.00281416 1.56358e+07 50.8739 0.0848736 0.995485 0 50.3001 GTEX-11ZVC-0126-SM-5986G 1 B1 2 pieces 6.9 Thyroid Thyroid 0002046 520 637 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.983805 345581 0.962799 0.987853 0.698078 24881 1 76 0.00279629 133 0 7.65589e+07 0.0368964 355966 7.75003e+07 1.61022e+07 24929 3.80264e+07 0 0.264721 0.987853 0.689598 7.65589e+07 0.0060718 1.66651e+07 1.16953e+07 1.67468e+07 149 1.68497e+07 1.06126e+07 0.00442733 1.68549e+07 50.0076 0.00459309 0.991901 0 50.1224 GTEX-11ZVC-0226-SM-731E8 1 B1 2 pieces; fibrosis. vascular sclerosis; pleura present 6.7 Lung Lung 0008952 521 636 BP-44525 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-6196 12/20/2014 TruSeq.v1 RNASEQ 0.991483 415607 0.975359 0.993119 0.763489 24521 1 76 0.00359451 210 0 1.02256e+08 0.0241078 438175 1.02965e+08 1.23129e+07 24566 5.08544e+07 0 0.21187 0.993119 0.758235 1.02256e+08 0.00404366 2.26862e+07 8.8495e+06 2.27171e+07 244 2.28388e+07 1.71012e+07 0.00381872 2.27215e+07 49.8713 0.00425558 0.994755 0 50.034 GTEX-11ZVC-0326-SM-5CVLC 1 B1 6 pieces; well trimmed, free of plaques 6.1 Blood Vessel Artery - Aorta 0001496 525 632 BP-44525 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.985218 248454 0.973943 0.989142 0.779383 22743 1 76 0.00496005 133 0 7.21293e+07 0.0256004 167088 7.2921e+07 1.38334e+07 22766 3.57641e+07 0 0.19456 0.989142 0.770921 7.21293e+07 0.0070588 1.55234e+07 6.47569e+06 1.56844e+07 141 1.57418e+07 1.2579e+07 0.00600526 1.57359e+07 49.9907 0.00229136 0.993067 0 50.2579 GTEX-11ZVC-0426-SM-5CVLD 1 B1 2 pieces; 5% internal fat; patchy hypereosinophilia (possible early ischemia) 5.9 Heart Heart - Left Ventricle 0006566 528 629 BP-44525 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.986837 178751 0.982958 0.990682 0.824266 20898 1 76 0.00471346 194 0 7.49706e+07 0.0169387 3.96904e+06 7.56757e+07 1.51791e+07 20911 3.72332e+07 0 0.158692 0.990682 0.816586 7.49706e+07 0.00683111 1.66566e+07 2.55362e+07 1.64366e+07 239 1.643e+07 6.71316e+06 0.00576818 1.68903e+07 50.6907 0.052448 0.994526 0 49.6676 GTEX-11ZVC-0526-SM-5N9G1 0 B1 2 pieces; 50 and 30% external and internal fat 5.7 Heart Heart - Atrial Appendage 0006631 530 627 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.988659 292275 0.978937 0.99014 0.81719 22842 1 76 0.00385052 367 0 9.39488e+07 0.0209294 5.38377e+06 9.48844e+07 4.47956e+06 22862 4.6704e+07 0 0.161747 0.99014 0.809133 9.39488e+07 0.00392358 2.06811e+07 2.45636e+07 2.0774e+07 334 2.06139e+07 6.86898e+06 0.00388699 2.09692e+07 50.4273 0.0567403 0.991621 0 50.112 GTEX-11ZVC-0726-SM-5FQT9 1 B1 2 pieces; capsule present on one piece 6.2 Liver Liver 0001114 541 616 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.989094 304088 0.965855 0.99212 0.791806 21532 1 76 0.00219285 268 0 8.12239e+07 0.0339039 1.50831e+06 8.1869e+07 1.09258e+07 21550 4.03983e+07 0 0.174049 0.99212 0.785566 8.12239e+07 0.00355104 1.77386e+07 1.86976e+07 1.76473e+07 271 1.7629e+07 9.34683e+06 0.00286988 1.79723e+07 50.4822 0.0184235 0.995147 0 49.871 GTEX-11ZVC-1426-SM-5EGGA 1 B1 2 pieces; atrophic, corpora albicans, several small cysts 7.2 Ovary Ovary 0000992 553 604 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.981689 235590 0.964616 0.987482 0.730783 23730 1 76 0.00243275 151 0 7.44893e+07 0.0351088 175216 7.54335e+07 1.20662e+07 23770 3.69271e+07 0 0.233833 0.987482 0.721635 7.44893e+07 0.0058803 1.61461e+07 1.01939e+07 1.63519e+07 148 1.64935e+07 1.37622e+07 0.00414641 1.64153e+07 49.8813 0.00232279 0.993276 0 50.3166 GTEX-11ZVC-2126-SM-5EGJ1 3 B1 6 pieces; mucosa=3; muscularis=1; only muscle useful for GTEx 7 Colon Colon - Transverse 0001157 573 584 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.98928 282679 0.970553 0.992528 0.797638 24188 1 76 0.00185035 274 0 9.08453e+07 0.0291185 587957 9.15292e+07 8.47106e+06 24215 4.51625e+07 0 0.172914 0.992528 0.791678 9.08453e+07 0.0029361 1.94631e+07 8.59242e+06 1.96738e+07 265 1.9707e+07 1.56032e+07 0.00239145 1.97045e+07 49.9967 0.00642371 0.995775 0 50.2693 GTEX-11ZVC-2526-SM-5FQTE 0 B1 6 pieces; well trimmed 8.2 Skin Skin - Sun Exposed (Lower leg) 0004264 640 517 BP-43823 RNA Extraction from Paxgene-derived Lysate Plate Based 09/20/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.989636 185586 0.973737 0.992504 0.806874 23950 1 76 0.00233377 163 0 7.16471e+07 0.0259427 339357 7.21882e+07 1.00785e+07 23972 3.56405e+07 0 0.166863 0.992504 0.800826 7.16471e+07 0.00362539 1.5662e+07 7.51554e+06 1.56766e+07 165 1.57179e+07 1.32061e+07 0.00297772 1.58143e+07 50.1528 0.004701 0.995373 0 50.0233 GTEX-11ZVC-2626-SM-5FQTA 1 B1 2 pieces 6.3 Adipose Tissue Adipose - Subcutaneous 0002190 642 515 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.98838 255148 0.9721 0.991814 0.774452 23707 1 76 0.00239211 164 0 7.69834e+07 0.0275594 558742 7.76188e+07 9.9272e+06 23735 3.82651e+07 0 0.197648 0.991814 0.768112 7.69834e+07 0.00370582 1.69645e+07 9.11622e+06 1.69378e+07 192 1.69813e+07 1.19961e+07 0.00304669 1.71697e+07 50.2758 0.00719854 0.995247 0 49.9606 GTEX-11ZVC-2726-SM-5FQSZ 0 B1 2 pieces, but fragmented 8 Muscle Muscle - Skeletal 0011907 643 514 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.989265 291211 0.983079 0.992872 0.871223 21123 1 76 0.00191047 270 0 9.145e+07 0.0165263 1.09481e+06 9.21065e+07 1.41e+07 21132 4.54715e+07 0 0.111856 0.992872 0.865013 9.145e+07 0.00319478 1.93049e+07 1.18064e+07 1.91922e+07 257 1.92169e+07 2.01025e+07 0.00255029 1.95817e+07 50.4701 0.0118863 0.996479 0 49.8536 GTEX-11ZVC-2826-SM-5FQTC 0 B1 2 pieces; 10% internal fat 7.5 Nerve Nerve - Tibial 0001323 645 512 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.987632 261615 0.968065 0.991367 0.727855 24404 1 76 0.00235876 172 0 7.60342e+07 0.0316501 430672 7.66963e+07 1.16738e+07 24448 3.77722e+07 0 0.24021 0.991367 0.721572 7.60342e+07 0.00367784 1.67258e+07 7.79502e+06 1.68307e+07 166 1.68784e+07 1.12559e+07 0.00301582 1.6946e+07 50.1 0.00561529 0.995103 0 50.1564 GTEX-11ZVC-2926-SM-5986H 1 B1 2 pieces; well trimmed of fat; some perivascular stroma present [annotated] 7.6 Blood Vessel Artery - Tibial 0007610 647 510 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.985464 351478 0.967691 0.990203 0.806099 21806 1 76 0.00260719 138 0 7.07733e+07 0.0319385 575099 7.14735e+07 1.38103e+07 21823 3.51273e+07 0 0.161592 0.990203 0.798202 7.07733e+07 0.00631788 1.49939e+07 1.10745e+07 1.5104e+07 150 1.51744e+07 1.29016e+07 0.00445365 1.52311e+07 50.0933 0.00804632 0.994943 0 50.1829 GTEX-11ZVC-3026-SM-59HJM 1 B1 3 pieces 5.9 Brain Brain - Cerebellum 0002037 707 450 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4419 01/14/2014 TruSeq.v1 RNASEQ 0.977725 569593 0.942959 0.984827 0.74403 24609 1 76 0.00280747 267 0 9.23155e+07 0.0567956 3.00481e+06 9.37379e+07 1.93487e+07 24641 4.57022e+07 0 0.198929 0.984827 0.73274 9.23155e+07 0.0091359 1.97384e+07 2.65331e+07 1.98677e+07 278 1.99848e+07 8.25209e+06 0.00594887 2.01914e+07 50.2572 0.0320555 0.991928 0 50.1633 GTEX-11ZVC-3226-SM-5FQV1 1 B1 1 piece with anterior and posterior portions 6.3 Pituitary Pituitary 0000007 709 448 BP-43823 RNA Extraction from Paxgene-derived Lysate Plate Based 09/20/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.989444 509422 0.951275 0.992354 0.751006 25854 1 76 0.00234151 201 0 9.40181e+07 0.0485311 605243 9.47425e+07 1.27278e+07 25898 4.67479e+07 0 0.200269 0.992354 0.745264 9.40181e+07 0.00371093 1.70803e+07 2.15752e+07 1.73488e+07 249 1.73918e+07 1.47983e+07 0.00302421 1.72787e+07 49.8369 0.0063883 0.995264 0 50.39 GTEX-1211K-0001-SM-5S2P9 B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -66 BP-45438 RNA isolation_Trizol Manual (Cell Pellet) 11/04/2013 LCSET-4988 04/01/2014 TruSeq.v1 RNASEQ 0.991578 548725 0.962208 0.993223 0.828854 19554 1 76 0.00181004 129 0 5.61783e+07 0.0374312 416882 5.65616e+07 3.27674e+06 19566 2.79613e+07 0 0.133354 0.993223 0.823236 5.61783e+07 0.00258535 1.22908e+07 1.05804e+07 1.24245e+07 130 1.23848e+07 1.20584e+07 0.00219705 1.24365e+07 50.104 0.0073704 0.994867 0 50.2704 GTEX-1211K-0003-SM-58Q98 B1 Blood Whole Blood 0013756 -66 BP-40499 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/09/2013 LCSET-4574 01/20/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-1211K-0003-SM-5DWTL B1 Blood Whole Blood 0013756 -66 BP-40499 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/09/2013 GTEx_OM25_Dec_01 01/28/2014 Illumina OMNI SNP Array OMNI GTEX-1211K-0003-SM-7DRPU B1 Blood Whole Blood 0013756 -66 BP-40499 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/09/2013 LCSET-6341 01/12/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) EXCLUDE GTEX-1211K-0003-SM-CLTG2 B1 Blood Whole Blood 0013756 -66 BP-40499 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/09/2013 LCSET-9400 08/01/2016 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1211K-0006-SM-5MR53 B1 9.1 Blood Whole Blood 0013756 -66 BP-40739 RNA isolation_PAXgene Blood RNA (Manual) 07/12/2013 LCSET-4902 03/22/2014 TruSeq.v1 RNASEQ 0.992936 599477 0.962191 0.993435 0.80138 18211 1 76 0.00293368 154 0 8.57279e+07 0.0373064 249159 8.62944e+07 3.35938e+06 18225 4.27347e+07 0 0.160811 0.993435 0.796119 8.57279e+07 0.0029595 1.89066e+07 4.55947e+07 1.90687e+07 175 1.90706e+07 1.80026e+07 0.00294658 1.89571e+07 49.8507 0.00288731 0.993934 0 50.2134 GTEX-1211K-0008-SM-5S2W1 B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 145 BP-45532 RNA isolation_Trizol Manual (Cell Pellet) 11/06/2013 LCSET-4996 04/03/2014 TruSeq.v1 RNASEQ 0.992609 367256 0.976977 0.99475 0.868375 19936 1 76 0.00159812 139 0 6.28697e+07 0.0227561 312922 6.32015e+07 6.13358e+06 19952 3.13033e+07 0 0.108602 0.99475 0.863816 6.28697e+07 0.00258567 1.39522e+07 9.25134e+06 1.40801e+07 145 1.40654e+07 1.49768e+07 0.00209084 1.41055e+07 50.0712 0.00495118 0.99689 0 50.2281 GTEX-1211K-0126-SM-59HJE 1 B1 2 pieces: sample blindly with care: one aliquot is ~20% cortex (delineated), rest fat; other is 90% cortex, well preserved 9.3 Adrenal Gland Adrenal Gland 0002369 72 484 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4419 01/14/2014 TruSeq.v1 RNASEQ 0.98419 352272 0.977667 0.989964 0.830288 23898 1 76 0.00235085 270 0 9.71138e+07 0.0218912 1.25978e+06 9.80983e+07 1.82705e+07 23917 4.8163e+07 0 0.147379 0.989964 0.821956 9.71138e+07 0.00841147 2.13981e+07 1.68428e+07 2.12756e+07 287 2.13896e+07 1.62984e+07 0.00536349 2.17383e+07 50.4043 0.012842 0.995738 0 49.8565 GTEX-1211K-0226-SM-59HJY 1 B1 2 pieces, no abnormalities 8.6 Heart Heart - Atrial Appendage 0006631 66 490 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4419 01/14/2014 TruSeq.v1 RNASEQ 0.983539 267050 0.979848 0.989576 0.845673 21807 1 76 0.00223742 196 0 8.42717e+07 0.0195726 1.69778e+06 8.51593e+07 1.64768e+07 21825 4.17859e+07 0 0.134175 0.989576 0.836858 8.42717e+07 0.00836447 1.81067e+07 1.71049e+07 1.79042e+07 248 1.79188e+07 1.36429e+07 0.00528225 1.84698e+07 50.7571 0.0199366 0.995614 0 49.7189 GTEX-1211K-0326-SM-5FQT1 1 B1 6 pieces, minimal atherosis 7.5 Blood Vessel Artery - Aorta 0001496 68 488 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.990694 204226 0.978567 0.993583 0.86521 22006 1 76 0.00200188 206 0 7.98902e+07 0.0210734 277337 8.04062e+07 1.10606e+07 22016 3.97453e+07 0 0.113357 0.993583 0.859658 7.98902e+07 0.00329827 1.7385e+07 6.8535e+06 1.74949e+07 223 1.74786e+07 1.63533e+07 0.00264819 1.7621e+07 50.2028 0.0034492 0.996471 0 50.1575 GTEX-1211K-0426-SM-5FQTP 1 B1 2 pieces, no abnormalities 7.7 Spleen Spleen 0002106 72 484 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.988893 294351 0.961324 0.992022 0.749355 26217 1 76 0.00248789 200 0 8.51898e+07 0.0379828 313475 8.5875e+07 1.14339e+07 26254 4.23389e+07 0 0.211969 0.992022 0.743377 8.51898e+07 0.00381883 1.8613e+07 1.03542e+07 1.87465e+07 203 1.87933e+07 1.27005e+07 0.00315126 1.88159e+07 50.03 0.00365037 0.99515 0 50.1786 GTEX-1211K-0626-SM-5FQUZ 1 B1 2 pieces, minimal ischemic damage 8.5 Heart Heart - Left Ventricle 0006566 84 472 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.991187 242617 0.984499 0.99367 0.863763 20302 1 76 0.00184737 270 0 8.26915e+07 0.01524 1.3812e+06 8.32183e+07 1.09449e+07 20312 4.11693e+07 0 0.120736 0.99367 0.858295 8.26915e+07 0.00303751 1.83946e+07 1.83686e+07 1.80784e+07 267 1.79915e+07 1.39476e+07 0.00244095 1.8669e+07 50.924 0.0165973 0.996153 0 49.5665 GTEX-1211K-0726-SM-5FQUW 1 B1 2 pieces, few small lymphoid aggregates, not sufficient for Hashimotos, but may be early stage condition. 7 Thyroid Thyroid 0002046 87 469 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.989728 198116 0.967365 0.992628 0.764664 23374 1 76 0.00213238 133 0 7.17886e+07 0.0323522 346145 7.23218e+07 1.01466e+07 23410 3.57172e+07 0 0.202701 0.992628 0.759027 7.17886e+07 0.00339086 1.57119e+07 7.30536e+06 1.57533e+07 160 1.5759e+07 1.17182e+07 0.00275978 1.58979e+07 50.2193 0.00478618 0.995527 0 50.0657 GTEX-1211K-0826-SM-5FQUP 1 B1 2 pieces, mild congestion 8.2 Lung Lung 0008952 92 464 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.988711 254241 0.977922 0.992377 0.831495 23354 1 76 0.00217508 206 0 8.11951e+07 0.0216506 265064 8.18187e+07 1.25258e+07 23376 4.03565e+07 0 0.146427 0.992377 0.825157 8.11951e+07 0.0035433 1.79644e+07 7.3776e+06 1.81053e+07 209 1.81553e+07 1.58489e+07 0.00285666 1.81975e+07 50.0581 0.00323965 0.996044 0 50.1952 GTEX-1211K-0926-SM-5FQTL 1 B1 6 pieces, squamous mucosa is ~10% thickness 9.4 Esophagus Esophagus - Mucosa 0006920 98 458 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.988536 189405 0.977121 0.991682 0.833482 22314 1 76 0.00223719 141 0 6.67661e+07 0.0225038 283309 6.73261e+07 9.87374e+06 22333 3.32095e+07 0 0.143638 0.991682 0.826549 6.67661e+07 0.00361481 1.49775e+07 9.04264e+06 1.50296e+07 151 1.5072e+07 1.37254e+07 0.00292381 1.5136e+07 50.1059 0.00420801 0.994828 0 50.0868 GTEX-1211K-1026-SM-5EQ4B 1 B1 6 pieces, all muscularis 7.6 Esophagus Esophagus - Muscularis 0004648 101 455 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.992381 213795 0.978438 0.994577 0.84541 21524 1 76 0.00173494 208 0 7.70788e+07 0.0212966 822535 7.74991e+07 8.83264e+06 21538 3.83775e+07 0 0.133028 0.994577 0.840826 7.70788e+07 0.00265558 1.673e+07 1.00151e+07 1.68353e+07 244 1.67785e+07 1.34622e+07 0.00219424 1.69519e+07 50.2571 0.0106135 0.996773 0 50.1569 GTEX-1211K-1126-SM-5EGGB 1 B1 2 pieces ~20% interstitial fat delineated; Islets well-visualized, rep encircled 7.3 Pancreas Pancreas 0001150 105 451 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.98534 207902 0.972733 0.989962 0.852353 20595 1 76 0.00245909 95 0 5.95331e+07 0.0270419 134839 6.01368e+07 9.49311e+06 20605 2.95597e+07 0 0.12038 0.989962 0.843797 5.95331e+07 0.00561215 1.35058e+07 1.44097e+07 1.36733e+07 100 1.36835e+07 1.68332e+07 0.00402826 1.37687e+07 50.1552 0.00224221 0.994584 0 50.3082 GTEX-1211K-1226-SM-5EQ4N 1 B1 2 pieces, minimal fibrosis 8.1 Adipose Tissue Adipose - Visceral (Omentum) 0010414 107 449 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.991459 260325 0.97887 0.99372 0.843665 22414 1 76 0.00177076 275 0 8.61739e+07 0.0208334 447016 8.67185e+07 1.06498e+07 22432 4.2902e+07 0 0.135206 0.99372 0.838367 8.61739e+07 0.00261323 1.8976e+07 1.22221e+07 1.91124e+07 260 1.90502e+07 1.60792e+07 0.00219103 1.92242e+07 50.2272 0.0051548 0.995981 0 50.179 GTEX-1211K-1326-SM-5FQV2 1 B1 6 pieces, all muscularis 7.6 Esophagus Esophagus - Gastroesophageal Junction 0004550 110 446 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.991404 223729 0.977847 0.993904 0.857726 21459 1 76 0.00197498 276 0 9.03697e+07 0.0219399 1.33972e+06 9.0924e+07 1.13783e+07 21475 4.49775e+07 0 0.120121 0.993904 0.852497 9.03697e+07 0.00324126 1.94381e+07 1.04334e+07 1.95835e+07 311 1.9427e+07 1.41339e+07 0.00260652 1.9798e+07 50.4728 0.0147345 0.996404 0 50.1864 GTEX-1211K-1426-SM-5FQTF 1 B1 6 pieces, fairly well preserved mucosa, ~10-15% thickness, superficial areas approach 'score 2' focally 8.2 Stomach Stomach 0000945 115 441 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.988501 377666 0.976607 0.992356 0.840514 24517 1 76 0.00205289 289 0 1.27968e+08 0.0230887 767190 1.28954e+08 2.01061e+07 24542 6.361e+07 0 0.136093 0.992356 0.834089 1.27968e+08 0.00332473 2.77713e+07 1.42469e+07 2.79965e+07 324 2.80166e+07 2.41389e+07 0.00268634 2.82073e+07 50.1696 0.00594935 0.99621 0 50.2019 GTEX-1211K-1526-SM-5FQU4 0 B1 6 pieces, minimal dermal fat, squamous epithelium is ~50 microns 7.7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 117 439 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.989838 161955 0.972885 0.992615 0.810621 23150 1 76 0.00215993 157 0 6.30733e+07 0.0268829 518102 6.35425e+07 8.50408e+06 23172 3.13871e+07 0 0.162264 0.992615 0.804635 6.30733e+07 0.00350454 1.39297e+07 7.45051e+06 1.39537e+07 153 1.39546e+07 1.06543e+07 0.00283036 1.40954e+07 50.251 0.00815363 0.995393 0 50.0429 GTEX-1211K-1726-SM-5FQUJ 1 B1 6 pieces, well preserved mucosa 6.9 Colon Colon - Transverse 0001157 131 425 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.988945 164806 0.972139 0.99211 0.78931 22578 1 76 0.00227375 133 0 6.03914e+07 0.0271741 1.16416e+06 6.08717e+07 8.5267e+06 22600 3.00226e+07 0 0.182829 0.99211 0.783082 6.03914e+07 0.0035108 1.35066e+07 1.1392e+07 1.32549e+07 159 1.32406e+07 6.97284e+06 0.0028903 1.36976e+07 50.8482 0.0191248 0.995275 0 49.5299 GTEX-1211K-1826-SM-5EGJ2 1 B1 6 pieces, all muscularis/adherent fat/serosa, rep delineated 7.8 Colon Colon - Sigmoid 0001159 135 421 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.991261 294225 0.976652 0.993803 0.831703 22657 1 76 0.00166993 203 0 7.54527e+07 0.0230594 519089 7.59232e+07 6.61368e+06 22677 3.75458e+07 0 0.144949 0.993803 0.826549 7.54527e+07 0.00273109 1.63446e+07 8.66764e+06 1.65306e+07 214 1.65081e+07 1.29556e+07 0.00219916 1.65441e+07 50.0544 0.00683703 0.996345 0 50.2829 GTEX-1211K-1926-SM-5EQLB 1 B1 2 pieces, mild fibrocystic change, rep ductal cysts delineated 7.8 Breast Breast - Mammary Tissue 0008367 140 416 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.992679 168757 0.975622 0.99422 0.814978 23643 1 76 0.00198943 168 0 7.39445e+07 0.0237893 223931 7.43744e+07 9.53442e+06 23670 3.68275e+07 0 0.160643 0.99422 0.810267 7.39445e+07 0.00286811 1.63395e+07 7.58253e+06 1.64305e+07 177 1.64017e+07 1.42444e+07 0.00242809 1.6478e+07 50.116 0.00301086 0.99576 0 50.1388 GTEX-1211K-2026-SM-5EQ4Z 0 B1 6 pieces, minimal dermal fat; squamous epithelium is ~40 microns 7.5 Skin Skin - Sun Exposed (Lower leg) 0004264 145 411 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.975802 244746 0.977196 0.978415 0.84525 21937 1 76 0.00190611 174 0 6.26296e+07 0.0225618 452897 6.40113e+07 7.68948e+06 21955 3.11426e+07 0 0.131946 0.978415 0.827006 6.26296e+07 0.0033302 1.37723e+07 6.9371e+06 1.38797e+07 163 1.38393e+07 1.1202e+07 0.00261625 1.39726e+07 50.2396 0.00707526 0.981028 0 50.1943 GTEX-1211K-2126-SM-59HJZ 0 B1 2 pieces, ~10% interstitial fat, rep delineated 8.6 Muscle Muscle - Skeletal 0011907 147 409 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4419 01/14/2014 TruSeq.v1 RNASEQ 0.982999 287990 0.98384 0.989626 0.879927 19612 1 76 0.00213146 140 0 6.93501e+07 0.0159119 386251 7.00771e+07 1.31913e+07 19617 3.43763e+07 0 0.103913 0.989626 0.870798 6.93501e+07 0.00851484 1.51082e+07 8.75152e+06 1.51239e+07 159 1.52515e+07 1.44853e+07 0.00530177 1.53919e+07 50.229 0.0055118 0.996252 0 50.0259 GTEX-1211K-2226-SM-5FQU6 0 B1 2 pieces, ~40% intermingled fascia/fibrous tissue, delineated 8.6 Adipose Tissue Adipose - Subcutaneous 0002190 148 408 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.990836 199141 0.976913 0.993209 0.816335 21929 1 76 0.00205267 142 0 6.47935e+07 0.0227338 160365 6.52365e+07 8.68991e+06 21946 3.22533e+07 0 0.160578 0.993209 0.810792 6.47935e+07 0.00318609 1.42887e+07 6.00615e+06 1.43241e+07 150 1.43357e+07 1.22599e+07 0.00261802 1.44215e+07 50.1491 0.00245821 0.995584 0 50.0618 GTEX-1211K-2326-SM-5FQU7 0 B1 2 pieces clean, minute nubbin of fat, delineated 8 Nerve Nerve - Tibial 0001323 151 405 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.98767 241775 0.971804 0.991638 0.783802 23474 1 76 0.00218018 182 0 7.57696e+07 0.0278827 208650 7.64085e+07 1.16551e+07 23504 3.76532e+07 0 0.188003 0.991638 0.777247 7.57696e+07 0.00350856 1.67171e+07 7.2481e+06 1.67746e+07 181 1.6855e+07 1.32501e+07 0.00284171 1.692e+07 50.0963 0.00273072 0.995606 0 50.0858 GTEX-1211K-2426-SM-59HL8 0 B1 2 pieces, minimal circumferential fibrous tissue up to ~0.3mm, good specimens 7.6 Blood Vessel Artery - Tibial 0007610 152 404 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4419 01/14/2014 TruSeq.v1 RNASEQ 0.978875 419040 0.973522 0.985917 0.832716 23696 1 76 0.00235975 381 0 1.35857e+08 0.0260757 841592 1.37798e+08 2.91797e+07 23730 6.72701e+07 0 0.140806 0.985917 0.820989 1.35857e+08 0.00867866 2.91645e+07 1.28102e+07 2.94271e+07 337 2.96863e+07 2.47887e+07 0.00549664 2.97781e+07 50.0772 0.00610745 0.992958 0 50.2241 GTEX-1211K-5001-SM-AN3X5 B1 Heart Heart - Left Ventricle 0006566 85 ChIP-Seq GTEX-1211K-5019-SM-AN3X7 B1 Muscle Muscle - Skeletal 0011907 146 ChIP-Seq GTEX-12126-0001-SM-58Q8L C1 Blood Whole Blood 0013756 803 BP-40502 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/09/2013 LCSET-4574 01/20/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-12126-0001-SM-5DWTE C1 Blood Whole Blood 0013756 803 BP-40502 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/09/2013 GTEx_OM25_Dec_01 01/29/2014 Illumina OMNI SNP Array OMNI GTEX-12126-0001-SM-6WBU6 C1 Blood Whole Blood 0013756 803 BP-40502 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/09/2013 LCSET-6056 09/22/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-12126-0006-SM-5O9B8 C1 7.2 Blood Whole Blood 0013756 803 BP-40739 RNA isolation_PAXgene Blood RNA (Manual) 07/12/2013 LCSET-4909 03/20/2014 TruSeq.v1 RNASEQ 0.982545 786946 0.960479 0.986408 0.75099 19876 1 76 0.00275886 124 0 8.22988e+07 0.0386982 176702 8.34328e+07 1.13431e+07 19893 4.08307e+07 0 0.209489 0.986408 0.740783 8.22988e+07 0.00521706 1.85335e+07 1.01199e+08 1.87194e+07 130 1.87478e+07 1.82987e+07 0.00398315 1.88644e+07 50.155 0.0021179 0.990271 0 50.2495 GTEX-12126-0008-SM-5S2UC C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 928 BP-45532 RNA isolation_Trizol Manual (Cell Pellet) 11/06/2013 LCSET-4996 04/03/2014 TruSeq.v1 RNASEQ 0.992878 519320 0.975511 0.99489 0.866595 21470 1 76 0.00182456 284 0 1.16851e+08 0.0241931 450304 1.17452e+08 1.16748e+07 21488 5.82094e+07 0 0.108917 0.99489 0.862167 1.16851e+08 0.00271716 2.59379e+07 1.92574e+07 2.61303e+07 311 2.61434e+07 2.82448e+07 0.00226996 2.61603e+07 50.0161 0.00383395 0.996903 0 50.1847 GTEX-12126-0011-R10b-SM-5BC6T C1, A1 8 Brain Brain - Frontal Cortex (BA9) 0009834 825 BP-43234 RNA isolation_PAXgene Tissue miRNA 09/06/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.986789 603787 0.962003 0.991621 0.847746 22612 1 76 0.00329166 151 0 7.07894e+07 0.0374982 4.14979e+06 7.13876e+07 1.88023e+07 22621 3.51347e+07 0 0.114256 0.991621 0.840643 7.07894e+07 0.00553495 1.54986e+07 2.1355e+07 1.52389e+07 201 1.52782e+07 8.11052e+06 0.00440784 1.57605e+07 50.777 0.0581304 0.996454 0 49.5775 GTEX-12126-0011-R11a-SM-5BC6X C1, A1 8.5 Brain Brain - Cerebellar Hemisphere 0002037 825 BP-43234 RNA isolation_PAXgene Tissue miRNA 09/06/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.984946 545425 0.948885 0.990158 0.776268 23008 1 76 0.00310055 129 0 6.82091e+07 0.0506296 1.30224e+06 6.88871e+07 2.04027e+07 23027 3.38301e+07 0 0.172617 0.990158 0.768628 6.82091e+07 0.00566164 1.46239e+07 1.38849e+07 1.47627e+07 156 1.48757e+07 8.95437e+06 0.00437436 1.48435e+07 49.9459 0.018904 0.995369 0 50.2361 GTEX-12126-0011-R9b-SM-5BC6P C1, A1 8.5 Brain Brain - Spinal cord (cervical c-1) 0006469 825 BP-43234 RNA isolation_PAXgene Tissue miRNA 09/06/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.988081 703888 0.95464 0.992352 0.831051 23113 1 76 0.00301565 220 0 7.62167e+07 0.0449574 2.14965e+06 7.6804e+07 2.06322e+07 23128 3.78498e+07 0 0.123589 0.992352 0.824696 7.62167e+07 0.00513027 1.6696e+07 1.72641e+07 1.69227e+07 205 1.68362e+07 1.08112e+07 0.00406841 1.71024e+07 50.3922 0.0279888 0.996624 0 50.3373 GTEX-12126-0326-SM-5PNW3 1 C1 6 pieces; well trimmed, but with 10% intradermal fat 6.4 Skin Skin - Sun Exposed (Lower leg) 0004264 927 957 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.987866 186983 0.973391 0.989831 0.828091 22742 1 76 0.00250363 162 0 6.79139e+07 0.026417 659295 6.86116e+07 6.20382e+06 22764 3.38091e+07 0 0.1453 0.989831 0.81967 6.79139e+07 0.00365313 1.48384e+07 1.01599e+07 1.49720e+07 169 1.49193e+07 1.05454e+07 0.00307724 1.50119e+07 50.1546 0.00960909 0.991796 0 50.2242 GTEX-12126-0426-SM-5Q5AP 0 C1 2 pieces; scattered tissue holes 6.6 Adipose Tissue Adipose - Subcutaneous 0002190 930 955 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.989534 194227 0.975319 0.992214 0.817781 22231 1 76 0.00210063 149 0 6.4316e+07 0.0243511 274158 6.48207e+07 4.87687e+06 22245 3.19694e+07 0 0.157538 0.992214 0.811414 6.4316e+07 0.00321766 1.41235e+07 6.4634e+06 1.42065e+07 154 1.41934e+07 1.13109e+07 0.00265764 1.43018e+07 50.1903 0.00422948 0.994894 0 50.1464 GTEX-12126-0526-SM-5PNW4 0 C1 2 pieces 8.2 Muscle Muscle - Skeletal 0011907 935 950 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.992553 197609 0.98579 0.99429 0.890169 18557 1 76 0.00198423 127 0 7.44173e+07 0.0139819 582977 7.48447e+07 6.91217e+06 18559 3.70841e+07 0 0.0956209 0.99429 0.885086 7.44173e+07 0.0029103 1.6187e+07 6.94609e+06 1.61675e+07 161 1.62007e+07 1.77841e+07 0.00244646 1.62724e+07 50.1103 0.00778916 0.996027 0 49.9699 GTEX-12126-0526-SM-CYKNY 0 C1 2 pieces 8.2 Muscle Muscle - Skeletal 0011907 935 950 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 RIP-Seq GTEX-12126-0626-SM-5Q5AQ 0 C1 2 pieces; 20% external and internal fat 5.8 Nerve Nerve - Tibial 0001323 940 946 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.98734 200481 0.965366 0.989864 0.733692 23291 1 76 0.00221473 129 0 5.87143e+07 0.0343834 276843 5.93154e+07 4.44552e+06 23318 2.91676e+07 0 0.231674 0.989864 0.726256 5.87143e+07 0.00355647 1.28674e+07 5.8802e+06 1.29684e+07 136 1.29367e+07 8.19739e+06 0.00288389 1.30427e+07 50.2039 0.0046673 0.992389 0 50.1954 GTEX-12126-0726-SM-5FQTX 0 C1 2 pieces; excellent normal 8.3 Blood Vessel Artery - Tibial 0007610 942 944 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.990149 231627 0.976289 0.993247 0.873713 19477 1 76 0.00219824 140 0 6.81744e+07 0.0233189 214732 6.86379e+07 1.06238e+07 19482 3.39014e+07 0 0.102576 0.993247 0.867813 6.81744e+07 0.0036048 1.4335e+07 5.1486e+06 1.44383e+07 155 1.44145e+07 1.46504e+07 0.00289933 1.4557e+07 50.2459 0.00312848 0.996346 0 50.1794 GTEX-12126-0826-SM-5FQTZ 1 C1 6 pieces; well trimmed; 3 pieces have 10% intradermal fat, 3 have no measurable fat 7.5 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 955 932 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.987268 284434 0.9766 0.991247 0.822856 22973 1 76 0.00254854 165 0 6.76995e+07 0.0231355 326620 6.82973e+07 9.32795e+06 22994 3.36099e+07 0 0.153744 0.991247 0.815653 6.76995e+07 0.00440749 1.48353e+07 8.6037e+06 1.48699e+07 156 1.49193e+07 1.22264e+07 0.00347429 1.5045e+07 50.2097 0.00478233 0.995225 0 50.0582 GTEX-12126-0926-SM-5FQTW 0 C1 4 pieces 7 Brain Brain - Cerebellum 0002037 996 891 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.987682 381743 0.94607 0.99111 0.717608 23806 1 76 0.00280706 155 0 7.84545e+07 0.0535697 1.15743e+06 7.91582e+07 1.20504e+07 23835 3.89831e+07 0 0.228461 0.99111 0.711229 7.84545e+07 0.00401787 1.68852e+07 1.51394e+07 1.7027e+07 181 1.71005e+07 9.37054e+06 0.00341037 1.70571e+07 49.9366 0.0146217 0.994538 0 50.2091 GTEX-12126-1026-SM-5P9JJ 0 C1 4 pieces 6.9 Brain Brain - Cortex 0001870 998 890 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4916 03/27/2014 TruSeq.v1 RNASEQ 0.993004 649690 0.955477 0.993438 0.819355 24367 1 76 0.00376087 269 0 1.06424e+08 0.0441267 4.08786e+06 1.07127e+08 3.49014e+06 24387 5.30297e+07 0 0.136123 0.993438 0.813978 1.06424e+08 0.00397185 2.29941e+07 3.35357e+07 2.31483e+07 299 2.29918e+07 1.25262e+07 0.00386631 2.31958e+07 50.2208 0.038159 0.993873 0 50.1671 GTEX-12126-1026-SM-CYKSE 0 C1 4 pieces 6.9 Brain Brain - Cortex 0001870 998 890 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 RIP-Seq GTEX-12126-1126-SM-5P9GP 2 C1 1 piece; up to 2 mm adherent stroma and vessels 6.7 Pituitary Pituitary 0000007 999 889 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4914 03/27/2014 TruSeq.v1 RNASEQ 0.991607 803048 0.948635 0.992092 0.768983 26421 1 76 0.00326958 375 0 1.30181e+08 0.0510991 1.25148e+06 1.31218e+08 4.23587e+06 26468 6.4833e+07 0 0.179652 0.992092 0.762902 1.30181e+08 0.00392929 2.69098e+07 3.76765e+07 2.73059e+07 335 2.72447e+07 1.85727e+07 0.00359927 2.70429e+07 49.8141 0.00953739 0.992578 0 50.3653 GTEX-1212Z-0002-SM-5SI6W B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 478 BP-45438 RNA isolation_Trizol Manual (Cell Pellet) 11/04/2013 LCSET-4995 04/05/2014 TruSeq.v1 RNASEQ 0.988639 594128 0.969562 0.991581 0.838901 21055 1 76 0.00218819 216 0 9.36014e+07 0.0294094 566321 9.43961e+07 9.39534e+06 21075 4.65319e+07 0 0.130661 0.991581 0.831838 9.36014e+07 0.00321267 2.07973e+07 1.65909e+07 2.08742e+07 251 2.09507e+07 2.16081e+07 0.00269891 2.09962e+07 50.0543 0.00599941 0.994523 0 50.0922 GTEX-1212Z-0004-SM-58Q8P B1 Blood Whole Blood 0013756 478 BP-40502 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/09/2013 LCSET-4574 01/20/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-1212Z-0004-SM-5DWTI B1 Blood Whole Blood 0013756 478 BP-40502 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/09/2013 GTEx_OM25_Dec_01 01/29/2014 Illumina OMNI SNP Array OMNI GTEX-1212Z-0004-SM-7DRQE B1 Blood Whole Blood 0013756 478 BP-40502 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/09/2013 LCSET-6341 01/18/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-1212Z-0006-SM-5NQ8M B1 8.6 Blood Whole Blood 0013756 478 BP-40739 RNA isolation_PAXgene Blood RNA (Manual) 07/12/2013 LCSET-4906 03/22/2014 TruSeq.v1 RNASEQ 0.980252 196108 0.987162 0.982085 0.809783 18000 1 76 0.00226475 101 0 7.36547e+07 0.0120701 163439 7.49983e+07 6.26431e+06 18005 3.66686e+07 0 0.177379 0.982085 0.795276 7.36547e+07 0.00324889 1.73625e+07 9.60788e+07 1.76067e+07 128 1.76318e+07 1.97025e+07 0.0027559 1.74836e+07 49.789 0.00217923 0.983917 0 50.349 GTEX-1212Z-0008-SM-5TDBW B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 757 BP-45532 RNA isolation_Trizol Manual (Cell Pellet) 11/06/2013 LCSET-5048 04/03/2014 TruSeq.v1 RNASEQ 0.989057 511565 0.977504 0.992086 0.877285 20988 1 76 0.00192972 210 0 8.96845e+07 0.0222201 453785 9.03999e+07 1.0841e+07 20999 4.46088e+07 0 0.100219 0.992086 0.870342 8.96845e+07 0.0036069 2.01153e+07 1.47149e+07 2.02072e+07 228 2.02527e+07 2.26492e+07 0.00276575 2.0345e+07 50.1137 0.00501975 0.995115 0 50.1139 GTEX-1212Z-0011-R1b-SM-5BC72 B1, A1 7.2 Brain Brain - Hippocampus 0001954 537 BP-43234 RNA isolation_PAXgene Tissue miRNA 09/06/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.98649 383478 0.964201 0.991456 0.819968 22050 1 76 0.00251169 145 0 5.67229e+07 0.0355891 5.18887e+06 5.72117e+07 1.48443e+07 22064 2.81493e+07 0 0.144233 0.991456 0.812962 5.67229e+07 0.00517979 1.26124e+07 1.77631e+07 1.2297e+07 177 1.21855e+07 4.47237e+06 0.00383906 1.29817e+07 51.582 0.090696 0.996423 0 49.367 GTEX-1212Z-0126-SM-59HK4 1 B1 6 pieces, well trimmed 6.4 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 602 1160 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4419 01/14/2014 TruSeq.v1 RNASEQ 0.980804 295694 0.967413 0.987273 0.75551 25302 1 76 0.0025439 213 0 9.03923e+07 0.0323849 635270 9.15576e+07 1.86154e+07 25333 4.47941e+07 0 0.211904 0.987273 0.745894 9.03923e+07 0.00855496 1.97128e+07 1.19926e+07 1.97727e+07 218 1.99469e+07 1.29818e+07 0.00552974 2.00747e+07 50.1596 0.00693848 0.993741 0 50.0759 GTEX-1212Z-0226-SM-59HLF 1 B1 2 pieces, mild steatosis 6.4 Liver Liver 0001114 604 1158 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4419 01/14/2014 TruSeq.v1 RNASEQ 0.984364 245032 0.979155 0.989994 0.809875 20936 1 76 0.00238556 115 0 6.35911e+07 0.0206795 824389 6.42338e+07 1.13299e+07 20953 3.1543e+07 0 0.169279 0.989994 0.801772 6.35911e+07 0.00815806 1.38139e+07 9.21524e+06 1.37468e+07 139 1.38489e+07 1.08379e+07 0.00525539 1.40314e+07 50.3272 0.0128342 0.995624 0 49.8783 GTEX-1212Z-0326-SM-5FQSJ 1 B1 2 pieces, spermatogenesis is present, increased peritubular fibrosis and rare hyalinized tubule 6.7 Testis Testis 0000473 608 1154 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.988556 376800 0.924435 0.991436 0.716115 33895 1 76 0.00224764 217 0 8.85211e+07 0.0752312 844836 8.92857e+07 1.17697e+07 33965 4.40334e+07 0 0.20832 0.991436 0.709982 8.85211e+07 0.00334939 1.83365e+07 1.3471e+07 1.83108e+07 210 1.83925e+07 1.40272e+07 0.00279691 1.84855e+07 50.1262 0.00946216 0.994315 0 49.9649 GTEX-1212Z-0426-SM-5FQT6 2 B1 2 pieces, regressive changes 6.9 Thyroid Thyroid 0002046 609 1153 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.989302 236831 0.969265 0.992286 0.714236 25353 1 76 0.00229617 134 0 7.32255e+07 0.030447 387434 7.37947e+07 9.94419e+06 25392 3.64115e+07 0 0.255029 0.992286 0.708727 7.32255e+07 0.0036691 1.60549e+07 7.65784e+06 1.61493e+07 153 1.6192e+07 1.05066e+07 0.00298057 1.62154e+07 50.0361 0.00525016 0.99527 0 50.1465 GTEX-1212Z-0526-SM-5FQSQ 0 B1 2 pieces 6.8 Adipose Tissue Adipose - Visceral (Omentum) 0010414 612 1150 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.987411 225280 0.979278 0.990817 0.850205 23045 1 76 0.00218146 174 0 7.6279e+07 0.0203942 572497 7.69859e+07 1.03751e+07 23060 3.79141e+07 0 0.129074 0.990817 0.842397 7.6279e+07 0.00389126 1.67644e+07 9.83439e+06 1.68371e+07 188 1.68385e+07 1.50173e+07 0.00303342 1.70176e+07 50.2645 0.00743638 0.994224 0 50.1082 GTEX-1212Z-0626-SM-5FQTB 1 B1 2 pieces, 1mmx2mm area of scar, mild interstitial fibrosis 6.9 Heart Heart - Left Ventricle 0006566 621 1141 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.988524 198923 0.984406 0.992082 0.84049 20550 1 76 0.00197579 265 0 7.50346e+07 0.01547 3.24742e+06 7.56335e+07 1.12152e+07 20558 3.73131e+07 0 0.143916 0.992082 0.833835 7.50346e+07 0.00336312 1.67178e+07 2.30567e+07 1.64855e+07 283 1.6433e+07 7.3383e+06 0.00266697 1.69864e+07 50.8279 0.0429363 0.99564 0 49.6502 GTEX-1212Z-0726-SM-5EGI5 1 B1 2 pieces, increased interstitial fibrosis 6.9 Heart Heart - Atrial Appendage 0006631 624 1138 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.982836 177266 0.981077 0.988893 0.831667 21097 1 76 0.002208 195 0 6.92432e+07 0.0187468 2.39197e+06 7.0021e+07 1.10393e+07 21108 3.43428e+07 0 0.14941 0.988893 0.82243 6.92432e+07 0.00562535 1.4855e+07 1.48704e+07 1.46169e+07 213 1.46706e+07 8.39824e+06 0.00390621 1.51411e+07 50.7892 0.0341607 0.994949 0 49.5961 GTEX-1212Z-0826-SM-5EQ51 1 B1 6 pieces, minimal plaque 6.4 Blood Vessel Artery - Aorta 0001496 626 1136 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.990547 271090 0.975975 0.992906 0.788045 22306 1 76 0.0020988 165 0 7.99429e+07 0.0235782 325254 8.0514e+07 9.91725e+06 22325 3.97519e+07 0 0.187929 0.992906 0.782455 7.99429e+07 0.0031035 1.72673e+07 7.659e+06 1.74806e+07 189 1.74935e+07 1.39973e+07 0.00259996 1.74351e+07 49.9164 0.00403972 0.995266 0 50.3068 GTEX-1212Z-1026-SM-5EGJ8 1 B1 2 pieces, congested, numerous hemosiderin-laden macrophages (heart failure cells) 6.2 Lung Lung 0008952 636 1126 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.988705 321491 0.973053 0.991866 0.727954 23405 1 76 0.00205063 134 0 6.915e+07 0.026643 426699 6.97171e+07 5.58249e+06 23432 3.43556e+07 0 0.245099 0.991866 0.722033 6.915e+07 0.00329334 1.52277e+07 6.59887e+06 1.53654e+07 155 1.53818e+07 9.56868e+06 0.00267001 1.54181e+07 50.0589 0.00612044 0.995026 0 50.2249 GTEX-1212Z-1826-SM-5FQSH 1 B1 6 pieces, well trimmed 6.2 Colon Colon - Sigmoid 0001159 652 1110 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.989569 288615 0.968573 0.992644 0.789656 23833 1 76 0.0022593 203 0 8.54578e+07 0.0312217 1.01592e+06 8.6091e+07 1.0881e+07 23853 4.24818e+07 0 0.178916 0.992644 0.783848 8.54578e+07 0.00388467 1.83341e+07 9.07509e+06 1.84297e+07 226 1.84121e+07 1.22581e+07 0.00306947 1.85964e+07 50.2489 0.0118006 0.99572 0 50.1301 GTEX-1212Z-2026-SM-5N9EA 2 B1 6 pieces, well trimmed 5.7 Esophagus Esophagus - Muscularis 0004648 661 1101 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.988605 296701 0.972807 0.9898 0.83589 22935 1 76 0.00393281 272 0 9.96237e+07 0.0269897 1.69536e+06 1.0065e+08 4.57409e+06 22959 4.95077e+07 0 0.136917 0.9898 0.827364 9.96237e+07 0.00404955 2.13434e+07 1.01243e+07 2.14737e+07 319 2.13426e+07 1.54604e+07 0.00399111 2.15877e+07 50.2855 0.0168441 0.990995 0 50.1521 GTEX-1212Z-2126-SM-5FQTM 1 B1 6 pieces 6.8 Esophagus Esophagus - Mucosa 0006920 662 1100 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.988325 296391 0.975601 0.991911 0.799247 22638 1 76 0.00220572 154 0 7.38767e+07 0.0241468 664193 7.44792e+07 1.0409e+07 22659 3.66952e+07 0 0.176354 0.991911 0.792783 7.38767e+07 0.00405371 1.65601e+07 8.42165e+06 1.6614e+07 181 1.66241e+07 1.12991e+07 0.00312637 1.6809e+07 50.2764 0.00891784 0.995497 0 50.0812 GTEX-1212Z-2426-SM-5EQ5D 1 B1 2 pieces, several large central defects (poor fixation), ~10% fibrous 6.9 Adipose Tissue Adipose - Subcutaneous 0002190 757 1005 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.99054 325281 0.973779 0.992995 0.795577 23831 1 76 0.00199618 209 0 8.38066e+07 0.0258842 407368 8.43978e+07 1.09204e+07 23857 4.16997e+07 0 0.178202 0.992995 0.790004 8.38066e+07 0.00288161 1.83285e+07 8.71708e+06 1.8451e+07 231 1.84716e+07 1.4637e+07 0.0024378 1.85027e+07 50.0421 0.00482676 0.995449 0 50.1664 GTEX-1212Z-2526-SM-5EGKP 1 B1 6 pieces, each with ~10% attached and intradermal fat, squamous epithelium measures 30-40 microns 7.6 Skin Skin - Sun Exposed (Lower leg) 0004264 757 1005 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.98512 364018 0.970647 0.989522 0.794868 23560 1 76 0.00189148 200 0 8.11528e+07 0.0290452 343556 8.2012e+07 7.82244e+06 23588 4.02759e+07 0 0.175779 0.989522 0.786539 8.11528e+07 0.00325675 1.7509e+07 9.47886e+06 1.7641e+07 196 1.77129e+07 1.39753e+07 0.00257108 1.77755e+07 50.0882 0.00418909 0.993925 0 50.1878 GTEX-1212Z-2626-SM-5YY8P 2 B1 2 pieces, ~10% attached fat on one piece, small portion of tendon 8.2 Muscle Muscle - Skeletal 0011907 761 1001 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-5304 05/19/2014 TruSeq.v1 RNASEQ 0.993115 163401 0.983513 0.994133 0.866696 20617 1 76 0.00222932 271 0 1.15124e+08 0.0162387 1.23818e+06 1.15804e+08 5.18786e+06 20633 5.73757e+07 0 0.116817 0.994133 0.861611 1.15124e+08 0.00278289 2.46114e+07 1.3126e+07 2.482e+07 321 2.47427e+07 2.54247e+07 0.00250583 2.4795e+07 50.0528 0.0106921 0.995151 0 50.211 GTEX-1212Z-2726-SM-5EQ59 1 B1 4 pieces, includes up to ~30% predominantly attached fat 7.6 Nerve Nerve - Tibial 0001323 762 1000 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.991182 231677 0.966113 0.993295 0.741883 23753 1 76 0.00209402 143 0 6.38303e+07 0.0335763 202613 6.42612e+07 7.84667e+06 23786 3.17429e+07 0 0.22423 0.993295 0.736909 6.38303e+07 0.00311761 1.40068e+07 6.07003e+06 1.41102e+07 143 1.41009e+07 9.90956e+06 0.00260473 1.41451e+07 50.0782 0.00315296 0.995407 0 50.184 GTEX-1212Z-2826-SM-59HJ5 1 B1 2 pieces, atherosclerosis, focal medial calcification 7.6 Blood Vessel Artery - Tibial 0007610 762 1000 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4419 01/14/2014 TruSeq.v1 RNASEQ 0.981188 252798 0.972137 0.98761 0.805682 22520 1 76 0.00244267 170 0 8.64423e+07 0.0274461 522841 8.75268e+07 1.68029e+07 22549 4.28172e+07 0 0.166455 0.98761 0.7957 8.64423e+07 0.00887616 1.8381e+07 7.90269e+06 1.85872e+07 182 1.87458e+07 1.60603e+07 0.00563849 1.87319e+07 49.9815 0.0059735 0.994033 0 50.2789 GTEX-1212Z-2926-SM-59HKV 1 B1 1 piece, adenohypophysis, neurohypophysis, and pars intermedia 6.7 Pituitary Pituitary 0000007 814 948 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4419 01/14/2014 TruSeq.v1 RNASEQ 0.98187 286987 0.960519 0.987671 0.763417 25157 1 76 0.00254686 128 0 6.98695e+07 0.0391994 566121 7.07416e+07 1.26853e+07 25195 3.46451e+07 0 0.197101 0.987671 0.754005 6.98695e+07 0.00889306 1.46538e+07 1.04981e+07 1.47411e+07 154 1.48644e+07 9.58547e+06 0.00570132 1.48985e+07 50.0571 0.00800266 0.993472 0 50.1484 GTEX-12584-0004-SM-58Q8Q B1 Blood Whole Blood 0013756 906 BP-40801 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/15/2013 LCSET-4574 01/20/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-12584-0004-SM-5DWTJ B1 Blood Whole Blood 0013756 906 BP-40801 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/15/2013 GTEx_OM25_Dec_01 01/29/2014 Illumina OMNI SNP Array OMNI GTEX-12584-0004-SM-7DRPH B1 Blood Whole Blood 0013756 906 BP-40801 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/15/2013 LCSET-6341 01/12/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-12584-0005-SM-5N9GM B1 8.9 Blood Whole Blood 0013756 906 BP-40739 RNA isolation_PAXgene Blood RNA (Manual) 07/12/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.959999 482759 0.982367 0.961704 0.806881 19652 1 76 0.00439976 121 0 9.96089e+07 0.0166404 93063 1.03575e+08 5.27504e+06 19663 4.94854e+07 0 0.175486 0.961704 0.775981 9.96089e+07 0.00448262 2.35399e+07 1.45322e+08 2.3702e+07 154 2.3748e+07 2.71969e+07 0.00444112 2.36649e+07 49.9124 0.000898505 0.963408 0 50.1716 GTEX-12584-0008-SM-664MB B1 9.6 Skin Cells - Cultured fibroblasts EFO_0002009 924 BP-45552 RNA isolation_Trizol Manual (Cell Pellet) 11/06/2013 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.992457 424991 0.976111 0.993158 0.858692 21382 1 76 0.00204233 281 0 1.02605e+08 0.0235517 406249 1.03312e+08 6.0795e+06 21406 5.10971e+07 0 0.117419 0.993158 0.852817 1.02605e+08 0.00287062 2.29413e+07 1.2955e+07 2.30323e+07 275 2.29729e+07 2.44407e+07 0.00245618 2.30824e+07 50.1189 0.00393227 0.99386 0 50.099 GTEX-12584-0011-R6a-SM-5NQ7C B1, A1 5.7 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 911 BP-43314 RNA isolation_PAXgene Tissue miRNA 09/09/2013 LCSET-4906 03/22/2014 TruSeq.v1 RNASEQ 0.990262 221154 0.975229 0.991766 0.833922 20821 1 76 0.00190314 367 0 7.52095e+07 0.0246901 8.932e+06 7.5834e+07 5.72087e+06 20826 3.74662e+07 0 0.141307 0.991766 0.827055 7.52095e+07 0.00292212 1.63267e+07 3.77119e+07 1.65753e+07 343 1.62538e+07 3.91854e+06 0.00241186 1.67679e+07 50.7785 0.117784 0.993269 0 50.3777 GTEX-12584-0126-SM-5EGKQ 1 B1 6 pieces; well trimmed; 10% intradermal fat 8.7 Skin Skin - Sun Exposed (Lower leg) 0004264 926 615 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.99124 282499 0.976953 0.993552 0.815464 23305 1 76 0.00190872 193 0 7.59693e+07 0.0227162 242721 7.64623e+07 6.55040e+06 23325 3.78088e+07 0 0.161489 0.993552 0.810206 7.59693e+07 0.00292989 1.66874e+07 8.63582e+06 1.67911e+07 181 1.68241e+07 1.46181e+07 0.00241812 1.68189e+07 49.9923 0.00317439 0.995865 0 50.1549 GTEX-12584-0226-SM-5EQL5 1 B1 2 pieces: 1 50% fibrous content, other 20% fibrous 6.4 Adipose Tissue Adipose - Subcutaneous 0002190 926 615 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.988917 246037 0.974453 0.991395 0.79776 22638 1 76 0.00214457 197 0 7.88787e+07 0.0252505 368118 7.95634e+07 1.04214e+07 22661 3.92414e+07 0 0.176693 0.991395 0.790895 7.88787e+07 0.00332389 1.72172e+07 1.0293e+07 1.73432e+07 203 1.72934e+07 1.22389e+07 0.00273276 1.74563e+07 50.2343 0.00462673 0.993873 0 50.1823 GTEX-12584-0326-SM-59HK2 1 B1 2 pieces: both have 20% internal fat; 1 has 20% external fat 7.4 Nerve Nerve - Tibial 0001323 934 607 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4419 01/14/2014 TruSeq.v1 RNASEQ 0.982685 236153 0.966144 0.988542 0.742006 24027 1 76 0.0025104 141 0 6.8237e+07 0.0335468 168736 6.90279e+07 1.12628e+07 24062 3.38197e+07 0 0.224138 0.988542 0.733504 6.8237e+07 0.00840294 1.48957e+07 7.08546e+06 1.50382e+07 141 1.51537e+07 1.09682e+07 0.00543921 1.51574e+07 50.0061 0.00244446 0.994399 0 50.238 GTEX-12584-0426-SM-5FQTT 1 B1 2 pieces; eccentric fibrofatty plaques; well trimmed 6.7 Blood Vessel Artery - Tibial 0007610 946 595 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.989 207660 0.973669 0.992043 0.784736 21853 1 76 0.00231228 144 0 6.74445e+07 0.0259416 321072 6.79855e+07 9.52954e+06 21873 3.3521e+07 0 0.188933 0.992043 0.778492 6.74445e+07 0.00347989 1.46118e+07 6.5755e+06 1.47357e+07 151 1.47636e+07 1.19378e+07 0.00289429 1.47811e+07 50.0295 0.00472266 0.995087 0 50.2111 GTEX-12584-0526-SM-5FQTS 1 B1 2 pieces 8.6 Muscle Muscle - Skeletal 0011907 947 594 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.991044 218928 0.982335 0.993976 0.84991 19855 1 76 0.00194717 135 0 6.62195e+07 0.0173951 272334 6.66209e+07 9.31867e+06 19866 3.29523e+07 0 0.132426 0.993976 0.844789 6.62195e+07 0.00323411 1.43558e+07 6.35764e+06 1.4366e+07 145 1.44096e+07 1.48386e+07 0.00258874 1.44979e+07 50.1527 0.00408782 0.996907 0 50.0176 GTEX-12584-0726-SM-5FQTK 1 B1 6 pieces; <10% intradermal fat; well trimmed 7.6 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 961 580 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.988392 191462 0.97538 0.991539 0.773155 23628 1 76 0.00231433 144 0 6.83647e+07 0.024375 342682 6.89481e+07 1.01054e+07 23650 3.39984e+07 0 0.202224 0.991539 0.766614 6.83647e+07 0.00362164 1.51136e+07 7.91071e+06 1.51806e+07 156 1.52087e+07 1.08811e+07 0.00296591 1.52893e+07 50.132 0.00497015 0.994686 0 50.1106 GTEX-12584-0826-SM-5FQSK 1 B1 2 pieces 6.5 Thyroid Thyroid 0002046 971 570 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.98809 315026 0.962679 0.991487 0.660231 24798 1 76 0.00240144 152 0 8.35841e+07 0.0370622 256884 8.43018e+07 1.04218e+07 24853 4.15318e+07 0 0.302449 0.991487 0.65461 8.35841e+07 0.00389461 1.82621e+07 9.09928e+06 1.83749e+07 167 1.84462e+07 1.02881e+07 0.00314547 1.84623e+07 50.0218 0.00304719 0.994884 0 50.1541 GTEX-12584-0926-SM-5FQTN 1 B1 2 pieces 6.2 Heart Heart - Left Ventricle 0006566 979 562 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.989077 180287 0.984988 0.992218 0.825534 20440 1 76 0.0021005 266 0 7.53276e+07 0.0148917 2.88856e+06 7.59184e+07 1.09667e+07 20453 3.74749e+07 0 0.159454 0.992218 0.81911 7.53276e+07 0.00357283 1.71588e+07 2.62297e+07 1.64372e+07 278 1.65674e+07 6.83195e+06 0.00283434 1.72139e+07 50.9569 0.0380482 0.995359 0 48.9261 GTEX-12584-1026-SM-59HK3 1 B1 2 pieces: 1 with 10% internal fat, 1 with 5% internal fat 6.3 Heart Heart - Atrial Appendage 0006631 986 555 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4419 01/14/2014 TruSeq.v1 RNASEQ 0.982016 281895 0.975758 0.988178 0.774219 23254 1 76 0.00253818 154 0 7.92383e+07 0.0239946 1.44954e+06 8.01863e+07 1.58047e+07 23282 3.92753e+07 0 0.201539 0.988178 0.765066 7.92383e+07 0.00858005 1.75297e+07 1.12961e+07 1.75275e+07 180 1.76682e+07 1.06827e+07 0.00554028 1.7832e+07 50.2307 0.0180772 0.99434 0 49.9969 GTEX-12584-1426-SM-5EGJ9 1 B1 2 pieces 7.1 Lung Lung 0008952 1006 535 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.985482 298761 0.976435 0.98849 0.724513 23677 1 76 0.00233727 166 0 8.45069e+07 0.0228373 243516 8.5491e+07 7.77223e+06 23711 4.19811e+07 0 0.251922 0.98849 0.716174 8.45069e+07 0.00332695 1.86867e+07 9.65848e+06 1.89271e+07 185 1.8983e+07 1.32759e+07 0.00283061 1.88742e+07 49.8563 0.00284844 0.991498 0 50.3196 GTEX-12584-2126-SM-5FQUM 1 B1 2 pieces: one with 10% fibrous content 6 Adipose Tissue Adipose - Visceral (Omentum) 0010414 1023 518 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.984078 269470 0.974877 0.988011 0.801272 23295 1 76 0.00232185 193 0 7.88435e+07 0.0248735 873022 7.98002e+07 1.11025e+07 23314 3.9143e+07 0 0.173606 0.988011 0.791666 7.88435e+07 0.00408223 1.74578e+07 1.30213e+07 1.74047e+07 208 1.7397e+07 1.13102e+07 0.00319854 1.77624e+07 50.5196 0.0109401 0.991945 0 49.9238 GTEX-12584-3126-SM-5EGKR 1 B1 1 pieces: anterior and posterior 6.5 Pituitary Pituitary 0000007 1107 434 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.989455 301981 0.963201 0.99199 0.743415 25143 1 76 0.0019397 134 0 7.32741e+07 0.0365433 289280 7.38658e+07 6.34531e+06 25175 3.64558e+07 0 0.219786 0.99199 0.73746 7.32741e+07 0.0029559 1.58838e+07 1.23201e+07 1.59758e+07 161 1.60154e+07 1.1062e+07 0.0024465 1.6023e+07 50.0118 0.00391629 0.994525 0 50.1444 GTEX-12696-0002-SM-5SI6U B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 470 BP-45438 RNA isolation_Trizol Manual (Cell Pellet) 11/04/2013 LCSET-4995 04/05/2014 TruSeq.v1 RNASEQ 0.989979 625275 0.964744 0.992352 0.826608 20717 1 76 0.00217483 176 0 8.27587e+07 0.0339636 413765 8.33965e+07 8.37094e+06 20736 4.11373e+07 0 0.138136 0.992352 0.820286 8.27587e+07 0.00326894 1.82271e+07 1.64432e+07 1.83186e+07 181 1.83358e+07 1.87919e+07 0.00272057 1.84112e+07 50.1025 0.00496142 0.994725 0 50.1253 GTEX-12696-0003-SM-5DWTK B1 Blood Whole Blood 0013756 470 BP-40801 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/15/2013 GTEx_OM25_Dec_01 01/28/2014 Illumina OMNI SNP Array OMNI GTEX-12696-0005-SM-5LZYS B1 9.2 Blood Whole Blood 0013756 470 BP-40739 RNA isolation_PAXgene Blood RNA (Manual) 07/12/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.988878 443576 0.972843 0.990111 0.751622 19619 1 76 0.00353397 110 0 7.1356e+07 0.0266215 188084 7.20686e+07 4.01394e+06 19638 3.54721e+07 0 0.221221 0.990111 0.744189 7.1356e+07 0.00407941 1.59237e+07 3.93046e+07 1.61685e+07 129 1.62183e+07 1.3898e+07 0.00380635 1.59714e+07 49.6165 0.00260979 0.991344 0 50.3813 GTEX-12696-0008-SM-5TDBX B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 599 BP-45532 RNA isolation_Trizol Manual (Cell Pellet) 11/06/2013 LCSET-5048 04/03/2014 TruSeq.v1 RNASEQ 0.987561 449932 0.978611 0.992086 0.869113 21239 1 76 0.0019307 214 0 8.93836e+07 0.0211216 236195 9.00966e+07 1.16943e+07 21251 4.43925e+07 0 0.109498 0.992086 0.862235 8.93836e+07 0.00371013 1.99898e+07 1.26321e+07 2.00909e+07 209 2.01954e+07 2.25124e+07 0.00281636 2.02893e+07 50.1159 0.00262158 0.996611 0 50.1262 GTEX-12696-0126-SM-5EQ4L 0 B1 6 pieces, minimal dermal fat; squamous epithelium is ~50 microns 7.1 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 485 1210 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.989215 306558 0.974029 0.99245 0.767898 23970 1 76 0.00210108 181 0 8.45873e+07 0.0257326 534182 8.52308e+07 1.02413e+07 24007 4.20402e+07 0 0.206131 0.99245 0.7621 8.45873e+07 0.00329784 1.87435e+07 9.35708e+06 1.88331e+07 201 1.88417e+07 1.3638e+07 0.00269751 1.89967e+07 50.2049 0.00626748 0.995686 0 50.1192 GTEX-12696-0226-SM-5EGL3 1 B1 2 pieces, mild-moderate autolysis, focally approaching score '2'--spermatogenesis present, appears reduced 6.6 Testis Testis 0000473 489 1206 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.988013 336725 0.925317 0.990828 0.697816 33030 1 76 0.00207655 153 0 7.89606e+07 0.0743969 665318 7.96915e+07 6.90289e+06 33104 3.92687e+07 0 0.2275 0.990828 0.691416 7.89606e+07 0.00310711 1.63252e+07 1.19509e+07 1.63877e+07 161 1.64421e+07 1.16404e+07 0.00259036 1.64683e+07 50.0398 0.00834867 0.993644 0 50.0955 GTEX-12696-0326-SM-5EGL4 1 B1 2 pieces, regressive changes 7.6 Thyroid Thyroid 0002046 497 1198 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.985901 317603 0.96554 0.990124 0.748775 24671 1 76 0.00195779 164 0 8.64927e+07 0.0341873 165877 8.73555e+07 8.63763e+06 24716 4.29533e+07 0 0.216765 0.990124 0.741379 8.64927e+07 0.00306037 1.87045e+07 8.35103e+06 1.89027e+07 194 1.90049e+07 1.45961e+07 0.00250673 1.89439e+07 49.9196 0.00189887 0.994346 0 50.2635 GTEX-12696-0326-SM-DK2K4 1 B1 2 pieces, regressive changes Thyroid Thyroid 0002046 497 1198 BP-51565 DNA Extraction from Paxgene-derived Lysate Plate Based 04/14/2014 LCSET-10424 01/28/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-12696-0326-SM-DLIOI 1 B1 2 pieces, regressive changes Thyroid Thyroid 0002046 497 1198 BP-51565 DNA Extraction from Paxgene-derived Lysate Plate Based 04/14/2014 LCSET-10442 01/23/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-12696-0426-SM-5EGL5 1 B1 6 pieces, minimal atherosis, adherent serosa up to ~0.5mm 7.2 Blood Vessel Artery - Aorta 0001496 501 1194 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.988742 277894 0.973356 0.991365 0.781845 22686 1 76 0.0019975 140 0 7.34528e+07 0.0262877 206302 7.40926e+07 5.69604e+06 22712 3.65167e+07 0 0.191511 0.991365 0.775093 7.34528e+07 0.00303412 1.58654e+07 6.10347e+06 1.60711e+07 162 1.60823e+07 1.30951e+07 0.00251444 1.60383e+07 49.9315 0.00278438 0.993988 0 50.322 GTEX-12696-0526-SM-5EQ3Z 1 B1 2 pieces, mild (20%) occlusive atherosis, focally calcified, encircled 6.2 Blood Vessel Artery - Coronary 0001621 525 1170 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.988811 281071 0.972043 0.991657 0.794985 22522 1 76 0.00206608 164 0 8.61305e+07 0.0275778 284502 8.68551e+07 1.10338e+07 22547 4.28102e+07 0 0.177058 0.991657 0.788353 8.61305e+07 0.00326115 1.84512e+07 8.18703e+06 1.862e+07 200 1.86216e+07 1.58522e+07 0.0026619 1.86874e+07 50.0883 0.00327559 0.994504 0 50.2278 GTEX-12696-0626-SM-5EGGD 1 B1 2 pieces, all cortex, good specimens, minimal fat 7.2 Adrenal Gland Adrenal Gland 0002369 514 1181 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.981612 223664 0.967422 0.987072 0.795373 23464 1 76 0.00246893 131 0 6.51676e+07 0.0323308 654150 6.60211e+07 1.12411e+07 23486 3.23283e+07 0 0.172049 0.987072 0.78509 6.51676e+07 0.00563208 1.40975e+07 8.99157e+06 1.42253e+07 147 1.43242e+07 1.03737e+07 0.00404176 1.43294e+07 50.009 0.00990819 0.992532 0 50.2255 GTEX-12696-0826-SM-5EGGE 1 B1 2 pieces, moderate congestion; no significant steatosis 7 Liver Liver 0001114 519 1176 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.985727 196329 0.975666 0.989988 0.814138 20110 1 76 0.00246678 126 0 6.24696e+07 0.0234205 515867 6.31014e+07 8.96553e+06 20127 3.10113e+07 0 0.161528 0.989988 0.805987 6.24696e+07 0.00551516 1.36262e+07 1.15721e+07 1.35379e+07 148 1.35974e+07 9.50579e+06 0.00398441 1.38087e+07 50.3855 0.0081752 0.994249 0 49.8374 GTEX-12696-0926-SM-5FQTV 1 B1 6 pieces, all cortex; glomeruli present 7.8 Kidney Kidney - Cortex 0001225 521 1174 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.988527 281996 0.970547 0.99142 0.811145 23620 1 76 0.00237111 156 0 7.04608e+07 0.0292285 1.23927e+06 7.10706e+07 9.38508e+06 23650 3.50459e+07 0 0.159402 0.99142 0.804185 7.04608e+07 0.00378682 1.54589e+07 8.40991e+06 1.54536e+07 175 1.54902e+07 1.06385e+07 0.0030769 1.56097e+07 50.1921 0.0174372 0.994312 0 49.9915 GTEX-12696-1026-SM-5FQUV 2 B1 2 pieces, moderate congestion 7.6 Lung Lung 0008952 524 1171 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.986564 256404 0.972826 0.990547 0.786685 24454 1 76 0.00260485 139 0 7.13813e+07 0.0263741 196453 7.20626e+07 1.05532e+07 24483 3.54396e+07 0 0.186141 0.990547 0.779249 7.13813e+07 0.00393834 1.57174e+07 7.97924e+06 1.58151e+07 156 1.58886e+07 1.24058e+07 0.00326892 1.59125e+07 50.0376 0.00272615 0.994529 0 50.1549 GTEX-12696-1126-SM-5FQTI 1 B1 2 pieces, mild interstitial fibrosis, no infarcts noted 8.6 Heart Heart - Left Ventricle 0006566 529 1166 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.991879 215094 0.982657 0.994371 0.857789 20779 1 76 0.0022099 196 0 7.62408e+07 0.0171104 1.06234e+06 7.66724e+07 1.03985e+07 20790 3.79629e+07 0 0.124868 0.994371 0.852961 7.62408e+07 0.00333007 1.70259e+07 1.39281e+07 1.6466e+07 229 1.66087e+07 1.36673e+07 0.00276858 1.704e+07 50.6409 0.0138556 0.996863 0 49.1642 GTEX-12696-1226-SM-5FQSM 1 B1 2 pieces, no abnormalities 7.8 Heart Heart - Atrial Appendage 0006631 533 1162 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.990746 275058 0.977969 0.993613 0.810408 22577 1 76 0.00229452 268 0 8.87689e+07 0.0217856 1.23166e+06 8.93394e+07 1.24828e+07 22597 4.417e+07 0 0.167561 0.993613 0.805232 8.87689e+07 0.00349999 1.91238e+07 1.74012e+07 1.88513e+07 263 1.883e+07 1.37893e+07 0.00289552 1.93749e+07 50.7132 0.0137863 0.99648 0 49.6412 GTEX-12696-1326-SM-5FQTJ 1 B1 6 pieces, squamous mucosa ~20% thickness, prominent submucosal glands noted, encircled 8.4 Esophagus Esophagus - Mucosa 0006920 534 1161 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.98913 265506 0.973998 0.992147 0.792735 22900 1 76 0.00235982 161 0 7.74001e+07 0.0256419 233012 7.80128e+07 1.16233e+07 22921 3.84938e+07 0 0.181262 0.992147 0.78651 7.74001e+07 0.0036994 1.72895e+07 1.06645e+07 1.73785e+07 174 1.74237e+07 1.40251e+07 0.00302757 1.7471e+07 50.0678 0.00298684 0.995163 0 50.1284 GTEX-12696-1426-SM-5EGJ6 1 B1 6 pieces, all muscularis, good specimens 7.1 Esophagus Esophagus - Muscularis 0004648 538 1157 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.989264 403926 0.964529 0.99234 0.78475 23306 1 76 0.00196928 205 0 8.3268e+07 0.0352332 467333 8.39108e+07 7.97554e+06 23335 4.1401e+07 0 0.179779 0.99234 0.778739 8.3268e+07 0.00296677 1.77568e+07 1.31223e+07 1.79596e+07 222 1.79949e+07 1.37518e+07 0.00246648 1.79602e+07 49.9518 0.00556941 0.995416 0 50.2839 GTEX-12696-1526-SM-5EGL6 1 B1 6 pieces, all muscularis, good specimens 7.4 Esophagus Esophagus - Gastroesophageal Junction 0004550 545 1150 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.987351 251082 0.967791 0.990854 0.76434 22960 1 76 0.00203639 136 0 7.23089e+07 0.0319994 303191 7.29764e+07 6.92301e+06 22992 3.59197e+07 0 0.20345 0.990854 0.75735 7.23089e+07 0.00326786 1.55183e+07 6.43785e+06 1.56831e+07 160 1.5688e+07 1.14835e+07 0.00264995 1.57529e+07 50.1031 0.00415465 0.994357 0 50.2641 GTEX-12696-1726-SM-5EQLH 1 B1 6 pieces, mucosa well preserved, ~1mm thick, 30-50% thickness 6.8 Stomach Stomach 0000945 555 1140 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.971603 141521 0.983592 0.973671 0.848965 21076 1 76 0.00216163 372 0 6.72982e+07 0.0156706 466566 6.9118e+07 9.8982e+06 21088 3.34862e+07 0 0.134627 0.973671 0.826613 6.72982e+07 0.00326266 1.55648e+07 1.21108e+08 1.60415e+07 242 1.60235e+07 1.96781e+07 0.00271098 1.57218e+07 49.5248 0.00675028 0.975739 0 50.754 GTEX-12696-1826-SM-5EGJS 1 B1 2 pieces; ~10% fibrosvascular tissue (rep delineated), moderate mesothelial prominence/hyperplasia 6.9 Adipose Tissue Adipose - Visceral (Omentum) 0010414 557 1138 BP-44525 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.990634 245338 0.979426 0.993315 0.818622 22513 1 76 0.00200982 205 0 7.71023e+07 0.0203132 531073 7.76212e+07 7.20071e+06 22531 3.8362e+07 0 0.160803 0.993315 0.81315 7.71023e+07 0.00298388 1.7008e+07 1.30662e+07 1.70579e+07 218 1.70858e+07 1.29431e+07 0.00249553 1.71702e+07 50.1232 0.00684185 0.995996 0 50.0732 GTEX-12696-1926-SM-5EGJT 1 B1 6 pieces, all muscularis 6.4 Colon Colon - Sigmoid 0001159 563 1132 BP-44525 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.989823 266461 0.972544 0.992739 0.821412 22890 1 76 0.00188986 165 0 7.30652e+07 0.0272146 369665 7.35996e+07 6.26342e+06 22909 3.63227e+07 0 0.151131 0.992739 0.815448 7.30652e+07 0.00315997 1.57462e+07 6.76981e+06 1.58913e+07 182 1.58853e+07 1.22211e+07 0.00252305 1.59509e+07 50.1031 0.00502265 0.995655 0 50.2292 GTEX-12696-2226-SM-5EQ65 2 B1 2 piecesm hyperplastic glandular pattern; glandular epithelium moderately/markedly autolyzed 6.7 Prostate Prostate 0002367 571 1124 BP-44525 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.990222 217094 0.972218 0.993153 0.819126 22095 1 76 0.00192779 131 0 6.16841e+07 0.0275512 282745 6.21093e+07 8.2293e+06 22111 3.06731e+07 0 0.153092 0.993153 0.813517 6.16841e+07 0.00304608 1.32864e+07 5.57054e+06 1.34355e+07 145 1.34169e+07 1.11059e+07 0.00248529 1.34776e+07 50.1129 0.00455238 0.996085 0 50.2789 GTEX-12696-2426-SM-5EQ6H 0 B1 6 pieces, minimal dermal fat; squamous epithelium is ~30 microns 7.1 Skin Skin - Sun Exposed (Lower leg) 0004264 600 1095 BP-44525 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.988861 338032 0.97353 0.99151 0.79587 22870 1 76 0.00211217 173 0 7.29389e+07 0.0262324 389403 7.35634e+07 9.10666e+06 22897 3.62791e+07 0 0.17766 0.99151 0.789113 7.29389e+07 0.00320224 1.60248e+07 8.32579e+06 1.62172e+07 172 1.62117e+07 1.24228e+07 0.00265575 1.62155e+07 50.0059 0.00529343 0.994159 0 50.2985 GTEX-12696-2526-SM-5EQLN 0 B1 2 pieces; 10-20% fibro/fascial tissue, rep. delineated 7.3 Adipose Tissue Adipose - Subcutaneous 0002190 601 1094 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.992115 234619 0.977162 0.994126 0.821546 22595 1 76 0.0021189 206 0 8.44711e+07 0.0225486 667893 8.49702e+07 1.03484e+07 22616 4.20541e+07 0 0.155616 0.994126 0.816721 8.44711e+07 0.00314246 1.85283e+07 1.02976e+07 1.86334e+07 245 1.85985e+07 1.40285e+07 0.00262965 1.8725e+07 50.1694 0.00786032 0.996138 0 50.1413 GTEX-12696-2626-SM-5EQ44 0 B1 2 pieces, minimal adherent fat, clean specimens 7.1 Nerve Nerve - Tibial 0001323 605 1090 BP-44525 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.991187 261579 0.968171 0.993429 0.745439 23345 1 76 0.00207428 161 0 6.94058e+07 0.0315395 259012 6.98649e+07 7.74192e+06 23384 3.4529e+07 0 0.222732 0.993429 0.740541 6.94058e+07 0.00315087 1.52324e+07 6.49942e+06 1.53981e+07 156 1.53889e+07 1.07987e+07 0.00261136 1.5388e+07 49.9986 0.00370733 0.995671 0 50.2706 GTEX-12696-2726-SM-5FQUL 0 B1 2 pieces, focal adherent fibrous tissue, delineated, good clean specimens 7.5 Blood Vessel Artery - Tibial 0007610 611 1084 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.989299 229457 0.977514 0.992653 0.847825 21051 1 76 0.00217741 158 0 7.10948e+07 0.0221144 263254 7.1621e+07 1.05574e+07 21062 3.53429e+07 0 0.12969 0.992653 0.841595 7.10948e+07 0.00350054 1.53576e+07 6.14852e+06 1.54614e+07 165 1.54838e+07 1.44276e+07 0.00283674 1.55642e+07 50.1295 0.00367565 0.996006 0 50.1683 GTEX-12696-2826-SM-5FQTY 0 B1 2 pieces; ~10% interstitial/adherent fibroadipose tissue, rep. delineated 7.7 Muscle Muscle - Skeletal 0011907 614 1081 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.990406 239819 0.982098 0.993369 0.864203 19998 1 76 0.00212121 206 0 7.92654e+07 0.0176496 596417 7.97946e+07 1.08001e+07 20009 3.94445e+07 0 0.117895 0.993369 0.858472 7.92654e+07 0.00344629 1.71615e+07 1.25228e+07 1.69515e+07 227 1.69587e+07 1.56769e+07 0.00278177 1.73675e+07 50.5954 0.00747441 0.996332 0 49.6921 GTEX-12696-2926-SM-5FQTG 1 B1 2 pieces, no abnormalities 7.9 Brain Brain - Cortex 0001870 750 945 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4793 02/19/2014 TruSeq.v1 EXCLUDE 0.98715 263303 0.962333 0.99121 0.777309 23708 1 76 0.00246233 209 0 7.87051e+07 0.0374466 2.00724e+06 7.9403e+07 1.10694e+07 23742 3.91011e+07 0 0.185024 0.99121 0.770476 7.87051e+07 0.00403907 1.72355e+07 1.01589e+07 1.74208e+07 213 1.73769e+07 9.46408e+06 0.00324747 1.75761e+07 50.2849 0.0252792 0.995271 0 50.2672 GTEX-12696-3026-SM-5FQTU 2 B1 2 pieces, no abnormalities, poorly preserved 6.3 Brain Brain - Cerebellum 0002037 755 940 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4793 02/19/2014 TruSeq.v1 EXCLUDE 0.987445 547133 0.938256 0.990878 0.754184 23507 1 76 0.0026701 151 0 6.62165e+07 0.0615046 3.47168e+06 6.68261e+07 8.82786e+06 23527 3.29134e+07 0 0.184073 0.990878 0.747304 6.62165e+07 0.00439974 1.42068e+07 2.79966e+07 1.42911e+07 169 1.42704e+07 6.07143e+06 0.00353193 1.44355e+07 50.2876 0.051951 0.99431 0 50.1479 GTEX-12696-3126-SM-5FQUX 1 B1 1 piece, ~10% neurohypophysis (delineated); ~40% adenohypophysis (ensquared); rest is dura (pink/red tissue) 7.7 Pituitary Pituitary 0000007 757 938 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.98892 248588 0.965113 0.991887 0.734704 24849 1 76 0.00239615 133 0 7.15407e+07 0.0346381 255569 7.21259e+07 1.03115e+07 24888 3.55771e+07 0 0.230409 0.991887 0.728743 7.15407e+07 0.00360269 1.56039e+07 1.04216e+07 1.55862e+07 146 1.56481e+07 1.11315e+07 0.00299761 1.57429e+07 50.1511 0.00354337 0.994854 0 49.9716 GTEX-1269C-0003-SM-5S2PB B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 626 BP-45438 RNA isolation_Trizol Manual (Cell Pellet) 11/04/2013 LCSET-4988 04/01/2014 TruSeq.v1 RNASEQ 0.992622 960172 0.955037 0.993692 0.840115 19953 1 76 0.00187629 157 0 6.93584e+07 0.0439211 605250 6.97987e+07 4.15399e+06 19964 3.45366e+07 0 0.114922 0.993692 0.834815 6.93584e+07 0.00249882 1.50464e+07 1.80687e+07 1.53416e+07 163 1.52872e+07 1.48833e+07 0.00218722 1.51806e+07 49.825 0.00867137 0.994762 0 50.4857 GTEX-1269C-0005-SM-5N9CJ B1 8.9 Blood Whole Blood 0013756 626 BP-40859 RNA isolation_PAXgene Blood RNA (Manual) 07/16/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.969802 303577 0.984169 0.970804 0.801436 17436 1 76 0.00258801 94 0 7.89719e+07 0.015184 143232 8.13469e+07 3.87811e+06 17441 3.93398e+07 0 0.182733 0.970804 0.778037 7.89719e+07 0.00326972 1.87146e+07 1.13524e+08 1.88965e+07 127 1.8887e+07 2.10377e+07 0.00292851 1.88141e+07 49.9033 0.00176076 0.971807 0 50.2419 GTEX-1269C-0008-SM-5TDBY B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 265 BP-45552 RNA isolation_Trizol Manual (Cell Pellet) 11/06/2013 LCSET-5048 04/03/2014 TruSeq.v1 RNASEQ 0.991893 380030 0.980307 0.994434 0.880316 20858 1 76 0.00187904 214 0 8.97431e+07 0.019394 453960 9.02454e+07 1.02202e+07 20876 4.46719e+07 0 0.0999914 0.994434 0.875416 8.97431e+07 0.00341237 2.01531e+07 1.18521e+07 2.02447e+07 242 2.02773e+07 2.28022e+07 0.00264375 2.03479e+07 50.0868 0.00503028 0.996974 0 50.1135 GTEX-1269C-0011-R4b-SM-5P9ES B1, A1 5.7 Brain Brain - Amygdala 0001876 662 BP-43965 RNA isolation_PAXgene Tissue miRNA 09/25/2013 LCSET-4914 03/27/2014 TruSeq.v1 EXCLUDE 0.985275 274287 0.959808 0.984048 0.871978 17039 1 76 0.00335239 259 0 7.11618e+07 0.0400731 1.77593e+07 7.23154e+07 3.49456e+06 17045 3.53159e+07 0 0.0878306 0.984048 0.858068 7.11618e+07 0.00414051 1.55555e+07 2.27853e+07 1.64496e+07 326 1.5885e+07 1.64027e+06 0.00374694 1.59862e+07 50.1587 0.245582 0.982822 0 51.3968 GTEX-1269C-0126-SM-5EQ5L 1 B1 6 pieces, well trimmed with limited internal fat (up to 10%) 7.4 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 758 827 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.990425 256237 0.976391 0.993025 0.769945 22456 1 76 0.00211113 162 0 6.52505e+07 0.0233628 326649 6.57087e+07 7.75872e+06 22484 3.24565e+07 0 0.206445 0.993025 0.764575 6.52505e+07 0.00325155 1.42412e+07 7.46972e+06 1.43726e+07 150 1.4396e+07 1.05034e+07 0.00267985 1.43777e+07 49.9682 0.00497116 0.995626 0 50.2296 GTEX-1269C-0226-SM-5EGKS 2 B1 2 pieces, ~5-10% of each is fat and fibrous/vascular tissue, regressive change 6 Thyroid Thyroid 0002046 771 814 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.988674 297522 0.969449 0.991126 0.71246 24494 1 76 0.00207383 157 0 7.78216e+07 0.0302703 669183 7.85184e+07 6.57874e+06 24530 3.8685e+07 0 0.256988 0.991126 0.706138 7.78216e+07 0.00327758 1.70876e+07 8.35829e+06 1.72796e+07 181 1.72689e+07 9.36713e+06 0.00267422 1.72818e+07 50.0186 0.00852263 0.993579 0 50.2792 GTEX-1269C-0626-SM-5FQSS 2 B1 2 pieces, mild macrovesicular steatosis, passive congestion 6.2 Liver Liver 0001114 794 791 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.986309 256988 0.971471 0.989504 0.825757 21331 1 76 0.00242792 198 0 7.5694e+07 0.0276714 943556 7.64969e+07 9.81613e+06 21344 3.7597e+07 0 0.145713 0.989504 0.81709 7.5694e+07 0.00400888 1.66544e+07 1.50461e+07 1.66428e+07 225 1.65607e+07 9.06727e+06 0.00321585 1.69685e+07 50.608 0.0123346 0.992699 0 49.9825 GTEX-1269C-0826-SM-5N9EM 1 B1 2 pieces 5.7 Heart Heart - Left Ventricle 0006566 798 787 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.986203 281863 0.985365 0.987647 0.826237 19911 1 76 0.00402479 370 0 1.14606e+08 0.0145673 1.06105e+07 1.1604e+08 5.6335e+06 19919 5.70336e+07 0 0.159128 0.987647 0.816031 1.14606e+08 0.00401766 2.45207e+07 6.55235e+07 2.51943e+07 335 2.46672e+07 6.32447e+06 0.00402123 2.51804e+07 50.5148 0.0914389 0.989092 0 50.6774 GTEX-1269C-0926-SM-5FQSR 1 B1 2 pieces, edema, hemorrhage, focus of cartilage 7.5 Lung Lung 0008952 800 785 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.988891 228039 0.978811 0.992059 0.761043 23598 1 76 0.00250771 166 0 7.90435e+07 0.020689 555420 7.96762e+07 1.09855e+07 23629 3.92915e+07 0 0.217768 0.992059 0.755 7.90435e+07 0.00392444 1.75071e+07 8.95044e+06 1.76784e+07 176 1.77125e+07 1.32712e+07 0.00321381 1.77095e+07 49.9958 0.00697096 0.995228 0 50.2434 GTEX-1269C-1026-SM-5N9EY 1 B1 6 pieces 5.7 Esophagus Esophagus - Mucosa 0006920 804 781 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.98817 344506 0.978542 0.989557 0.859998 21616 1 76 0.00411308 270 0 9.91439e+07 0.0210796 1.93644e+06 1.0019e+08 4.91303e+06 21625 4.92745e+07 0 0.118544 0.989557 0.851016 9.91439e+07 0.00417657 2.2355e+07 1.33566e+07 2.24728e+07 317 2.24351e+07 1.56405e+07 0.00414478 2.25309e+07 50.1065 0.0193276 0.990943 0 50.1314 GTEX-1269C-1826-SM-5N9E1 1 B1 2 pieces, multiple corpora albicantia 5.7 Ovary Ovary 0000992 827 758 BP-44525 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.984677 414709 0.964035 0.986059 0.742968 24995 1 76 0.00399825 284 0 1.15024e+08 0.0357286 413140 1.1665e+08 5.39287e+06 25041 5.71521e+07 0 0.221067 0.986059 0.73261 1.15024e+08 0.00408438 2.50037e+07 1.60382e+07 2.51902e+07 280 2.51454e+07 2.04944e+07 0.00404125 2.5217e+07 50.0711 0.0035417 0.987441 0 50.1858 GTEX-1269C-1826-SM-DO3X2 1 B1 2 pieces, multiple corpora albicantia Ovary Ovary 0000992 827 758 BP-53662 DNA Extraction from Paxgene-derived Lysate Plate Based 06/09/2014 LCSET-10562 02/14/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1269C-2026-SM-DK2JN 1 B1 2 pieces, includes both endometrium and myometrium Uterus Uterus 0000995 834 751 BP-49274 DNA Extraction from Paxgene-derived Lysate Plate Based 02/10/2014 LCSET-10424 01/28/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-1269C-2026-SM-DLIOA 1 B1 2 pieces, includes both endometrium and myometrium Uterus Uterus 0000995 834 751 BP-49274 DNA Extraction from Paxgene-derived Lysate Plate Based 02/10/2014 LCSET-10442 01/23/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) EXCLUDE GTEX-1269C-2426-SM-5FQSN 1 B1 2 pieces, one piece is predominantly fatty, second is 50% fat/50% fibrous stroma and ductal elements 7.2 Breast Breast - Mammary Tissue 0008367 853 732 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.988182 262056 0.970398 0.991384 0.728297 25510 1 76 0.00251716 207 0 8.64368e+07 0.0289497 506802 8.7188e+07 1.1839e+07 25557 4.29567e+07 0 0.242101 0.991384 0.722022 8.64368e+07 0.00385233 1.91123e+07 9.74995e+06 1.91667e+07 215 1.92179e+07 1.23838e+07 0.00318259 1.93228e+07 50.136 0.00581275 0.994586 0 50.0711 GTEX-1269C-2526-SM-5EGJ3 1 B1 6 pieces, 5-10% predominantly internal fat, squamous epithelium measures ~45 microns 7.5 Skin Skin - Sun Exposed (Lower leg) 0004264 985 600 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.984319 263250 0.975315 0.987035 0.828615 23494 1 76 0.00191077 244 0 8.23142e+07 0.0244007 327256 8.33954e+07 7.31024e+06 23520 4.09475e+07 0 0.146699 0.987035 0.817873 8.23142e+07 0.00288098 1.78606e+07 9.14255e+06 1.80319e+07 238 1.80786e+07 1.55823e+07 0.00239454 1.80235e+07 49.9236 0.00392415 0.989752 0 50.2387 GTEX-1269C-2626-SM-5EQ5C 1 B1 2 pieces 7.9 Muscle Muscle - Skeletal 0011907 986 599 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.992156 261531 0.982056 0.994385 0.860189 19854 1 76 0.00176935 156 0 7.3866e+07 0.0177319 1.06894e+06 7.42831e+07 9.05462e+06 19867 3.67774e+07 0 0.121868 0.994385 0.855358 7.3866e+07 0.0026114 1.61696e+07 1.01462e+07 1.62217e+07 191 1.62294e+07 1.5264e+07 0.00218943 1.63074e+07 50.1198 0.01439 0.996613 0 50.0804 GTEX-1269C-2726-SM-5EGJ4 1 B1 2 pieces, 30-40% fibrovascular tissue 7 Adipose Tissue Adipose - Subcutaneous 0002190 987 598 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.988561 279615 0.971365 0.992033 0.801284 23736 1 76 0.00198249 209 0 8.40017e+07 0.0282682 561436 8.46764e+07 8.06012e+06 23763 4.17525e+07 0 0.17008 0.992033 0.794901 8.40017e+07 0.00298364 1.83056e+07 9.41835e+06 1.84778e+07 245 1.85521e+07 1.40246e+07 0.00248131 1.85039e+07 49.935 0.00663037 0.995505 0 50.234 GTEX-1269C-2826-SM-5EQ5O 1 B1 2 pieces, medial cacific sclerosis (Monckeberg's arteriosclerosis), well trimmed 6.6 Blood Vessel Artery - Tibial 0007610 987 598 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.988733 226437 0.975399 0.991858 0.82319 21201 1 76 0.00196976 159 0 7.0572e+07 0.0242023 596775 7.11513e+07 9.56188e+06 21216 3.50667e+07 0 0.152209 0.991858 0.816488 7.0572e+07 0.00298018 1.51215e+07 6.81329e+06 1.52516e+07 167 1.52343e+07 1.32028e+07 0.00247338 1.53503e+07 50.1896 0.0083874 0.994984 0 50.2142 GTEX-1269C-3126-SM-5EGI6 1 B1 2 pieces 6.1 Brain Brain - Cerebellum 0002037 1041 544 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.983624 298899 0.952453 0.988774 0.784891 22579 1 76 0.00247955 121 0 5.88273e+07 0.0473236 2.56684e+06 5.94952e+07 8.7326e+06 22591 2.91928e+07 0 0.167562 0.988774 0.77608 5.88273e+07 0.00576188 1.27812e+07 1.71575e+07 1.2689e+07 158 1.26793e+07 4.78573e+06 0.00411216 1.30551e+07 50.7301 0.0431437 0.993924 0 49.8189 GTEX-1269C-3226-SM-5EGKT 1 B1 1 piece, adenohypophysis 6.7 Pituitary Pituitary 0000007 1043 542 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.988466 262775 0.970088 0.990593 0.799196 23636 1 76 0.00196335 267 0 7.80529e+07 0.0296852 3.14332e+06 7.87941e+07 6.75072e+06 23663 3.88622e+07 0 0.170892 0.990593 0.791678 7.80529e+07 0.00287599 1.72721e+07 1.28083e+07 1.73301e+07 258 1.72761e+07 8.91334e+06 0.00241869 1.74812e+07 50.2951 0.0398929 0.992721 0 50.0837 GTEX-12BJ1-0001-SM-5DU4Z B1 Blood Whole Blood 0013756 1178 BP-40985 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/18/2013 LCSET-4834 02/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-12BJ1-0001-SM-7DRPO B1 Blood Whole Blood 0013756 1178 BP-40985 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/18/2013 LCSET-6341 01/12/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) EXCLUDE GTEX-12BJ1-0003-SM-5SI6V B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 1178 BP-45438 RNA isolation_Trizol Manual (Cell Pellet) 11/04/2013 LCSET-4995 04/05/2014 TruSeq.v1 RNASEQ 0.991645 1.32294e+06 0.961293 0.993903 0.822525 21552 1 76 0.00210097 174 0 8.41749e+07 0.0381025 469618 8.46912e+07 7.86974e+06 21575 4.18933e+07 0 0.138768 0.993903 0.81751 8.41749e+07 0.00318231 1.85832e+07 1.25798e+07 1.86698e+07 190 1.87057e+07 1.86788e+07 0.00264041 1.8735e+07 50.0392 0.00554506 0.996161 0 50.1162 GTEX-12BJ1-0006-SM-5SIB5 B1 9 Blood Whole Blood 0013756 1178 BP-41053 RNA isolation_PAXgene Blood RNA (Manual) 07/19/2013 LCSET-5174 04/04/2014 TruSeq.v1 RNASEQ 0.987666 830080 0.955432 0.990638 0.801174 19368 1 76 0.0021912 203 0 9.21606e+07 0.0440348 325105 9.30316e+07 1.05703e+07 19384 4.58475e+07 0 0.154258 0.990638 0.793673 9.21606e+07 0.00341847 2.0211e+07 6.21236e+07 2.03684e+07 218 2.04456e+07 1.96572e+07 0.00280299 2.04096e+07 49.9559 0.00349457 0.99361 0 50.194 GTEX-12BJ1-0008-SM-5TDBZ B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 300 BP-45552 RNA isolation_Trizol Manual (Cell Pellet) 11/06/2013 LCSET-5048 04/03/2014 TruSeq.v1 RNASEQ 0.990661 558880 0.976456 0.993624 0.883291 20935 1 76 0.00188369 281 0 9.89433e+07 0.0232736 289192 9.95782e+07 1.3e+07 20945 4.92248e+07 0 0.0931653 0.993624 0.877659 9.89433e+07 0.00346979 2.20795e+07 1.71401e+07 2.21494e+07 272 2.21975e+07 2.50962e+07 0.00267438 2.23256e+07 50.1439 0.00290417 0.996588 0 50.0791 GTEX-12BJ1-0126-SM-5LU9P 1 B1 6 pieces, foci of atherosis, up to 1.5 mm thick 7.3 Blood Vessel Artery - Aorta 0001496 102 1023 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4899 03/23/2014 TruSeq.v1 EXCLUDE 0.992053 189860 0.9751 0.993902 0.819715 21770 1 76 0.00436103 126 0 5.96592e+07 0.0246251 594290 6.00252e+07 5.22842e+06 21783 2.96848e+07 0 0.155385 0.993902 0.814716 5.96592e+07 0.00356945 1.30488e+07 5.33714e+06 1.31361e+07 135 1.31088e+07 1.067e+07 0.00396597 1.31864e+07 50.1474 0.00990068 0.995751 0 50.1666 GTEX-12BJ1-0226-SM-5LUA2 1 B1 2 pieces, patchy mild-moderate intersitital fibrosis, micro infarct noted (encircled) 6 Heart Heart - Left Ventricle 0006566 103 1022 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.990917 245982 0.983668 0.992763 0.85106 19585 1 76 0.00416648 147 0 6.52043e+07 0.0160881 1.31817e+06 6.56796e+07 6.03331e+06 19593 3.2454e+07 0 0.132608 0.992763 0.844901 6.52043e+07 0.00332181 1.41846e+07 1.99498e+07 1.42279e+07 166 1.42029e+07 1.01386e+07 0.00374493 1.43362e+07 50.2334 0.0200697 0.994608 0 50.0762 GTEX-12BJ1-0326-SM-5FQUB 2 B1 2 pieces, fat necrosis, fibrosis 7.6 Heart Heart - Atrial Appendage 0006631 105 1020 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.987913 229809 0.982605 0.99105 0.829357 21397 1 76 0.00199798 269 0 9.35198e+07 0.0172461 1.64052e+06 9.43644e+07 1.30793e+07 21408 4.65413e+07 0 0.153248 0.99105 0.821934 9.35198e+07 0.00330706 1.98026e+07 3.49149e+07 1.95039e+07 300 1.93191e+07 1.26166e+07 0.00265044 2.02421e+07 51.1664 0.0173849 0.994187 0 49.62 GTEX-12BJ1-0426-SM-5FQSO 1 B1 2 pieces, single lymphoid aggregate (encircled), features of multinodular goiter 6.9 Thyroid Thyroid 0002046 107 1018 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.990366 188946 0.972526 0.99324 0.784706 23797 1 76 0.00209614 158 0 7.28952e+07 0.0271547 288412 7.33913e+07 9.20998e+06 23828 3.62638e+07 0 0.187821 0.99324 0.779402 7.28952e+07 0.00342732 1.60779e+07 7.14405e+06 1.6117e+07 166 1.61342e+07 1.26738e+07 0.0027598 1.62552e+07 50.1868 0.00392978 0.996115 0 50.0606 GTEX-12BJ1-0526-SM-5FQUD 1 B1 2 pieces, unusually well preserved, all cortex, minimal fat 7.9 Adrenal Gland Adrenal Gland 0002369 112 1013 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.989132 275336 0.97752 0.992888 0.840965 22451 1 76 0.0021001 201 0 7.54859e+07 0.0220401 1.0943e+06 7.60266e+07 1.03064e+07 22470 3.75183e+07 0 0.136555 0.992888 0.834984 7.54859e+07 0.00349434 1.67035e+07 9.69633e+06 1.66786e+07 215 1.67126e+07 1.26877e+07 0.00279458 1.69307e+07 50.3241 0.0143936 0.996644 0 49.9628 GTEX-12BJ1-0726-SM-5EGGF 1 B1 2 pieces, moderate congestion 6.3 Spleen Spleen 0002106 114 1011 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.979942 268470 0.962021 0.98566 0.789859 23789 1 76 0.00266071 135 0 6.864e+07 0.0372313 428269 6.96386e+07 1.15443e+07 23814 3.40195e+07 0 0.172162 0.98566 0.778533 6.864e+07 0.00608417 1.49374e+07 1.08843e+07 1.50796e+07 161 1.5168e+07 1.01361e+07 0.00436251 1.52176e+07 50.0815 0.00614988 0.991379 0 50.2368 GTEX-12BJ1-0826-SM-5EQ5P 1 B1 2 pieces, fat appears underfixed (not relevant to -26 aliquots) 7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 117 1008 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.991501 222596 0.97815 0.993664 0.835312 21413 1 76 0.00184733 150 0 6.27825e+07 0.0215992 587618 6.31829e+07 7.40784e+06 21425 3.12542e+07 0 0.142838 0.993664 0.830019 6.27825e+07 0.00286662 1.38455e+07 6.74383e+06 1.38995e+07 166 1.38416e+07 9.92336e+06 0.00235587 1.40302e+07 50.3383 0.00930028 0.995827 0 50.0973 GTEX-12BJ1-0926-SM-5EQ62 1 B1 6 pieces, focal adherent dermal fat up to ~0.5mm; squamous epithelium is ~40-50 microns 6.2 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 120 1005 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.990196 222200 0.973126 0.992845 0.810371 22752 1 76 0.0018839 142 0 5.98594e+07 0.0266975 680389 6.02907e+07 7.12720e+06 22770 2.97766e+07 0 0.162755 0.992845 0.804573 5.98594e+07 0.00302106 1.32505e+07 6.92073e+06 1.32923e+07 154 1.32485e+07 9.17539e+06 0.00245096 1.34439e+07 50.3661 0.0112851 0.995494 0 50.0788 GTEX-12BJ1-1026-SM-5EGJA 1 B1 2 pieces, mild peribronchial inflammation (chronic), delineated 8.8 Lung Lung 0008952 126 999 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.990134 401786 0.969212 0.992846 0.796511 24251 1 76 0.00192567 274 0 9.22192e+07 0.0304618 364246 9.28837e+07 8.35701e+06 24287 4.58781e+07 0 0.172702 0.992846 0.790813 9.22192e+07 0.00286207 2.02533e+07 1.08102e+07 2.04874e+07 264 2.05312e+07 1.6175e+07 0.00239259 2.04466e+07 49.8968 0.00392153 0.995558 0 50.2873 GTEX-12BJ1-1126-SM-5EGGG 1 B1 2 pieces, well preserved, Islets well- visualized; rep ones delineated 6.3 Pancreas Pancreas 0001150 128 997 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.984892 234691 0.978756 0.989504 0.85871 20802 1 76 0.00262201 97 0 6.92537e+07 0.0209398 171595 6.99883e+07 1.0343e+07 20814 3.4387e+07 0 0.120046 0.989504 0.849697 6.92537e+07 0.0057002 1.5891e+07 2.25652e+07 1.60854e+07 107 1.61211e+07 2.10711e+07 0.00415393 1.61771e+07 50.0867 0.00245177 0.994116 0 50.3039 GTEX-12BJ1-1226-SM-5LUAE 1 B1 2 pieces, glandular epithelial hyperplasia, well -preserved. 8.3 Prostate Prostate 0002367 129 996 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.99135 316650 0.970131 0.993258 0.793762 24323 1 76 0.00432667 142 0 7.41709e+07 0.0294921 253841 7.46743e+07 6.40646e+06 24354 3.69001e+07 0 0.176369 0.993258 0.788411 7.41709e+07 0.00346668 1.61404e+07 6.66126e+06 1.62225e+07 153 1.62288e+07 1.36201e+07 0.0038975 1.62716e+07 50.0658 0.00339931 0.995167 0 50.1267 GTEX-12BJ1-1326-SM-5BC5P 1 B1 2 pieces, well preserved. Spermatogenesis is present but appears reduced 6.3 Testis Testis 0000473 141 984 BP-43916 RNA Extraction from Paxgene-derived Lysate Plate Based 09/24/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.987413 302919 0.945757 0.991457 0.762216 30068 1 76 0.00263688 135 0 6.69268e+07 0.0539604 805825 6.75034e+07 1.5543e+07 30106 3.32518e+07 0 0.183541 0.991457 0.755704 6.69268e+07 0.00453667 1.44488e+07 8.94397e+06 1.44638e+07 145 1.45478e+07 1.05657e+07 0.0035829 1.46131e+07 50.112 0.0119375 0.995501 0 50.0261 GTEX-12BJ1-1426-SM-5BC5Q 1 B1 6 pieces, all muscularis, good specimens 7.2 Esophagus Esophagus - Muscularis 0004648 141 984 BP-43916 RNA Extraction from Paxgene-derived Lysate Plate Based 09/24/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.988886 311772 0.979699 0.992761 0.86065 21403 1 76 0.00247784 173 0 7.52876e+07 0.0200247 513052 7.58366e+07 2.18224e+07 21415 3.74152e+07 0 0.119049 0.992761 0.854419 7.52876e+07 0.00429448 1.63772e+07 8.20477e+06 1.65252e+07 194 1.65628e+07 1.3927e+07 0.00338261 1.66126e+07 50.075 0.00676523 0.996635 0 50.225 GTEX-12BJ1-1526-SM-5LUAQ 1 B1 6 pieces, all muscularis 8 Esophagus Esophagus - Gastroesophageal Junction 0004550 143 982 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.99212 224901 0.97684 0.993977 0.846991 21159 1 76 0.00427045 133 0 5.86885e+07 0.0228696 470806 5.90441e+07 5.02992e+06 21170 2.92014e+07 0 0.129849 0.993977 0.841889 5.86885e+07 0.00348537 1.2677e+07 5.48458e+06 1.27749e+07 140 1.27315e+07 1.04087e+07 0.00387864 1.28271e+07 50.1869 0.00797381 0.995835 0 50.1923 GTEX-12BJ1-1626-SM-5HL8Y 1 B1 6 pieces, squamous mucosa is ~0.5mm thick, ~20% total; a few submucosal mucus glands noted, delineated 9.1 Esophagus Esophagus - Mucosa 0006920 144 981 BP-45268 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.989409 311803 0.975015 0.992305 0.823615 22159 1 76 0.00211813 170 0 7.19694e+07 0.024655 360242 7.25274e+07 6.19482e+06 22174 3.58005e+07 0 0.1514 0.992305 0.817277 7.19694e+07 0.00322269 1.60714e+07 9.91669e+06 1.61883e+07 170 1.61988e+07 1.39226e+07 0.0026688 1.62591e+07 50.0929 0.00496698 0.995202 0 50.1813 GTEX-12BJ1-1726-SM-5HL9B 1 B1 6 pieces, well preserved mucoa; patchy acute/active gastritis with leukocytes in deep mucosa and submucosa, rep foci delineated. Mucosa up to ~0.5-0.7mm thick, ~20% total 7.3 Stomach Stomach 0000945 150 975 BP-45268 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.985432 251516 0.978896 0.988927 0.847668 22735 1 76 0.00205153 291 0 8.21964e+07 0.0206695 479995 8.31168e+07 7.55938e+06 22753 4.08588e+07 0 0.131228 0.988927 0.838282 8.21964e+07 0.00325638 1.85886e+07 6.20700e+07 1.90087e+07 230 1.9062e+07 1.98898e+07 0.00265183 1.88134e+07 49.6717 0.00577495 0.992421 0 50.5587 GTEX-12BJ1-1826-SM-5HL9N 0 B1 2 pieces, fibroadipose tissue, no ductal elements noted 7.6 Breast Breast - Mammary Tissue 0008367 152 973 BP-45268 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.988611 264521 0.978059 0.991974 0.830502 22891 1 76 0.00201328 209 0 8.12181e+07 0.0216218 411715 8.18752e+07 8.08148e+06 22915 4.03849e+07 0 0.147556 0.991974 0.823837 8.12181e+07 0.00308531 1.78928e+07 8.31495e+06 1.8023e+07 238 1.80325e+07 1.46556e+07 0.00254748 1.8139e+07 50.1472 0.00502857 0.995337 0 50.1813 GTEX-12BJ1-1926-SM-5HL9Z 1 B1 6 pieces, well preserved, good lymphoid aggregates, ~40% total tisssue; rep foci delineated 7.1 Small Intestine Small Intestine - Terminal Ileum 0001211 162 963 BP-45268 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.989428 277350 0.965217 0.99176 0.764592 25352 1 76 0.00219128 276 0 9.23968e+07 0.0344719 538180 9.31645e+07 7.82451e+06 25396 4.5984e+07 0 0.200626 0.99176 0.758292 9.23968e+07 0.00307892 2.01765e+07 1.2541e+07 2.04759e+07 268 2.03897e+07 1.26021e+07 0.00263406 2.0452e+07 50.0762 0.00577667 0.994093 0 50.3683 GTEX-12BJ1-2026-SM-5FQUH 1 B1 6 pieces, all muscularis, trace 'contaminant' mucosa; good specimens 7.5 Colon Colon - Sigmoid 0001159 166 959 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.991378 222911 0.976719 0.993803 0.847613 21716 1 76 0.00197781 213 0 7.53497e+07 0.0229529 456311 7.58196e+07 9.09172e+06 21732 3.75111e+07 0 0.129106 0.993803 0.84236 7.53497e+07 0.00298427 1.63528e+07 7.48535e+06 1.62911e+07 217 1.63042e+07 1.41688e+07 0.00247981 1.65116e+07 50.3159 0.00601838 0.996227 0 49.9055 GTEX-12BJ1-2126-SM-5BC5O 1 B1 6 pieces, well preserved mucosa up to ~40-50% thickness 5.9 Colon Colon - Transverse 0001157 171 954 BP-43916 RNA Extraction from Paxgene-derived Lysate Plate Based 09/24/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.988872 246135 0.974731 0.992357 0.827173 22832 1 76 0.00269046 206 0 7.65216e+07 0.0246989 1.27381e+06 7.71109e+07 1.98349e+07 22858 3.80318e+07 0 0.147558 0.992357 0.820851 7.65216e+07 0.0047292 1.70332e+07 1.25993e+07 1.69951e+07 223 1.69532e+07 1.06822e+07 0.00370625 1.73121e+07 50.5237 0.0165192 0.995842 0 49.944 GTEX-12BJ1-2226-SM-5BC6G 1 B1 2 pieces,j ~40% glandular tissue (rep foci delineated), rest is squamous mucosa/muscle/stroma 9.4 Salivary Gland Minor Salivary Gland 0006330 182 943 BP-43916 RNA Extraction from Paxgene-derived Lysate Plate Based 09/24/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.988843 323606 0.975937 0.99243 0.815103 23008 1 76 0.00268334 174 0 8.18523e+07 0.0236229 259931 8.24766e+07 1.95227e+07 23028 4.06896e+07 0 0.160834 0.99243 0.808933 8.18523e+07 0.00472955 1.81761e+07 1.34135e+07 1.82907e+07 189 1.83827e+07 1.60353e+07 0.00370275 1.8363e+07 49.9732 0.00315157 0.996017 0 50.1571 GTEX-12BJ1-2526-SM-5FQUE 0 B1 2 pieces, minimal interstitial fat 7.9 Muscle Muscle - Skeletal 0011907 306 819 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.989924 236552 0.981792 0.993157 0.870984 19517 1 76 0.00191716 166 0 7.0982e+07 0.0179569 615871 7.14711e+07 1.01088e+07 19524 3.5314e+07 0 0.110808 0.993157 0.865025 7.0982e+07 0.00307068 1.55599e+07 1.01536e+07 1.52967e+07 187 1.53425e+07 1.50782e+07 0.00249204 1.57241e+07 50.6142 0.00861706 0.996391 0 49.5735 GTEX-12BJ1-2626-SM-5FQUF 0 B1 4 pieces, clean specimens, no adherent fat 6.5 Nerve Nerve - Tibial 0001323 309 816 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.989029 212731 0.971599 0.992288 0.785669 23131 1 76 0.0021615 153 0 6.86853e+07 0.0281024 297409 6.92191e+07 9.25238e+06 23161 3.41468e+07 0 0.18593 0.992288 0.77961 6.86853e+07 0.00361354 1.50867e+07 6.30565e+06 1.51786e+07 160 1.52005e+07 1.15277e+07 0.00288514 1.52758e+07 50.1234 0.00429664 0.995547 0 50.152 GTEX-12BJ1-2726-SM-5HL9M 0 B1 2 pieces, rim of adherent fibrous tissue, up to ~1mm thick, delineated, generally good specimens 6.7 Blood Vessel Artery - Tibial 0007610 311 814 BP-45268 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.990171 248899 0.973233 0.992722 0.824043 22110 1 76 0.00200183 169 0 8.05426e+07 0.0263686 390855 8.11331e+07 7.53565e+06 22133 4.006e+07 0 0.149189 0.992722 0.818046 8.05426e+07 0.00292326 1.73445e+07 6.58233e+06 1.7425e+07 199 1.74176e+07 1.51953e+07 0.00246136 1.75457e+07 50.1831 0.00481745 0.995272 0 50.1158 GTEX-12BJ1-5001-SM-AN3X8 B1 Heart Heart - Left Ventricle 0006566 104 ChIP-Seq GTEX-12BJ1-5022-SM-AN3XA B1 Muscle Muscle - Skeletal 0011907 307 ChIP-Seq GTEX-12C56-0002-SM-5S2PC B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -56 BP-45438 RNA isolation_Trizol Manual (Cell Pellet) 11/04/2013 LCSET-4988 04/01/2014 TruSeq.v1 RNASEQ 0.992633 805183 0.958753 0.993564 0.831466 19920 1 76 0.00201907 146 0 6.21508e+07 0.0400764 380740 6.25534e+07 3.37901e+06 19931 3.09478e+07 0 0.127287 0.993564 0.826115 6.21508e+07 0.00256092 1.36301e+07 1.32785e+07 1.37894e+07 144 1.37735e+07 1.34588e+07 0.00228974 1.37089e+07 49.8824 0.00608664 0.994496 0 50.2904 GTEX-12C56-0003-SM-5DU56 B1 Blood Whole Blood 0013756 -56 BP-41058 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/19/2013 LCSET-4834 02/16/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-12C56-0003-SM-7DRPT B1 Blood Whole Blood 0013756 -56 BP-41058 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/19/2013 LCSET-6341 01/12/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-12C56-0006-SM-5N9E9 B1 8.7 Blood Whole Blood 0013756 -56 BP-41053 RNA isolation_PAXgene Blood RNA (Manual) 07/19/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.966969 1.07642e+06 0.96652 0.968525 0.805586 19450 1 76 0.00405116 196 0 1.2342e+08 0.032823 257354 1.27431e+08 6.18599e+06 19466 6.13632e+07 0 0.160934 0.968525 0.78023 1.2342e+08 0.00414885 2.81842e+07 1.62412e+08 2.85716e+07 248 2.85896e+07 3.18522e+07 0.00409992 2.83728e+07 49.8097 0.00201955 0.970081 0 50.3413 GTEX-12C56-0008-SM-5TDC1 B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 246 BP-45552 RNA isolation_Trizol Manual (Cell Pellet) 11/06/2013 LCSET-5048 04/03/2014 TruSeq.v1 RNASEQ 0.991595 448837 0.979821 0.994201 0.881418 21075 1 76 0.00183712 282 0 1.08895e+08 0.0198853 238542 1.0953e+08 1.27631e+07 21085 5.41994e+07 0 0.098403 0.994201 0.876307 1.08895e+08 0.00332875 2.44638e+07 1.46901e+07 2.45151e+07 293 2.45626e+07 2.78949e+07 0.00258098 2.46989e+07 50.1384 0.00217787 0.996807 0 50.0524 GTEX-12C56-0226-SM-5N9FB 0 B1 6 pieces, attached adventitia, no lesions 5.7 Blood Vessel Artery - Aorta 0001496 178 1253 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.989809 333926 0.972018 0.990962 0.815645 23752 1 76 0.00374317 278 0 1.09718e+08 0.0276855 615969 1.10719e+08 5.39100e+06 23785 5.45389e+07 0 0.156373 0.990962 0.808274 1.09718e+08 0.00376187 2.37867e+07 9.50657e+06 2.39288e+07 323 2.38116e+07 1.90593e+07 0.00375251 2.40235e+07 50.2215 0.00556337 0.992116 0 50.1489 GTEX-12C56-0426-SM-5FQU1 0 B1 6 pieces, predominantly well trimmed, but with two small strips of squamous mucosa 7.3 Esophagus Esophagus - Gastroesophageal Junction 0004550 191 1240 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.990587 310796 0.975896 0.993626 0.833642 22366 1 76 0.00200827 278 0 8.56562e+07 0.0238367 739517 8.62056e+07 1.10009e+07 22385 4.26079e+07 0 0.142254 0.993626 0.828328 8.56562e+07 0.00336896 1.85308e+07 9.40692e+06 1.86041e+07 265 1.86071e+07 1.49837e+07 0.00268654 1.87707e+07 50.2189 0.00857852 0.996666 0 50.0988 GTEX-12C56-0526-SM-5FQST 2 B1 6 pieces, mucosa, submucosa, and muscularis, mild acute gastritis, predominantly autolysis 1, focally 2 7.3 Stomach Stomach 0000945 193 1238 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.991303 199466 0.977459 0.993863 0.847355 22255 1 76 0.00199428 167 0 6.88477e+07 0.0222815 494946 6.92728e+07 9.07176e+06 22266 3.42688e+07 0 0.130105 0.993863 0.842154 6.88477e+07 0.00322326 1.50954e+07 6.9351e+06 1.51306e+07 178 1.51174e+07 1.25054e+07 0.00260719 1.52765e+07 50.2618 0.00714488 0.996423 0 50.0582 GTEX-12C56-0626-SM-5EGGC 2 B1 6 pieces, mucosa and muscularis 7.2 Colon Colon - Transverse 0001157 198 1233 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.974299 194325 0.971637 0.979084 0.793367 23486 1 76 0.00254455 139 0 6.34167e+07 0.0269788 782625 6.47714e+07 9.56045e+06 23516 3.14371e+07 0 0.17827 0.979084 0.776773 6.34167e+07 0.00553216 1.41531e+07 1.17042e+07 1.38958e+07 157 1.39406e+07 8.62924e+06 0.00403105 1.43855e+07 50.7854 0.0120829 0.98387 0 49.5413 GTEX-12C56-0826-SM-5EGJ5 1 B1 2 pieces, 10% is fibrous/vascular 8.3 Adipose Tissue Adipose - Visceral (Omentum) 0010414 201 1230 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.990945 275994 0.979419 0.993206 0.831208 22372 1 76 0.00161014 275 0 8.34581e+07 0.0203534 1.04544e+06 8.4029e+07 6.87043e+06 22386 4.15549e+07 0 0.148211 0.993206 0.82556 8.34581e+07 0.00254419 1.83929e+07 1.55863e+07 1.8463e+07 269 1.84114e+07 1.39062e+07 0.0020761 1.86175e+07 50.2782 0.0124414 0.995466 0 50.0951 GTEX-12C56-1126-SM-5FQTO 1 B1 6 pieces, well trimmed 7.4 Esophagus Esophagus - Muscularis 0004648 214 1217 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.990412 227450 0.97475 0.993118 0.830382 22393 1 76 0.00201951 214 0 8.17699e+07 0.0250087 675446 8.23365e+07 1.08317e+07 22411 4.06926e+07 0 0.144369 0.993118 0.824667 8.17699e+07 0.00333873 1.77246e+07 8.50503e+06 1.7792e+07 246 1.77585e+07 1.4038e+07 0.00267732 1.79648e+07 50.2887 0.00820348 0.995825 0 50.0948 GTEX-12C56-1226-SM-5FQSU 1 B1 4 pieces 9.8 Esophagus Esophagus - Mucosa 0006920 215 1216 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.986743 276821 0.976234 0.990371 0.83023 22512 1 76 0.0021654 215 0 8.4053e+07 0.0233332 416276 8.48702e+07 1.32543e+07 22528 4.17845e+07 0 0.146004 0.990371 0.822236 8.4053e+07 0.00341989 1.89636e+07 1.32181e+07 1.89529e+07 237 1.90245e+07 1.69691e+07 0.00279035 1.91821e+07 50.2062 0.00490486 0.994 0 49.9859 GTEX-12C56-1326-SM-5FQSV 0 B1 2 pieces, ~30% of each is fibrous/vascular/nerve 6.9 Prostate Prostate 0002367 223 1208 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.98698 331049 0.963135 0.990546 0.744012 25508 1 76 0.00228663 161 0 7.96001e+07 0.0366061 485876 8.03598e+07 1.03735e+07 25547 3.95526e+07 0 0.219123 0.990546 0.736978 7.96001e+07 0.00369633 1.73899e+07 9.31477e+06 1.75062e+07 190 1.75362e+07 1.06248e+07 0.00298894 1.76197e+07 50.1187 0.00604625 0.994111 0 50.1667 GTEX-12C56-1426-SM-5FQSW 2 B1 2 pieces, active spermatogenesis 7 Testis Testis 0000473 229 1202 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.989298 320458 0.929067 0.991614 0.736739 32853 1 76 0.00218886 215 0 8.31648e+07 0.070627 1.06781e+06 8.38681e+07 1.02506e+07 32918 4.13991e+07 0 0.192328 0.991614 0.730561 8.31648e+07 0.00322135 1.73738e+07 1.2812e+07 1.7273e+07 203 1.73293e+07 1.32194e+07 0.00270389 1.74876e+07 50.2273 0.012732 0.993931 0 49.8546 GTEX-12C56-1526-SM-5FQUQ 1 B1 6 pieces, some with up to 10% attached and intradermal fat 8 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 231 1200 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.99 238125 0.970772 0.992861 0.797488 25271 1 76 0.00210068 187 0 7.18678e+07 0.0289826 541412 7.23845e+07 8.90627e+06 25294 3.57487e+07 0 0.173284 0.992861 0.791795 7.18678e+07 0.00341635 1.56991e+07 8.26729e+06 1.57648e+07 171 1.57663e+07 1.25539e+07 0.00275662 1.58922e+07 50.1988 0.00747966 0.995723 0 50.1044 GTEX-12C56-1626-SM-5FQUO 1 B1 2 pieces, one includes ~20% stroma and sweat glands, second has region of hemorrhage 7.9 Adipose Tissue Adipose - Subcutaneous 0002190 239 1192 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.990357 575932 0.98004 0.993148 0.848208 25389 1 76 0.00203579 390 0 1.76645e+08 0.019659 826602 1.77864e+08 2.59849e+07 25427 8.79021e+07 0 0.131832 0.993148 0.842396 1.76645e+08 0.00316404 3.89452e+07 2.11596e+07 3.90899e+07 368 3.91558e+07 3.58982e+07 0.00259833 3.93465e+07 50.1215 0.00464739 0.995939 0 50.0927 GTEX-12C56-1726-SM-5EQ61 1 B1 6 pieces, up to 20% attached fat, squamous epithelium is 30-35 microns 6.6 Skin Skin - Sun Exposed (Lower leg) 0004264 241 1190 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.989159 319813 0.967061 0.992288 0.773228 24041 1 76 0.00195475 188 0 6.98213e+07 0.0327288 481478 7.0364e+07 8.75841e+06 24068 3.47144e+07 0 0.193833 0.992288 0.767265 6.98213e+07 0.00301087 1.51366e+07 8.72560e+06 1.52847e+07 168 1.52903e+07 1.10235e+07 0.00248115 1.53387e+07 50.0791 0.00684268 0.995417 0 50.2434 GTEX-12C56-1826-SM-5EQ6D 0 B1 2 pieces, no extraneous adipose tissue 6.8 Nerve Nerve - Tibial 0001323 249 1182 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.991405 252237 0.966558 0.993439 0.748289 24270 1 76 0.0019432 172 0 7.44979e+07 0.0331679 283475 7.49899e+07 8.24468e+06 24302 3.70817e+07 0 0.218269 0.993439 0.74338 7.44979e+07 0.00276843 1.62974e+07 6.65801e+06 1.64478e+07 174 1.64299e+07 1.15719e+07 0.00235497 1.64575e+07 50.042 0.00378017 0.995472 0 50.2295 GTEX-12C56-1926-SM-5FQUG 1 B1 2 pieces, includes portion of tendon 8.1 Muscle Muscle - Skeletal 0011907 250 1181 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.988853 261614 0.984629 0.992628 0.874471 19787 1 76 0.00184009 273 0 8.27583e+07 0.0151372 722139 8.33729e+07 1.32357e+07 19791 4.11511e+07 0 0.110158 0.992628 0.868025 8.27583e+07 0.00309755 1.81069e+07 1.42708e+07 1.80379e+07 256 1.80298e+07 1.64403e+07 0.00246642 1.83952e+07 50.5016 0.00866156 0.996403 0 49.9046 GTEX-12C56-2026-SM-5FQSI 1 B1 2 pieces, no extraneous adipose tissue 8.3 Blood Vessel Artery - Tibial 0007610 253 1178 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.989972 218697 0.976909 0.993127 0.874417 20608 1 76 0.00217639 211 0 8.04531e+07 0.0227142 388419 8.10099e+07 1.21745e+07 20616 4.00182e+07 0 0.102492 0.993127 0.868407 8.04531e+07 0.00343623 1.70432e+07 7.01572e+06 1.71685e+07 228 1.71736e+07 1.71176e+07 0.00280431 1.72753e+07 50.1476 0.00479471 0.996282 0 50.1831 GTEX-12KS4-0003-SM-5ANGF C1 Blood Whole Blood 0013756 342 BP-41344 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/25/2013 LCSET-4718 02/04/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-12KS4-0003-SM-5DWRE C1 Blood Whole Blood 0013756 342 BP-41344 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/25/2013 GTEx_OM25_Dec_01 01/29/2014 Illumina OMNI SNP Array OMNI GTEX-12KS4-0003-SM-7DRPS C1 Blood Whole Blood 0013756 342 BP-41344 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/25/2013 LCSET-6341 01/15/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-12KS4-0005-SM-5SI94 C1 9 Blood Whole Blood 0013756 342 BP-41341 RNA isolation_PAXgene Blood RNA (Manual) 07/25/2013 LCSET-5174 04/04/2014 TruSeq.v1 RNASEQ 0.984981 707481 0.965624 0.987675 0.769552 20393 1 76 0.00227617 123 0 7.70353e+07 0.0337604 170480 7.79966e+07 7.26934e+06 20407 3.83117e+07 0 0.196072 0.987675 0.760068 7.70353e+07 0.00370976 1.73877e+07 6.29621e+07 1.74132e+07 140 1.74478e+07 1.72249e+07 0.00299101 1.75805e+07 50.1894 0.00218574 0.99037 0 50.0366 GTEX-12KS4-0008-SM-664MC C1 9.9 Skin Cells - Cultured fibroblasts EFO_0002009 465 BP-45552 RNA isolation_Trizol Manual (Cell Pellet) 11/06/2013 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.993098 338142 0.980064 0.993708 0.880842 21121 1 76 0.00196743 289 0 1.17805e+08 0.0196165 538614 1.18551e+08 7.53107e+06 21139 5.86948e+07 0 0.0992219 0.993708 0.8753 1.17805e+08 0.00267929 2.64074e+07 1.37695e+07 2.65343e+07 329 2.64549e+07 2.95144e+07 0.00232314 2.65685e+07 50.1072 0.00454331 0.994317 0 50.1198 GTEX-12KS4-0126-SM-5Q5A5 1 C1 1 piece, gynecomastoid stromal hyperplasia; rep. duct elements delineated 6.2 Breast Breast - Mammary Tissue 0008367 447 1004 BP-45374 RNA Extraction from Paxgene-derived Lysate Plate Based 10/31/2013 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.990584 213401 0.975103 0.992967 0.806693 22346 1 76 0.0018214 166 0 7.37602e+07 0.0246168 959560 7.42826e+07 5.45748e+06 22367 3.67005e+07 0 0.16841 0.992967 0.80102 7.37602e+07 0.00287252 1.61362e+07 9.13866e+06 1.62643e+07 186 1.62354e+07 1.24094e+07 0.0023457 1.6334e+07 50.1514 0.0129177 0.995351 0 50.1976 GTEX-12KS4-0326-SM-5EQ41 0 C1 6 pieces, minimal dermal fat;squamous epithelium is ~50-6-microns 8.4 Skin Skin - Sun Exposed (Lower leg) 0004264 464 988 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.991183 397180 0.972409 0.993769 0.792308 23381 1 76 0.00196667 174 0 7.01207e+07 0.0272987 309908 7.05604e+07 8.59908e+06 23407 3.48742e+07 0 0.180101 0.993769 0.787371 7.01207e+07 0.00319888 1.52094e+07 8.86453e+06 1.54118e+07 163 1.54218e+07 1.24448e+07 0.00258117 1.5373e+07 49.9207 0.0043921 0.996355 0 50.3304 GTEX-12KS4-0426-SM-5EQMC 0 C1 2 pieces, ~15% fibrovascular/fascial tissue, rep delineated 7.4 Adipose Tissue Adipose - Subcutaneous 0002190 466 987 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.99051 180597 0.973904 0.992599 0.775831 23288 1 76 0.00207589 163 0 7.81625e+07 0.0257567 523759 7.87453e+07 1.0168e+07 23313 3.89102e+07 0 0.198073 0.992599 0.770089 7.81625e+07 0.00286769 1.71954e+07 8.74554e+06 1.71587e+07 202 1.71554e+07 1.2894e+07 0.00247096 1.73568e+07 50.2918 0.00665131 0.994689 0 49.9465 GTEX-12KS4-0626-SM-5PNY4 1 C1 6 pieces, atherosis up to ~0.4mm, rep delineated 5.7 Blood Vessel Artery - Aorta 0001496 483 971 BP-45374 RNA Extraction from Paxgene-derived Lysate Plate Based 10/31/2013 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.990614 176053 0.974194 0.991238 0.777358 22923 1 76 0.00326138 170 0 8.59102e+07 0.0254507 187068 8.66696e+07 2.60339e+06 22949 4.27445e+07 0 0.196835 0.991238 0.770547 8.59102e+07 0.00379832 1.86569e+07 7.22655e+06 1.87412e+07 192 1.86631e+07 1.45951e+07 0.00352968 1.87922e+07 50.1723 0.0021584 0.991862 0 50.1126 GTEX-12KS4-0726-SM-5FQSX 2 C1 2 pieces, moderate congestion 6.2 Lung Lung 0008952 485 969 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.987686 260994 0.976046 0.991457 0.786282 23570 1 76 0.0023215 139 0 7.2701e+07 0.0236906 163916 7.33274e+07 1.05008e+07 23591 3.61183e+07 0 0.189763 0.991457 0.779566 7.2701e+07 0.00375906 1.60234e+07 7.68121e+06 1.61701e+07 162 1.62101e+07 1.27026e+07 0.00303755 1.62484e+07 50.059 0.0022354 0.995228 0 50.2279 GTEX-12KS4-0826-SM-5BC5R 0 C1 2 pieces, fewfoci of interstiital fat, rep. delineated 6.5 Muscle Muscle - Skeletal 0011907 491 964 BP-43916 RNA Extraction from Paxgene-derived Lysate Plate Based 09/24/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.987029 298487 0.984548 0.991616 0.859435 19741 1 76 0.0024759 154 0 7.36173e+07 0.0152275 916202 7.42397e+07 2.18735e+07 19751 3.65596e+07 0 0.125113 0.991616 0.85223 7.36173e+07 0.00465518 1.60499e+07 1.07954e+07 1.59016e+07 174 1.59801e+07 1.43001e+07 0.0035605 1.6273e+07 50.4541 0.0123411 0.996203 0 49.7679 GTEX-12KS4-0926-SM-5BC5S 1 C1 6 pieces, squamous mucosa is ~0.2mm, ~15% thickness. Focally early superficial sloughing is beginning (ie, early score'2;) 6.4 Esophagus Esophagus - Mucosa 0006920 492 963 BP-43916 RNA Extraction from Paxgene-derived Lysate Plate Based 09/24/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.985994 265544 0.973513 0.990872 0.756335 23168 1 76 0.0026931 132 0 6.74932e+07 0.0262133 237022 6.8115e+07 1.74701e+07 23195 3.34903e+07 0 0.217178 0.990872 0.749431 6.74932e+07 0.00564301 1.50465e+07 8.63374e+06 1.52098e+07 146 1.53119e+07 1.09768e+07 0.00416079 1.52655e+07 49.9241 0.00347973 0.995749 0 50.2698 GTEX-12KS4-1026-SM-5FQTD 1 C1 6 pieces, all muscularis 7.1 Esophagus Esophagus - Muscularis 0004648 494 962 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.989336 196153 0.972481 0.992299 0.773942 24325 1 76 0.00227028 134 0 6.54211e+07 0.0272991 475907 6.59289e+07 9.06852e+06 24355 3.25322e+07 0 0.198539 0.992299 0.767982 6.54211e+07 0.00372955 1.42181e+07 6.05683e+06 1.4307e+07 146 1.43304e+07 1.05756e+07 0.00299774 1.43769e+07 50.081 0.00721849 0.995262 0 50.1559 GTEX-12KS4-1126-SM-5FQUI 0 C1 2 pieces, good specimens, one section with ~0.5mm rim of fat along one edge, delineated 5.8 Nerve Nerve - Tibial 0001323 496 960 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.987766 200325 0.96736 0.99149 0.746555 23937 1 76 0.00228778 144 0 6.81716e+07 0.0323611 311198 6.87567e+07 1.03176e+07 23966 3.38726e+07 0 0.220805 0.99149 0.740202 6.81716e+07 0.00378924 1.49236e+07 7.10876e+06 1.50293e+07 151 1.50652e+07 1.03512e+07 0.00303569 1.51278e+07 50.1036 0.00452608 0.995215 0 50.1764 GTEX-12KS4-1326-SM-5LUB3 1 C1 2 pieces moderate passive congestion 6 Liver Liver 0001114 500 957 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.990923 326664 0.972361 0.993073 0.831911 21272 1 76 0.00449944 139 0 6.54767e+07 0.0269981 1.08188e+06 6.59335e+07 5.73048e+06 21287 3.25362e+07 0 0.14045 0.993073 0.826148 6.54767e+07 0.00378483 1.41486e+07 1.13278e+07 1.41821e+07 159 1.4161e+07 1.03312e+07 0.00414291 1.43101e+07 50.2617 0.0164086 0.995223 0 50.059 GTEX-12KS4-1526-SM-5EQ6E 1 C1 2 pieces, minimal fibrous or vascular tissue, go specimens 7.1 Adipose Tissue Adipose - Visceral (Omentum) 0010414 506 953 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.990716 313472 0.97926 0.993031 0.760218 22519 1 76 0.00206125 163 0 7.34723e+07 0.0204354 730885 7.39879e+07 8.49793e+06 22548 3.65522e+07 0 0.219043 0.993031 0.75492 7.34723e+07 0.0031034 1.6357e+07 9.41854e+06 1.64614e+07 173 1.6485e+07 1.14608e+07 0.00258111 1.65e+07 50.0226 0.00987844 0.995346 0 50.1589 GTEX-12KS4-2126-SM-5FQUT 0 C1 6 pieces, minimal dermal fat, squamous epithelium is 30-50 microns 7.9 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 536 926 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.989147 233732 0.974972 0.992341 0.776485 23641 1 76 0.00226564 151 0 6.61259e+07 0.0247648 424386 6.66363e+07 9.88448e+06 23667 3.28811e+07 0 0.198487 0.992341 0.770538 6.61259e+07 0.00360275 1.4538e+07 8.36815e+06 1.45883e+07 147 1.46296e+07 1.14509e+07 0.00293204 1.4697e+07 50.115 0.00636869 0.995535 0 50.0864 GTEX-12KS4-2326-SM-5EGJB 1 C1 6 pieces, all muscularis 6.8 Colon Colon - Sigmoid 0001159 543 920 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.989565 328663 0.968621 0.992532 0.756544 24354 1 76 0.00193929 277 0 9.39327e+07 0.0311185 515677 9.46394e+07 8.19294e+06 24391 4.66943e+07 0 0.212077 0.992532 0.750894 9.39327e+07 0.00303961 2.01042e+07 8.93e+06 2.03049e+07 258 2.03123e+07 1.47736e+07 0.00248781 2.0359e+07 50.0573 0.00544886 0.995499 0 50.2484 GTEX-12KS4-2426-SM-5LU8P 2 C1 6 pieces, mucosa is ~0.3mm thick, moderately-severely autolyzed 6.1 Colon Colon - Transverse 0001157 546 917 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.988665 330334 0.969359 0.990783 0.748892 24510 1 76 0.00495414 135 0 6.88211e+07 0.0292442 637297 6.94613e+07 6.03295e+06 24544 3.41449e+07 0 0.220467 0.990783 0.741989 6.88211e+07 0.00433897 1.5081e+07 7.75665e+06 1.51353e+07 151 1.5139e+07 9.42486e+06 0.00464721 1.52242e+07 50.1403 0.00917485 0.9929 0 50.0899 GTEX-12WS9-0001-SM-5DU63 C1 Blood Whole Blood 0013756 450 BP-41501 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/30/2013 LCSET-4834 02/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-12WS9-0001-SM-7DRQ3 C1 Blood Whole Blood 0013756 450 BP-41501 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/30/2013 LCSET-6341 01/12/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) EXCLUDE GTEX-12WS9-0006-SM-5O99W C1 7.2 Blood Whole Blood 0013756 450 BP-41459 RNA isolation_PAXgene Blood RNA (Manual) 07/29/2013 LCSET-4909 03/20/2014 TruSeq.v1 EXCLUDE 0.981177 648262 0.972139 0.984895 0.822311 19001 1 76 0.00236918 144 0 9.30072e+07 0.0273481 363577 9.44337e+07 1.28292e+07 19009 4.61883e+07 0 0.149828 0.984895 0.80989 9.30072e+07 0.00434736 2.11069e+07 8.7489e+07 2.12e+07 168 2.12176e+07 2.22021e+07 0.00335454 2.14576e+07 50.2811 0.00385008 0.988614 0 50.11 GTEX-12WS9-0008-SM-5TDC2 C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 497 BP-45552 RNA isolation_Trizol Manual (Cell Pellet) 11/06/2013 LCSET-5048 04/03/2014 TruSeq.v1 EXCLUDE 0.991775 339632 0.979844 0.9943 0.878314 20711 1 76 0.0019391 213 0 9.09587e+07 0.0198975 247700 9.14801e+07 1.06265e+07 20727 4.52797e+07 0 0.10153 0.9943 0.873308 9.09587e+07 0.00348649 2.04231e+07 1.26543e+07 2.046e+07 249 2.04945e+07 2.33867e+07 0.00271083 2.06159e+07 50.1477 0.00270769 0.996825 0 50.0452 GTEX-12WS9-0011-R10a-SM-57WBV C1, A1 6.1 Brain Brain - Frontal Cortex (BA9) 0009834 451 BP-43579 RNA isolation_PAXgene Tissue miRNA 09/16/2013 LCSET-4415 12/21/2013 TruSeq.v1 EXCLUDE 0.988887 596477 0.956934 0.991985 0.82679 22318 1 76 0.00221574 196 0 6.95507e+07 0.0428518 4.73628e+06 7.01126e+07 8.98067e+06 22330 3.45692e+07 0 0.130144 0.991985 0.820163 6.95507e+07 0.00388089 1.51983e+07 1.40328e+07 1.53492e+07 210 1.51885e+07 7.12546e+06 0.00304571 1.55584e+07 50.6015 0.0675525 0.995083 0 50.2469 GTEX-12WS9-0011-R2a-SM-5CVNE C1, A1 8.7 Brain Brain - Substantia nigra 0002038 451 BP-43681 RNA isolation_PAXgene Tissue miRNA 09/17/2013 LCSET-4633 02/15/2014 TruSeq.v1 EXCLUDE 0.986997 262468 0.97379 0.990424 0.836183 21545 1 76 0.00543533 201 0 7.75161e+07 0.0260821 9.56879e+06 7.82655e+07 1.39392e+07 21554 3.8516e+07 0 0.137606 0.990424 0.828176 7.75161e+07 0.00745532 1.69402e+07 3.10976e+07 1.70929e+07 247 1.66611e+07 5.50774e+06 0.00644183 1.75628e+07 51.3173 0.122261 0.993852 0 50.2243 GTEX-12WS9-0011-R3a-SM-5CVNF C1, A1 6.8 Brain Brain - Anterior cingulate cortex (BA24) 0009835 451 BP-43681 RNA isolation_PAXgene Tissue miRNA 09/17/2013 LCSET-4633 02/15/2014 TruSeq.v1 EXCLUDE 0.984557 412819 0.966125 0.989688 0.846628 22107 1 76 0.00526537 150 0 6.71239e+07 0.0336632 6.63873e+06 6.78232e+07 1.24636e+07 22115 3.32828e+07 0 0.119497 0.989688 0.837898 6.71239e+07 0.00811428 1.47329e+07 2.30299e+07 1.47324e+07 176 1.46707e+07 5.68462e+06 0.00668244 1.50764e+07 50.6818 0.0978828 0.99482 0 49.9992 GTEX-12WS9-0011-R4b-SM-5P9EU C1, A1 6.1 Brain Brain - Amygdala 0001876 451 BP-43965 RNA isolation_PAXgene Tissue miRNA 09/25/2013 LCSET-4914 03/27/2014 TruSeq.v1 EXCLUDE 0.987487 757201 0.967468 0.988171 0.815318 22576 1 76 0.00358263 371 0 1.3143e+08 0.0324176 2.09431e+07 1.33003e+08 4.48214e+06 22590 6.54298e+07 0 0.152151 0.988171 0.805673 1.3143e+08 0.00429668 2.78791e+07 8.45844e+07 2.90841e+07 406 2.82623e+07 7.45383e+06 0.00393941 2.87681e+07 50.4434 0.157463 0.988855 0 51.0577 GTEX-12WS9-0011-R5b-SM-5P9EV C1, A1 7.8 Brain Brain - Caudate (basal ganglia) 0001873 451 BP-43965 RNA isolation_PAXgene Tissue miRNA 09/25/2013 LCSET-4914 03/27/2014 TruSeq.v1 EXCLUDE 0.989922 924909 0.960435 0.990313 0.811177 24721 1 76 0.00320477 374 0 1.35479e+08 0.0393014 8.85664e+06 1.36804e+08 4.31279e+06 24744 6.74703e+07 0 0.149259 0.990313 0.803319 1.35479e+08 0.00382339 2.8929e+07 6.17724e+07 2.95055e+07 367 2.91166e+07 1.43257e+07 0.00351396 2.93924e+07 50.2357 0.0647397 0.990704 0 50.4933 GTEX-12WS9-0011-R6a-SM-5P9EW C1, A1 7.3 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 451 BP-43965 RNA isolation_PAXgene Tissue miRNA 09/25/2013 LCSET-4914 03/27/2014 TruSeq.v1 EXCLUDE 0.989874 895270 0.96035 0.990276 0.812726 25020 1 76 0.00329955 376 0 1.51985e+08 0.039431 1.32948e+07 1.53478e+08 5.13397e+06 25047 7.57112e+07 0 0.147624 0.990276 0.804823 1.51985e+08 0.00383452 3.23326e+07 6.50346e+07 3.33353e+07 372 3.28491e+07 1.40573e+07 0.00356692 3.28771e+07 50.0213 0.0866237 0.990678 0 50.7635 GTEX-12WS9-0126-SM-5EGL7 0 C1 6 pieces, no dermal fat; squamous epithelium is ~50 microns 8.4 Skin Skin - Sun Exposed (Lower leg) 0004264 496 1193 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 EXCLUDE 0.989225 246726 0.981282 0.99202 0.829865 21109 1 76 0.00201481 171 0 6.55002e+07 0.0184505 210232 6.60271e+07 5.96178e+06 21128 3.25789e+07 0 0.151417 0.99202 0.823243 6.55002e+07 0.00299938 1.43884e+07 7.9291e+06 1.45004e+07 156 1.45436e+07 1.2583e+07 0.00250571 1.45204e+07 49.9601 0.00318402 0.994815 0 50.1939 GTEX-12WS9-0226-SM-5EQ4X 0 C1 2 pieces, ~10% fibrovascular elements, rep. delineated 6.5 Adipose Tissue Adipose - Subcutaneous 0002190 498 1192 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4767 02/09/2014 TruSeq.v1 EXCLUDE 0.989897 266663 0.976357 0.992879 0.797261 21150 1 76 0.00208235 132 0 6.32663e+07 0.0234125 348390 6.37201e+07 8.20466e+06 21169 3.14473e+07 0 0.179097 0.992879 0.791584 6.32663e+07 0.00313894 1.38024e+07 7.00715e+06 1.3884e+07 150 1.388e+07 1.04106e+07 0.00260906 1.3986e+07 50.19 0.00546751 0.995862 0 50.1474 GTEX-12WS9-0326-SM-59HJV 0 C1 6 pieces, minimal dermal fat (delineated); squamous epithelium is ~50-60microns 7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 501 1189 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4419 01/14/2014 TruSeq.v1 EXCLUDE 0.982394 216501 0.980625 0.988796 0.783919 21431 1 76 0.00247692 129 0 5.79215e+07 0.0191981 481574 5.85777e+07 9.95970e+06 21446 2.86947e+07 0 0.196706 0.988796 0.775136 5.79215e+07 0.00881836 1.28591e+07 7.76884e+06 1.29844e+07 125 1.31031e+07 1.02246e+07 0.00562711 1.31016e+07 49.9972 0.00822111 0.995199 0 50.2424 GTEX-12WS9-0426-SM-59HJW 0 C1 2 pieces, trace adherent fat up to ~0.2mm focally, delineated 7.1 Nerve Nerve - Tibial 0001323 503 1188 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4419 01/14/2014 TruSeq.v1 EXCLUDE 0.983001 224728 0.970793 0.98901 0.745089 23418 1 76 0.00256432 146 0 7.26287e+07 0.0289861 253070 7.34357e+07 1.44715e+07 23445 3.60056e+07 0 0.225703 0.98901 0.736901 7.26287e+07 0.00873808 1.59159e+07 7.89159e+06 1.60451e+07 149 1.61766e+07 1.1134e+07 0.00563245 1.61935e+07 50.0261 0.00344614 0.99502 0 50.2021 GTEX-12WS9-0526-SM-5FQT5 0 C1 2 pieces, clean specimens 7.4 Blood Vessel Artery - Tibial 0007610 505 1186 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4793 02/19/2014 TruSeq.v1 EXCLUDE 0.988885 186779 0.976442 0.991969 0.834309 20856 1 76 0.002205 139 0 6.81437e+07 0.0232857 325885 6.86954e+07 1.03217e+07 20874 3.38914e+07 0 0.142133 0.991969 0.827609 6.81437e+07 0.00349018 1.4883e+07 7.40911e+06 1.494e+07 162 1.49663e+07 1.30132e+07 0.00284559 1.50574e+07 50.1518 0.00474391 0.995054 0 50.0957 GTEX-12WS9-0626-SM-5FQT2 0 C1 2 pieces, ~10% interstitial fibroadipose/vascular tissue, rep delineated 8.3 Muscle Muscle - Skeletal 0011907 507 1185 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4793 02/19/2014 TruSeq.v1 EXCLUDE 0.986079 200084 0.982905 0.988742 0.867952 18903 1 76 0.00226341 221 0 7.35793e+07 0.0169011 843670 7.4417e+07 1.05312e+07 18911 3.66215e+07 0 0.114953 0.988742 0.858181 7.35793e+07 0.00340773 1.64062e+07 1.11546e+07 1.62369e+07 209 1.63107e+07 1.48255e+07 0.00283403 1.65122e+07 50.3069 0.0113371 0.991406 0 49.7408 GTEX-12WS9-0726-SM-5FQT7 1 C1 2 pieces, no abornmalities 6.5 Thyroid Thyroid 0002046 509 1183 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4793 02/19/2014 TruSeq.v1 EXCLUDE 0.987804 245695 0.967101 0.991366 0.748611 23370 1 76 0.00231259 158 0 7.77159e+07 0.0326602 291731 7.83927e+07 1.12227e+07 23407 3.86219e+07 0 0.21849 0.991366 0.742147 7.77159e+07 0.00372842 1.6955e+07 8.13396e+06 1.71218e+07 170 1.71748e+07 1.20904e+07 0.00301796 1.71674e+07 49.9892 0.00372141 0.994928 0 50.2447 GTEX-12WS9-0826-SM-59HJX 1 C1 2 pieces, no abnormalities; incedental 'contaminating' fragment of lymph node ? mediastinal, encircled 6.5 Heart Heart - Atrial Appendage 0006631 510 1183 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4419 01/14/2014 TruSeq.v1 EXCLUDE 0.982123 241746 0.981506 0.988095 0.838853 22382 1 76 0.00253629 161 0 8.48206e+07 0.0182533 1.90067e+06 8.58425e+07 1.56557e+07 22398 4.2058e+07 0 0.142653 0.988095 0.828866 8.48206e+07 0.00902773 1.85442e+07 1.09359e+07 1.86405e+07 201 1.87698e+07 1.50795e+07 0.00576239 1.88809e+07 50.1476 0.0221413 0.994068 0 50.1296 GTEX-12WS9-1426-SM-5FQT3 2 C1 "6 pieces, mucosa up to 1mm thick;30-90 % of thickness but badly autolyzed, in some foci a ""3""" 5.8 Stomach Stomach 0000945 523 1174 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4793 02/19/2014 TruSeq.v1 EXCLUDE 0.986618 233628 0.975815 0.990752 0.786782 22866 1 76 0.00233129 207 0 8.39543e+07 0.023945 666918 8.47379e+07 1.27124e+07 22889 4.16979e+07 0 0.189033 0.990752 0.779506 8.39543e+07 0.00399986 1.8418e+07 9.77734e+06 1.85759e+07 205 1.86437e+07 1.43231e+07 0.00316209 1.86812e+07 50.0502 0.00787036 0.994887 0 50.2135 GTEX-12WS9-1526-SM-5FQT4 1 C1 6 pieces, squamous mucosa is 5% thickness, sloughed in some areas 6.2 Esophagus Esophagus - Mucosa 0006920 525 1173 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4793 02/19/2014 TruSeq.v1 EXCLUDE 0.987469 269553 0.971194 0.990822 0.772792 22802 1 76 0.00226422 148 0 7.09896e+07 0.0286435 213255 7.16472e+07 9.41515e+06 22825 3.52603e+07 0 0.198402 0.990822 0.7657 7.09896e+07 0.00383028 1.5627e+07 1.12555e+07 1.58241e+07 153 1.58046e+07 1.27557e+07 0.0030446 1.58833e+07 50.1242 0.00297646 0.994175 0 50.3134 GTEX-12WS9-2826-SM-5FQU9 1 C1 4 pieces, no abnormalities 6.3 Brain Brain - Cerebellum 0002037 572 1137 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4793 02/19/2014 TruSeq.v1 EXCLUDE 0.987252 276383 0.946283 0.990877 0.723207 23486 1 76 0.00263112 125 0 6.67684e+07 0.0534245 1.02178e+06 6.73831e+07 9.341e+06 23508 3.31753e+07 0 0.223076 0.990877 0.71661 6.67684e+07 0.00398822 1.44237e+07 1.228e+07 1.44923e+07 149 1.4556e+07 7.39404e+06 0.00330719 1.45822e+07 50.045 0.0151637 0.994503 0 50.1185 GTEX-12WS9-2926-SM-5EGL8 1 C1 4 pieces, no abnormalities 6.1 Brain Brain - Cortex 0001870 574 1136 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 EXCLUDE 0.989824 362386 0.96535 0.992872 0.820076 23591 1 76 0.00215811 269 0 8.25068e+07 0.0342898 3.72281e+06 8.30991e+07 7.43997e+06 23610 4.10322e+07 0 0.145275 0.992872 0.81423 8.25068e+07 0.00320765 1.80427e+07 1.92355e+07 1.81487e+07 267 1.80964e+07 1.01445e+07 0.00268127 1.83146e+07 50.2995 0.0447997 0.995919 0 50.1463 GTEX-12WS9-3026-SM-5EGIE 1 C1 1 piece, all adenohypophysis; no abnormalities 7.1 Pituitary Pituitary 0000007 575 1135 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4764 02/09/2014 TruSeq.v1 EXCLUDE 0.986663 236475 0.965126 0.990534 0.760948 24037 1 76 0.00244997 130 0 6.79013e+07 0.0345813 313445 6.85502e+07 8.87177e+06 24069 3.37321e+07 0 0.204178 0.990534 0.753745 6.79013e+07 0.00546779 1.49447e+07 9.02102e+06 1.50671e+07 144 1.51435e+07 1.08331e+07 0.00395298 1.51196e+07 49.9605 0.00457249 0.994405 0 50.204 GTEX-12WSA-0001-SM-5ANGH C1 Blood Whole Blood 0013756 858 BP-41501 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/30/2013 LCSET-4718 02/04/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-12WSA-0001-SM-5DWRG C1 Blood Whole Blood 0013756 858 BP-41501 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/30/2013 GTEx_OM25_Dec_01 01/29/2014 Illumina OMNI SNP Array OMNI GTEX-12WSA-0001-SM-7DRQ8 C1 Blood Whole Blood 0013756 858 BP-41501 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/30/2013 LCSET-6341 01/12/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-12WSA-0005-SM-5O9BM C1 7 Blood Whole Blood 0013756 858 BP-41459 RNA isolation_PAXgene Blood RNA (Manual) 07/29/2013 LCSET-4910 04/01/2014 TruSeq.v1 EXCLUDE 0.97463 598554 0.971447 0.977426 0.813279 16894 1 76 0.00406872 149 0 8.93905e+07 0.0276213 718104 9.1455e+07 3.7403e+06 16901 4.43978e+07 0 0.158168 0.977426 0.79492 8.93905e+07 0.00552523 2.01882e+07 9.584e+07 2.04744e+07 156 2.04764e+07 2.04016e+07 0.00479489 2.04531e+07 49.9716 0.00785199 0.980222 0 50.3519 GTEX-12WSA-0008-SM-5TDC3 C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 936 BP-45552 RNA isolation_Trizol Manual (Cell Pellet) 11/06/2013 LCSET-5048 04/03/2014 TruSeq.v1 RNASEQ 0.990109 511576 0.978361 0.99341 0.874024 21167 1 76 0.00185145 284 0 9.77919e+07 0.0213553 334454 9.84407e+07 1.2261e+07 21182 4.86388e+07 0 0.104336 0.99341 0.868265 9.77919e+07 0.00341141 2.19716e+07 1.51071e+07 2.19465e+07 267 2.20163e+07 2.51879e+07 0.00262884 2.22251e+07 50.2361 0.00339752 0.996711 0 49.9714 GTEX-12WSA-0011-R10a-SM-AHZMV C1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 862 ChIP-Seq GTEX-12WSA-0011-R10b-SM-5P9ET C1, A1 7.2 Brain Brain - Frontal Cortex (BA9) 0009834 862 BP-43965 RNA isolation_PAXgene Tissue miRNA 09/25/2013 LCSET-4914 03/27/2014 TruSeq.v1 RNASEQ 0.988272 1.02872e+06 0.959273 0.988639 0.827177 24283 1 76 0.00267646 375 0 1.3588e+08 0.0404811 1.12737e+07 1.37442e+08 4.48004e+06 24301 6.76366e+07 0 0.132096 0.988639 0.817779 1.3588e+08 0.00338984 2.91657e+07 5.52545e+07 2.9777e+07 416 2.93618e+07 1.35632e+07 0.00303302 2.96366e+07 50.2329 0.0820257 0.989006 0 50.5185 GTEX-12WSA-0011-R10b-SM-CYKPQ C1, A1 7.2 Brain Brain - Frontal Cortex (BA9) 0009834 862 BP-43965 RNA isolation_PAXgene Tissue miRNA 09/25/2013 RIP-Seq GTEX-12WSA-0011-R2a-SM-57WDK C1, A1 5.8 Brain Brain - Substantia nigra 0002038 862 BP-43579 RNA isolation_PAXgene Tissue miRNA 09/16/2013 LCSET-4415 12/21/2013 TruSeq.v1 RNASEQ 0.990142 496840 0.96553 0.992704 0.847708 22508 1 76 0.0017457 271 0 7.44812e+07 0.0342513 7.41066e+06 7.50286e+07 8.46897e+06 22523 3.70477e+07 0 0.117822 0.992704 0.841523 7.44812e+07 0.0035797 1.64957e+07 1.46972e+07 1.65961e+07 275 1.63786e+07 7.69936e+06 0.00266033 1.68862e+07 50.7629 0.0987711 0.995266 0 50.1516 GTEX-12WSA-0011-R4a-SM-57WB7 C1, A1 6.5 Brain Brain - Amygdala 0001876 862 BP-43579 RNA isolation_PAXgene Tissue miRNA 09/16/2013 LCSET-4415 12/21/2013 TruSeq.v1 RNASEQ 0.985562 468361 0.968446 0.988644 0.850195 21285 1 76 0.00174597 368 0 7.38733e+07 0.0313877 9.79333e+06 7.47219e+07 8.86128e+06 21297 3.67211e+07 0 0.118251 0.988644 0.840539 7.38733e+07 0.00363148 1.6265e+07 2.62105e+07 1.63022e+07 345 1.59658e+07 5.30191e+06 0.00268579 1.67919e+07 51.2609 0.131064 0.991725 0 50.0571 GTEX-12WSA-0011-R5b-SM-5GU5I C1, A1 7 Brain Brain - Caudate (basal ganglia) 0001873 862 BP-43747 RNA isolation_PAXgene Tissue miRNA 09/19/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.990989 856477 0.955413 0.993453 0.865525 22003 1 76 0.00161617 275 0 7.40136e+07 0.0442391 3.77896e+06 7.45014e+07 4.5703e+06 22014 3.68016e+07 0 0.0898885 0.993453 0.859858 7.40136e+07 0.00245493 1.61098e+07 2.39185e+07 1.62901e+07 260 1.61009e+07 1.01927e+07 0.00203451 1.64868e+07 50.5921 0.0507234 0.995916 0 50.2784 GTEX-12WSA-0011-R7b-SM-5GU5U C1, A1 6 Brain Brain - Putamen (basal ganglia) 0001874 862 BP-43747 RNA isolation_PAXgene Tissue miRNA 09/19/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.99096 724420 0.953635 0.993549 0.845524 21723 1 76 0.00165424 198 0 6.59752e+07 0.0461643 4.77074e+06 6.64036e+07 4.18343e+06 21733 3.28016e+07 0 0.108111 0.993549 0.840069 6.59752e+07 0.00268731 1.42697e+07 2.37142e+07 1.43772e+07 233 1.41406e+07 6.16735e+06 0.00216943 1.46919e+07 50.956 0.0718446 0.996137 0 50.1876 GTEX-12WSA-0011-R8a-SM-5P9EX C1, A1 6.9 Brain Brain - Hypothalamus 0001898 862 BP-43965 RNA isolation_PAXgene Tissue miRNA 09/25/2013 LCSET-4914 03/27/2014 TruSeq.v1 RNASEQ 0.991787 1.04443e+06 0.954348 0.991985 0.827122 24893 1 76 0.00278767 378 0 1.40993e+08 0.0454108 9.83549e+06 1.42132e+08 4.63576e+06 24921 7.01919e+07 0 0.127226 0.991985 0.820492 1.40993e+08 0.0034802 3.04606e+07 3.76054e+07 3.12781e+07 406 3.07386e+07 1.47564e+07 0.00313387 3.10143e+07 50.2232 0.0691997 0.992184 0 50.662 GTEX-12WSA-0226-SM-5BC5V 0 C1 6 pieces, minimal dermal fat; squamous epithelium is ~40 microns 6.2 Skin Skin - Sun Exposed (Lower leg) 0004264 934 1417 BP-43916 RNA Extraction from Paxgene-derived Lysate Plate Based 09/24/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.98547 303898 0.969148 0.99058 0.799171 23153 1 76 0.00259699 161 0 6.97328e+07 0.030646 439781 7.03959e+07 1.82076e+07 23171 3.45909e+07 0 0.169977 0.99058 0.791643 6.97328e+07 0.00501774 1.52578e+07 8.9762e+06 1.5394e+07 163 1.54514e+07 1.1905e+07 0.00380112 1.55434e+07 50.1484 0.00624726 0.995691 0 50.2223 GTEX-12WSA-0326-SM-5BC6I 0 C1 2 pieces, ~10-15% fibro-fascial elements, rep. delineated 6 Adipose Tissue Adipose - Subcutaneous 0002190 938 1414 BP-43916 RNA Extraction from Paxgene-derived Lysate Plate Based 09/24/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.988121 251996 0.969844 0.991842 0.780029 22690 1 76 0.00257957 137 0 6.19358e+07 0.0298932 295697 6.24452e+07 1.54714e+07 22715 3.07647e+07 0 0.189814 0.991842 0.773666 6.19358e+07 0.00493918 1.34907e+07 7.38319e+06 1.3597e+07 147 1.36159e+07 9.63668e+06 0.00375495 1.36928e+07 50.1409 0.0047353 0.995563 0 50.1962 GTEX-12WSA-0426-SM-5EQ5X 0 C1 6 pieces, minimal dermal fat, focal nubbin delineated; squamous epithelium is ~30-40 microns 6.1 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 940 1412 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.987794 392934 0.96715 0.991143 0.754439 23787 1 76 0.00201197 167 0 7.38065e+07 0.0326639 596457 7.44661e+07 8.93843e+06 23823 3.66584e+07 0 0.212711 0.991143 0.747757 7.38065e+07 0.0033937 1.61874e+07 9.28004e+06 1.63097e+07 178 1.62767e+07 1.05589e+07 0.0027005 1.64568e+07 50.2751 0.00800978 0.994491 0 50.1882 GTEX-12WSA-0726-SM-5FQU2 0 C1 2 pieces, 10-20% interstitial fat/vascular elements, rep delineated 7.4 Muscle Muscle - Skeletal 0011907 955 1399 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.989202 245339 0.976347 0.992724 0.838648 23675 1 76 0.00191069 286 0 8.659e+07 0.0234184 791295 8.72247e+07 1.34818e+07 23694 4.30632e+07 0 0.137699 0.992724 0.832546 8.659e+07 0.00305765 1.88249e+07 1.1961e+07 1.87868e+07 259 1.88401e+07 1.76372e+07 0.00248213 1.90534e+07 50.2815 0.00907192 0.996247 0 49.9494 GTEX-12WSA-1026-SM-5EGHN 1 C1 2 pieces, mild hylaline membrane deposition, mild-moderate emphysematous changes 6.4 Lung Lung 0008952 980 1376 BP-44525 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.981231 163084 0.969602 0.986644 0.791254 23044 1 76 0.00241633 138 0 6.20657e+07 0.0300791 234475 6.29059e+07 1.00291e+07 23073 3.07819e+07 0 0.178349 0.986644 0.780685 6.20657e+07 0.00576483 1.3585e+07 6.41406e+06 1.3692e+07 145 1.37485e+07 9.88273e+06 0.00408139 1.38449e+07 50.1746 0.00372739 0.992056 0 50.196 GTEX-12WSA-1026-SM-CYKQ3 1 C1 2 pieces, mild hylaline membrane deposition, mild-moderate emphysematous changes 6.4 Lung Lung 0008952 980 1376 BP-44525 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 RIP-Seq GTEX-12WSA-1126-SM-5EGKU 1 C1 2 pieces, no abnormalities 6.2 Heart Heart - Atrial Appendage 0006631 987 1369 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.986506 268264 0.974082 0.990935 0.792878 21934 1 76 0.00174427 151 0 6.92259e+07 0.0257399 1.77894e+06 6.98591e+07 6.67604e+06 21952 3.43776e+07 0 0.181204 0.990935 0.785691 6.92259e+07 0.00305259 1.50911e+07 1.44046e+07 1.50255e+07 194 1.51047e+07 8.5985e+06 0.0023955 1.52753e+07 50.2808 0.0254647 0.995364 0 49.891 GTEX-12WSA-1426-SM-5EGJU 1 C1 6 pieces, Squamous mucosa is ~0.2mm, ~10% thickness 6 Esophagus Esophagus - Mucosa 0006920 994 1364 BP-44525 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.988841 255856 0.969826 0.992212 0.793234 23202 1 76 0.00182063 167 0 7.57378e+07 0.0299674 531818 7.63323e+07 6.85824e+06 23226 3.76433e+07 0 0.176592 0.992212 0.787056 7.57378e+07 0.00296484 1.67109e+07 8.20626e+06 1.68398e+07 182 1.68746e+07 1.30937e+07 0.00239079 1.6923e+07 50.0716 0.00696715 0.995583 0 50.1921 GTEX-12WSA-1626-SM-5EGJV 1 C1 2 pieces, ~10% fibrous/mesothelial hyperplastic tissue, rep delineated 5.7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 998 1361 BP-44525 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.988012 280354 0.973975 0.991567 0.804368 22922 1 76 0.00181139 165 0 7.45108e+07 0.0257417 441253 7.51444e+07 6.60522e+06 22944 3.69922e+07 0 0.169608 0.991567 0.797585 7.45108e+07 0.00317935 1.63359e+07 8.96167e+06 1.63963e+07 183 1.64132e+07 1.27048e+07 0.00249292 1.65725e+07 50.2414 0.00587207 0.995123 0 50.0922 GTEX-12WSA-2926-SM-5EQ4D 1 C1 4 pieces, no abnormalities 5.8 Brain Brain - Cortex 0001870 1036 1332 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.991116 265319 0.973127 0.993765 0.830145 22839 1 76 0.00178847 267 0 7.81126e+07 0.0266357 5.13218e+06 7.86026e+07 9.20452e+06 22854 3.88652e+07 0 0.142982 0.993765 0.824969 7.81126e+07 0.00294699 1.72035e+07 2.30321e+07 1.71154e+07 307 1.69842e+07 7.25753e+06 0.00236619 1.75242e+07 50.7824 0.0652927 0.996415 0 49.8716 GTEX-12WSB-0001-SM-5DU3Y C1 Blood Whole Blood 0013756 1007 BP-41501 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/30/2013 LCSET-4834 02/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-12WSB-0001-SM-7DRQC C1 Blood Whole Blood 0013756 1007 BP-41501 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/30/2013 LCSET-6341 01/12/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) EXCLUDE GTEX-12WSB-0006-SM-5O998 C1 7.9 Blood Whole Blood 0013756 1007 BP-41859 RNA isolation_PAXgene Blood RNA (Manual) 08/02/2013 LCSET-4909 03/20/2014 TruSeq.v1 EXCLUDE 0.985665 1.24065e+06 0.942391 0.989155 0.717389 21352 1 76 0.00284882 139 0 8.98792e+07 0.0567676 139814 9.08647e+07 1.22271e+07 21379 4.46276e+07 0 0.225002 0.989155 0.709609 8.98792e+07 0.00478291 1.95008e+07 8.67628e+07 1.97481e+07 159 1.98168e+07 1.60541e+07 0.00381245 1.97768e+07 49.9495 0.00153871 0.992644 0 50.315 GTEX-12WSB-0008-SM-5TDC5 C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 1107 BP-45552 RNA isolation_Trizol Manual (Cell Pellet) 11/06/2013 LCSET-5048 04/03/2014 TruSeq.v1 EXCLUDE 0.991068 442806 0.974453 0.993883 0.853086 22287 1 76 0.00198721 283 0 9.55637e+07 0.0251982 423740 9.61518e+07 1.14853e+07 22308 4.75469e+07 0 0.121367 0.993883 0.847867 9.55637e+07 0.00358141 2.12212e+07 1.38023e+07 2.12665e+07 264 2.13052e+07 2.21398e+07 0.00278205 2.14503e+07 50.1697 0.00440699 0.996699 0 50.0532 GTEX-12WSB-0011-R11b-SM-57WBJ C1, A1 6 Brain Brain - Cerebellar Hemisphere 0002037 1015 BP-43579 RNA isolation_PAXgene Tissue miRNA 09/16/2013 LCSET-4415 12/21/2013 TruSeq.v1 EXCLUDE 0.987452 676642 0.946209 0.99115 0.771568 22874 1 76 0.00242923 265 0 7.98186e+07 0.0536254 4.928e+06 8.05313e+07 9.54547e+06 22898 3.96406e+07 0 0.174641 0.99115 0.76474 7.98186e+07 0.00449868 1.72841e+07 2.35826e+07 1.71953e+07 260 1.71227e+07 5.33883e+06 0.00346009 1.76153e+07 50.709 0.0611935 0.994849 0 49.8711 GTEX-12WSB-0011-R1b-SM-5P9EY C1, A1 6.1 Brain Brain - Hippocampus 0001954 1015 BP-43965 RNA isolation_PAXgene Tissue miRNA 09/25/2013 LCSET-4914 03/27/2014 TruSeq.v1 EXCLUDE 0.990648 630088 0.963602 0.991 0.809002 23646 1 76 0.00326758 379 0 1.27658e+08 0.0362165 1.07687e+07 1.28817e+08 4.08518e+06 23673 6.35685e+07 0 0.1546 0.991 0.801721 1.27658e+08 0.00394176 2.74328e+07 4.94867e+07 2.82625e+07 384 2.76316e+07 1.06402e+07 0.00360455 2.80807e+07 50.4031 0.0835972 0.991352 0 50.7448 GTEX-12WSB-0011-R5b-SM-5GU67 C1, A1 7.9 Brain Brain - Caudate (basal ganglia) 0001873 1015 BP-43747 RNA isolation_PAXgene Tissue miRNA 09/19/2013 LCSET-4803 02/19/2014 TruSeq.v1 EXCLUDE 0.990372 846861 0.95695 0.993193 0.845648 22960 1 76 0.00201196 200 0 7.47254e+07 0.042676 3.79362e+06 7.52375e+07 4.55979e+06 22971 3.71337e+07 0 0.111302 0.993193 0.839892 7.47254e+07 0.00290044 1.6178e+07 2.32076e+07 1.63419e+07 243 1.6171e+07 9.03424e+06 0.00245494 1.65558e+07 50.5879 0.0504219 0.996013 0 50.252 GTEX-12WSB-0011-R6b-SM-5GU6J C1, A1 7.7 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 1015 BP-43747 RNA isolation_PAXgene Tissue miRNA 09/19/2013 LCSET-4803 02/19/2014 TruSeq.v1 EXCLUDE 0.986206 992312 0.95323 0.990052 0.861836 21773 1 76 0.00216299 204 0 7.36015e+07 0.0465302 5.98294e+06 7.4341e+07 5.04525e+06 21781 3.65382e+07 0 0.0913937 0.990052 0.853262 7.36015e+07 0.00315393 1.58263e+07 2.83316e+07 1.61897e+07 249 1.59632e+07 8.11124e+06 0.00265654 1.63328e+07 50.5722 0.0804797 0.993897 0 50.5674 GTEX-12WSB-0011-R7b-SM-5GU6V C1, A1 7.7 Brain Brain - Putamen (basal ganglia) 0001874 1015 BP-43747 RNA isolation_PAXgene Tissue miRNA 09/19/2013 LCSET-4803 02/19/2014 TruSeq.v1 EXCLUDE 0.987557 897548 0.952609 0.99097 0.863272 20995 1 76 0.00200523 163 0 6.19622e+07 0.0471319 3.92746e+06 6.25268e+07 3.98026e+06 21005 3.07802e+07 0 0.089337 0.99097 0.855476 6.19622e+07 0.00302316 1.34748e+07 2.34687e+07 1.34775e+07 193 1.33347e+07 7.37671e+06 0.00251244 1.38354e+07 50.9214 0.0628124 0.994383 0 50.0051 GTEX-12WSB-0126-SM-59HJN 0 C1 6 pieces; well trimmed; <10% intradermal fat 7.8 Skin Skin - Sun Exposed (Lower leg) 0004264 1106 548 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4419 01/14/2014 TruSeq.v1 EXCLUDE 0.98143 249506 0.971049 0.987453 0.781747 25094 1 76 0.00263058 192 0 8.08656e+07 0.0286692 335110 8.18931e+07 1.42987e+07 25126 4.00873e+07 0 0.189301 0.987453 0.771939 8.08656e+07 0.00867867 1.7502e+07 9.10134e+06 1.76116e+07 166 1.77823e+07 1.4455e+07 0.00563618 1.77821e+07 49.9997 0.00409204 0.993476 0 50.156 GTEX-12WSB-0226-SM-5GCOR 0 C1 2 pieces 6.5 Adipose Tissue Adipose - Subcutaneous 0002190 1109 545 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 EXCLUDE 0.984345 209523 0.972952 0.989357 0.763842 22600 1 76 0.00228083 123 0 5.53148e+07 0.0267118 310175 5.59099e+07 4.73269e+06 22624 2.7435e+07 0 0.20911 0.989357 0.755712 5.53148e+07 0.0035682 1.21177e+07 5.26617e+06 1.21561e+07 126 1.22348e+07 9.28281e+06 0.00292125 1.23051e+07 50.1434 0.00554777 0.994368 0 50.0789 GTEX-12WSB-0326-SM-5GCP4 1 C1 2 pieces; 10-20% internal fat 7.6 Muscle Muscle - Skeletal 0011907 1113 542 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 EXCLUDE 0.983183 229187 0.978391 0.988614 0.838161 20780 1 76 0.00199252 140 0 6.4456e+07 0.0213173 777155 6.51984e+07 5.72873e+06 20793 3.19797e+07 0 0.14023 0.988614 0.828617 6.4456e+07 0.00323173 1.38139e+07 6.49589e+06 1.38286e+07 146 1.39164e+07 1.31762e+07 0.00260872 1.40449e+07 50.2299 0.0119199 0.994045 0 50.0266 GTEX-12WSB-0426-SM-5BC6H 0 C1 2 pieces; 0.4 mm fat surrounding each piece 5.9 Nerve Nerve - Tibial 0001323 1115 540 BP-43916 RNA Extraction from Paxgene-derived Lysate Plate Based 09/24/2013 LCSET-4455 01/18/2014 TruSeq.v1 EXCLUDE 0.984625 303195 0.960752 0.98961 0.686557 25260 1 76 0.00292207 155 0 7.77318e+07 0.0390123 345286 7.85479e+07 2.31618e+07 25307 3.85456e+07 0 0.274195 0.98961 0.679423 7.77318e+07 0.00515547 1.68637e+07 9.35348e+06 1.70562e+07 160 1.7142e+07 9.9211e+06 0.00403315 1.71508e+07 50.0129 0.00439587 0.994594 0 50.2838 GTEX-12WSB-0626-SM-59HJO 1 C1 2 pieces; atrophic fatty mammary tissue 6.5 Breast Breast - Mammary Tissue 0008367 1122 534 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4419 01/14/2014 TruSeq.v1 EXCLUDE 0.980689 272388 0.971644 0.986143 0.765757 24390 1 76 0.00270716 168 0 9.0835e+07 0.0280456 751836 9.21114e+07 1.52242e+07 24428 4.50489e+07 0 0.205888 0.986143 0.755146 9.0835e+07 0.00874986 1.9816e+07 1.0038e+07 1.9895e+07 202 2.00318e+07 1.41535e+07 0.0057118 2.01328e+07 50.1257 0.00816225 0.991597 0 50.0995 GTEX-12WSB-0726-SM-5N9GD 2 C1 2 pieces; fibrosis and lymphoid infiltrate consistent with Hashimoto thyroiditis with nodular goiter 5.7 Thyroid Thyroid 0002046 1129 528 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4905 03/23/2014 TruSeq.v1 EXCLUDE 0.986126 304029 0.967165 0.987574 0.74125 25965 1 76 0.00413954 208 0 9.79329e+07 0.032566 421809 9.91651e+07 4.71666e+06 26005 4.86512e+07 0 0.225916 0.987574 0.732039 9.79329e+07 0.00423337 2.14071e+07 9.68533e+06 2.14346e+07 221 2.14179e+07 1.52235e+07 0.00418638 2.15647e+07 50.1707 0.0042536 0.989022 0 50.0321 GTEX-12WSB-2226-SM-5GCOS 1 C1 2 pieces; atrophic with follicles and corpora albicans 5.9 Ovary Ovary 0000992 1158 506 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 EXCLUDE 0.983689 345939 0.954683 0.988799 0.702384 23615 1 76 0.0022168 136 0 6.34038e+07 0.0451161 194808 6.41221e+07 5.48425e+06 23657 3.14453e+07 0 0.252298 0.988799 0.694517 6.34038e+07 0.00356645 1.35566e+07 1.45687e+07 1.37387e+07 128 1.38115e+07 1.10122e+07 0.00288814 1.38025e+07 49.9836 0.00303808 0.99391 0 50.3336 GTEX-12WSB-2426-SM-5EGJC 2 C1 6 pieces; epitheliall desquamation; stroma 6.7 Vagina Vagina 0000996 1163 502 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 EXCLUDE 0.989679 238027 0.969321 0.992424 0.738553 24287 1 76 0.0020204 143 0 7.13095e+07 0.030453 260284 7.18538e+07 5.84386e+06 24319 3.54595e+07 0 0.230769 0.992424 0.732958 7.13095e+07 0.00313913 1.57568e+07 8.34714e+06 1.59447e+07 155 1.597e+07 1.13336e+07 0.00257822 1.59201e+07 49.9216 0.00362241 0.995169 0 50.2962 GTEX-12WSB-2926-SM-59HKL 1 C1 6 pieces; hyperkeratotic 7.3 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1173 495 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4419 01/14/2014 TruSeq.v1 EXCLUDE 0.98187 336242 0.9749 0.987853 0.771705 24377 1 76 0.00267523 173 0 8.96113e+07 0.0248479 529354 9.07132e+07 1.69069e+07 24408 4.44112e+07 0 0.203196 0.987853 0.762331 8.96113e+07 0.0087876 1.961e+07 1.1598e+07 1.97905e+07 180 1.99724e+07 1.5899e+07 0.0057129 1.99337e+07 49.9516 0.00583547 0.993836 0 50.229 GTEX-12WSB-3026-SM-59HKM 1 C1 4 pieces 6.7 Brain Brain - Cerebellum 0002037 1187 481 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4419 01/14/2014 TruSeq.v1 EXCLUDE 0.981787 241999 0.953145 0.987495 0.763182 22842 1 76 0.00284016 105 0 5.81344e+07 0.0465894 1.53213e+06 5.88706e+07 1.04768e+07 22858 2.8827e+07 0 0.189962 0.987495 0.753639 5.81344e+07 0.00893399 1.26794e+07 1.01857e+07 1.26122e+07 135 1.26778e+07 5.99161e+06 0.00586946 1.29077e+07 50.4493 0.0260255 0.993204 0 49.867 GTEX-12WSB-3226-SM-59HJP 1 C1 1 piece; anterior and posterior present 6.8 Pituitary Pituitary 0000007 1190 479 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4419 01/14/2014 TruSeq.v1 EXCLUDE 0.980662 300243 0.957723 0.987253 0.750587 25574 1 76 0.00266893 133 0 7.75558e+07 0.0420509 510390 7.85571e+07 1.50831e+07 25616 3.84158e+07 0 0.207136 0.987253 0.741019 7.75558e+07 0.0087272 1.62862e+07 1.01295e+07 1.64153e+07 161 1.65794e+07 1.10935e+07 0.00567784 1.65865e+07 50.0107 0.00649705 0.993843 0 50.1974 GTEX-12WSC-0001-SM-5ANGC C1 Blood Whole Blood 0013756 664 BP-41801 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/02/2013 LCSET-4718 02/04/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-12WSC-0001-SM-5DWRP C1 Blood Whole Blood 0013756 664 BP-41801 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/02/2013 GTEx_OM25_Dec_01 01/29/2014 Illumina OMNI SNP Array OMNI GTEX-12WSC-0005-SM-5MR3H C1 9.1 Blood Whole Blood 0013756 664 BP-41859 RNA isolation_PAXgene Blood RNA (Manual) 08/02/2013 LCSET-4902 03/22/2014 TruSeq.v1 RNASEQ 0.99234 643368 0.966427 0.992939 0.731525 20358 1 76 0.00325714 146 0 8.41204e+07 0.0329847 262844 8.47186e+07 3.17817e+06 20379 4.18812e+07 0 0.234903 0.992939 0.726359 8.41204e+07 0.00349938 1.86748e+07 3.10543e+07 1.87939e+07 156 1.87894e+07 1.53745e+07 0.00337819 1.875e+07 49.9476 0.00310255 0.993537 0 50.1589 GTEX-12WSC-0008-SM-664MK C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 788 BP-46001 RNA isolation_Trizol Manual (Cell Pellet) 11/20/2013 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.992953 466350 0.973004 0.993625 0.841721 21397 1 76 0.00203156 228 0 9.50144e+07 0.0266665 356782 9.56239e+07 5.81001e+06 21418 4.73319e+07 0 0.131282 0.993625 0.836356 9.50144e+07 0.00283756 2.12251e+07 1.6372e+07 2.13257e+07 229 2.12854e+07 2.30058e+07 0.00243429 2.13403e+07 50.0644 0.00373109 0.994298 0 50.1182 GTEX-12WSC-0011-R10a-SM-5GU57 C1, A1 6.5 Brain Brain - Frontal Cortex (BA9) 0009834 680 BP-43747 RNA isolation_PAXgene Tissue miRNA 09/19/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.989523 683746 0.956993 0.992411 0.866518 22174 1 76 0.0020472 190 0 6.6399e+07 0.0426637 2.56915e+06 6.69067e+07 4.46706e+06 22186 3.30089e+07 0 0.0904748 0.992411 0.859942 6.6399e+07 0.00302558 1.4441e+07 1.58799e+07 1.45294e+07 208 1.44342e+07 7.8237e+06 0.00253497 1.4729e+07 50.5053 0.038399 0.995299 0 50.1526 GTEX-12WSC-0011-R11a-SM-5GU5J C1, A1 8.2 Brain Brain - Cerebellar Hemisphere 0002037 680 BP-43747 RNA isolation_PAXgene Tissue miRNA 09/19/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.991214 935893 0.935637 0.993421 0.811341 21740 1 76 0.0019262 134 0 6.53379e+07 0.0636525 1.27794e+06 6.57706e+07 4.2231e+06 21753 3.24943e+07 0 0.124296 0.993421 0.806003 6.53379e+07 0.00273361 1.38812e+07 2.53252e+07 1.39936e+07 162 1.39897e+07 1.01801e+07 0.00232901 1.40484e+07 50.1046 0.0194302 0.995628 0 50.2017 GTEX-12WSC-0011-R3a-SM-5P9F1 C1, A1 6.3 Brain Brain - Anterior cingulate cortex (BA24) 0009835 680 BP-43965 RNA isolation_PAXgene Tissue miRNA 09/25/2013 LCSET-4914 03/27/2014 TruSeq.v1 RNASEQ 0.992426 1.00683e+06 0.956744 0.992737 0.839075 24815 1 76 0.00315212 375 0 1.36881e+08 0.0429276 1.02335e+07 1.37882e+08 4.46376e+06 24835 6.81738e+07 0 0.117669 0.992737 0.832981 1.36881e+08 0.00374591 2.94678e+07 4.51577e+07 3.00492e+07 358 2.97217e+07 1.51275e+07 0.00344892 2.98338e+07 50.0941 0.0742189 0.993048 0 50.4884 GTEX-12WSC-0011-R5b-SM-5CVNS C1, A1 7.4 Brain Brain - Caudate (basal ganglia) 0001873 680 BP-44020 RNA isolation_PAXgene Tissue miRNA 09/27/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.986792 570410 0.956498 0.990862 0.832088 23927 1 76 0.00515551 153 0 7.52483e+07 0.043184 4.61124e+06 7.59423e+07 1.42067e+07 23943 3.73418e+07 0 0.12441 0.990862 0.824484 7.52483e+07 0.0074697 1.63115e+07 2.04483e+07 1.6348e+07 199 1.63605e+07 8.3995e+06 0.00630785 1.65821e+07 50.3365 0.0607204 0.994931 0 50.0559 GTEX-12WSC-0011-R6b-SM-5LU99 C1, A1 6.7 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 680 BP-44020 RNA isolation_PAXgene Tissue miRNA 09/27/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.989974 500266 0.95653 0.992083 0.838905 23229 1 76 0.0047869 147 0 6.50594e+07 0.0431475 4.1352e+06 6.55786e+07 5.78302e+06 23244 3.23434e+07 0 0.117625 0.992083 0.832263 6.50594e+07 0.00415096 1.41101e+07 1.40912e+07 1.42492e+07 172 1.41897e+07 7.50053e+06 0.0044696 1.43115e+07 50.2138 0.0630572 0.994191 0 50.2452 GTEX-12WSC-0011-R7b-SM-5LU9L C1, A1 7.6 Brain Brain - Putamen (basal ganglia) 0001874 680 BP-44020 RNA isolation_PAXgene Tissue miRNA 09/27/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.990083 501476 0.955836 0.992577 0.82977 23043 1 76 0.0047085 127 0 5.98066e+07 0.0438165 2.73231e+06 6.02539e+07 5.41366e+06 23057 2.9727e+07 0 0.126066 0.992577 0.82361 5.98066e+07 0.00411103 1.29167e+07 1.33555e+07 1.31104e+07 151 1.30785e+07 7.2196e+06 0.00441052 1.30993e+07 50.0396 0.0453466 0.99507 0 50.372 GTEX-12WSC-0011-R9a-SM-5GU4U C1, A1 6.9 Brain Brain - Spinal cord (cervical c-1) 0006469 680 BP-43747 RNA isolation_PAXgene Tissue miRNA 09/19/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.989205 665146 0.956921 0.992091 0.832064 24513 1 76 0.00224223 378 0 9.10318e+07 0.0428083 6.13220e+06 9.17575e+07 6.01731e+06 24535 4.52482e+07 0 0.124857 0.992091 0.825483 9.10318e+07 0.00321113 1.98808e+07 2.05482e+07 2.02014e+07 349 1.99576e+07 9.83176e+06 0.00272527 2.0376e+07 50.5186 0.0668305 0.994977 0 50.4 GTEX-12WSC-0126-SM-5EQ4P 1 C1 6 pieces, well trimmed but with ~10% intradermal fat, squamous epithelium measures ~33 microns; specimen sequenced and fingerprint confirmed as match to other donor specimens 8.3 Skin Skin - Sun Exposed (Lower leg) 0004264 787 479 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.989394 301743 0.9713 0.992554 0.786745 23785 1 76 0.00212402 197 0 8.12258e+07 0.0283757 204444 8.18351e+07 1.1002e+07 23817 4.03892e+07 0 0.184555 0.992554 0.780887 8.12258e+07 0.00332279 1.7546e+07 9.67411e+06 1.77118e+07 190 1.7783e+07 1.47779e+07 0.0027215 1.77138e+07 49.9025 0.00249824 0.995714 0 50.2352 GTEX-12WSC-0226-SM-5EQ52 0 C1 2 pieces, one includes several large vessels 6.7 Adipose Tissue Adipose - Subcutaneous 0002190 790 477 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.98778 289947 0.972155 0.991403 0.772581 23481 1 76 0.00224563 168 0 7.41933e+07 0.0275005 395879 7.48367e+07 1.01229e+07 23513 3.68645e+07 0 0.199574 0.991403 0.765939 7.41933e+07 0.00328014 1.62007e+07 8.2957e+06 1.63838e+07 171 1.64528e+07 1.18743e+07 0.00276099 1.63874e+07 49.9003 0.00528991 0.995025 0 50.281 GTEX-12WSC-0326-SM-5EQ5E 0 C1 2 pieces 8.4 Muscle Muscle - Skeletal 0011907 793 474 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.991818 261717 0.98299 0.993873 0.876806 18806 1 76 0.00194164 124 0 6.24529e+07 0.0167588 875947 6.28379e+07 7.02052e+06 18811 3.10978e+07 0 0.106184 0.993873 0.871434 6.24529e+07 0.00292386 1.35335e+07 7.4393e+06 1.35597e+07 141 1.35279e+07 1.33622e+07 0.00243173 1.36806e+07 50.2806 0.0139398 0.995928 0 50.0483 GTEX-12WSC-0526-SM-5BC5X 1 C1 2 pieces, no lesions 6.7 Blood Vessel Artery - Tibial 0007610 816 452 BP-43916 RNA Extraction from Paxgene-derived Lysate Plate Based 09/24/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.988303 242271 0.972955 0.992014 0.811741 20888 1 76 0.00273539 140 0 6.42577e+07 0.0266779 500191 6.4775e+07 1.62225e+07 20903 3.192e+07 0 0.161214 0.992014 0.805259 6.42577e+07 0.00495402 1.37226e+07 6.80164e+06 1.38435e+07 148 1.38647e+07 1.09167e+07 0.00384056 1.39226e+07 50.1041 0.00772198 0.995724 0 50.2192 GTEX-12WSC-0826-SM-5EQ5Q 2 C1 2 pieces 7.4 Thyroid Thyroid 0002046 835 435 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.989613 251819 0.970495 0.991966 0.776686 23460 1 76 0.00210384 129 0 5.9661e+07 0.0291422 109587 6.01442e+07 7.18932e+06 23488 2.96798e+07 0 0.193808 0.991966 0.770447 5.9661e+07 0.00316519 1.30465e+07 7.33352e+06 1.31973e+07 130 1.32244e+07 1.09849e+07 0.00263326 1.3152e+07 49.8628 0.00182207 0.99432 0 50.2874 GTEX-12WSC-0926-SM-5EQ63 2 C1 2 pieces, one includes 50% fat and cardiac muscle 7.2 Blood Vessel Artery - Coronary 0001621 845 426 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4767,LCSET-5038,LCSET-5131 03/08/2014 TruSeq.v1 RNASEQ 0.985315 513660 0.975859 0.989787 0.786562 23390 1 76 0.00258376 279 0 1.15195e+08 0.0237007 576936 1.16384e+08 6.78919e+06 23418 5.71404e+07 0 0.189298 0.989787 0.778529 1.15195e+08 0.00335179 2.48158e+07 1.69782e+07 2.51229e+07 328 2.52109e+07 1.9838e+07 0.00296604 2.52156e+07 50.0047 0.00495718 0.99426 0 50.3075 GTEX-12WSC-1026-SM-5EQ5Y 0 C1 2 pieces, atrial appendage with interstitial fibrosis and hypertrophy of myocytes 7.4 Heart Heart - Atrial Appendage 0006631 840 433 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.990361 253653 0.974547 0.993304 0.798635 22004 1 76 0.0021661 112 0 6.06021e+07 0.0251512 1.17856e+06 6.10106e+07 7.31682e+06 22027 3.01372e+07 0 0.175913 0.993304 0.793287 6.06021e+07 0.00327968 1.31337e+07 6.67022e+06 1.31645e+07 137 1.3208e+07 1.04395e+07 0.00272124 1.32569e+07 50.0924 0.0193173 0.996248 0 50.0587 GTEX-12WSC-1126-SM-5EQ4G 1 C1 2 pieces, interstitial/focal patchy fibrosis 6.4 Heart Heart - Left Ventricle 0006566 842 431 BP-44525 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.991762 419023 0.972916 0.994124 0.84835 20930 1 76 0.00224273 131 0 6.16947e+07 0.026846 3.40823e+06 6.20594e+07 7.05865e+06 20946 3.0687e+07 0 0.124565 0.994124 0.843365 6.16947e+07 0.00344503 1.36309e+07 1.20589e+07 1.3579e+07 153 1.35755e+07 1.02184e+07 0.00284245 1.37787e+07 50.3714 0.0549189 0.996485 0 49.9046 GTEX-12WSC-1726-SM-5GCN3 0 C1 2 pieces 7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 853 424 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.983462 345447 0.970165 0.988696 0.798277 23549 1 76 0.00222319 171 0 7.71829e+07 0.0295369 228511 7.80653e+07 7.13206e+06 23573 3.82896e+07 0 0.171888 0.988696 0.789253 7.71829e+07 0.00343911 1.68267e+07 1.19473e+07 1.69685e+07 185 1.70807e+07 1.32074e+07 0.00282793 1.71046e+07 50.0349 0.00292718 0.99393 0 50.2099 GTEX-12WSC-2826-SM-5BC5Y 1 C1 6 pieces, predominantly well trimmed with minimal internal and attached fat 6.8 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 879 406 BP-43916 RNA Extraction from Paxgene-derived Lysate Plate Based 09/24/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.983805 310109 0.970822 0.987927 0.759014 23959 1 76 0.00286035 136 0 6.3377e+07 0.0289465 308432 6.41515e+07 1.80371e+07 23986 3.14575e+07 0 0.211808 0.987927 0.749851 6.3377e+07 0.00522183 1.38636e+07 8.52838e+06 1.40123e+07 143 1.40587e+07 9.61759e+06 0.00403616 1.40684e+07 50.0171 0.00480787 0.99205 0 50.2666 GTEX-12WSC-2926-SM-5BC5Z 1 C1 4 pieces 7 Brain Brain - Cerebellum 0002037 887 399 BP-43916 RNA Extraction from Paxgene-derived Lysate Plate Based 09/24/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.986337 427497 0.948042 0.990386 0.734059 23635 1 76 0.00312794 157 0 7.83008e+07 0.0515355 1.02398e+06 7.9061e+07 2.23534e+07 23656 3.887e+07 0 0.213984 0.990386 0.727001 7.83008e+07 0.00521924 1.68344e+07 1.53172e+07 1.70158e+07 173 1.70975e+07 9.90111e+06 0.00416931 1.70438e+07 49.9214 0.0129518 0.994434 0 50.268 GTEX-12WSC-3026-SM-5GCNF 1 C1 4 pieces, includes adherent meninges 6.7 Brain Brain - Cortex 0001870 889 397 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.985298 247685 0.969756 0.990205 0.838929 23170 1 76 0.00244174 197 0 7.21822e+07 0.029882 2.79967e+06 7.28962e+07 6.46104e+06 23185 3.58324e+07 0 0.130826 0.990205 0.830712 7.21822e+07 0.00363415 1.58248e+07 1.26216e+07 1.58627e+07 236 1.59493e+07 8.6557e+06 0.00303499 1.60483e+07 50.1546 0.0384063 0.995112 0 50.0597 GTEX-12WSC-3126-SM-5GCNB 2 C1 1 piece, adenohypophysis, neurohypophysis, and small portion of pars intermedia 6.6 Pituitary Pituitary 0000007 890 397 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.984605 231494 0.965923 0.989632 0.770089 25218 1 76 0.00225683 135 0 6.7681e+07 0.0337779 394739 6.83901e+07 6.18197e+06 25249 3.35864e+07 0 0.195834 0.989632 0.762104 6.7681e+07 0.00358296 1.45248e+07 7.61166e+06 1.46244e+07 153 1.47261e+07 1.05722e+07 0.00291653 1.47417e+07 50.0264 0.00577187 0.994659 0 50.1707 GTEX-12WSD-0002-SM-5ANGA C1 Blood Whole Blood 0013756 409 BP-41965 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/06/2013 LCSET-4718 02/04/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-12WSD-0002-SM-5DWRK C1 Blood Whole Blood 0013756 409 BP-41965 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/06/2013 GTEx_OM25_Dec_01 01/29/2014 Illumina OMNI SNP Array OMNI GTEX-12WSD-0002-SM-6WSCG C1 Blood Whole Blood 0013756 409 BP-41965 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/06/2013 LCSET-6066 10/01/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-12WSD-0005-SM-5N9FZ C1 8.9 Blood Whole Blood 0013756 409 BP-41899 RNA isolation_PAXgene Blood RNA (Manual) 08/05/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.981503 566572 0.973065 0.983007 0.774721 21922 1 76 0.00454134 160 0 1.00763e+08 0.0262804 308902 1.02505e+08 4.85523e+06 21949 5.00809e+07 0 0.198344 0.983007 0.761556 1.00763e+08 0.00450573 2.29174e+07 6.6538e+07 2.30268e+07 181 2.30639e+07 2.22345e+07 0.00452356 2.30382e+07 49.9721 0.00301353 0.984511 0 50.1191 GTEX-12WSD-0008-SM-664ME C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 484 BP-45552 RNA isolation_Trizol Manual (Cell Pellet) 11/06/2013 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.993594 463449 0.981109 0.994336 0.863763 21191 1 76 0.00205289 293 0 1.26482e+08 0.0185629 292083 1.27202e+08 7.42084e+06 21218 6.3031e+07 0 0.117347 0.994336 0.85887 1.26482e+08 0.0027604 2.8641e+07 1.4533e+07 2.86918e+07 315 2.86791e+07 3.22941e+07 0.00240638 2.87516e+07 50.0631 0.00229621 0.995079 0 50.0443 GTEX-12WSD-0011-R10b-SM-5GU79 C1, A1 7.5 Brain Brain - Frontal Cortex (BA9) 0009834 423 BP-43747 RNA isolation_PAXgene Tissue miRNA 09/19/2013 LCSET-4803 02/19/2014 TruSeq.v1 EXCLUDE 0.990377 888824 0.947581 0.993121 0.859651 20605 1 76 0.00202209 155 0 5.80824e+07 0.0521412 3.29306e+06 5.84847e+07 3.50628e+06 20611 2.88725e+07 0 0.0879299 0.993121 0.853737 5.80824e+07 0.00301065 1.25589e+07 2.2839e+07 1.26594e+07 181 1.24802e+07 6.43375e+06 0.002515 1.28868e+07 50.8015 0.0563064 0.995864 0 50.1991 GTEX-12WSD-0011-R11a-SM-9OSVC C1, A1 6.1 Brain Brain - Cerebellar Hemisphere 0002037 423 BP-60799 RNA isolation_PAXgene Tissue miRNA 02/23/2015 LCSET-7198 06/02/2015 TruSeq.v1 RNASEQ 0.989857 353109 0.94474 0.992287 0.774271 23141 1 76 0.0030138 270 0 8.93089e+07 0.0550285 2.67572e+06 9.00031e+07 9.20339e+06 23169 4.4424e+07 0 0.170469 0.992287 0.768299 8.93089e+07 0.00403495 1.9031e+07 1.78204e+07 1.94814e+07 287 1.94901e+07 7.73982e+06 0.00352313 1.92073e+07 49.6346 0.0297291 0.994718 0 50.5848 GTEX-12WSD-0011-R1b-SM-5LZVY C1, A1 7.2 Brain Brain - Hippocampus 0001954 423 BP-44020 RNA isolation_PAXgene Tissue miRNA 09/27/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.989468 459585 0.95794 0.990918 0.83932 22816 1 76 0.00274572 199 0 7.23086e+07 0.0418554 5.25507e+06 7.29714e+07 3.60013e+06 22831 3.59888e+07 0 0.11862 0.990918 0.831697 7.23086e+07 0.00346818 1.57297e+07 1.59763e+07 1.61176e+07 254 1.59738e+07 6.12098e+06 0.00310642 1.59713e+07 49.996 0.0720154 0.992367 0 50.6089 GTEX-12WSD-0011-R2a-SM-5LZWB C1, A1 5.8 Brain Brain - Substantia nigra 0002038 423 BP-44020 RNA isolation_PAXgene Tissue miRNA 09/27/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.991611 246431 0.972043 0.992987 0.857734 20163 1 76 0.002857 201 0 6.59439e+07 0.0278638 7.77373e+06 6.64096e+07 3.3173e+06 20172 3.28319e+07 0 0.11431 0.992987 0.851718 6.59439e+07 0.00361998 1.44839e+07 1.87653e+07 1.47787e+07 248 1.44411e+07 3.49199e+06 0.00323796 1.48902e+07 50.7655 0.117057 0.994363 0 50.5036 GTEX-12WSD-0011-R3b-SM-5LZWN C1, A1 6.8 Brain Brain - Anterior cingulate cortex (BA24) 0009835 423 BP-44020 RNA isolation_PAXgene Tissue miRNA 09/27/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.991678 355698 0.965382 0.993216 0.843804 21817 1 76 0.00278249 196 0 6.76614e+07 0.0344483 5.98665e+06 6.81235e+07 3.3829e+06 21827 3.36866e+07 0 0.121578 0.993216 0.83808 6.76614e+07 0.00354367 1.47268e+07 1.78948e+07 1.50785e+07 241 1.48015e+07 4.65458e+06 0.00316249 1.50895e+07 50.4817 0.0878794 0.994754 0 50.59 GTEX-12WSD-0011-R4b-SM-5LZUA C1, A1 7.2 Brain Brain - Amygdala 0001876 423 BP-44020 RNA isolation_PAXgene Tissue miRNA 09/27/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.991862 398446 0.966209 0.993176 0.85082 23021 1 76 0.00270284 268 0 7.61014e+07 0.0335268 6.42659e+06 7.66243e+07 3.80887e+06 23035 3.78924e+07 0 0.115389 0.993176 0.845015 7.61014e+07 0.0034105 1.67016e+07 1.50913e+07 1.69911e+07 280 1.68575e+07 7.46064e+06 0.0030562 1.6926e+07 50.1014 0.0838714 0.994491 0 50.4296 GTEX-12WSD-0011-R5b-SM-5CVNG C1, A1 8.4 Brain Brain - Caudate (basal ganglia) 0001873 423 BP-43982 RNA isolation_PAXgene Tissue miRNA 09/26/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.986176 452566 0.963639 0.990003 0.821691 23802 1 76 0.00520198 196 0 7.56736e+07 0.0361067 4.79489e+06 7.64378e+07 1.39302e+07 23821 3.75688e+07 0 0.141947 0.990003 0.813477 7.56736e+07 0.00733724 1.64878e+07 2.44137e+07 1.63797e+07 222 1.62547e+07 6.67734e+06 0.00626548 1.68515e+07 50.9014 0.0627293 0.993829 0 49.8356 GTEX-12WSD-0011-R6b-SM-5P9JU C1, A1 5.8 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 423 BP-43982 RNA isolation_PAXgene Tissue miRNA 09/26/2013 LCSET-4916 03/27/2014 TruSeq.v1 RNASEQ 0.99165 599280 0.958231 0.992192 0.816612 25449 1 76 0.00349258 273 0 1.12684e+08 0.0414301 4.15868e+06 1.13571e+08 3.74949e+06 25478 5.6143e+07 0 0.141619 0.992192 0.810236 1.12684e+08 0.00367628 2.45764e+07 2.47231e+07 2.47485e+07 310 2.46209e+07 1.28684e+07 0.00358438 2.47675e+07 50.1485 0.0366175 0.992734 0 50.1744 GTEX-12WSD-0011-R7b-SM-5PNWE C1, A1 7.9 Brain Brain - Putamen (basal ganglia) 0001874 423 BP-43982 RNA isolation_PAXgene Tissue miRNA 09/26/2013 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.992625 468996 0.961885 0.99438 0.829264 22493 1 76 0.00226126 198 0 6.92894e+07 0.0378553 4.11436e+06 6.9681e+07 6.45896e+06 22502 3.45128e+07 0 0.132621 0.99438 0.824604 6.92894e+07 0.00325047 1.50834e+07 2.20952e+07 1.5121e+07 236 1.49245e+07 6.81048e+06 0.00275499 1.5397e+07 50.7792 0.0590456 0.996135 0 50.0623 GTEX-12WSD-0011-R8b-SM-9QEGI C1, A1 5.6 Brain Brain - Hypothalamus 0001898 423 BP-60799 RNA isolation_PAXgene Tissue miRNA 02/23/2015 LCSET-7199 06/06/2015 TruSeq.v1 EXCLUDE 0.989428 196839 0.960668 0.992733 0.845158 21051 1 76 0.00236298 375 0 8.49092e+07 0.0391589 1.08213e+07 8.55307e+07 4.22334e+06 21062 4.2241e+07 0 0.115511 0.992733 0.839016 8.49092e+07 0.00454734 1.85031e+07 1.65655e+07 1.91645e+07 337 1.87137e+07 4.48239e+06 0.00345153 1.91596e+07 50.5887 0.12652 0.996039 0 50.8779 GTEX-12WSD-0011-R9a-SM-5GU6W C1, A1 7.5 Brain Brain - Spinal cord (cervical c-1) 0006469 423 BP-43747 RNA isolation_PAXgene Tissue miRNA 09/19/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.98821 578310 0.952271 0.99106 0.814164 22943 1 76 0.00216609 150 0 5.67064e+07 0.0474423 2.48395e+06 5.7218e+07 3.58982e+06 22958 2.81751e+07 0 0.138108 0.99106 0.806885 5.67064e+07 0.00314801 1.23878e+07 1.25504e+07 1.251e+07 158 1.23605e+07 6.78326e+06 0.00265564 1.27041e+07 50.6855 0.0434121 0.99391 0 50.2454 GTEX-12WSD-0126-SM-59HKN 0 C1 6 pieces, minimal dermal fat. Squamous epithelium is ~45-50 microns. 6.2 Skin Skin - Sun Exposed (Lower leg) 0004264 484 801 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4419 01/14/2014 TruSeq.v1 RNASEQ 0.982404 253160 0.969847 0.987979 0.789037 24007 1 76 0.00273467 152 0 7.1863e+07 0.029915 451127 7.27374e+07 1.27636e+07 24027 3.564e+07 0 0.18081 0.987979 0.779552 7.1863e+07 0.00898575 1.56834e+07 9.25223e+06 1.57691e+07 156 1.58792e+07 1.11857e+07 0.00584257 1.59392e+07 50.0942 0.00620214 0.993554 0 50.1362 GTEX-12WSD-0226-SM-59HKO 0 C1 3 pieces; ~1--15% fibrofascial tissue or vascular elements, rep. delineated 7.1 Adipose Tissue Adipose - Subcutaneous 0002190 486 800 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4419 01/14/2014 TruSeq.v1 RNASEQ 0.981025 302057 0.971862 0.987353 0.785402 24482 1 76 0.00270123 174 0 8.30906e+07 0.0277765 321905 8.41549e+07 1.68472e+07 24513 4.1174e+07 0 0.18646 0.987353 0.77547 8.30906e+07 0.00884902 1.81124e+07 8.92035e+06 1.82292e+07 175 1.84146e+07 1.41835e+07 0.00575542 1.84152e+07 50.0009 0.00382515 0.993682 0 50.1608 GTEX-12WSD-0326-SM-59HKP 0 C1 2 pieces, no adherent fat; excellent specimens 6.4 Nerve Nerve - Tibial 0001323 491 795 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4419 01/14/2014 TruSeq.v1 RNASEQ 0.981275 286335 0.965419 0.987751 0.787133 24805 1 76 0.00270897 170 0 8.06703e+07 0.0343286 302263 8.16707e+07 1.63188e+07 24841 3.997e+07 0 0.178286 0.987751 0.777491 8.06703e+07 0.00906826 1.74703e+07 8.68074e+06 1.76711e+07 179 1.78228e+07 1.23426e+07 0.00586777 1.78049e+07 49.9748 0.003701 0.994227 0 50.2856 GTEX-12WSD-0526-SM-5EQ6F 0 C1 2 pieces, ~5-10% interstitial fat; rep foci delineated 8.5 Muscle Muscle - Skeletal 0011907 496 791 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.992265 239161 0.983536 0.994435 0.866887 19417 1 76 0.00192781 128 0 6.45599e+07 0.0162417 903314 6.49212e+07 8.08797e+06 19426 3.21474e+07 0 0.11665 0.994435 0.862063 6.45599e+07 0.00281011 1.40856e+07 8.70229e+06 1.40913e+07 148 1.40616e+07 1.36379e+07 0.002368 1.42445e+07 50.3231 0.013914 0.996606 0 50.0102 GTEX-12WSD-0626-SM-5GCMW 0 C1 6 pieces, no dermalt fat; squamous epithelium is ~30-50 microns 7.7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 501 786 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.985763 183618 0.976313 0.990493 0.816031 23111 1 76 0.00227383 153 0 6.39142e+07 0.023386 279524 6.45277e+07 5.05763e+06 23128 3.17197e+07 0 0.160281 0.990493 0.808273 6.39142e+07 0.00364128 1.40082e+07 6.66342e+06 1.4075e+07 147 1.41507e+07 1.19148e+07 0.00295429 1.42203e+07 50.1226 0.00433185 0.995223 0 50.119 GTEX-12WSD-0826-SM-5GCNE 1 C1 2 pieces, minimal/mild congestion 6.1 Lung Lung 0008952 514 774 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.984794 288886 0.965594 0.989449 0.716579 24759 1 76 0.00263736 120 0 6.39311e+07 0.0340104 124657 6.46129e+07 5.30936e+06 24788 3.17178e+07 0 0.249014 0.989449 0.709019 6.39311e+07 0.00389943 1.39231e+07 9.26533e+06 1.40597e+07 135 1.41334e+07 9.0874e+06 0.00326542 1.41346e+07 50.0023 0.00192929 0.994104 0 50.2441 GTEX-12WSD-0926-SM-5GCNL 1 C1 1 piece, no significant abnormalities 6.7 Thyroid Thyroid 0002046 515 774 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.984984 239650 0.960728 0.989372 0.682042 24768 1 76 0.00240551 132 0 7.23697e+07 0.0389861 203517 7.31471e+07 6.02961e+06 24820 3.59196e+07 0 0.278686 0.989372 0.674793 7.23697e+07 0.0035716 1.56792e+07 8.12968e+06 1.57577e+07 144 1.58419e+07 9.96223e+06 0.00298597 1.58967e+07 50.0863 0.0027823 0.99376 0 50.1249 GTEX-12WSD-1026-SM-5EQ42 1 C1 2 pieces, fragmented, aderhent fat up to ~0.6mm on one. No signifianct atherosis noted 6.7 Blood Vessel Artery - Coronary 0001621 522 774 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.988337 282138 0.967136 0.99083 0.754443 23230 1 76 0.00228727 143 0 7.66785e+07 0.032427 169803 7.73882e+07 9.17533e+06 23271 3.81177e+07 0 0.212693 0.99083 0.747525 7.66785e+07 0.00323193 1.62564e+07 6.84248e+06 1.64602e+07 162 1.64779e+07 1.32622e+07 0.00275841 1.64254e+07 49.9202 0.00219417 0.993323 0 50.3114 GTEX-12WSD-1126-SM-5EGJD 1 C1 2 pieces, minimal-mild interstitital fibrosis; occasional contraction band noted, rep encircled 7.6 Heart Heart - Left Ventricle 0006566 523 773 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.989722 232931 0.980049 0.992786 0.819472 21349 1 76 0.00205069 197 0 7.99515e+07 0.019768 2.16425e+06 8.05325e+07 7.47712e+06 21366 3.97749e+07 0 0.160577 0.992786 0.81356 7.99515e+07 0.00305488 1.7719e+07 1.64625e+07 1.75916e+07 248 1.76296e+07 1.20671e+07 0.00255124 1.78904e+07 50.3671 0.0268743 0.99585 0 49.8197 GTEX-12WSD-1226-SM-5HL9Q 1 C1 2 pieces, no significant abnormalities 6.4 Heart Heart - Atrial Appendage 0006631 524 773 BP-45395 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.991398 196407 0.977846 0.993833 0.806275 21025 1 76 0.00219248 110 0 6.16385e+07 0.0218299 594880 6.20209e+07 5.56059e+06 21040 3.06838e+07 0 0.171572 0.993833 0.801302 6.16385e+07 0.00305681 1.27999e+07 5.95111e+06 1.27971e+07 137 1.28023e+07 1.10792e+07 0.00262358 1.29202e+07 50.2293 0.0095916 0.996268 0 49.9946 GTEX-12WSD-1326-SM-5GCNU 1 C1 6 pieces, mild-moderate atherosis up to ~0.3mm noted 6.4 Blood Vessel Artery - Aorta 0001496 525 772 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.983459 225160 0.973534 0.98841 0.79806 21777 1 76 0.00227013 131 0 5.76812e+07 0.0260658 103059 5.83575e+07 4.98214e+06 21799 2.85839e+07 0 0.175473 0.98841 0.788811 5.76812e+07 0.00379498 1.23346e+07 4.8062e+06 1.24299e+07 136 1.24608e+07 1.04092e+07 0.00302874 1.25776e+07 50.2333 0.00176599 0.993362 0 50.1926 GTEX-12WSD-1426-SM-5GCN9 1 C1 2 pieces, no major abnormalities 6.9 Liver Liver 0001114 527 771 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.984005 295468 0.975464 0.988729 0.805385 21763 1 76 0.00235326 154 0 7.54874e+07 0.0243523 953631 7.6348e+07 6.20515e+06 21779 3.74692e+07 0 0.170079 0.988729 0.796307 7.54874e+07 0.00354044 1.64271e+07 1.34057e+07 1.64562e+07 181 1.65372e+07 1.20577e+07 0.00294401 1.66706e+07 50.2008 0.0124906 0.993453 0 50.0443 GTEX-12WSD-1626-SM-5GCNR 1 C1 2 pieces, minimal fat. Islets stil visible; rep. delineated, but autolysis is approaching score '2' in some foci. 5.8 Pancreas Pancreas 0001150 530 774 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.984955 157681 0.984307 0.989595 0.852581 19715 1 76 0.00244399 86 0 6.26534e+07 0.015337 146417 6.33121e+07 5.82465e+06 19724 3.11023e+07 0 0.131726 0.989595 0.84371 6.26534e+07 0.00366729 1.45338e+07 2.35092e+07 1.468e+07 101 1.4684e+07 2.03941e+07 0.00305277 1.48228e+07 50.2352 0.00231262 0.994235 0 50.2503 GTEX-12WSD-1726-SM-5GCN4 2 C1 2 pieces, moderate congestion 6 Spleen Spleen 0002106 532 772 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.98214 271036 0.951231 0.987297 0.64797 24816 1 76 0.00275573 119 0 6.41434e+07 0.0484099 154452 6.49687e+07 5.08452e+06 24858 3.17872e+07 0 0.303261 0.987297 0.639739 6.41434e+07 0.00406328 1.38185e+07 1.01605e+07 1.38947e+07 125 1.39859e+07 8.35977e+06 0.00340609 1.40432e+07 50.1022 0.00237733 0.992454 0 50.1375 GTEX-12WSD-1826-SM-5GCOA 1 C1 6 pieces, squamous mucosa is ~0.3-0.6 mm, ~30-70% total thickness 7.8 Esophagus Esophagus - Mucosa 0006920 534 771 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.982244 231185 0.975494 0.987281 0.756341 22938 1 76 0.00229342 138 0 7.57384e+07 0.0240558 232681 7.67142e+07 7.11288e+06 22965 3.75695e+07 0 0.219152 0.987281 0.746721 7.57384e+07 0.00349035 1.70636e+07 1.09904e+07 1.70795e+07 160 1.71966e+07 1.30752e+07 0.00288883 1.73201e+07 50.179 0.00303309 0.992317 0 50.0234 GTEX-12WSD-1926-SM-5GCOV 1 C1 6 pieces, all muscularis, good specimens 7.6 Esophagus Esophagus - Muscularis 0004648 535 772 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.983424 322673 0.972942 0.988962 0.781367 22189 1 76 0.00231915 121 0 5.59013e+07 0.0267772 300995 5.65253e+07 4.77543e+06 22208 2.76997e+07 0 0.191575 0.988962 0.772743 5.59013e+07 0.0038056 1.19622e+07 4.46521e+06 1.19905e+07 127 1.20527e+07 9.30348e+06 0.00305821 1.21907e+07 50.2845 0.00532497 0.994501 0 50.059 GTEX-12WSD-2026-SM-5HL7D 1 C1 6 pieces, all muscularis, good specimens 7 Esophagus Esophagus - Gastroesophageal Junction 0004550 536 771 BP-45395 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.980932 279417 0.969383 0.983885 0.757625 23479 1 76 0.00236019 160 0 7.60025e+07 0.0303176 401554 7.72473e+07 6.8127e+06 23504 3.77769e+07 0 0.211758 0.983885 0.745416 7.60025e+07 0.00339603 1.63151e+07 6.34196e+06 1.64938e+07 168 1.65085e+07 1.20472e+07 0.00287655 1.65133e+07 50.0072 0.00519829 0.986839 0 50.2723 GTEX-12WSD-2126-SM-5LZWK 1 C1 2 pieces, well preserved; abundant cortex and medulla visible in both sections (delineated)--valuable specimen 7.1 Adrenal Gland Adrenal Gland 0002369 538 769 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.991711 275198 0.975113 0.993203 0.843308 21752 1 76 0.00255748 159 0 6.88372e+07 0.0245316 1.50694e+06 6.93083e+07 3.37083e+06 21769 3.42752e+07 0 0.131805 0.993203 0.837575 6.88372e+07 0.0032249 1.50542e+07 9.66336e+06 1.52662e+07 170 1.52773e+07 1.22111e+07 0.00289069 1.51418e+07 49.7772 0.0217425 0.994695 0 50.3495 GTEX-12WSD-2326-SM-59HKQ 1 C1 6 pieces; mucosa is ~1mm, ~40-60% total thickness and fairly well preserved 6.7 Stomach Stomach 0000945 541 767 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4419 01/14/2014 TruSeq.v1 RNASEQ 0.979032 205488 0.980795 0.98539 0.8205 22973 1 76 0.00283735 224 0 7.29697e+07 0.0188202 886528 7.40516e+07 1.31426e+07 22988 3.61598e+07 0 0.160295 0.98539 0.808512 7.29697e+07 0.00924695 1.64518e+07 3.72404e+07 1.64843e+07 182 1.65637e+07 1.29726e+07 0.00602148 1.67894e+07 50.3383 0.0119718 0.991747 0 50.0493 GTEX-12WSD-2626-SM-5EGJE 1 C1 6 pieces, all muscularis, good specimens 7.2 Colon Colon - Sigmoid 0001159 548 763 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.989696 258726 0.969075 0.992452 0.800921 23035 1 76 0.00202503 153 0 6.97651e+07 0.030682 490779 7.02957e+07 6.01455e+06 23057 3.46922e+07 0 0.168155 0.992452 0.794875 6.97651e+07 0.00315463 1.48527e+07 5.80734e+06 1.50311e+07 166 1.50158e+07 1.10883e+07 0.00258826 1.50473e+07 50.0524 0.00698164 0.995207 0 50.2986 GTEX-12WSD-2726-SM-59HLR 1 C1 2 pieces, typical post menopausal atrophy 7.1 Ovary Ovary 0000992 551 761 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4419 01/14/2014 TruSeq.v1 RNASEQ 0.980573 273035 0.965504 0.985967 0.707881 23824 1 76 0.00273719 142 0 7.94803e+07 0.0342535 193618 8.06116e+07 1.4116e+07 23868 3.94146e+07 0 0.257623 0.985967 0.697947 7.94803e+07 0.00862279 1.72728e+07 9.24853e+06 1.74774e+07 153 1.76042e+07 1.20329e+07 0.00566389 1.75471e+07 49.9188 0.00240186 0.991361 0 50.2943 GTEX-12WSD-2826-SM-59HKT 1 C1 2 pieces, all myometrium, no viable endometrium. Prominent vessels, suspect aliqouts from serosal surface 7 Uterus Uterus 0000995 553 760 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4419 01/14/2014 TruSeq.v1 RNASEQ 0.979554 309665 0.963276 0.986314 0.685777 25054 1 76 0.00290183 169 0 9.39693e+07 0.0364288 188911 9.52733e+07 1.96346e+07 25110 4.65236e+07 0 0.277499 0.986314 0.676391 9.39693e+07 0.00897415 2.02734e+07 1.02073e+07 2.04649e+07 175 2.06862e+07 1.32679e+07 0.00591718 2.06477e+07 49.9535 0.00198283 0.993073 0 50.235 GTEX-12WSD-2926-SM-5LZUH 1 C1 6 pieces, all stroma, squamous mucosa completely sloughed/atrophic 7.1 Vagina Vagina 0000996 555 758 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.991056 130536 0.971935 0.992024 0.755642 23526 1 76 0.00272139 143 0 7.40132e+07 0.0276841 148851 7.46083e+07 3.5757e+06 23557 3.68455e+07 0 0.216294 0.992024 0.749615 7.40132e+07 0.003317 1.61531e+07 6.43726e+06 1.6263e+07 157 1.62618e+07 1.26864e+07 0.0030189 1.62262e+07 49.9451 0.0019951 0.992992 0 50.1695 GTEX-12WSD-3026-SM-5LZU7 1 C1 4 pieces, no significant abnormalities 7 Brain Brain - Cerebellum 0002037 567 747 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.987737 421266 0.950879 0.989156 0.744011 24376 1 76 0.00282525 269 0 9.14744e+07 0.0487542 1.33218e+06 9.24772e+07 4.75202e+06 24410 4.55292e+07 0 0.206868 0.989156 0.735943 9.14744e+07 0.00347516 1.97904e+07 1.47603e+07 2.00382e+07 259 2.00484e+07 1.12038e+07 0.00314974 1.98984e+07 49.8122 0.0144055 0.990576 0 50.3111 GTEX-12WSD-3126-SM-5HL7P 1 C1 4 pieces, no abnormalities; fragment of dura/choroid plexus, delineated 5.8 Brain Brain - Cortex 0001870 570 744 BP-45395 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.99021 355638 0.961211 0.993099 0.82262 23180 1 76 0.00241048 197 0 6.93436e+07 0.0384804 3.30873e+06 6.98255e+07 6.29955e+06 23195 3.4497e+07 0 0.138591 0.993099 0.816943 6.93436e+07 0.00355154 1.50222e+07 1.90647e+07 1.53012e+07 221 1.51769e+07 6.96995e+06 0.00297935 1.53301e+07 50.2511 0.0473857 0.995988 0 50.46 GTEX-12WSD-3226-SM-5HL9G 1 C1 1 piece, mainly adenohypophysis; 5x2mm nubbin of neurohypophysis attached, delineated 6.8 Pituitary Pituitary 0000007 571 744 BP-45395 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.988802 284705 0.953479 0.991914 0.711142 25145 1 76 0.00247603 131 0 6.75732e+07 0.046271 296845 6.8124e+07 6.71447e+06 25181 3.35995e+07 0 0.242337 0.991914 0.705392 6.75732e+07 0.00352 1.43804e+07 1.1753e+07 1.45393e+07 143 1.45858e+07 9.1106e+06 0.00299638 1.45285e+07 49.9015 0.00435742 0.995026 0 50.2747 GTEX-12WSE-0002-SM-5ANG8 C1 Blood Whole Blood 0013756 1348 BP-42167 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/12/2013 LCSET-4718 02/04/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-12WSE-0002-SM-5DWRT C1 Blood Whole Blood 0013756 1348 BP-42167 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/12/2013 GTEx_OM25_Dec_01 01/29/2014 Illumina OMNI SNP Array OMNI GTEX-12WSE-0002-SM-6WSCA C1 Blood Whole Blood 0013756 1348 BP-42167 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/12/2013 LCSET-6235 10/01/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-12WSE-0005-SM-5NQAE C1 8.1 Blood Whole Blood 0013756 1348 BP-42239 RNA isolation_PAXgene Blood RNA (Manual) 08/13/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.969183 300406 0.982006 0.971803 0.79261 19287 1 76 0.00266295 117 0 8.54108e+07 0.0159918 360821 8.7889e+07 1.26206e+07 19294 4.24286e+07 0 0.189397 0.971803 0.770261 8.54108e+07 0.0059568 2.00362e+07 1.29005e+08 2.03062e+07 139 2.02726e+07 2.25164e+07 0.00430544 2.03116e+07 50.0481 0.00410542 0.974423 0 50.3345 GTEX-12WSE-0008-SM-5YY9P C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 1378 BP-46001 RNA isolation_Trizol Manual (Cell Pellet) 11/20/2013 LCSET-5304 05/19/2014 TruSeq.v1 RNASEQ 0.992359 638783 0.973703 0.993676 0.853671 20748 1 76 0.00222813 289 0 1.09529e+08 0.025985 241173 1.10226e+08 4.80419e+06 20770 5.45755e+07 0 0.120031 0.993676 0.848272 1.09529e+08 0.00301841 2.45303e+07 2.06901e+07 2.46387e+07 275 2.46653e+07 2.85588e+07 0.00262275 2.46564e+07 49.9909 0.00218798 0.994993 0 50.1102 GTEX-12WSE-0011-R10a-SM-AHZMZ C1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 1350 ChIP-Seq GTEX-12WSE-0011-R10b-SM-5P9JV C1, A1 7.5 Brain Brain - Frontal Cortex (BA9) 0009834 1350 BP-43982 RNA isolation_PAXgene Tissue miRNA 09/26/2013 LCSET-4916 03/27/2014 TruSeq.v1 RNASEQ 0.993059 795385 0.957776 0.993384 0.84217 24506 1 76 0.00295663 272 0 1.14908e+08 0.0415249 3.07728e+06 1.15674e+08 3.61523e+06 24531 5.72386e+07 0 0.115606 0.993384 0.836598 1.14908e+08 0.00313482 2.51319e+07 2.23668e+07 2.51743e+07 317 2.51033e+07 1.66141e+07 0.0030457 2.52442e+07 50.14 0.0266032 0.993709 0 50.0422 GTEX-12WSE-0011-R10b-SM-CYKPY C1, A1 7.5 Brain Brain - Frontal Cortex (BA9) 0009834 1350 BP-43982 RNA isolation_PAXgene Tissue miRNA 09/26/2013 RIP-Seq GTEX-12WSE-0011-R11b-SM-5P9JW C1, A1 7.7 Brain Brain - Cerebellar Hemisphere 0002037 1350 BP-43982 RNA isolation_PAXgene Tissue miRNA 09/26/2013 LCSET-4916 03/27/2014 TruSeq.v1 RNASEQ 0.991564 717259 0.943567 0.992013 0.727979 24352 1 76 0.00333489 271 0 1.13194e+08 0.0558502 1.19796e+06 1.14106e+08 3.6212e+06 24406 5.63689e+07 0 0.215588 0.992013 0.722165 1.13194e+08 0.00348649 2.44431e+07 2.03204e+07 2.44425e+07 273 2.44323e+07 1.53142e+07 0.00341066 2.45084e+07 50.0778 0.0104987 0.992461 0 49.9994 GTEX-12WSE-0011-R1b-SM-5GU4V C1, A1 7.7 Brain Brain - Hippocampus 0001954 1350 BP-43747 RNA isolation_PAXgene Tissue miRNA 09/19/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.990281 748016 0.9532 0.993148 0.843981 23061 1 76 0.00177513 269 0 7.33548e+07 0.0465229 3.95187e+06 7.38609e+07 4.78871e+06 23077 3.64537e+07 0 0.109219 0.993148 0.838198 7.33548e+07 0.00282795 1.59913e+07 1.74159e+07 1.60866e+07 265 1.59796e+07 7.37134e+06 0.00230002 1.63086e+07 50.5096 0.0535042 0.996016 0 50.1486 GTEX-12WSE-0011-R6b-SM-5LZV5 C1, A1 7.9 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 1350 BP-44020 RNA isolation_PAXgene Tissue miRNA 09/27/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.99004 376815 0.960033 0.991657 0.835794 22827 1 76 0.00229316 266 0 7.26911e+07 0.0397837 6.35066e+06 7.33027e+07 3.57711e+06 22838 3.61919e+07 0 0.124239 0.991657 0.828821 7.26911e+07 0.00301857 1.56544e+07 1.75224e+07 1.62183e+07 286 1.61219e+07 5.58844e+06 0.00265527 1.58522e+07 49.5783 0.0866361 0.993274 0 50.8847 GTEX-12WSE-0011-R7a-SM-5PNWF C1, A1 5.9 Brain Brain - Putamen (basal ganglia) 0001874 1350 BP-43982 RNA isolation_PAXgene Tissue miRNA 09/26/2013 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.971722 507808 0.961178 0.974142 0.82357 18867 1 76 0.00234907 196 0 5.87547e+07 0.0387266 6.32031e+06 6.03143e+07 5.19681e+06 18871 2.91763e+07 0 0.137608 0.974142 0.802275 5.87547e+07 0.00368754 1.25441e+07 3.91853e+07 1.27445e+07 219 1.24724e+07 2.87661e+06 0.00301664 1.29606e+07 50.9597 0.10479 0.976563 0 50.3961 GTEX-12WSE-0526-SM-793B2 1 C1 6 pieces; small amount of subcutaneous fat and 10% intradermal fat 7.9 Skin Skin - Sun Exposed (Lower leg) 0004264 1376 804 BP-48119 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6376,LCSET-6778 02/19/2015 TruSeq.v1 RNASEQ 0.992613 303916 0.977674 0.993609 0.795995 21777 1 76 0.00223724 161 0 6.10331e+07 0.0220392 222829 6.14257e+07 4.66477e+06 21807 3.03627e+07 0 0.181679 0.993609 0.790907 6.10331e+07 0.00286528 1.33561e+07 7.0212e+06 1.33056e+07 145 1.34143e+07 1.10419e+07 0.00255094 1.3309e+07 49.8029 0.00362762 0.994604 0 49.9052 GTEX-12WSE-0826-SM-5S2VL 2 C1 2 pieces; marked vascular congestion and hemorrhage 5.9 Lung Lung 0008952 1385 797 BP-48651 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4996 04/03/2014 TruSeq.v1 RNASEQ 0.986541 319585 0.967173 0.989494 0.742206 24719 1 76 0.00234138 160 0 7.81732e+07 0.0324454 383560 7.90032e+07 7.78411e+06 24756 3.8825e+07 0 0.224967 0.989494 0.734409 7.81732e+07 0.00349314 1.72342e+07 1.74777e+07 1.73566e+07 179 1.73729e+07 1.15627e+07 0.00291554 1.74491e+07 50.1094 0.004855 0.992448 0 50.1769 GTEX-12WSE-0926-SM-5S2VX 0 C1 2 pieces; no fat 6.4 Heart Heart - Atrial Appendage 0006631 1387 796 BP-48651 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4996 04/03/2014 TruSeq.v1 RNASEQ 0.991468 265909 0.976243 0.994011 0.840224 22031 1 76 0.00180091 198 0 7.53131e+07 0.0235258 2.6723e+06 7.57668e+07 7.36212e+06 22054 3.74712e+07 0 0.136018 0.994011 0.835192 7.53131e+07 0.0031121 1.66166e+07 1.13931e+07 1.64727e+07 229 1.6436e+07 1.02043e+07 0.00245483 1.68305e+07 50.593 0.0352701 0.996555 0 49.7824 GTEX-12WSE-1126-SM-7DUEH 0 C1 2 pieces; excessive adherent fat (50% of specimen) 6.8 Blood Vessel Artery - Coronary 0001621 1394 790 BP-48119 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6442 01/24/2015 TruSeq.v1 RNASEQ 0.987225 754786 0.944076 0.987704 0.792798 23492 1 76 0.0028246 169 0 7.84175e+07 0.0556145 516851 7.93936e+07 7.52855e+06 23517 3.90072e+07 0 0.151277 0.987704 0.78305 7.84175e+07 0.00433111 1.66366e+07 3.00329e+07 1.68031e+07 191 1.68358e+07 1.24036e+07 0.00357749 1.66652e+07 49.7454 0.00650998 0.988184 0 50.2489 GTEX-12WSE-1226-SM-73KUF 2 C1 2 pieces 6.4 Thyroid Thyroid 0002046 1400 784 BP-48119 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6197 12/20/2014 TruSeq.v1 RNASEQ 0.992003 253976 0.969578 0.99269 0.811262 25659 1 76 0.00416176 280 0 1.05975e+08 0.0299834 715718 1.06756e+08 4.96803e+06 25697 5.27821e+07 0 0.158316 0.99269 0.805332 1.05975e+08 0.00380605 2.32076e+07 1.36221e+07 2.33328e+07 282 2.33647e+07 1.95419e+07 0.00398403 2.32513e+07 49.8784 0.00670425 0.993377 0 50.1345 GTEX-12WSE-2926-SM-5RQJ9 1 C1 4 pieces; foci of adherent meninges annotated 6.6 Brain Brain - Cerebellum 0002037 1442 758 BP-48576 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.990713 434870 0.944022 0.992228 0.741174 22884 1 76 0.00220357 149 0 7.06501e+07 0.0555821 924149 7.12035e+07 3.48611e+06 22911 3.51316e+07 0 0.202848 0.992228 0.735414 7.06501e+07 0.00309859 1.51617e+07 1.48314e+07 1.53419e+07 170 1.53541e+07 8.71477e+06 0.0026504 1.52573e+07 49.8418 0.012979 0.993744 0 50.2954 GTEX-12WSE-3126-SM-5YY9F 2 C1 1 piece; anterior 6.8 Pituitary Pituitary 0000007 1446 755 BP-49102 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5304 05/19/2014 TruSeq.v1 RNASEQ 0.989115 271834 0.9595 0.990901 0.775624 26023 1 76 0.00263813 273 0 9.4488e+07 0.0402088 1.44071e+06 9.53556e+07 4.52659e+06 26072 4.69944e+07 0 0.183876 0.990901 0.768567 9.4488e+07 0.00361665 2.04657e+07 9.71072e+06 2.06251e+07 274 2.06246e+07 1.32605e+07 0.00312651 2.06317e+07 50.0087 0.0151088 0.992687 0 50.1939 GTEX-12WSF-0002-SM-5DWRS C1 Blood Whole Blood 0013756 706 BP-42167 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/12/2013 GTEx_OM25_Dec_01 01/29/2014 Illumina OMNI SNP Array OMNI GTEX-12WSF-0002-SM-5IX76 C1 Blood Whole Blood 0013756 706 BP-42167 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/12/2013 LCSET-4985 03/16/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-12WSF-0002-SM-6WSCI C1 Blood Whole Blood 0013756 706 BP-42167 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/12/2013 LCSET-6066 09/29/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-12WSF-0005-SM-5NQAQ C1 8.2 Blood Whole Blood 0013756 706 BP-42239 RNA isolation_PAXgene Blood RNA (Manual) 08/13/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.963143 347862 0.980612 0.965936 0.794111 18610 1 76 0.00257746 122 0 9.57563e+07 0.0173209 256640 9.91331e+07 1.40702e+07 18616 4.75596e+07 0 0.186502 0.965936 0.76706 9.57563e+07 0.00568823 2.22649e+07 1.36948e+08 2.25472e+07 161 2.25108e+07 2.43698e+07 0.00412835 2.25896e+07 50.0874 0.00258884 0.968729 0 50.315 GTEX-12WSF-0008-SM-5YY8S C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 825 BP-46001 RNA isolation_Trizol Manual (Cell Pellet) 11/20/2013 LCSET-5304 05/19/2014 TruSeq.v1 RNASEQ 0.992334 483358 0.975366 0.993795 0.842227 22205 1 76 0.0022674 293 0 1.21897e+08 0.0243221 622270 1.22658e+08 5.54981e+06 22236 6.07206e+07 0 0.133139 0.993795 0.837001 1.21897e+08 0.00284586 2.73273e+07 1.77377e+07 2.74422e+07 314 2.74527e+07 3.07634e+07 0.0025562 2.74976e+07 50.0408 0.00507322 0.995257 0 50.1049 GTEX-12WSF-0011-R10a-SM-5LZVH C1, A1 8.1 Brain Brain - Frontal Cortex (BA9) 0009834 766 BP-44020 RNA isolation_PAXgene Tissue miRNA 09/27/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.991633 525167 0.955912 0.993047 0.836288 22891 1 76 0.00238822 156 0 6.36218e+07 0.0436205 2.51585e+06 6.40673e+07 3.15307e+06 22903 3.16663e+07 0 0.119624 0.993047 0.830474 6.36218e+07 0.00311943 1.38634e+07 1.33787e+07 1.39844e+07 179 1.39702e+07 8.39332e+06 0.0027533 1.39688e+07 49.9974 0.0392689 0.994461 0 50.2174 GTEX-12WSF-0011-R10a-SM-AHZNQ C1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 766 ChIP-Seq GTEX-12WSF-0011-R11a-SM-5LZVT C1, A1 6.9 Brain Brain - Cerebellar Hemisphere 0002037 766 BP-44020 RNA isolation_PAXgene Tissue miRNA 09/27/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.99014 498968 0.945147 0.991398 0.753533 22808 1 76 0.00262362 155 0 7.44761e+07 0.0545438 2.08569e+06 7.51223e+07 3.67188e+06 22833 3.70474e+07 0 0.191615 0.991398 0.74705 7.44761e+07 0.00332487 1.60269e+07 1.41011e+07 1.61934e+07 200 1.61773e+07 7.81028e+06 0.0029738 1.61304e+07 49.9275 0.0277639 0.992655 0 50.2585 GTEX-12WSF-0011-R1a-SM-5DUVI C1, A1 8.2 Brain Brain - Hippocampus 0001954 766 BP-44878 RNA isolation_PAXgene Tissue miRNA 10/22/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.989129 506606 0.961354 0.991861 0.846745 22578 1 76 0.00183865 203 0 6.74416e+07 0.0383174 4.72158e+06 6.7995e+07 5.62817e+06 22589 3.35491e+07 0 0.114609 0.991861 0.839854 6.74416e+07 0.00303367 1.49251e+07 1.57134e+07 1.48134e+07 232 1.47859e+07 7.71544e+06 0.00243451 1.51278e+07 50.5715 0.0694401 0.994594 0 49.8121 GTEX-12WSF-0011-R2a-SM-5DUVU C1, A1 5.9 Brain Brain - Substantia nigra 0002038 766 BP-44878 RNA isolation_PAXgene Tissue miRNA 10/22/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.987058 405145 0.970783 0.989933 0.829972 22710 1 76 0.00187276 276 0 8.17245e+07 0.0290268 8.71660e+06 8.25556e+07 7.3837e+06 22723 4.06615e+07 0 0.140812 0.989933 0.821616 8.17245e+07 0.00298959 1.79163e+07 3.41863e+07 1.78398e+07 288 1.76304e+07 7.77112e+06 0.00242955 1.83336e+07 50.9776 0.105585 0.992807 0 49.8931 GTEX-12WSF-0011-R3a-SM-5DUW7 C1, A1 6.9 Brain Brain - Anterior cingulate cortex (BA24) 0009835 766 BP-44878 RNA isolation_PAXgene Tissue miRNA 10/22/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.98825 491268 0.964577 0.990915 0.846014 22690 1 76 0.00184683 198 0 6.92866e+07 0.0350574 5.70122e+06 6.99218e+07 6.18537e+06 22703 3.44691e+07 0 0.118563 0.990915 0.838329 6.92866e+07 0.0031621 1.52525e+07 2.15223e+07 1.522e+07 248 1.51325e+07 7.65592e+06 0.0025027 1.55131e+07 50.6209 0.081537 0.99358 0 49.9466 GTEX-12WSF-0011-R4b-SM-5HL88 C1, A1 7.3 Brain Brain - Amygdala 0001876 766 BP-45053 RNA isolation_PAXgene Tissue miRNA 10/25/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.987893 568565 0.961322 0.991851 0.844265 22556 1 76 0.0020194 199 0 6.72156e+07 0.0384761 5.18811e+06 6.77678e+07 5.52837e+06 22568 3.33916e+07 0 0.117056 0.991851 0.837386 6.72156e+07 0.0033733 1.47496e+07 1.8218e+07 1.47584e+07 234 1.45966e+07 6.06844e+06 0.00269365 1.51611e+07 50.9485 0.0765571 0.99581 0 50.015 GTEX-12WSF-0011-R5a-SM-5HL8K C1, A1 8.3 Brain Brain - Caudate (basal ganglia) 0001873 766 BP-45053 RNA isolation_PAXgene Tissue miRNA 10/25/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.989877 549068 0.957499 0.993111 0.834455 23266 1 76 0.00194602 153 0 6.30047e+07 0.0422517 4.28233e+06 6.34418e+07 5.54759e+06 23282 3.13299e+07 0 0.123044 0.993111 0.828706 6.30047e+07 0.00325561 1.37935e+07 1.45776e+07 1.38446e+07 195 1.37688e+07 6.63577e+06 0.00259868 1.40673e+07 50.5362 0.0675002 0.996345 0 50.0925 GTEX-12WSF-0011-R6b-SM-5HL8W C1, A1 5.9 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 766 BP-45053 RNA isolation_PAXgene Tissue miRNA 10/25/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.989374 552277 0.958996 0.992215 0.843337 22935 1 76 0.00206742 268 0 7.12612e+07 0.0407768 5.96515e+06 7.18203e+07 6.3166e+06 22946 3.54576e+07 0 0.115659 0.992215 0.836772 7.12612e+07 0.00309103 1.54822e+07 2.00145e+07 1.56517e+07 264 1.55628e+07 7.31086e+06 0.00257776 1.57501e+07 50.2991 0.0830566 0.995057 0 50.2723 GTEX-12WSF-0011-R7b-SM-5HL99 C1, A1 7.1 Brain Brain - Putamen (basal ganglia) 0001874 766 BP-45053 RNA isolation_PAXgene Tissue miRNA 10/25/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.988851 638999 0.956968 0.992297 0.834855 22912 1 76 0.00210038 267 0 7.65098e+07 0.0428648 6.94705e+06 7.71038e+07 6.8618e+06 22922 3.80413e+07 0 0.122112 0.992297 0.828424 7.65098e+07 0.00334116 1.65141e+07 2.5559e+07 1.69469e+07 299 1.68066e+07 6.26904e+06 0.00271861 1.68878e+07 50.1205 0.0901 0.995743 0 50.6468 GTEX-12WSF-0426-SM-7KUMT 0 C1 2 pieces, rim of adherent fat up to ~1mm discontinuous around both setions 7.3 Nerve Nerve - Tibial 0001323 845 687 BP-50487 RNA Extraction from Paxgene-derived Lysate Plate Based 03/13/2014 LCSET-6678 03/07/2015 TruSeq.v1 RNASEQ 0.991132 420514 0.969867 0.992964 0.770825 25276 1 76 0.00335817 302 0 1.11006e+08 0.029813 493075 1.11792e+08 7.93805e+06 25322 5.52307e+07 0 0.199042 0.992964 0.765402 1.11006e+08 0.0045388 2.44262e+07 1.07263e+07 2.45263e+07 329 2.45889e+07 1.82498e+07 0.0039474 2.45606e+07 49.9712 0.00441063 0.994797 0 50.1022 GTEX-12WSF-0926-SM-6PALU 1 C1 2 pieces, <5% interstitial fat 7.7 Muscle Muscle - Skeletal 0011907 857 678 BP-50640 RNA Extraction from Paxgene-derived Lysate Plate Based 03/18/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 RNASEQ 0.982736 156220 0.985575 0.989808 0.898935 20135 1 76 0.00297348 201 0 9.40206e+07 0.0140912 2.26005e+06 9.49887e+07 1.08703e+07 20144 4.65912e+07 0 0.0866407 0.989808 0.889773 9.40206e+07 0.00549896 2.05799e+07 9.34621e+06 2.05005e+07 241 2.07687e+07 2.06674e+07 0.0042272 2.09527e+07 50.2204 0.0237929 0.996881 0 49.9033 GTEX-12WSF-1526-SM-6PAN6 1 C1 2 pieces, mld mesothelial hyperplasia/fibrosis, rep focus delineated 5.8 Adipose Tissue Adipose - Visceral (Omentum) 0010414 872 666 BP-54027 RNA Extraction from Paxgene-derived Lysate Plate Based 06/17/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 RNASEQ 0.982434 221149 0.975115 0.988972 0.790497 24572 1 76 0.00322716 277 0 1.1092e+08 0.0245691 677960 1.12157e+08 1.16002e+07 24608 5.49683e+07 0 0.184619 0.988972 0.781779 1.1092e+08 0.00532163 2.43297e+07 1.04558e+07 2.43702e+07 316 2.46454e+07 1.92756e+07 0.00426748 2.47545e+07 50.1104 0.00604473 0.995509 0 50.0416 GTEX-12WSF-1626-SM-7KUG5 0 C1 6 pieces, trace dermal fat; squamous epithelium is ~60microns. One section mis-embedded (squamous epithelium not visible) 6.1 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 874 664 BP-54027 RNA Extraction from Paxgene-derived Lysate Plate Based 06/17/2014 LCSET-6679 03/07/2015 TruSeq.v1 RNASEQ 0.985804 240940 0.97356 0.990475 0.77663 23761 1 76 0.0032195 145 0 6.85629e+07 0.0262246 614544 6.92223e+07 6.3729e+06 23781 3.40209e+07 0 0.19693 0.990475 0.769232 6.85629e+07 0.00359248 1.51155e+07 8.60359e+06 1.52998e+07 152 1.54211e+07 1.09207e+07 0.00340511 1.52989e+07 49.801 0.00887784 0.995147 0 50.303 GTEX-12WSF-3026-SM-6LPIU 1 C1 1 piece, pituitary, ~50% adenohypophysis, ~50% neurohypophysis (delineated) 7.1 Pituitary Pituitary 0000007 952 594 BP-50640 RNA Extraction from Paxgene-derived Lysate Plate Based 03/18/2014 LCSET-5860 08/09/2014 TruSeq.v1 RNASEQ 0.992245 280265 0.96014 0.994414 0.817043 23089 1 76 0.00253584 125 0 6.12889e+07 0.0395487 496696 6.16333e+07 9.50229e+06 23106 3.05191e+07 0 0.143097 0.994414 0.812478 6.12889e+07 0.00352643 1.29812e+07 1.69826e+07 1.30576e+07 137 1.30618e+07 1.15222e+07 0.00303005 1.31072e+07 50.0867 0.00805889 0.996582 0 50.1466 GTEX-12WSF-3126-SM-6M478 1 C1 4 pieces, cerebral cortex, no abnormalities 7.1 Brain Brain - Cortex 0001870 952 595 BP-50640 RNA Extraction from Paxgene-derived Lysate Plate Based 03/18/2014 LCSET-5861 08/08/2014 TruSeq.v1 RNASEQ 0.994563 320383 0.961325 0.995972 0.83829 22868 1 76 0.00237304 197 0 7.09198e+07 0.0383368 3.07128e+06 7.12066e+07 1.01781e+07 22882 3.53557e+07 0 0.123035 0.995972 0.834913 7.09198e+07 0.00331087 1.5532e+07 1.64544e+07 1.56682e+07 234 1.55942e+07 8.41147e+06 0.00284129 1.5697e+07 50.1643 0.0431319 0.997381 0 50.2182 GTEX-12WSF-3126-SM-CYKSU 1 C1 4 pieces, cerebral cortex, no abnormalities 7.1 Brain Brain - Cortex 0001870 952 595 BP-50640 RNA Extraction from Paxgene-derived Lysate Plate Based 03/18/2014 RIP-Seq GTEX-12WSG-0001-SM-5ANGG B1 Blood Whole Blood 0013756 236 BP-41501 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/30/2013 LCSET-4718 02/04/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-12WSG-0001-SM-5DWRF B1 Blood Whole Blood 0013756 236 BP-41501 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/30/2013 GTEx_OM25_Dec_01 01/28/2014 Illumina OMNI SNP Array OMNI GTEX-12WSG-0001-SM-7DRPL B1 Blood Whole Blood 0013756 236 BP-41501 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/30/2013 LCSET-6341 03/05/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-12WSG-0005-SM-5NQA2 B1 8.1 Blood Whole Blood 0013756 236 BP-41459 RNA isolation_PAXgene Blood RNA (Manual) 07/29/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.964683 1.12803e+06 0.951951 0.967311 0.769371 19457 1 76 0.00244787 146 0 9.90077e+07 0.0466431 246057 1.02354e+08 1.44002e+07 19472 4.92102e+07 0 0.182579 0.967311 0.744222 9.90077e+07 0.00562791 2.21442e+07 1.4774e+08 2.26456e+07 166 2.26343e+07 2.36e+07 0.00403357 2.2434e+07 49.7779 0.00240399 0.969939 0 50.5598 GTEX-12WSG-0008-SM-5TDC4 B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 426 BP-45552 RNA isolation_Trizol Manual (Cell Pellet) 11/06/2013 LCSET-5048 04/03/2014 TruSeq.v1 RNASEQ 0.99064 385025 0.977561 0.993509 0.85149 21925 1 76 0.0019367 225 0 9.6657e+07 0.0220993 443265 9.72885e+07 1.19023e+07 21951 4.80873e+07 0 0.126072 0.993509 0.845963 9.6657e+07 0.00351471 2.15581e+07 1.22188e+07 2.16351e+07 253 2.16673e+07 2.35601e+07 0.00272342 2.18054e+07 50.1589 0.00455619 0.996379 0 50.0891 GTEX-12WSG-0226-SM-5EGIF 2 B1 4 pieces, one is skeletal muscle, one is 30% vessels/fibrofatty tissue, patchy chronic inflammation and fibrosis 6.2 Thyroid Thyroid 0002046 331 1300 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.979009 185200 0.962037 0.984815 0.726342 24445 1 76 0.00321149 103 0 5.84382e+07 0.0357197 130556 5.93392e+07 9.95604e+06 24477 2.89019e+07 0 0.235696 0.984815 0.715313 5.84382e+07 0.00651449 1.27673e+07 9.13317e+06 1.28392e+07 119 1.29717e+07 8.4712e+06 0.00485325 1.2958e+07 49.9735 0.00220016 0.990621 0 50.1402 GTEX-12WSG-0326-SM-5FQU3 1 B1 2 pieces, some congestion and emphysematous change and fibrosis 7.7 Lung Lung 0008952 335 1296 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4793 02/19/2014 TruSeq.v1 EXCLUDE 0.989937 250938 0.973206 0.992589 0.766589 23620 1 76 0.00245969 135 0 6.94764e+07 0.026384 133431 6.99951e+07 9.50159e+06 23654 3.45563e+07 0 0.206617 0.992589 0.760908 6.94764e+07 0.00363561 1.53431e+07 6.61e+06 1.543e+07 148 1.54676e+07 1.19021e+07 0.00304608 1.54799e+07 50.0198 0.00190629 0.995242 0 50.1412 GTEX-12WSG-0426-SM-5FQSE 0 B1 2 pieces 6.8 Adipose Tissue Adipose - Visceral (Omentum) 0010414 333 1298 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.988984 306801 0.97217 0.992396 0.788288 23716 1 76 0.00228958 152 0 7.30939e+07 0.0275333 253251 7.36539e+07 1.00532e+07 23749 3.63177e+07 0 0.183882 0.992396 0.782294 7.30939e+07 0.00396606 1.59609e+07 7.70863e+06 1.60441e+07 171 1.60551e+07 1.17394e+07 0.00312494 1.61885e+07 50.2068 0.00343839 0.995808 0 50.13 GTEX-12WSG-0526-SM-5FQTH 1 B1 2 pieces 7.2 Heart Heart - Left Ventricle 0006566 337 1294 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.98847 242304 0.981207 0.992324 0.836617 21423 1 76 0.00218389 196 0 7.7964e+07 0.0186176 5.12612e+06 7.85671e+07 1.26024e+07 21439 3.87629e+07 0 0.14459 0.992324 0.830195 7.7964e+07 0.00353731 1.74387e+07 1.36687e+07 1.73122e+07 250 1.73679e+07 1.2137e+07 0.00285797 1.76411e+07 50.3902 0.065245 0.996178 0 49.8181 GTEX-12WSG-0626-SM-5FQTQ 1 B1 2 pieces, mild steatosis and passive congestion 6.6 Liver Liver 0001114 338 1293 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.98895 259314 0.978636 0.991927 0.826828 21818 1 76 0.00245301 157 0 7.83315e+07 0.0210958 518153 7.89689e+07 1.14465e+07 21841 3.89645e+07 0 0.151808 0.991927 0.820153 7.83315e+07 0.00361223 1.71942e+07 1.12812e+07 1.7285e+07 201 1.73159e+07 1.44627e+07 0.00303088 1.73842e+07 50.0984 0.00656148 0.994905 0 50.1318 GTEX-12WSG-0726-SM-5EGIG 2 B1 2 pieces 6.8 Adrenal Gland Adrenal Gland 0002369 339 1292 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4764,LCSET-5055 02/26/2014 TruSeq.v1 RNASEQ 0.987124 283236 0.96317 0.990827 0.76064 24188 1 76 0.00239495 159 0 7.34302e+07 0.0366445 1.92871e+06 7.411e+07 9.48642e+06 24225 3.6485e+07 0 0.20253 0.990827 0.753663 7.34302e+07 0.00453916 1.59028e+07 8.98413e+06 1.6057e+07 180 1.60793e+07 9.33296e+06 0.00346305 1.61372e+07 50.0899 0.026025 0.99453 0 50.2412 GTEX-12WSG-0826-SM-5EQ5A 2 B1 6 pieces, glomeruli in all sections, rare sclerotic glomerulus, focal vascular hyalinization/thickening 7.3 Kidney Kidney - Cortex 0001225 341 1290 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.992179 222298 0.973074 0.994384 0.805953 22474 1 76 0.0020082 123 0 6.06709e+07 0.0267419 1.93834e+06 6.10136e+07 7.83108e+06 22491 3.0205e+07 0 0.167121 0.994384 0.801427 6.06709e+07 0.00291758 1.34818e+07 1.24301e+07 1.33299e+07 162 1.33218e+07 7.66474e+06 0.00246188 1.36125e+07 50.5397 0.031769 0.99659 0 49.7167 GTEX-12WSG-0926-SM-5EGIH 1 B1 2 pieces, congested 6.1 Spleen Spleen 0002106 345 1286 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.982013 248956 0.95706 0.98698 0.725141 24327 1 76 0.00316305 117 0 6.14896e+07 0.0410618 161498 6.23007e+07 9.44708e+06 24356 3.04452e+07 0 0.23192 0.98698 0.715699 6.14896e+07 0.00640412 1.33502e+07 1.1436e+07 1.35008e+07 127 1.36094e+07 8.70283e+06 0.00477543 1.35365e+07 49.8657 0.00259223 0.991947 0 50.2804 GTEX-12WSG-1026-SM-5EGII 2 B1 2 pieces 7.1 Pancreas Pancreas 0001150 346 1285 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.984424 242906 0.980482 0.989446 0.855752 20464 1 76 0.00246622 93 0 7.80353e+07 0.0188122 89016 7.88677e+07 1.30922e+07 20480 3.8719e+07 0 0.124729 0.989446 0.84672 7.80353e+07 0.00569003 1.8049e+07 3.51136e+07 1.82468e+07 111 1.82903e+07 2.54173e+07 0.00406994 1.84038e+07 50.1546 0.00112867 0.994468 0 50.2724 GTEX-12WSG-1226-SM-5EQ4C 0 B1 2 pieces, <10% fat 7.6 Heart Heart - Atrial Appendage 0006631 349 1282 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.991027 229186 0.977905 0.993588 0.823819 21653 1 76 0.00181943 195 0 7.83386e+07 0.0218154 2.46057e+06 7.88442e+07 1.03163e+07 21671 3.89897e+07 0 0.154086 0.993588 0.818537 7.83386e+07 0.00274489 1.69438e+07 1.34879e+07 1.68423e+07 246 1.68485e+07 1.26767e+07 0.00228097 1.71182e+07 50.3971 0.031208 0.996149 0 49.8498 GTEX-12WSG-1426-SM-5FQUK 0 B1 2 pieces, several corpora albicantia 6.6 Ovary Ovary 0000992 355 1276 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.988504 269382 0.971196 0.99183 0.713866 23015 1 76 0.00233573 142 0 8.05422e+07 0.0284878 167841 8.12056e+07 1.12805e+07 23062 4.00334e+07 0 0.25733 0.99183 0.708034 8.05422e+07 0.00363329 1.77956e+07 9.49677e+06 1.79536e+07 163 1.80165e+07 1.32805e+07 0.00298233 1.79897e+07 49.9628 0.00206686 0.995156 0 50.2209 GTEX-12WSG-2026-SM-5FQUU 2 B1 6 pieces, moderately autolyzed mucosa 6.1 Stomach Stomach 0000945 381 1250 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.959237 205585 0.984255 0.962629 0.86967 21137 1 76 0.00225644 371 0 7.48499e+07 0.0149696 407980 7.77557e+07 1.14908e+07 21151 3.71801e+07 0 0.114585 0.962629 0.837169 7.48499e+07 0.00395905 1.75408e+07 1.44986e+08 1.79035e+07 248 1.79553e+07 2.48458e+07 0.00310475 1.77474e+07 49.7088 0.00524694 0.96602 0 50.5117 GTEX-12WSG-2126-SM-5EGJ7 0 B1 2 pieces, predominantly myometrium with strips of endometrial glands, focal adenomyosis, microscopic leiomyoma 7.7 Uterus Uterus 0000995 382 1249 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.989873 328160 0.965686 0.992616 0.739508 24297 1 76 0.00196248 213 0 9.15539e+07 0.0340159 204735 9.2235e+07 7.76164e+06 24344 4.55296e+07 0 0.226178 0.992616 0.734048 9.15539e+07 0.00285566 1.98038e+07 8.41055e+06 2.00181e+07 231 2.00593e+07 1.53663e+07 0.00240784 2.00003e+07 49.9263 0.00221971 0.995358 0 50.2691 GTEX-12WSG-2426-SM-5EQLZ 2 B1 6 pieces, well trimmed, small focus of autolyzed mucosa 6.5 Colon Colon - Sigmoid 0001159 388 1243 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.991044 250690 0.968533 0.993399 0.804386 23572 1 76 0.00204035 278 0 8.9062e+07 0.0311911 347714 8.96538e+07 1.28422e+07 23601 4.43249e+07 0 0.164147 0.993399 0.799076 8.9062e+07 0.00293516 1.90246e+07 8.59522e+06 1.91346e+07 264 1.91286e+07 1.5111e+07 0.00248669 1.92304e+07 50.1326 0.00387841 0.995754 0 50.1442 GTEX-12WSG-2526-SM-5EQ4O 1 B1 2 pieces, 5-10% internal fat 8.4 Muscle Muscle - Skeletal 0011907 419 1212 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4767 02/09/2014 TruSeq.v1 EXCLUDE 0.992325 215807 0.98314 0.994459 0.864442 19459 1 76 0.00168843 200 0 7.39048e+07 0.0165978 848440 7.43165e+07 9.28991e+06 19464 3.68057e+07 0 0.118698 0.994459 0.859653 7.39048e+07 0.00256411 1.59013e+07 1.43272e+07 1.5794e+07 215 1.58199e+07 1.42203e+07 0.00212533 1.60236e+07 50.3198 0.0114166 0.996593 0 49.8308 GTEX-12WSG-2726-SM-5EQ5M 1 B1 4 pieces, each includes ~30% attached and internal fat 7.9 Nerve Nerve - Tibial 0001323 427 1204 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.989287 295597 0.966336 0.992382 0.740623 23352 1 76 0.00208575 142 0 6.32024e+07 0.0333541 172474 6.36875e+07 7.59485e+06 23385 3.1411e+07 0 0.225714 0.992382 0.734981 6.32024e+07 0.003264 1.38485e+07 5.67925e+06 1.39927e+07 142 1.40203e+07 9.75962e+06 0.00267304 1.40076e+07 49.9773 0.00270813 0.995477 0 50.259 GTEX-12WSG-2826-SM-5FQUS 1 B1 6 pieces, well trimmed, but include up to 20% internal fat, squamous epithelium measures ~35 microns 7.7 Skin Skin - Sun Exposed (Lower leg) 0004264 427 1204 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4793 02/19/2014 TruSeq.v1 EXCLUDE 0.990269 196541 0.975991 0.992997 0.804429 22006 1 76 0.00223945 194 0 7.04328e+07 0.0237089 302318 7.09295e+07 9.83096e+06 22028 3.50459e+07 0 0.171561 0.992997 0.798796 7.04328e+07 0.00354108 1.52777e+07 8.22916e+06 1.53158e+07 164 1.53639e+07 1.26696e+07 0.00288848 1.54104e+07 50.0756 0.00426223 0.995725 0 50.0622 GTEX-12WSG-2826-SM-E9J4H 1 B1 6 pieces, well trimmed, but include up to 20% internal fat, squamous epithelium measures ~35 microns 7.2 Skin Skin - Sun Exposed (Lower leg) 0004264 427 1204 BP-80997 RNA Extraction from Paxgene-derived Lysate Plate Based 11/29/2016 LCSET-10739 03/30/2017 TruSeq.v1 RNASEQ 0.985438 468648 0.973873 0.986527 0.7835 23219 1 76 0.00189965 194 0 7.99466e+07 0.0259094 423507 8.10385e+07 4.07673e+06 23243 3.98162e+07 0 0.190373 0.986527 0.772943 7.99466e+07 0.00287009 1.74901e+07 7.35843e+06 1.76211e+07 196 1.75695e+07 1.30295e+07 0.00238433 1.76295e+07 50.0852 0.005226 0.987615 0 50.1864 GTEX-12WSG-5001-SM-AN3X9 B1 Heart Heart - Left Ventricle 0006566 337 ChIP-Seq GTEX-12WSG-5004-SM-7EPG9 B1 6.8 Lung Lung 0008952 334 BP-56897 RNA isolation_PAXgene Tissue miRNA 09/30/2014 LCSET-6443 01/28/2015 TruSeq.v1 RNASEQ 0.991287 323558 0.972014 0.993486 0.819622 24370 1 76 0.00330586 154 0 9.74672e+07 0.0274616 188933 9.81063e+07 1.24347e+07 24400 4.85496e+07 0 0.152392 0.993486 0.814284 9.74672e+07 0.0116686 2.14501e+07 1.35615e+07 2.16614e+07 167 2.17193e+07 1.83208e+07 0.00747799 2.15945e+07 49.856 0.0019258 0.995686 0 50.245 GTEX-12WSG-5005-SM-AN3XB B1 Lung Lung 0008952 334 ChIP-Seq GTEX-12WSG-5007-SM-7DUGZ B1 7.5 Esophagus Esophagus - Mucosa 0006920 359 BP-56897 RNA isolation_PAXgene Tissue miRNA 09/30/2014 LCSET-6442 01/24/2015 TruSeq.v1 RNASEQ 0.993098 544316 0.969749 0.993977 0.833954 24523 1 76 0.00266976 301 0 1.00699e+08 0.0300132 392328 1.0131e+08 8.73342e+06 24546 5.01735e+07 0 0.135795 0.993977 0.828931 1.00699e+08 0.00396939 2.25437e+07 3.79201e+07 2.28125e+07 268 2.28815e+07 2.33967e+07 0.003319 2.25757e+07 49.6636 0.00387257 0.994855 0 50.2963 GTEX-12WSG-5016-SM-7SB84 B1 6.1 Muscle Muscle - Skeletal 0011907 421 BP-57320 RNA isolation_PAXgene Tissue miRNA 10/20/2014 LCSET-6763 04/27/2015 TruSeq.v1 RNASEQ 0.9909 707932 0.9529 0.99344 0.824028 20481 1 76 0.00233582 161 0 7.8409e+07 0.0469049 912057 7.89267e+07 9.11107e+06 20492 3.90242e+07 0 0.128872 0.99344 0.818622 7.8409e+07 0.00369206 1.65792e+07 2.6492e+07 1.69479e+07 186 1.69416e+07 1.44485e+07 0.00301221 1.67708e+07 49.7467 0.0115557 0.995981 0 50.5499 GTEX-12WSG-5016-SM-AN3XC B1 Muscle Muscle - Skeletal 0011907 421 ChIP-Seq GTEX-12WSH-0001-SM-5ANG1 B1 Blood Whole Blood 0013756 740 BP-41965 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/06/2013 LCSET-4718 02/04/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-12WSH-0001-SM-5DWRM B1 Blood Whole Blood 0013756 740 BP-41965 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/06/2013 GTEx_OM25_Dec_01 01/28/2014 Illumina OMNI SNP Array OMNI GTEX-12WSH-0001-SM-6WSBP B1 Blood Whole Blood 0013756 740 BP-41965 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/06/2013 LCSET-6066 10/06/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-12WSH-0005-SM-5NQ9P B1 8.2 Blood Whole Blood 0013756 740 BP-41899 RNA isolation_PAXgene Blood RNA (Manual) 08/05/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.983667 674342 0.961875 0.986674 0.707224 20150 1 76 0.00303562 138 0 8.65352e+07 0.0373762 303222 8.77039e+07 1.1163e+07 20173 4.29908e+07 0 0.254652 0.986674 0.697799 8.65352e+07 0.00598017 1.91803e+07 6.5391e+07 1.93023e+07 156 1.93861e+07 1.45205e+07 0.00450341 1.93612e+07 49.9679 0.00345734 0.989681 0 50.1585 GTEX-12WSH-0008-SM-5S2V1 B1 9.8 Skin Cells - Cultured fibroblasts EFO_0002009 1007 BP-46001 RNA isolation_Trizol Manual (Cell Pellet) 11/20/2013 LCSET-4996 04/03/2014 TruSeq.v1 RNASEQ 0.99343 421994 0.969339 0.994951 0.842049 21579 1 76 0.0016817 280 0 8.86761e+07 0.0303846 343237 8.9126e+07 9.14333e+06 21600 4.41916e+07 0 0.12729 0.994951 0.837798 8.86761e+07 0.00250866 1.94966e+07 1.5529e+07 1.96653e+07 259 1.96258e+07 1.88556e+07 0.00209455 1.96728e+07 50.0598 0.00385114 0.996472 0 50.2154 GTEX-12WSH-0011-R10a-SM-5LZUS B1, A1 6.8 Brain Brain - Frontal Cortex (BA9) 0009834 795 BP-44020 RNA isolation_PAXgene Tissue miRNA 09/27/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.991393 479689 0.957682 0.992423 0.83978 22790 1 76 0.00241464 197 0 6.79583e+07 0.0420389 4.6158e+06 6.84772e+07 3.38629e+06 22804 3.38035e+07 0 0.117902 0.992423 0.833418 6.79583e+07 0.00315199 1.48516e+07 1.18181e+07 1.49601e+07 216 1.48868e+07 6.94938e+06 0.00278293 1.50007e+07 50.1905 0.0674064 0.993454 0 50.1819 GTEX-12WSH-0011-R10a-SM-AHZ6J B1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 795 ChIP-Seq GTEX-12WSH-0011-R10a-SM-CYKRI B1, A1 6.8 Brain Brain - Frontal Cortex (BA9) 0009834 795 BP-44020 RNA isolation_PAXgene Tissue miRNA 09/27/2013 RIP-Seq GTEX-12WSH-0011-R11a-SM-5LZVM B1, A1 8.1 Brain Brain - Cerebellar Hemisphere 0002037 795 BP-44020 RNA isolation_PAXgene Tissue miRNA 09/27/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.990356 349162 0.948308 0.991558 0.773198 21924 1 76 0.00258122 151 0 6.54836e+07 0.0514247 1.79232e+06 6.60411e+07 3.41248e+06 21941 3.25694e+07 0 0.17511 0.991558 0.766671 6.54836e+07 0.00328283 1.41587e+07 9.93763e+06 1.42771e+07 176 1.42625e+07 6.80127e+06 0.0029316 1.42491e+07 49.9764 0.0271395 0.992759 0 50.2083 GTEX-12WSH-0011-R1a-SM-5GU5V B1, A1 6 Brain Brain - Hippocampus 0001954 795 BP-43747 RNA isolation_PAXgene Tissue miRNA 09/19/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.991632 583760 0.956004 0.993855 0.861827 21929 1 76 0.00178652 206 0 6.76999e+07 0.0437564 6.36169e+06 6.81185e+07 4.26464e+06 21937 3.36864e+07 0 0.0941762 0.993855 0.856531 6.76999e+07 0.00260726 1.48782e+07 1.7703e+07 1.50144e+07 244 1.48104e+07 7.11277e+06 0.00219597 1.52304e+07 50.6991 0.0933916 0.996077 0 50.2279 GTEX-12WSH-0011-R2a-SM-5GU68 B1, A1 6 Brain Brain - Substantia nigra 0002038 795 BP-43747 RNA isolation_PAXgene Tissue miRNA 09/19/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.990663 462798 0.963581 0.993581 0.863614 20902 1 76 0.00182503 210 0 6.4464e+07 0.0362073 8.02470e+06 6.48804e+07 4.19625e+06 20908 3.2051e+07 0 0.0999661 0.993581 0.858071 6.4464e+07 0.00276352 1.4261e+07 1.64942e+07 1.44486e+07 219 1.41846e+07 6.57889e+06 0.0022929 1.47072e+07 50.9045 0.123685 0.9965 0 50.3266 GTEX-12WSH-0011-R4a-SM-5GU6K B1, A1 6 Brain Brain - Amygdala 0001876 795 BP-43747 RNA isolation_PAXgene Tissue miRNA 09/19/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.971122 708264 0.948368 0.973236 0.860217 21372 1 76 0.00230975 207 0 6.57519e+07 0.0513301 6.34689e+06 6.75601e+07 4.15664e+06 21387 3.26698e+07 0 0.0881505 0.973236 0.837194 6.57519e+07 0.00307706 1.43387e+07 2.25147e+07 1.44515e+07 215 1.42745e+07 7.58969e+06 0.00269257 1.46647e+07 50.6742 0.0939443 0.97535 0 50.1959 GTEX-12WSH-0011-R5b-SM-5P9F3 B1, A1 6.2 Brain Brain - Caudate (basal ganglia) 0001873 795 BP-43965 RNA isolation_PAXgene Tissue miRNA 09/25/2013 LCSET-4914 03/27/2014 TruSeq.v1 RNASEQ 0.99001 666004 0.96485 0.990305 0.834233 22910 1 76 0.0027937 371 0 1.20314e+08 0.035012 2.09865e+07 1.21492e+08 3.73248e+06 22922 5.99155e+07 0 0.130616 0.990305 0.826146 1.20314e+08 0.00345173 2.57746e+07 5.73081e+07 2.67232e+07 383 2.60058e+07 8.16322e+06 0.00312262 2.65218e+07 50.4911 0.17274 0.990601 0 50.9035 GTEX-12WSH-0011-R6b-SM-5P9F4 B1, A1 8.4 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 795 BP-43965 RNA isolation_PAXgene Tissue miRNA 09/25/2013 LCSET-4914 03/27/2014 TruSeq.v1 RNASEQ 0.991998 914946 0.954008 0.992288 0.821421 24381 1 76 0.00287358 375 0 1.25978e+08 0.0457848 1.39439e+07 1.26957e+08 4.30823e+06 24398 6.2744e+07 0 0.132586 0.992288 0.815086 1.25978e+08 0.00342287 2.6845e+07 4.71648e+07 2.75848e+07 348 2.71746e+07 1.18419e+07 0.00314815 2.73022e+07 50.1171 0.109831 0.992578 0 50.6795 GTEX-12WSH-0011-R9b-SM-5LZUG B1, A1 6.6 Brain Brain - Spinal cord (cervical c-1) 0006469 795 BP-44020 RNA isolation_PAXgene Tissue miRNA 09/27/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.991149 423804 0.955407 0.992311 0.811574 22698 1 76 0.00236027 218 0 7.07438e+07 0.0443159 3.38242e+06 7.1292e+07 3.40126e+06 22717 3.52063e+07 0 0.143833 0.992311 0.805334 7.07438e+07 0.00312048 1.56514e+07 1.22949e+07 1.59125e+07 203 1.57743e+07 9.21422e+06 0.00273993 1.58734e+07 50.1565 0.0474446 0.993472 0 50.4136 GTEX-12WSH-0126-SM-5GCO3 1 B1 2 pieces; patchy edema and hemorrhage 7.2 Lung Lung 0008952 875 1338 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.984265 166763 0.978891 0.989054 0.738482 22112 1 76 0.00252138 110 0 5.60038e+07 0.0206869 382643 5.66236e+07 4.68671e+06 22146 2.77835e+07 0 0.240409 0.989054 0.730399 5.60038e+07 0.00374615 1.23375e+07 5.14538e+06 1.24279e+07 118 1.25032e+07 9.26527e+06 0.0031308 1.25191e+07 50.0318 0.00675766 0.993843 0 50.1826 GTEX-12WSH-0226-SM-5GCOG 2 B1 2 pieces 6 Thyroid Thyroid 0002046 884 1329 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.980585 173440 0.971329 0.986092 0.800721 23880 1 76 0.00219686 149 0 6.96603e+07 0.0284017 496849 7.06428e+07 5.93732e+06 23903 3.45127e+07 0 0.170608 0.986092 0.789584 6.96603e+07 0.003564 1.52078e+07 7.35392e+06 1.5324e+07 162 1.53929e+07 1.22613e+07 0.00287661 1.55133e+07 50.1947 0.00703325 0.991598 0 50.1902 GTEX-12WSH-0326-SM-5GCNH 1 B1 2 pieces; spermatogenesis present 5.8 Testis Testis 0000473 881 1332 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.984567 259343 0.923374 0.988888 0.715441 32128 1 76 0.00220562 142 0 6.81275e+07 0.0762853 790673 6.88931e+07 5.80638e+06 32179 3.38362e+07 0 0.207934 0.988888 0.70749 6.81275e+07 0.00328334 1.39564e+07 1.01577e+07 1.39259e+07 139 1.40314e+07 1.08147e+07 0.00274213 1.41119e+07 50.143 0.0114768 0.993208 0 49.9453 GTEX-12WSH-1526-SM-5BC5W 1 B1 6 pieces; hair-bearing; 10% internal fat 6.4 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 917 1296 BP-43916 RNA Extraction from Paxgene-derived Lysate Plate Based 09/24/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.983365 388691 0.96972 0.989309 0.783342 23776 1 76 0.00276708 176 0 7.64055e+07 0.0300844 739178 7.72311e+07 2.37443e+07 23801 3.78623e+07 0 0.186378 0.989309 0.774968 7.64055e+07 0.00562532 1.6671e+07 1.14096e+07 1.68645e+07 179 1.69469e+07 1.16457e+07 0.00418761 1.70254e+07 50.1156 0.00957098 0.995253 0 50.2885 GTEX-12WSH-2526-SM-5CVNH 0 B1 2 pieces; 20% internal and external fat 7.8 Muscle Muscle - Skeletal 0011907 1009 1204 BP-44437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.987012 191168 0.983668 0.991103 0.862074 20297 1 76 0.00463339 130 0 7.48787e+07 0.0161106 1.63882e+06 7.55509e+07 1.51061e+07 20308 3.71766e+07 0 0.121594 0.991103 0.854403 7.48787e+07 0.00689513 1.64495e+07 9.32015e+06 1.63887e+07 158 1.64705e+07 1.52963e+07 0.00575959 1.66362e+07 50.2502 0.0216916 0.995193 0 49.9074 GTEX-12WSH-2826-SM-5GCP5 1 B1 2 pieces; eccentric fibrofatty plaque 6.3 Blood Vessel Artery - Tibial 0007610 1015 1198 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.983769 194286 0.97473 0.988733 0.811207 21359 1 76 0.00210043 138 0 6.43113e+07 0.0249648 770335 6.50442e+07 5.54198e+06 21384 3.18952e+07 0 0.163523 0.988733 0.802067 6.43113e+07 0.00351703 1.38921e+07 5.64328e+06 1.39527e+07 152 1.39961e+07 1.17157e+07 0.00280517 1.41548e+07 50.282 0.0118433 0.993697 0 50.1087 GTEX-12WSH-2926-SM-5GCMR 2 B1 1 piece; 20% posterior pituitary [annotated] 6.5 Pituitary Pituitary 0000007 1079 1134 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.985758 300156 0.966533 0.990483 0.761552 25629 1 76 0.00220816 206 0 8.27207e+07 0.0331949 1.73666e+06 8.35155e+07 6.79834e+06 25660 4.10537e+07 0 0.204982 0.990483 0.754304 8.27207e+07 0.00342005 1.81784e+07 9.80621e+06 1.8295e+07 209 1.83976e+07 1.22545e+07 0.00281121 1.84483e+07 50.0688 0.0207945 0.995209 0 50.1599 GTEX-12WSH-3026-SM-5CVNI 1 B1 5 pieces 6.4 Brain Brain - Cortex 0001870 1079 1134 BP-44437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.985765 280885 0.96349 0.990182 0.829915 23650 1 76 0.00477793 195 0 7.83281e+07 0.03627 6.04065e+06 7.91047e+07 1.33889e+07 23669 3.88656e+07 0 0.133575 0.990182 0.821767 7.83281e+07 0.00739425 1.71917e+07 1.61231e+07 1.71831e+07 246 1.71702e+07 7.27599e+06 0.00608026 1.75018e+07 50.4782 0.0763627 0.994599 0 49.9876 GTEX-12WSH-3126-SM-5LZW8 1 B1 2 pieces 6.7 Brain Brain - Cerebellum 0002037 1081 1132 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.990968 230130 0.950708 0.992146 0.730773 22408 1 76 0.00269797 124 0 6.21228e+07 0.0489692 1.18678e+06 6.26146e+07 3.16559e+06 22427 3.09162e+07 0 0.219935 0.992146 0.725034 6.21228e+07 0.00331046 1.35081e+07 9.11941e+06 1.35898e+07 143 1.36095e+07 7.20822e+06 0.00300385 1.35558e+07 49.9013 0.0189538 0.993324 0 50.1507 GTEX-12WSI-0004-SM-5ANGP B1 Blood Whole Blood 0013756 590 BP-41801 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/02/2013 LCSET-4718 02/04/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-12WSI-0004-SM-5DWRW B1 Blood Whole Blood 0013756 590 BP-41801 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/02/2013 GTEx_OM25_Dec_01 01/29/2014 Illumina OMNI SNP Array OMNI GTEX-12WSI-0004-SM-6WSCD B1 Blood Whole Blood 0013756 590 BP-41801 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/02/2013 LCSET-6066 11/08/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-12WSI-0005-SM-5O99K B1 8 Blood Whole Blood 0013756 590 BP-41859 RNA isolation_PAXgene Blood RNA (Manual) 08/02/2013 LCSET-4909 03/20/2014 TruSeq.v1 RNASEQ 0.958493 328825 0.980866 0.961476 0.807757 17814 1 76 0.00215898 93 0 7.55887e+07 0.0175363 194378 7.86173e+07 1.08764e+07 17817 3.75478e+07 0 0.17311 0.961476 0.776639 7.55887e+07 0.00434668 1.78656e+07 1.29414e+08 1.79083e+07 120 1.79436e+07 2.05015e+07 0.00324943 1.80799e+07 50.1892 0.00247246 0.964459 0 50.0597 GTEX-12WSI-0008-SM-664MD B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 924 BP-45552 RNA isolation_Trizol Manual (Cell Pellet) 11/06/2013 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.993555 436337 0.980004 0.994183 0.870063 20605 1 76 0.00191046 284 0 1.17894e+08 0.019676 287656 1.18584e+08 6.89549e+06 20619 5.87548e+07 0 0.109941 0.994183 0.865001 1.17894e+08 0.00259741 2.65523e+07 1.5355e+07 2.66559e+07 306 2.6601e+07 3.02445e+07 0.00225372 2.66869e+07 50.0806 0.00242575 0.99481 0 50.0973 GTEX-12WSI-0011-R11b-SM-5P9EZ B1, A1 8.9 Brain Brain - Cerebellar Hemisphere 0002037 574 BP-43965 RNA isolation_PAXgene Tissue miRNA 09/25/2013 LCSET-4914 03/27/2014 TruSeq.v1 RNASEQ 0.990713 906701 0.944523 0.990916 0.758531 24851 1 76 0.00305358 375 0 1.27181e+08 0.0550387 1.39896e+06 1.28347e+08 4.51674e+06 24891 6.32347e+07 0 0.185992 0.990916 0.75164 1.27181e+08 0.00366898 2.73443e+07 2.49974e+07 2.74783e+07 350 2.74264e+07 1.75215e+07 0.00336122 2.74376e+07 50.0102 0.0108998 0.99112 0 50.1223 GTEX-12WSI-0011-R7b-SM-5GU78 B1, A1 7.1 Brain Brain - Putamen (basal ganglia) 0001874 574 BP-43747 RNA isolation_PAXgene Tissue miRNA 09/19/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.990913 909934 0.944421 0.993463 0.836677 22559 1 76 0.00176185 156 0 6.44666e+07 0.0552784 3.06933e+06 6.48908e+07 3.80559e+06 22573 3.20465e+07 0 0.107744 0.993463 0.831208 6.44666e+07 0.00269306 1.38783e+07 2.19795e+07 1.3929e+07 201 1.38574e+07 7.30415e+06 0.00222626 1.41014e+07 50.4364 0.0472999 0.996014 0 50.0911 GTEX-12WSI-0226-SM-5GCNA 1 B1 2 pieces moderate macro and microvesicular steatosis, moderate congestion, early bridging fibrosis 5.8 Liver Liver 0001114 744 990 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.985778 149798 0.974756 0.9905 0.842327 20945 1 76 0.00199974 128 0 5.67595e+07 0.0251271 1.22426e+06 5.73039e+07 4.75448e+06 20958 2.81718e+07 0 0.132429 0.9905 0.834325 5.67595e+07 0.00333986 1.25766e+07 9.29047e+06 1.24613e+07 165 1.24293e+07 6.73956e+06 0.00266661 1.28564e+07 50.8446 0.0213644 0.995222 0 49.7698 GTEX-12WSI-0426-SM-5EQ5J 1 B1 2 pieces, ischemic changes, diffuse 5.8 Heart Heart - Atrial Appendage 0006631 746 988 BP-44901 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.988278 221314 0.98539 0.991875 0.853938 19679 1 76 0.00179145 263 0 7.35515e+07 0.0144928 4.20325e+06 7.4154e+07 9.52786e+06 19686 3.65529e+07 0 0.131452 0.991875 0.847 7.35515e+07 0.00320049 1.60178e+07 2.74568e+07 1.58682e+07 316 1.56372e+07 6.25772e+06 0.00249342 1.64857e+07 51.3208 0.0566827 0.995473 0 49.7654 GTEX-12WSI-0826-SM-5EGKD 2 B1 2 pieces, moderate congestion, marked patchy interstitial fibrosis; emphysematous changes 7.2 Lung Lung 0008952 760 974 BP-44901 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.988855 295057 0.974089 0.991893 0.783773 24171 1 76 0.00219202 163 0 8.14307e+07 0.0253981 282710 8.20962e+07 7.02545e+06 24212 4.04664e+07 0 0.190316 0.991893 0.777418 8.14307e+07 0.00330386 1.79056e+07 8.53829e+06 1.81659e+07 199 1.81606e+07 1.34325e+07 0.00274624 1.81437e+07 49.9766 0.00344364 0.99493 0 50.3608 GTEX-12WSI-1526-SM-5GCNM 1 B1 2 pieces, minimal fibrosis 6.1 Adipose Tissue Adipose - Visceral (Omentum) 0010414 775 959 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.977402 180746 0.978039 0.981986 0.84668 22741 1 76 0.0021932 152 0 6.85058e+07 0.0215638 285908 6.97625e+07 5.8062e+06 22755 3.39825e+07 0 0.131359 0.981986 0.831429 6.85058e+07 0.00350585 1.50264e+07 8.33461e+06 1.50817e+07 168 1.51136e+07 1.30433e+07 0.00284646 1.53004e+07 50.3072 0.0040983 0.986571 0 50.0917 GTEX-12WSI-2126-SM-5GCMV 2 B1 2 pieces, probable spermatogeneis; autolysis precludes assessment 6.2 Testis Testis 0000473 798 936 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.984124 411257 0.924919 0.988908 0.722024 33484 1 76 0.00215014 181 0 8.81146e+07 0.0747495 877132 8.91029e+07 7.56229e+06 33549 4.37352e+07 0 0.202895 0.988908 0.714015 8.81146e+07 0.00339729 1.8141e+07 1.75489e+07 1.81814e+07 199 1.83173e+07 1.39389e+07 0.0027707 1.8377e+07 50.0815 0.00984403 0.993693 0 50.0556 GTEX-12WSJ-0002-SM-5TDBV B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -112 BP-45438 RNA isolation_Trizol Manual (Cell Pellet) 11/04/2013 LCSET-5048 04/03/2014 TruSeq.v1 RNASEQ 0.990398 588762 0.968152 0.993173 0.82595 22109 1 76 0.00221626 169 0 7.69059e+07 0.0313133 612761 7.74346e+07 9.4311e+06 22138 3.82351e+07 0 0.142203 0.993173 0.820311 7.69059e+07 0.00395034 1.69957e+07 1.11371e+07 1.71259e+07 167 1.71433e+07 1.71352e+07 0.00308088 1.71929e+07 50.0723 0.00791328 0.995949 0 50.1908 GTEX-12WSJ-0003-SM-5ANG5 B1 Blood Whole Blood 0013756 -112 BP-41801 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/02/2013 LCSET-4718 02/04/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-12WSJ-0003-SM-5DWRN B1 Blood Whole Blood 0013756 -112 BP-41801 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/02/2013 GTEx_OM25_Dec_01 01/29/2014 Illumina OMNI SNP Array OMNI GTEX-12WSJ-0003-SM-6WSBN B1 Blood Whole Blood 0013756 -112 BP-41801 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/02/2013 LCSET-6066 10/28/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-12WSJ-0005-SM-5LU8S B1 9.6 Blood Whole Blood 0013756 -112 BP-41859 RNA isolation_PAXgene Blood RNA (Manual) 08/02/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.990625 644982 0.959132 0.99254 0.806994 18976 1 76 0.00455053 112 0 6.24059e+07 0.0405925 164794 6.28749e+07 5.06094e+06 18986 3.10323e+07 0 0.152138 0.99254 0.800974 6.24059e+07 0.00390508 1.36199e+07 2.12292e+07 1.36767e+07 124 1.3706e+07 1.25081e+07 0.00422842 1.37187e+07 50.0232 0.00262098 0.994455 0 50.104 GTEX-12WSJ-0008-SM-664ML B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 208 BP-46001 RNA isolation_Trizol Manual (Cell Pellet) 11/20/2013 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.992813 426927 0.972373 0.993839 0.839189 22460 1 76 0.00200139 291 0 1.02256e+08 0.0272846 270945 1.0289e+08 6.13107e+06 22483 5.09381e+07 0 0.133184 0.993839 0.834018 1.02256e+08 0.00294098 2.27274e+07 1.46673e+07 2.28394e+07 275 2.28127e+07 2.29342e+07 0.0024707 2.2862e+07 50.0539 0.00263335 0.994865 0 50.1229 GTEX-12WSJ-0126-SM-5GCOM 0 B1 2 pieces, both with ~30% attached fat, fat necrosis 8.8 Adrenal Gland Adrenal Gland 0002369 106 1120 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.985286 230695 0.978876 0.99013 0.831222 22169 1 76 0.00196217 202 0 7.50137e+07 0.0207452 1.4065e+06 7.57614e+07 6.54032e+06 22189 3.72412e+07 0 0.147655 0.99013 0.823018 7.50137e+07 0.003051 1.6626e+07 1.3873e+07 1.6439e+07 223 1.65836e+07 1.29488e+07 0.00250392 1.68119e+07 50.3418 0.0185649 0.994975 0 49.7173 GTEX-12WSJ-0226-SM-5GCP7 0 B1 2 pieces, hemosiderin-laden macrophages, focal emphysematous change and fibrosis 8.1 Lung Lung 0008952 109 1117 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.985975 180769 0.976262 0.990603 0.821531 22806 1 76 0.00206424 134 0 6.49228e+07 0.0234018 335626 6.55387e+07 5.85853e+06 22827 3.22407e+07 0 0.154731 0.990603 0.813811 6.49228e+07 0.00317395 1.43963e+07 6.05362e+06 1.44776e+07 155 1.45515e+07 1.19244e+07 0.0026165 1.46091e+07 50.0988 0.00512104 0.995231 0 50.1408 GTEX-12WSJ-0326-SM-5GCMT 1 B1 2 pieces 6.4 Thyroid Thyroid 0002046 110 1116 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.985256 222676 0.968651 0.990142 0.747785 23503 1 76 0.00201224 138 0 7.05363e+07 0.0311388 227526 7.12386e+07 6.18493e+06 23534 3.50099e+07 0 0.220866 0.990142 0.740414 7.05363e+07 0.00331205 1.54582e+07 7.24383e+06 1.55116e+07 159 1.55568e+07 1.0411e+07 0.00265894 1.57352e+07 50.285 0.00319386 0.995028 0 50.0862 GTEX-12WSJ-0526-SM-5GCOZ 0 B1 2 pieces 5.8 Spleen Spleen 0002106 118 1108 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.985721 191979 0.963758 0.990171 0.78421 23242 1 76 0.00226515 133 0 6.44177e+07 0.035799 438021 6.50572e+07 5.26905e+06 23263 3.19702e+07 0 0.179548 0.990171 0.776501 6.44177e+07 0.0036182 1.41075e+07 9.33376e+06 1.41572e+07 153 1.41997e+07 9.75442e+06 0.00293863 1.43399e+07 50.2456 0.00673286 0.994621 0 50.0879 GTEX-12WSJ-0726-SM-5GCN6 0 B1 6 pieces, well trimmed 8.4 Esophagus Esophagus - Muscularis 0004648 126 1100 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.985456 206594 0.977873 0.990415 0.855925 21037 1 76 0.00188515 165 0 6.68756e+07 0.0218222 572828 6.75228e+07 5.88732e+06 21051 3.31932e+07 0 0.121947 0.990415 0.847721 6.68756e+07 0.00307954 1.43506e+07 5.86921e+06 1.43353e+07 166 1.43844e+07 1.26482e+07 0.00247935 1.46069e+07 50.3837 0.00848348 0.995373 0 49.9733 GTEX-12WSJ-0826-SM-5PNWV 0 B1 6 pieces, well trimmed, few detached fragments of squamous epithelium 6 Esophagus Esophagus - Gastroesophageal Junction 0004550 132 1094 BP-45374 RNA Extraction from Paxgene-derived Lysate Plate Based 10/31/2013 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.987971 145064 0.972245 0.988819 0.873459 22168 1 76 0.00300948 216 0 9.83431e+07 0.0275355 994075 9.94551e+07 3.4363e+06 22178 4.88952e+07 0 0.0987859 0.988819 0.863692 9.83431e+07 0.00376188 2.1006e+07 8.52679e+06 2.13118e+07 255 2.10446e+07 2.09677e+07 0.00338536 2.13627e+07 50.3751 0.00999522 0.989666 0 50.3613 GTEX-12WSJ-0926-SM-5P9JD 1 B1 8 pieces, mucosa and muscularis, acute gastritis 7.1 Stomach Stomach 0000945 134 1092 BP-45374 RNA Extraction from Paxgene-derived Lysate Plate Based 10/31/2013 LCSET-4916 03/27/2014 TruSeq.v1 RNASEQ 0.992093 221989 0.979741 0.992815 0.853501 22391 1 76 0.00300904 275 0 9.35759e+07 0.0200013 409122 9.42532e+07 3.00588e+06 22410 4.66326e+07 0 0.12624 0.992815 0.847368 9.35759e+07 0.00332825 2.05432e+07 7.91002e+06 2.08683e+07 272 2.07155e+07 1.74493e+07 0.00316853 2.07586e+07 50.052 0.00434067 0.993536 0 50.3925 GTEX-12WSJ-1126-SM-5LZVJ 1 B1 6 pieces, well trimmed 6.7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 142 1084 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.989755 223811 0.970652 0.991199 0.800379 21716 1 76 0.00244083 144 0 5.92161e+07 0.0291837 594850 5.97419e+07 2.91904e+06 21733 2.94701e+07 0 0.170274 0.991199 0.793335 5.92161e+07 0.00336986 1.3039e+07 8.43747e+06 1.31699e+07 150 1.31247e+07 8.93942e+06 0.00290467 1.31709e+07 50.0878 0.009957 0.992643 0 50.2498 GTEX-12WSJ-1226-SM-5LU91 0 B1 2 pieces, corpora albicantia/fibrosa 8.1 Ovary Ovary 0000992 144 1082 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.991036 284059 0.968216 0.992832 0.756432 22617 1 76 0.00433783 139 0 7.0904e+07 0.0315725 88997 7.14159e+07 5.76976e+06 22654 3.52782e+07 0 0.211784 0.992832 0.75101 7.0904e+07 0.00353523 1.55759e+07 8.14953e+06 1.56716e+07 146 1.56734e+07 1.22737e+07 0.00393726 1.57017e+07 50.0451 0.00124618 0.994629 0 50.1532 GTEX-12WSJ-1326-SM-5GCOB 1 B1 6 pieces, two lack epithelium 7.1 Vagina Vagina 0000996 150 1076 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.985776 189787 0.973463 0.990498 0.793751 22057 1 76 0.00204483 122 0 5.40315e+07 0.0262506 208830 5.45499e+07 4.56932e+06 22077 2.68168e+07 0 0.179712 0.990498 0.786209 5.40315e+07 0.00337525 1.17192e+07 4.42044e+06 1.17865e+07 127 1.18331e+07 9.18252e+06 0.00270687 1.19112e+07 50.1646 0.00382824 0.99522 0 50.1432 GTEX-12WSJ-1426-SM-5GCON 0 B1 6 pieces 7.6 Colon Colon - Sigmoid 0001159 165 1061 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.985488 199688 0.976399 0.990293 0.813704 21784 1 76 0.00191967 132 0 6.00662e+07 0.0233536 287257 6.0655e+07 5.14412e+06 21799 2.98174e+07 0 0.162695 0.990293 0.805805 6.00662e+07 0.00321904 1.30569e+07 5.67536e+06 1.30932e+07 142 1.31436e+07 1.05466e+07 0.0025662 1.32748e+07 50.2484 0.00473592 0.995097 0 50.0693 GTEX-12WSJ-1526-SM-5GCNI 1 B1 6 pieces 7.7 Colon Colon - Transverse 0001157 160 1066 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.985322 209869 0.977711 0.990495 0.832765 22411 1 76 0.00189543 161 0 6.79335e+07 0.0220293 453672 6.85855e+07 5.52096e+06 22425 3.37126e+07 0 0.144946 0.990495 0.82485 6.79335e+07 0.00323639 1.48893e+07 6.26760e+06 1.49406e+07 169 1.49989e+07 1.20286e+07 0.00256241 1.5164e+07 50.2737 0.0066147 0.995667 0 50.086 GTEX-12WSJ-1726-SM-5LZVV 1 B1 2 pieces, scattered atrophic fibers 8.7 Muscle Muscle - Skeletal 0011907 202 1024 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.992648 162015 0.981035 0.994103 0.878691 19150 1 76 0.00210411 164 0 7.17373e+07 0.0187289 641374 7.21629e+07 3.71459e+06 19155 3.57468e+07 0 0.102344 0.994103 0.873509 7.17373e+07 0.00277562 1.57335e+07 8.41067e+06 1.59446e+07 192 1.58875e+07 1.44588e+07 0.00243937 1.58804e+07 49.9887 0.00888786 0.995557 0 50.3332 GTEX-12WSJ-1826-SM-5GCNY 1 B1 6 pieces, include up to 10% internal and attached fat, squamous epithelium measures ~31 microns 7.3 Skin Skin - Sun Exposed (Lower leg) 0004264 208 1018 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.984386 253717 0.97215 0.989247 0.793179 23103 1 76 0.00217052 199 0 7.02984e+07 0.0276238 416269 7.10625e+07 6.31905e+06 23122 3.48883e+07 0 0.178971 0.989247 0.78465 7.02984e+07 0.0035492 1.53167e+07 8.00432e+06 1.53576e+07 168 1.54333e+07 1.17308e+07 0.00285647 1.55642e+07 50.2111 0.00585778 0.994108 0 50.0667 GTEX-12WSK-0003-SM-5ANG3 B1 Blood Whole Blood 0013756 -209 BP-41968 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/06/2013 LCSET-4718 02/04/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-12WSK-0003-SM-5DWRQ B1 Blood Whole Blood 0013756 -209 BP-41968 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/06/2013 GTEx_OM25_Dec_01 01/29/2014 Illumina OMNI SNP Array OMNI GTEX-12WSK-0003-SM-6WSBW B1 Blood Whole Blood 0013756 -209 BP-41968 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/06/2013 LCSET-6066 09/28/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-12WSK-0006-SM-5NQA1 B1 8.3 Blood Whole Blood 0013756 -209 BP-42129 RNA isolation_PAXgene Blood RNA (Manual) 08/09/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.966965 662071 0.968083 0.970105 0.806906 18021 1 76 0.00246361 118 0 9.0282e+07 0.0301233 229583 9.30641e+07 1.43334e+07 18027 4.48466e+07 0 0.161176 0.970105 0.782784 9.0282e+07 0.00552489 2.06247e+07 1.19682e+08 2.10274e+07 150 2.10579e+07 2.32576e+07 0.0039893 2.08952e+07 49.8061 0.00246693 0.973245 0 50.4833 GTEX-12WSK-0008-SM-5YY9R B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 208 BP-46001 RNA isolation_Trizol Manual (Cell Pellet) 11/20/2013 LCSET-5304 05/19/2014 TruSeq.v1 RNASEQ 0.992372 415115 0.975622 0.993559 0.846796 21403 1 76 0.00229261 288 0 1.02352e+08 0.0240705 368939 1.03016e+08 4.78577e+06 21428 5.10059e+07 0 0.128826 0.993559 0.841342 1.02352e+08 0.00281504 2.28599e+07 1.51066e+07 2.29211e+07 259 2.29184e+07 2.63807e+07 0.00255351 2.29914e+07 50.0796 0.00358138 0.994747 0 50.0669 GTEX-12WSK-0126-SM-5GCO7 1 B1 2 pieces, fairly well preserved; no significant abnormalities 6.9 Spleen Spleen 0002106 122 464 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.982462 245418 0.964121 0.987225 0.781495 23496 1 76 0.00330097 136 0 7.37551e+07 0.0309912 437142 7.47095e+07 6.24458e+06 23521 3.64248e+07 0 0.182626 0.987225 0.771511 7.37551e+07 0.00458809 1.63095e+07 1.57453e+07 1.63642e+07 164 1.64755e+07 1.08553e+07 0.00394143 1.65345e+07 50.0894 0.00585122 0.991988 0 50.0837 GTEX-12WSK-0226-SM-5BC62 1 B1 2 pieces, generally well preserved; ~30% adherent/interstitial fat, rep.foci delineated; Islets well preserved, rep encircled; focus of early saponification ensquared 7.6 Pancreas Pancreas 0001150 124 462 BP-43916 RNA Extraction from Paxgene-derived Lysate Plate Based 09/24/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.988452 259271 0.978981 0.99216 0.859412 21591 1 76 0.00274976 102 0 6.99361e+07 0.0206297 210193 7.04888e+07 1.93549e+07 21605 3.47541e+07 0 0.119568 0.99216 0.852674 6.99361e+07 0.00508147 1.59772e+07 2.35323e+07 1.61621e+07 108 1.61622e+07 2.10243e+07 0.00391126 1.6236e+07 50.114 0.00298194 0.995868 0 50.2877 GTEX-12WSK-0326-SM-5GCOJ 1 B1 2 pieces, mainly cortex; ~1x0.4mm focus of medualla encircled; nubbin of adherent fat delineated 7.9 Adrenal Gland Adrenal Gland 0002369 133 453 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.985095 236902 0.977992 0.990042 0.81677 21956 1 76 0.00234786 200 0 7.83867e+07 0.0217473 2.29617e+06 7.91751e+07 6.71046e+06 21986 3.89201e+07 0 0.161222 0.990042 0.808637 7.83867e+07 0.00353512 1.72482e+07 1.45293e+07 1.72367e+07 241 1.72798e+07 1.09486e+07 0.00293852 1.75461e+07 50.3824 0.0290012 0.99499 0 49.9833 GTEX-12WSK-0426-SM-5GCNS 1 B1 6 pieces, minimal atherosis 8 Blood Vessel Artery - Aorta 0001496 136 450 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.985416 185734 0.975525 0.98997 0.837053 20787 1 76 0.00201705 135 0 6.21973e+07 0.0240802 144763 6.28274e+07 5.6042e+06 20800 3.08844e+07 0 0.138472 0.98997 0.828658 6.21973e+07 0.00318967 1.32265e+07 5.10494e+06 1.33117e+07 143 1.33704e+07 1.23385e+07 0.00260067 1.34326e+07 50.1161 0.00230414 0.994525 0 50.1604 GTEX-12WSK-0526-SM-5CVNA 1 B1 2 pieces, no abnormalities 8 Heart Heart - Atrial Appendage 0006631 138 448 BP-45390 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.988132 245423 0.981509 0.991099 0.840508 21137 1 76 0.00507616 194 0 8.77628e+07 0.0182555 2.40755e+06 8.85509e+07 1.51094e+07 21152 4.36211e+07 0 0.141001 0.991099 0.833027 8.77628e+07 0.00689028 1.86356e+07 2.40681e+07 1.85607e+07 247 1.83965e+07 1.25556e+07 0.0059805 1.89789e+07 50.7792 0.0271883 0.994067 0 49.8993 GTEX-12WSK-0626-SM-5LZUJ 1 B1 2 pieces, no significant ischemic changes 9 Heart Heart - Left Ventricle 0006566 148 438 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.992815 258883 0.983894 0.994209 0.870643 21108 1 76 0.00242314 269 0 9.32199e+07 0.0157848 1.11962e+06 9.37628e+07 4.82789e+06 21120 4.64486e+07 0 0.113251 0.994209 0.865601 9.32199e+07 0.00301694 2.04261e+07 1.26810e+07 2.06363e+07 263 2.05574e+07 1.83245e+07 0.00271962 2.06222e+07 50.0787 0.011941 0.995604 0 50.2559 GTEX-12WSK-0726-SM-5LZUV 1 B1 2 pieces, minute (~0.5mm nubbin) ahderent fat delineated; no visible atherosis 8.1 Blood Vessel Artery - Coronary 0001621 155 431 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.992011 211133 0.97669 0.99332 0.862892 21371 1 76 0.00233351 170 0 7.70574e+07 0.022893 291913 7.75756e+07 3.85412e+06 21386 3.83726e+07 0 0.113799 0.99332 0.857128 7.70574e+07 0.00301934 1.6505e+07 5.61926e+06 1.66917e+07 185 1.66638e+07 1.62726e+07 0.00267597 1.66284e+07 49.9468 0.00376295 0.994629 0 50.2812 GTEX-12WSK-0826-SM-5CVNP 1 B1 2 pieces, severe chronic fibrosing chronic and focally acute pneumonitis, features of DAD 7 Lung Lung 0008952 157 429 BP-44437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.987662 240461 0.969809 0.990845 0.760793 24762 1 76 0.00495155 133 0 7.48276e+07 0.0298771 294744 7.5519e+07 1.30886e+07 24793 3.71603e+07 0 0.209016 0.990845 0.753828 7.48276e+07 0.00676921 1.6449e+07 7.21083e+06 1.65919e+07 148 1.66391e+07 1.13058e+07 0.00585746 1.66274e+07 49.9823 0.00390291 0.994028 0 50.2163 GTEX-12WSK-0926-SM-5CVNQ 1 B1 2 pieces, no significant abnormalities; few incidental colloid cysts; rep encircled 6.6 Thyroid Thyroid 0002046 160 426 BP-44437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.98366 254145 0.965596 0.98827 0.739168 24067 1 76 0.00489018 139 0 8.17917e+07 0.0341474 343283 8.27624e+07 1.65696e+07 24114 4.05617e+07 0 0.226428 0.98827 0.730498 8.17917e+07 0.00703172 1.78098e+07 9.38374e+06 1.79696e+07 157 1.80532e+07 1.20163e+07 0.00595595 1.80803e+07 50.0375 0.00414781 0.99288 0 50.2233 GTEX-12WSK-1026-SM-5CVNR 1 B1 2 pieces, minimal fibrous/vascular tissue 7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 161 425 BP-44437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.978126 207855 0.977016 0.982356 0.825355 22734 1 76 0.00487813 159 0 7.55351e+07 0.0227342 560914 7.68918e+07 1.38506e+07 22752 3.74787e+07 0 0.151661 0.982356 0.810793 7.55351e+07 0.00711304 1.65887e+07 8.62305e+06 1.67208e+07 169 1.67108e+07 1.19077e+07 0.00599078 1.69005e+07 50.2821 0.00729485 0.986587 0 50.1982 GTEX-12WSK-1126-SM-5LZV8 1 B1 6 pieces, squamous mucosa well preserved; ~0.5mm, ~25% thickness 8.9 Esophagus Esophagus - Mucosa 0006920 168 418 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.991399 244286 0.978653 0.992786 0.829221 21550 1 76 0.0025411 149 0 7.1811e+07 0.0209145 303617 7.23328e+07 3.63719e+06 21568 3.5767e+07 0 0.149431 0.992786 0.823239 7.1811e+07 0.00322952 1.62239e+07 8.92373e+06 1.63053e+07 163 1.63129e+07 1.42071e+07 0.00288483 1.63117e+07 49.9982 0.0041975 0.994174 0 50.1252 GTEX-12WSK-1326-SM-5CVNM 1 B1 6 pieces, all muscularis, good sepcimens 7.4 Esophagus Esophagus - Gastroesophageal Junction 0004550 171 415 BP-44437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.986548 351674 0.976581 0.990702 0.830265 22331 1 76 0.00467496 148 0 7.65392e+07 0.0231097 572532 7.72575e+07 1.28112e+07 22353 3.79694e+07 0 0.146315 0.990702 0.822545 7.65392e+07 0.00693629 1.65329e+07 6.92909e+06 1.6636e+07 163 1.66588e+07 1.32815e+07 0.00580089 1.68076e+07 50.2223 0.00741069 0.994856 0 50.1554 GTEX-12WSK-1426-SM-5CVNN 1 B1 6 pieces, well preserved, mucosa is ~1 mm~30% thickness, no notable abnormalities 6.8 Stomach Stomach 0000945 176 410 BP-44437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.980729 183090 0.982161 0.984393 0.841328 21813 1 76 0.00471385 230 0 7.8459e+07 0.0175263 1.13092e+06 7.97029e+07 1.42434e+07 21830 3.89551e+07 0 0.140834 0.984393 0.828197 7.8459e+07 0.00678081 1.78918e+07 7.01471e+07 1.80235e+07 178 1.80218e+07 1.76146e+07 0.00574348 1.8164e+07 50.1965 0.0141891 0.988057 0 50.1833 GTEX-12WSK-1526-SM-5CVNO 2 B1 6 pieces, mucosa moderately autolyzed but lymphoid aggregates well preserved, ~5-10% of sections; rep one delineated. 6 Small Intestine Small Intestine - Terminal Ileum 0001211 182 404 BP-44437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.986042 210022 0.973716 0.990169 0.809765 24217 1 76 0.0049726 165 0 8.20591e+07 0.0260401 1.00757e+06 8.28738e+07 1.6279e+07 24252 4.07194e+07 0 0.163951 0.990169 0.801805 8.20591e+07 0.00715352 1.79223e+07 9.50695e+06 1.80642e+07 185 1.80539e+07 1.17762e+07 0.00605851 1.82408e+07 50.2575 0.0121579 0.994297 0 50.1972 GTEX-12WSK-1926-SM-5LZVK 1 B1 2 pieces, post menopausal-type atrophy, prominent corproa albicantia 7.7 Ovary Ovary 0000992 193 393 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.991451 218871 0.964762 0.992525 0.743229 22421 1 76 0.00244092 140 0 6.80346e+07 0.0349757 197540 6.8547e+07 3.23369e+06 22461 3.3871e+07 0 0.221533 0.992525 0.737673 6.80346e+07 0.00311321 1.48824e+07 6.95314e+06 1.49782e+07 144 1.49813e+07 1.19135e+07 0.0027767 1.49532e+07 49.9531 0.00288182 0.993599 0 50.1604 GTEX-12WSK-2026-SM-5CVNB 1 B1 2 pieces, all myometrium; no endometrial glands/stroma 6.5 Uterus Uterus 0000995 194 392 BP-45390 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.986058 220853 0.974912 0.990105 0.838457 22950 1 76 0.00475983 155 0 7.9721e+07 0.0247005 234259 8.05177e+07 1.41908e+07 22969 3.95518e+07 0 0.136455 0.990105 0.830161 7.9721e+07 0.00682788 1.73124e+07 8.04651e+06 1.74542e+07 164 1.74833e+07 1.59029e+07 0.00578963 1.75911e+07 50.1537 0.00290941 0.994152 0 50.2039 GTEX-12WSK-2126-SM-5CVNC 0 B1 6 pieces, minimal dermal fat; squamous epithelium is ~ 40-60 microns 7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 196 390 BP-45390 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.98383 246528 0.97528 0.988354 0.830839 22522 1 76 0.00493485 186 0 7.70544e+07 0.0244852 503972 7.79623e+07 1.59944e+07 22538 3.82242e+07 0 0.144442 0.988354 0.821163 7.70544e+07 0.00711808 1.68617e+07 1.15837e+07 1.70317e+07 166 1.70972e+07 1.37601e+07 0.00602147 1.71304e+07 50.0484 0.0064643 0.992878 0 50.2507 GTEX-12WSK-2226-SM-5GCO5 0 B1 2 pieces, well preserved but inactive appearing TDLUs in one section, rep delineated 6.9 Breast Breast - Mammary Tissue 0008367 213 373 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.985839 201780 0.979094 0.990715 0.843277 22532 1 76 0.00198234 160 0 6.94809e+07 0.0205619 294304 7.0132e+07 6.24718e+06 22548 3.4484e+07 0 0.135817 0.990715 0.835448 6.94809e+07 0.00325214 1.52265e+07 6.06457e+06 1.53136e+07 167 1.53754e+07 1.35976e+07 0.00261412 1.54883e+07 50.183 0.00419643 0.995592 0 50.1426 GTEX-12WSK-2326-SM-5GCOH 0 B1 6 pieces, minimal dermal fat, squamous epithelium is ~30 microns 7.7 Skin Skin - Sun Exposed (Lower leg) 0004264 208 378 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.982953 353289 0.96269 0.988547 0.771421 22505 1 76 0.00223414 143 0 5.67058e+07 0.0371026 504071 5.73628e+07 4.78314e+06 22522 2.81184e+07 0 0.19127 0.988547 0.762586 5.67058e+07 0.00378763 1.23042e+07 1.06234e+07 1.23462e+07 131 1.24149e+07 9.12545e+06 0.00300649 1.25448e+07 50.2604 0.00878742 0.994141 0 50.0852 GTEX-12WSK-2626-SM-5GCOT 0 B1 2 pieces, clean specimens 7.4 Nerve Nerve - Tibial 0001323 215 371 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.984373 225395 0.970158 0.989458 0.788265 23295 1 76 0.00211212 184 0 7.46918e+07 0.0295517 313463 7.54876e+07 6.56437e+06 23328 3.7037e+07 0 0.181893 0.989458 0.779956 7.46918e+07 0.00343045 1.64017e+07 6.11156e+06 1.65077e+07 178 1.65727e+07 1.23192e+07 0.0027679 1.67025e+07 50.195 0.00415251 0.994544 0 50.161 GTEX-12WSK-2726-SM-5CVND 0 B1 2 pieces, clean specimens 7.2 Blood Vessel Artery - Tibial 0007610 218 368 BP-45390 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.988068 161523 0.977206 0.991498 0.860686 20377 1 76 0.00459601 132 0 6.28358e+07 0.0223807 236495 6.33747e+07 1.08332e+07 20385 3.11839e+07 0 0.11652 0.991498 0.853368 6.28358e+07 0.00675586 1.34419e+07 5.07966e+06 1.35237e+07 136 1.35222e+07 1.27964e+07 0.0056722 1.36479e+07 50.2314 0.0037317 0.994927 0 50.1517 GTEX-12WSK-5005-SM-AN3Y3 B1 Heart Heart - Left Ventricle 0006566 149 ChIP-Seq GTEX-12WSK-5015-SM-AN3Y2 B1 Muscle Muscle - Skeletal 0011907 213 ChIP-Seq GTEX-12WSL-0002-SM-664MF B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -76 BP-45438 RNA isolation_Trizol Manual (Cell Pellet) 11/04/2013 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.992025 840731 0.966836 0.992835 0.812037 21989 1 76 0.00241968 281 0 1.17528e+08 0.0318743 708606 1.18377e+08 7.35576e+06 22038 5.84614e+07 0 0.154799 0.992835 0.806219 1.17528e+08 0.00320695 2.62128e+07 1.93072e+07 2.62493e+07 300 2.62154e+07 2.62859e+07 0.00281299 2.63484e+07 50.1265 0.00598604 0.993644 0 50.0347 GTEX-12WSL-0003-SM-5ANFZ B1 Blood Whole Blood 0013756 -76 BP-42123 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/09/2013 LCSET-4718 02/04/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-12WSL-0003-SM-5DWRL B1 Blood Whole Blood 0013756 -76 BP-42123 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/09/2013 GTEx_OM25_Dec_01 01/28/2014 Illumina OMNI SNP Array OMNI GTEX-12WSL-0003-SM-6WSBO B1 Blood Whole Blood 0013756 -76 BP-42123 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/09/2013 LCSET-6066 09/26/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-12WSL-0005-SM-5NQAD B1 8.2 Blood Whole Blood 0013756 -76 BP-42129 RNA isolation_PAXgene Blood RNA (Manual) 08/09/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.986935 756250 0.9586 0.989909 0.812378 17956 1 76 0.0025259 131 0 7.66255e+07 0.0408277 233375 7.74065e+07 1.17085e+07 17961 3.81091e+07 0 0.146222 0.989909 0.80418 7.66255e+07 0.00545865 1.68157e+07 6.11234e+07 1.70469e+07 146 1.70593e+07 1.71519e+07 0.00398787 1.70252e+07 49.9499 0.00301493 0.992884 0 50.3414 GTEX-12WSL-0008-SM-664MM B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 353 BP-46001 RNA isolation_Trizol Manual (Cell Pellet) 11/20/2013 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.994206 443335 0.977632 0.994726 0.870956 20274 1 76 0.00192503 286 0 1.03763e+08 0.0220659 195478 1.04313e+08 6.14169e+06 20288 5.17201e+07 0 0.106676 0.994726 0.866362 1.03763e+08 0.00253207 2.32495e+07 1.47193e+07 2.33196e+07 278 2.32961e+07 2.61419e+07 0.00222839 2.33321e+07 50.0386 0.00187395 0.995245 0 50.0753 GTEX-12WSL-0226-SM-5CVMJ 1 B1 2 pieces; 20% macrovesicular steatosis 6.7 Liver Liver 0001114 209 644 BP-45390 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.987386 217798 0.979569 0.991163 0.855336 20380 1 76 0.00502274 121 0 7.05768e+07 0.0188716 878046 7.1206e+07 1.38589e+07 20391 3.49984e+07 0 0.124233 0.991163 0.847778 7.05768e+07 0.00709652 1.55159e+07 1.21373e+07 1.55038e+07 152 1.55132e+07 1.22469e+07 0.00605568 1.57564e+07 50.3889 0.0123311 0.99494 0 49.9805 GTEX-12WSL-0326-SM-5CVMK 1 B1 2 pieces; 1 with 1 mm fibrofatty capsule 8.1 Adrenal Gland Adrenal Gland 0002369 213 640 BP-45390 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.987299 211168 0.978541 0.991325 0.835096 22406 1 76 0.00493266 133 0 6.84352e+07 0.0211806 1.71893e+06 6.90341e+07 1.31596e+07 22422 3.3971e+07 0 0.143445 0.991325 0.827852 6.84352e+07 0.00724091 1.52102e+07 9.36887e+06 1.51794e+07 151 1.52096e+07 1.04447e+07 0.0060821 1.5419e+07 50.3419 0.0248997 0.995352 0 49.9493 GTEX-12WSL-0426-SM-5GCNX 1 B1 2 pieces;[PREVIOUS REVIEW BEFORE RESOLUTION: Heart NOT Pancreas; 10% internal fat in 1 piece;] AFTER RESOLUTION: Pancreas with 60% external fat; foci of atrophy & fibrosis (annotated). 7.4 Pancreas Pancreas 0001150 218 635 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.98689 215100 0.976577 0.991345 0.837749 22419 1 76 0.00224949 124 0 8.19073e+07 0.023196 335630 8.26224e+07 6.93293e+06 22442 4.06778e+07 0 0.138828 0.991345 0.830499 8.19073e+07 0.00339407 1.86832e+07 1.97945e+07 1.87875e+07 139 1.88436e+07 2.20797e+07 0.00281921 1.89882e+07 50.1911 0.00406222 0.995801 0 50.1391 GTEX-12WSL-0626-SM-5GCOY 1 B1 2 pieces; small focus [0.3 mm] parathyroid in 1 piece; 20% fat in 1 piece 7.5 Thyroid Thyroid 0002046 230 623 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.985934 208011 0.965482 0.990329 0.738226 23868 1 76 0.00208583 129 0 6.51773e+07 0.034214 155278 6.58138e+07 5.08076e+06 23899 3.2351e+07 0 0.227256 0.990329 0.731086 6.51773e+07 0.0032823 1.42078e+07 5.70998e+06 1.42769e+07 140 1.43605e+07 1.04558e+07 0.00268141 1.43927e+07 50.056 0.00235935 0.994724 0 50.1212 GTEX-12WSL-0926-SM-5N9EK 1 B1 2 pieces; non-compromising atheromatous plaques; 2.5 x 0.4 mm external fat on 1 7.1 Blood Vessel Artery - Coronary 0001621 250 603 BP-44437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.989325 385521 0.976494 0.990906 0.864011 23843 1 76 0.00381075 287 0 1.27801e+08 0.0232049 677646 1.28974e+08 6.24728e+06 23864 6.35618e+07 0 0.112483 0.990906 0.856153 1.27801e+08 0.00387116 2.77112e+07 1.0745e+07 2.80481e+07 330 2.79517e+07 2.47973e+07 0.0038409 2.80015e+07 50.0445 0.00525411 0.992486 0 50.3021 GTEX-12WSL-1026-SM-5CVNJ 1 B1 2 pieces; bronchus and large blood vessel comprise 50% of 1 piece 8.3 Lung Lung 0008952 265 588 BP-44437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.986901 280320 0.976763 0.990754 0.818149 24037 1 76 0.00478456 166 0 8.43791e+07 0.0228715 375825 8.51665e+07 1.5559e+07 24057 4.18794e+07 0 0.158614 0.990754 0.810585 8.43791e+07 0.00687512 1.86089e+07 8.13066e+06 1.87536e+07 176 1.88154e+07 1.60939e+07 0.00582577 1.88568e+07 50.0549 0.00441283 0.994608 0 50.1936 GTEX-12WSL-1126-SM-5CVNK 1 B1 2 pieces 8.1 Adipose Tissue Adipose - Visceral (Omentum) 0010414 269 584 BP-44437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.987064 253964 0.977152 0.990665 0.83684 23016 1 76 0.0047626 172 0 8.16616e+07 0.02255 453028 8.24311e+07 1.55747e+07 23035 4.0548e+07 0 0.140313 0.990665 0.829028 8.16616e+07 0.00675324 1.78914e+07 8.00422e+06 1.80857e+07 186 1.81114e+07 1.44368e+07 0.0057543 1.81438e+07 50.0447 0.00549584 0.994267 0 50.27 GTEX-12WSL-1226-SM-5DUXE 1 B1 6 pieces; 3 are all muscle, 3 have 20-30% fibrofatty stroma 8 Esophagus Esophagus - Gastroesophageal Junction 0004550 276 577 BP-44437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.989222 243017 0.977548 0.992278 0.844593 20728 1 76 0.00181928 144 0 5.94675e+07 0.0221449 565768 5.99303e+07 5.53952e+06 20742 2.95793e+07 0 0.132955 0.992278 0.83807 5.94675e+07 0.00289762 1.29138e+07 5.39238e+06 1.29983e+07 144 1.30183e+07 1.11709e+07 0.00235679 1.30647e+07 50.0889 0.00944043 0.995333 0 50.163 GTEX-12WSL-1326-SM-5LZVW 0 B1 6 pieces; well dissected muscle 8.3 Esophagus Esophagus - Muscularis 0004648 286 567 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.991562 244260 0.977133 0.993112 0.842595 22027 1 76 0.00236581 169 0 7.36997e+07 0.0225626 464583 7.42109e+07 3.66503e+06 22040 3.67006e+07 0 0.134539 0.993112 0.836791 7.36997e+07 0.00301873 1.61952e+07 6.02424e+06 1.63225e+07 181 1.63283e+07 1.40932e+07 0.00269176 1.62969e+07 49.952 0.00626031 0.994662 0 50.1956 GTEX-12WSL-1526-SM-5GCP8 0 B1 5 pieces; well dissected mucosa with prominent muscularis mucosae 8.8 Esophagus Esophagus - Mucosa 0006920 291 562 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.985536 233900 0.977389 0.989885 0.844337 21977 1 76 0.00210779 142 0 6.72048e+07 0.0223182 265302 6.78915e+07 5.61796e+06 21989 3.33849e+07 0 0.133051 0.989885 0.835797 6.72048e+07 0.00324091 1.51119e+07 9.30152e+06 1.51695e+07 152 1.52596e+07 1.4169e+07 0.00267186 1.53049e+07 50.074 0.00390773 0.994234 0 50.0952 GTEX-12WSL-1626-SM-5GCMU 2 B1 6 pieces; partly autolyzed mucosa with variable amounts of muscularis 7.6 Colon Colon - Transverse 0001157 293 560 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.98589 275955 0.975352 0.990543 0.837579 22671 1 76 0.00202884 172 0 7.50646e+07 0.0243449 815766 7.57813e+07 6.49764e+06 22686 3.72703e+07 0 0.137773 0.990543 0.829658 7.50646e+07 0.00320266 1.62807e+07 7.23694e+06 1.63345e+07 190 1.64015e+07 1.36274e+07 0.00261299 1.65398e+07 50.2099 0.0107647 0.995195 0 50.0826 GTEX-12WSL-1826-SM-5LZW9 1 B1 6 pieces; well dissected muscularis 7.2 Colon Colon - Sigmoid 0001159 310 543 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.992283 222256 0.973216 0.993519 0.806986 22533 1 76 0.00245982 165 0 7.37801e+07 0.0265513 476718 7.42614e+07 3.61583e+06 22555 3.67501e+07 0 0.16623 0.993519 0.801756 7.37801e+07 0.00306905 1.60132e+07 6.73529e+06 1.6184e+07 177 1.61699e+07 1.24206e+07 0.00276406 1.61161e+07 49.9167 0.00641946 0.994754 0 50.2652 GTEX-12WSL-2026-SM-5GCML 1 B1 6 pieces; <10% intradermal fat 7.3 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 326 527 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.984921 261520 0.974773 0.990062 0.835332 23784 1 76 0.00206797 212 0 8.25541e+07 0.0249974 431862 8.33827e+07 7.30002e+06 23805 4.09651e+07 0 0.139442 0.990062 0.82703 8.25541e+07 0.00348411 1.80822e+07 8.40863e+06 1.82477e+07 223 1.8319e+07 1.44698e+07 0.00277236 1.84155e+07 50.1313 0.00517927 0.995203 0 50.2277 GTEX-12WSL-2126-SM-5GCNG 0 B1 3 pieces; well preserved, well dissected glands 8.2 Salivary Gland Minor Salivary Gland 0006330 329 524 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.982019 253924 0.970028 0.987623 0.766005 23069 1 76 0.00234866 127 0 5.83167e+07 0.0293291 271847 5.90476e+07 5.05953e+06 23086 2.89046e+07 0 0.204024 0.987623 0.756524 5.83167e+07 0.0037809 1.3052e+07 9.70379e+06 1.30245e+07 134 1.31327e+07 9.27489e+06 0.00306071 1.32614e+07 50.2438 0.00460387 0.993228 0 49.9472 GTEX-12WSL-2326-SM-5DUXQ 2 B1 2 pieces; spermatogenesis 6.2 Testis Testis 0000473 344 509 BP-44437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.987637 284631 0.924314 0.990108 0.719041 31788 1 76 0.00203276 133 0 6.20082e+07 0.0753565 328431 6.26277e+07 5.78737e+06 31831 3.0857e+07 0 0.205273 0.990108 0.711928 6.20082e+07 0.00307757 1.26726e+07 9.5471e+06 1.2721e+07 127 1.27639e+07 9.86233e+06 0.00255386 1.27676e+07 50.0073 0.00524418 0.992579 0 50.0952 GTEX-12WSL-2426-SM-5GCN7 1 B1 2 pieces; 1 piece has 40% fibrous component; other has a large central defect (40%) 7.8 Adipose Tissue Adipose - Subcutaneous 0002190 347 506 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.984155 272614 0.978589 0.989351 0.836105 22489 1 76 0.00213462 174 0 8.06659e+07 0.0203673 79581 8.15341e+07 6.87955e+06 22502 4.00009e+07 0 0.142484 0.989351 0.827201 8.06659e+07 0.00339914 1.75985e+07 8.67147e+06 1.77297e+07 202 1.78641e+07 1.65388e+07 0.00276356 1.78669e+07 50.0039 0.000976045 0.994548 0 50.1856 GTEX-12WSL-2526-SM-5GCNJ 1 B1 6 pieces; 10% intradermal fat 8.1 Skin Skin - Sun Exposed (Lower leg) 0004264 353 500 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.984277 228350 0.975912 0.989122 0.793442 22616 1 76 0.00214855 144 0 6.50847e+07 0.0238086 120103 6.58004e+07 6.01798e+06 22640 3.2305e+07 0 0.18247 0.989122 0.784811 6.50847e+07 0.00328399 1.43117e+07 6.58227e+06 1.43603e+07 142 1.44755e+07 1.23631e+07 0.00271349 1.44994e+07 50.0413 0.00182526 0.993968 0 50.0849 GTEX-12WSL-2626-SM-5GCNV 0 B1 2 pieces; well trimmed, no fatty tissue 7.9 Blood Vessel Artery - Tibial 0007610 354 499 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.985914 188914 0.9781 0.990549 0.858253 20191 1 76 0.00195032 129 0 5.73237e+07 0.021487 204682 5.78706e+07 5.11912e+06 20200 2.84512e+07 0 0.119847 0.990549 0.850142 5.73237e+07 0.00327809 1.23486e+07 4.3433e+06 1.24088e+07 137 1.24553e+07 1.20223e+07 0.0026111 1.25529e+07 50.1951 0.00353689 0.995185 0 50.1215 GTEX-12WSL-2726-SM-5CVNL 0 B1 2 pieces; 1 with 1 mm dense fibrous border on one edge; other piece has 20% internal fat 8.7 Muscle Muscle - Skeletal 0011907 355 498 BP-44437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.987913 234967 0.982054 0.991541 0.865243 20258 1 76 0.00467666 147 0 7.4757e+07 0.0176854 483929 7.53948e+07 1.45486e+07 20271 3.71275e+07 0 0.116811 0.991541 0.857924 7.4757e+07 0.00666086 1.61709e+07 8.27890e+06 1.61628e+07 153 1.62178e+07 1.56164e+07 0.00566513 1.63658e+07 50.2271 0.0064186 0.995168 0 49.9874 GTEX-12WSL-2826-SM-5LZWL 0 B1 2 pieces; well trimmed, but 20% internal fat 5.7 Nerve Nerve - Tibial 0001323 356 497 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.99065 209760 0.970427 0.991982 0.76732 23255 1 76 0.00249441 156 0 6.72856e+07 0.0292989 196279 6.78294e+07 3.34796e+06 23282 3.34934e+07 0 0.203108 0.991982 0.761167 6.72856e+07 0.00321427 1.48317e+07 5.79372e+06 1.49295e+07 150 1.49345e+07 1.12383e+07 0.00285386 1.49137e+07 49.9651 0.00289371 0.993314 0 50.1643 GTEX-12WSL-5001-SM-AN3XD B1 Heart Heart - Left Ventricle 0006566 240 ChIP-Seq GTEX-12WSL-5016-SM-AN3XE B1 Muscle Muscle - Skeletal 0011907 ChIP-Seq GTEX-12WSM-0001-SM-5ANFP B1 Blood Whole Blood 0013756 707 BP-42167 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/12/2013 LCSET-4718 02/04/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-12WSM-0001-SM-5DWS1 B1 Blood Whole Blood 0013756 707 BP-42167 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/12/2013 GTEx_OM25_Dec_01 01/29/2014 Illumina OMNI SNP Array OMNI GTEX-12WSM-0001-SM-6WSBS B1 Blood Whole Blood 0013756 707 BP-42167 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/12/2013 LCSET-6066 09/29/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-12WSM-0005-SM-5NQB3 B1 8.3 Blood Whole Blood 0013756 707 BP-42239 RNA isolation_PAXgene Blood RNA (Manual) 08/13/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.950325 277434 0.98536 0.954009 0.805532 17618 1 76 0.00276166 110 0 9.41323e+07 0.0126089 163857 9.86702e+07 1.56737e+07 17620 4.67018e+07 0 0.179827 0.954009 0.768485 9.41323e+07 0.00601728 2.22416e+07 1.57146e+08 2.25451e+07 146 2.25875e+07 2.63564e+07 0.00438318 2.25777e+07 49.9891 0.00166065 0.957693 0 50.3388 GTEX-12WSM-0008-SM-5S2VD B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 839 BP-46001 RNA isolation_Trizol Manual (Cell Pellet) 11/20/2013 LCSET-4996 04/03/2014 TruSeq.v1 RNASEQ 0.991851 396956 0.971129 0.994293 0.832506 21477 1 76 0.00175356 185 0 7.91775e+07 0.0285325 350365 7.96319e+07 7.85205e+06 21502 3.9415e+07 0 0.138623 0.994293 0.827754 7.91775e+07 0.00276167 1.74334e+07 1.24474e+07 1.7595e+07 184 1.76048e+07 1.72756e+07 0.00225638 1.76159e+07 50.0158 0.0043998 0.996734 0 50.2307 GTEX-12WSM-0011-R10a-SM-5DUWV B1, A1 7.8 Brain Brain - Frontal Cortex (BA9) 0009834 694 BP-44878 RNA isolation_PAXgene Tissue miRNA 10/22/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.987305 689506 0.960645 0.991065 0.83912 23467 1 76 0.00201911 198 0 7.97035e+07 0.0387063 2.62064e+06 8.04221e+07 8.04226e+06 23486 3.96024e+07 0 0.121525 0.991065 0.831622 7.97035e+07 0.00309024 1.73287e+07 1.95923e+07 1.73065e+07 253 1.73378e+07 1.12842e+07 0.00255264 1.75726e+07 50.3364 0.0325861 0.994825 0 49.968 GTEX-12WSM-0011-R10a-SM-AHZ6F B1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 694 ChIP-Seq GTEX-12WSM-0011-R10a-SM-CYKRA B1, A1 7.8 Brain Brain - Frontal Cortex (BA9) 0009834 694 BP-44878 RNA isolation_PAXgene Tissue miRNA 10/22/2013 RIP-Seq GTEX-12WSM-0011-R11a-SM-5DUX8 B1, A1 8.5 Brain Brain - Cerebellar Hemisphere 0002037 694 BP-44878 RNA isolation_PAXgene Tissue miRNA 10/22/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.986922 613752 0.947164 0.99045 0.756294 23010 1 76 0.00216119 127 0 6.64157e+07 0.0522996 813712 6.70561e+07 6.2142e+06 23035 3.29923e+07 0 0.190869 0.99045 0.749072 6.64157e+07 0.00325998 1.42752e+07 1.27391e+07 1.4315e+07 156 1.43895e+07 9.1874e+06 0.00270863 1.44217e+07 50.056 0.0121348 0.993977 0 50.0697 GTEX-12WSM-0011-R1a-SM-5LZW6 B1, A1 6.3 Brain Brain - Hippocampus 0001954 694 BP-44020 RNA isolation_PAXgene Tissue miRNA 09/27/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.99202 303764 0.964091 0.993071 0.844683 21728 1 76 0.00281957 152 0 6.04674e+07 0.0357654 4.783e+06 6.08893e+07 2.8147e+06 21741 3.00969e+07 0 0.119408 0.993071 0.83883 6.04674e+07 0.00353984 1.31273e+07 1.38552e+07 1.3449e+07 196 1.32205e+07 4.28634e+06 0.00317933 1.34069e+07 50.35 0.0785524 0.994122 0 50.6052 GTEX-12WSM-0011-R3b-SM-5LZWI B1, A1 6.3 Brain Brain - Anterior cingulate cortex (BA24) 0009835 694 BP-44020 RNA isolation_PAXgene Tissue miRNA 09/27/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.991974 542527 0.959109 0.993363 0.836119 22804 1 76 0.00262946 197 0 7.09671e+07 0.0406119 4.0255e+06 7.14412e+07 3.60699e+06 22816 3.53389e+07 0 0.122991 0.993363 0.830569 7.09671e+07 0.00331646 1.53266e+07 1.71748e+07 1.56297e+07 238 1.55252e+07 7.20991e+06 0.00297248 1.55169e+07 49.9867 0.056347 0.994752 0 50.4897 GTEX-12WSM-0011-R5a-SM-5EQ4Y B1, A1 8.2 Brain Brain - Caudate (basal ganglia) 0001873 694 BP-44999 RNA isolation_PAXgene Tissue miRNA 10/24/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.989507 739922 0.956383 0.992954 0.844038 22207 1 76 0.00220775 267 0 7.45014e+07 0.0433464 4.76657e+06 7.503e+07 9.75152e+06 22216 3.70276e+07 0 0.112345 0.992954 0.838091 7.45014e+07 0.00339019 1.60262e+07 2.83461e+07 1.61011e+07 263 1.5923e+07 7.33676e+06 0.00279692 1.6463e+07 50.8338 0.0635288 0.996402 0 50.1166 GTEX-12WSM-0011-R6b-SM-5EQ6N B1, A1 8.4 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 694 BP-44999 RNA isolation_PAXgene Tissue miRNA 10/24/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.990333 739772 0.957275 0.9927 0.811806 23612 1 76 0.00242578 369 0 9.53599e+07 0.042575 7.60554e+06 9.60611e+07 1.14647e+07 23628 4.74575e+07 0 0.14547 0.9927 0.80588 9.53599e+07 0.00350525 2.0339e+07 4.10802e+07 2.04629e+07 345 2.0235e+07 6.78183e+06 0.00296423 2.07836e+07 50.6688 0.079174 0.995068 0 50.1519 GTEX-12WSM-0011-R7b-SM-5EGLD B1, A1 7.7 Brain Brain - Putamen (basal ganglia) 0001874 694 BP-44999 RNA isolation_PAXgene Tissue miRNA 10/24/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.985503 577700 0.965258 0.989344 0.824208 22809 1 76 0.00232237 268 0 9.48713e+07 0.0345768 7.57971e+06 9.58932e+07 9.16306e+06 22820 4.71564e+07 0 0.14105 0.989344 0.815425 9.48713e+07 0.00351382 2.02516e+07 4.79711e+07 2.02714e+07 328 2.00835e+07 7.44344e+06 0.00291578 2.07754e+07 50.8467 0.0790433 0.993185 0 50.0244 GTEX-12WSM-0011-R8a-SM-5DUWJ B1, A1 7.6 Brain Brain - Hypothalamus 0001898 694 BP-44878 RNA isolation_PAXgene Tissue miRNA 10/22/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.987834 598297 0.957039 0.990791 0.794765 24483 1 76 0.00231188 199 0 7.66758e+07 0.0427178 4.39661e+06 7.73885e+07 6.89539e+06 24509 3.81328e+07 0 0.162274 0.990791 0.787446 7.66758e+07 0.00337139 1.64228e+07 2.9086e+07 1.64201e+07 253 1.63577e+07 6.99904e+06 0.00284005 1.6694e+07 50.5087 0.0568122 0.993747 0 49.9959 GTEX-12WSM-0226-SM-5LZV6 0 B1 2 pieces fascia/fibrous tissue is ~10-15% total 6.1 Adipose Tissue Adipose - Subcutaneous 0002190 842 1061 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.988042 231688 0.974085 0.989689 0.801588 22682 1 76 0.00267505 146 0 6.9316e+07 0.0255986 401545 7.00382e+07 3.62197e+06 22704 3.4485e+07 0 0.172498 0.989689 0.793323 6.9316e+07 0.00347183 1.51414e+07 7.81083e+06 1.53544e+07 163 1.53479e+07 1.14742e+07 0.00307278 1.52549e+07 49.8482 0.00573323 0.991336 0 50.3492 GTEX-12WSM-0326-SM-5LZVI 0 B1 2 pieces, fat is < 5% total, rep foci delineated 8.1 Muscle Muscle - Skeletal 0011907 845 1058 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.992993 222496 0.984829 0.99418 0.866184 19302 1 76 0.00243624 155 0 7.10577e+07 0.0150055 670608 7.14736e+07 3.53462e+06 19312 3.54094e+07 0 0.118645 0.99418 0.861142 7.10577e+07 0.00303565 1.54876e+07 1.1696e+07 1.5791e+07 179 1.56889e+07 1.2799e+07 0.00273559 1.56628e+07 49.9584 0.00938259 0.995366 0 50.4849 GTEX-12WSM-0326-SM-CYKW3 0 B1 2 pieces, fat is < 5% total, rep foci delineated 8.1 Muscle Muscle - Skeletal 0011907 845 1058 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 RIP-Seq GTEX-12WSM-0426-SM-5LZVU 0 B1 2 pieces, no adherent fat, good specimens 6.8 Nerve Nerve - Tibial 0001323 847 1056 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.990141 165690 0.968265 0.991226 0.777136 23022 1 76 0.0025385 150 0 6.35961e+07 0.0314448 235391 6.4159e+07 3.07777e+06 23050 3.16522e+07 0 0.191129 0.991226 0.770317 6.35961e+07 0.00326071 1.39822e+07 5.92571e+06 1.40468e+07 149 1.40346e+07 1.00456e+07 0.00289921 1.40611e+07 50.0472 0.00366887 0.992312 0 50.1153 GTEX-12WSM-0526-SM-5GCO8 0 B1 2 pieces, Monckeberg's medial sclerosis/calcifications present, rep delineated 6.4 Blood Vessel Artery - Tibial 0007610 848 1055 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.981416 309057 0.973278 0.986672 0.836396 20828 1 76 0.00212962 149 0 7.2255e+07 0.0263659 250237 7.3231e+07 6.17471e+06 20844 3.58019e+07 0 0.136882 0.986672 0.825248 7.2255e+07 0.00361647 1.53211e+07 6.7961e+06 1.54152e+07 168 1.54431e+07 1.39586e+07 0.00286908 1.56542e+07 50.3395 0.00341709 0.991929 0 50.1531 GTEX-12WSM-0626-SM-5GCOK 0 B1 2 pieces, ~5% fibro/fascia tissue, rep delineated 7.1 Adipose Tissue Adipose - Visceral (Omentum) 0010414 969 934 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.983796 258635 0.974986 0.989215 0.796229 22850 1 76 0.00225891 134 0 6.20484e+07 0.0247018 149234 6.27248e+07 5.18265e+06 22867 3.07673e+07 0 0.178757 0.989215 0.787642 6.20484e+07 0.00365098 1.3606e+07 6.71049e+06 1.36349e+07 145 1.37263e+07 1.05168e+07 0.00295113 1.38344e+07 50.1962 0.00237919 0.994635 0 50.0532 GTEX-12WSM-0726-SM-5GCOW 1 B1 2 pieces, ~ 5% macrovesicular fat. 5.9 Liver Liver 0001114 971 932 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.984293 313460 0.972499 0.989101 0.820552 21439 1 76 0.0024771 267 0 8.10985e+07 0.0274018 1.59644e+06 8.19921e+07 7.06124e+06 21454 4.02595e+07 0 0.151946 0.989101 0.81161 8.10985e+07 0.00368732 1.75989e+07 2.03779e+07 1.75108e+07 257 1.76e+07 9.62684e+06 0.00307927 1.7853e+07 50.3568 0.0194706 0.99391 0 49.8745 GTEX-12WSM-1326-SM-5GCP9 2 B1 2 pieces, marked tubular atrophy, diffuse, no Leydig hyperplasia noted. Rare foci of spermatogenesis but moderately-markedly autolyzed 6.1 Testis Testis 0000473 1002 901 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.984449 376605 0.94082 0.989009 0.68358 32820 1 76 0.00233146 167 0 8.53026e+07 0.0588831 506248 8.62506e+07 7.1131e+06 32892 4.23303e+07 0 0.25724 0.989009 0.676067 8.53026e+07 0.00353084 1.8037e+07 1.02049e+07 1.81278e+07 169 1.82525e+07 1.24488e+07 0.00292839 1.82703e+07 50.0244 0.0058695 0.993569 0 50.1256 GTEX-12WSM-1426-SM-5GCPA 3 B1 3 pieces ~10% 'contaminant' mucosa, totally autolyzed 6.4 Colon Colon - Sigmoid 0001159 1010 893 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.987461 219241 0.968699 0.991286 0.826006 22379 1 76 0.00218728 271 0 8.91115e+07 0.0311346 1.75811e+06 8.98949e+07 7.08768e+06 22401 4.42805e+07 0 0.142692 0.991286 0.818809 8.91115e+07 0.00316487 1.90908e+07 9.42279e+06 1.90519e+07 273 1.90763e+07 1.21909e+07 0.00267419 1.93775e+07 50.3916 0.0195574 0.995111 0 49.949 GTEX-12WSM-1726-SM-5BC6J 1 B1 2 pieces, fibroadipose tissue only, no ductal elements 6.1 Breast Breast - Mammary Tissue 0008367 1014 889 BP-43916 RNA Extraction from Paxgene-derived Lysate Plate Based 09/24/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.988581 190128 0.974974 0.992276 0.814624 21894 1 76 0.00282758 134 0 5.95830e+07 0.024744 295667 6.00468e+07 1.51532e+07 21911 2.96136e+07 0 0.160351 0.992276 0.808332 5.95830e+07 0.00504533 1.29821e+07 8.33626e+06 1.3096e+07 144 1.31144e+07 9.13643e+06 0.00393232 1.31722e+07 50.1101 0.00492394 0.995972 0 50.2184 GTEX-12WSM-1826-SM-5BC64 1 B1 2 pieces, ~80% glandular elements (delineated), good specimen 7.2 Salivary Gland Minor Salivary Gland 0006330 1019 884 BP-43916 RNA Extraction from Paxgene-derived Lysate Plate Based 09/24/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.981382 310914 0.975881 0.985016 0.808672 23119 1 76 0.00319155 223 0 7.95593e+07 0.0222801 145975 8.07695e+07 1.98925e+07 23145 3.94728e+07 0 0.16721 0.985016 0.796555 7.95593e+07 0.00555487 1.83662e+07 3.33129e+07 1.81614e+07 205 1.82685e+07 1.31823e+07 0.00436885 1.85395e+07 50.3682 0.0018073 0.988651 0 49.7198 GTEX-12WSM-1926-SM-5BC65 0 B1 6 pieces squamous epithelium is ~50 microns. Minimal dermal fat 6.3 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1023 880 BP-43916 RNA Extraction from Paxgene-derived Lysate Plate Based 09/24/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.987622 289441 0.972854 0.991627 0.770693 23829 1 76 0.00278123 183 0 8.00033e+07 0.0268617 381296 8.06788e+07 2.04562e+07 23865 3.97299e+07 0 0.202161 0.991627 0.76424 8.00033e+07 0.00508094 1.74285e+07 1.05167e+07 1.76137e+07 179 1.76553e+07 1.26702e+07 0.00392644 1.76916e+07 50.0514 0.0047261 0.995631 0 50.2643 GTEX-12WSM-2126-SM-5GCOC 1 B1 2 pieces, no abnormalities noted 6.4 Brain Brain - Cerebellum 0002037 1106 797 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.984598 260292 0.9472 0.989137 0.724597 22973 1 76 0.00250275 109 0 5.88272e+07 0.0525103 868099 5.94733e+07 5.05894e+06 22991 2.91998e+07 0 0.222604 0.989137 0.716726 5.88272e+07 0.0037191 1.26273e+07 1.05786e+07 1.27267e+07 134 1.27918e+07 6.64353e+06 0.00310813 1.28072e+07 50.0299 0.0145965 0.993676 0 50.1961 GTEX-12WSM-2226-SM-5DUVS 1 B1 1 piece, adhenohypophysis and focal dura (delineated) 6.8 Pituitary Pituitary 0000007 1108 795 BP-44437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.988047 434543 0.962445 0.991726 0.765993 25210 1 76 0.00196677 160 0 7.50697e+07 0.037264 558425 7.5696e+07 6.88323e+06 25243 3.73041e+07 0 0.196452 0.991726 0.759655 7.50697e+07 0.00315531 1.61049e+07 1.16136e+07 1.62618e+07 178 1.63243e+07 1.15642e+07 0.00255884 1.63026e+07 49.9667 0.0073772 0.995405 0 50.2423 GTEX-12WSN-0001-SM-664MG B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -22 BP-45438 RNA isolation_Trizol Manual (Cell Pellet) 11/04/2013 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.991452 780420 0.968504 0.992269 0.806023 21342 1 76 0.00229723 284 0 1.13645e+08 0.0309033 1.02999e+06 1.14531e+08 6.89311e+06 21386 5.65698e+07 0 0.162481 0.992269 0.799792 1.13645e+08 0.00299448 2.52911e+07 1.94727e+07 2.53856e+07 293 2.5355e+07 2.53922e+07 0.00264557 2.54265e+07 50.0704 0.00899316 0.993087 0 50.0932 GTEX-12WSN-0004-SM-5ANGE B1 Blood Whole Blood 0013756 -22 BP-42123 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/09/2013 LCSET-4718 02/04/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-12WSN-0004-SM-5DWRZ B1 Blood Whole Blood 0013756 -22 BP-42123 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/09/2013 GTEx_OM25_Dec_01 01/29/2014 Illumina OMNI SNP Array OMNI GTEX-12WSN-0004-SM-6WSBR B1 Blood Whole Blood 0013756 -22 BP-42123 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/09/2013 LCSET-6235 10/02/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-12WSN-0006-SM-5NQAP B1 8.3 Blood Whole Blood 0013756 -22 BP-42129 RNA isolation_PAXgene Blood RNA (Manual) 08/09/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.987522 823876 0.951917 0.9906 0.762998 19389 1 76 0.00256195 128 0 8.56985e+07 0.0475483 178732 8.65117e+07 1.11956e+07 19407 4.26081e+07 0 0.188918 0.9906 0.755826 8.56985e+07 0.00562613 1.85278e+07 4.94362e+07 1.87324e+07 162 1.8801e+07 1.63407e+07 0.00408928 1.87266e+07 49.9009 0.00206599 0.993678 0 50.2745 GTEX-12WSN-0008-SM-664MI B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 297 BP-46001 RNA isolation_Trizol Manual (Cell Pellet) 11/20/2013 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.993352 486249 0.977134 0.994158 0.860939 20709 1 76 0.00193755 287 0 1.05932e+08 0.0225624 245167 1.06554e+08 6.06299e+06 20733 5.2771e+07 0 0.116195 0.994158 0.855909 1.05932e+08 0.0028206 2.38531e+07 1.63052e+07 2.39042e+07 284 2.38722e+07 2.71348e+07 0.00237872 2.39796e+07 50.1123 0.00230086 0.994964 0 50.0535 GTEX-12WSN-0126-SM-5DUX5 0 B1 2 pieces 6.8 Spleen Spleen 0002106 148 741 BP-44437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.982479 238935 0.96792 0.98576 0.803878 22546 1 76 0.00277785 132 0 6.17504e+07 0.0299106 284258 6.26425e+07 5.80525e+06 22566 3.06312e+07 0 0.164041 0.98576 0.792431 6.17504e+07 0.0039737 1.36271e+07 9.55702e+06 1.37588e+07 145 1.37997e+07 9.89204e+06 0.00337378 1.37791e+07 49.9627 0.00453779 0.989041 0 50.2404 GTEX-12WSN-0226-SM-5DUXH 0 B1 2 pieces; fibromuscular tissue with mesothelial lining 8.5 Heart Heart - Atrial Appendage 0006631 162 727 BP-44437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.991145 219339 0.978533 0.994074 0.848491 20219 1 76 0.00166917 123 0 5.64137e+07 0.0209374 1.08754e+06 5.675e+07 5.04083e+06 20230 2.80637e+07 0 0.130042 0.994074 0.843463 5.64137e+07 0.00273464 1.20382e+07 9.63158e+06 1.19985e+07 143 1.19484e+07 1.00897e+07 0.00220033 1.2235e+07 50.5926 0.0191638 0.997003 0 49.9173 GTEX-12WSN-0326-SM-5GCP6 0 B1 6 pieces; no pathologic changes 5.9 Blood Vessel Artery - Aorta 0001496 166 723 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.984659 213493 0.974447 0.989521 0.832049 21338 1 76 0.00200599 152 0 6.8574e+07 0.0252221 320865 6.93001e+07 5.92373e+06 21354 3.40261e+07 0 0.142398 0.989521 0.82333 6.8574e+07 0.00339885 1.49417e+07 5.85955e+06 1.49601e+07 166 1.49917e+07 1.24815e+07 0.002699 1.52293e+07 50.3931 0.00463008 0.994383 0 50.0307 GTEX-12WSN-0626-SM-5BC61 1 B1 2 pieces; distended alveolar spaces suggestive of emphysema 5.9 Lung Lung 0008952 185 704 BP-43916 RNA Extraction from Paxgene-derived Lysate Plate Based 09/24/2013 LCSET-4455 01/18/2014 TruSeq.v1 EXCLUDE 0.987206 277871 0.973715 0.991582 0.829416 23115 1 76 0.00272304 146 0 6.8294e+07 0.0258123 234216 6.88738e+07 1.90425e+07 23135 3.39194e+07 0 0.144299 0.991582 0.822434 6.8294e+07 0.0050728 1.50549e+07 7.86043e+06 1.52432e+07 153 1.534e+07 1.33334e+07 0.00389273 1.52439e+07 49.843 0.00340066 0.995957 0 50.3108 GTEX-12WSN-0726-SM-5GCMS 1 B1 2 pieces; fibrosis represents about 30% of tissue; variably sized thyroid follicles 7.4 Thyroid Thyroid 0002046 193 696 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.985391 232765 0.964426 0.990271 0.731393 23478 1 76 0.00207878 136 0 6.89376e+07 0.0353244 400911 6.96149e+07 5.50532e+06 23512 3.4216e+07 0 0.233033 0.990271 0.724277 6.89376e+07 0.00337789 1.4996e+07 6.70458e+06 1.50234e+07 152 1.50999e+07 9.9676e+06 0.00272513 1.52323e+07 50.2182 0.00575898 0.99515 0 50.0458 GTEX-12WSN-0826-SM-5GCOF 0 B1 2 pieces well trimmed; scattered well preserved Langerhans islands; <10% externall fat 6.8 Pancreas Pancreas 0001150 202 687 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795,LCSET-5132 03/08/2014 TruSeq.v1 RNASEQ 0.985911 269016 0.973522 0.990613 0.813206 22051 1 76 0.0022458 109 0 7.80405e+07 0.0263124 264965 7.878e+07 6.75762e+06 22071 3.87427e+07 0 0.160316 0.990613 0.805573 7.80405e+07 0.00369111 1.7757e+07 1.82498e+07 1.78294e+07 129 1.78447e+07 2.0416e+07 0.00296503 1.81066e+07 50.3641 0.00336335 0.995315 0 50.1017 GTEX-12WSN-0926-SM-5GCN1 2 B1 2 pieces; one piece 100% fibrovascular and adipose tissue; second piece 10% external fat and 20% focal fibrosis 6.6 Adrenal Gland Adrenal Gland 0002369 205 684 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.985092 152386 0.979275 0.989648 0.809251 21207 1 76 0.00199091 267 0 6.88269e+07 0.0205875 3.29125e+06 6.95469e+07 5.6672e+06 21224 3.41943e+07 0 0.170023 0.989648 0.800874 6.88269e+07 0.00318342 1.50523e+07 2.45857e+07 1.49711e+07 258 1.47822e+07 5.8413e+06 0.00258442 1.55086e+07 51.1991 0.0473242 0.994204 0 49.8648 GTEX-12WSN-1326-SM-5GCNT 1 B1 2 pieces; fibrovascular tissue with ductal structures: gynecomastoid changes 6.9 Breast Breast - Mammary Tissue 0008367 246 643 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.984535 153445 0.976281 0.989397 0.806643 21586 1 76 0.0020226 120 0 5.34917e+07 0.0234785 307350 5.40649e+07 4.72738e+06 21604 2.65573e+07 0 0.169637 0.989397 0.798091 5.34917e+07 0.00332273 1.18084e+07 5.92855e+06 1.18424e+07 133 1.18931e+07 8.46945e+06 0.00266947 1.20025e+07 50.2289 0.00568484 0.994259 0 50.0718 GTEX-12WSN-1426-SM-5GCO6 1 B1 6 pieces; 5-10% intradermal fat 8 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 250 639 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 EXCLUDE 0.984969 227704 0.974076 0.989909 0.799599 23273 1 76 0.00200392 138 0 6.41434e+07 0.0256827 186716 6.47972e+07 5.82411e+06 23293 3.18341e+07 0 0.174477 0.989909 0.79153 6.41434e+07 0.00340098 1.41352e+07 6.42052e+06 1.42341e+07 150 1.43011e+07 1.14814e+07 0.00269896 1.43728e+07 50.1252 0.00288154 0.99485 0 50.1743 GTEX-12WSN-1826-SM-5LZUT 1 B1 5 pieces; well dissected except for some focal fat and fibrous tissue 8.3 Esophagus Esophagus - Gastroesophageal Junction 0004550 266 623 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.992035 213592 0.976547 0.993381 0.835116 22401 1 76 0.00229913 165 0 7.63621e+07 0.023163 527240 7.68709e+07 3.88898e+06 22418 3.80355e+07 0 0.141431 0.993381 0.829589 7.63621e+07 0.00296703 1.6667e+07 6.88084e+06 1.68088e+07 194 1.67983e+07 1.41616e+07 0.00263262 1.6774e+07 49.9638 0.00685877 0.994728 0 50.2117 GTEX-12WSN-2226-SM-5DUXT 1 B1 2 pieces; one piece fibroadipose tissue only; second piece salivary gland with attached squamous mucosa (outlined) and musculo- fibro-adipose tissue (outlined) 6.7 Salivary Gland Minor Salivary Gland 0006330 265 624 BP-44437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.985191 225076 0.973623 0.987447 0.787683 22256 1 76 0.00206112 134 0 6.38907e+07 0.0252099 283809 6.47029e+07 5.48811e+06 22277 3.17729e+07 0 0.18594 0.987447 0.777796 6.38907e+07 0.00319232 1.45334e+07 1.47637e+07 1.45048e+07 161 1.44964e+07 9.17344e+06 0.00262543 1.46805e+07 50.3155 0.00438634 0.989703 0 49.9507 GTEX-12WSN-2326-SM-5DUVG 1 B1 6 pieces well trimmed; 60.63um thickness of the epidermis 8 Skin Skin - Sun Exposed (Lower leg) 0004264 290 599 BP-44437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4634 02/09/2014 TruSeq.v1 EXCLUDE 0.989642 284941 0.972141 0.99249 0.821279 22145 1 76 0.00189018 140 0 6.12623e+07 0.0276183 366059 6.17259e+07 5.64054e+06 22164 3.04685e+07 0 0.150862 0.99249 0.815111 6.12623e+07 0.00312991 1.34827e+07 8.27454e+06 1.35611e+07 147 1.35794e+07 1.11441e+07 0.00250826 1.36352e+07 50.1024 0.0059304 0.995339 0 50.145 GTEX-12WSN-2526-SM-5LZU8 1 B1 2 pieces; <10% of internal fat in 1 piece 8 Muscle Muscle - Skeletal 0011907 299 590 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.992706 220915 0.986448 0.993911 0.891194 18953 1 76 0.0020689 272 0 8.66336e+07 0.0132836 943997 8.71643e+07 4.07212e+06 18959 4.31762e+07 0 0.095254 0.993911 0.885768 8.66336e+07 0.00271682 1.88962e+07 9.74797e+06 1.90457e+07 264 1.90123e+07 1.8423e+07 0.00239247 1.90195e+07 50.0095 0.0108301 0.995117 0 50.197 GTEX-12WSN-2726-SM-5LZUK 1 B1 2 pieces, small intimal calcifications (outlined); no plaques 7.3 Blood Vessel Artery - Tibial 0007610 300 589 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.988871 181964 0.978436 0.990165 0.864349 19874 1 76 0.00231803 144 0 6.80952e+07 0.0211845 345710 6.87715e+07 3.32439e+06 19882 3.38648e+07 0 0.114087 0.990165 0.855848 6.80952e+07 0.00313308 1.47696e+07 5.40437e+06 1.48172e+07 164 1.48028e+07 1.40306e+07 0.00272502 1.48732e+07 50.1186 0.00502693 0.99146 0 50.0804 GTEX-12WSN-5001-SM-7DHMK B1 8.3 Heart Heart - Left Ventricle 0006566 176 BP-54542 RNA isolation_PAXgene Tissue miRNA 07/01/2014 LCSET-6441 01/14/2015 TruSeq.v1 RNASEQ 0.992824 343197 0.977129 0.994097 0.858453 20191 1 76 0.00320996 194 0 7.68451e+07 0.0226232 1.79536e+06 7.73013e+07 5.73304e+06 20203 3.82945e+07 0 0.118677 0.994097 0.853386 7.68451e+07 0.00477215 1.67318e+07 1.88513e+07 1.68558e+07 239 1.682e+07 1.21883e+07 0.00399006 1.68414e+07 50.0318 0.0232255 0.995371 0 50.1847 GTEX-12WSN-5004-SM-793CE B1 7.9 Lung Lung 0008952 186 BP-54541 RNA isolation_PAXgene Tissue miRNA 07/01/2014 LCSET-6379 01/14/2015 TruSeq.v1 RNASEQ 0.99369 664756 0.968428 0.994885 0.826421 23309 1 76 0.00299843 173 0 7.59814e+07 0.0311471 254058 7.6372e+07 1.1264e+07 23331 3.78494e+07 0 0.142007 0.994885 0.822194 7.59814e+07 0.00341411 1.68154e+07 1.09632e+07 1.68224e+07 180 1.69113e+07 1.48702e+07 0.00320602 1.68178e+07 49.8613 0.00332658 0.99608 0 50.0103 GTEX-12WSN-5007-SM-7MGWH B1 5.7 Prostate Prostate 0002367 232 BP-54541 RNA isolation_PAXgene Tissue miRNA 07/01/2014 LCSET-6755 04/12/2015 TruSeq.v1 RNASEQ 0.99049 371809 0.963775 0.993043 0.799062 23387 1 76 0.00267887 131 0 6.12302e+07 0.0360052 446030 6.16591e+07 4.96497e+06 23403 3.04661e+07 0 0.164714 0.993043 0.793502 6.12302e+07 0.00360634 1.34573e+07 9.00142e+06 1.35667e+07 144 1.36245e+07 1.01354e+07 0.00314141 1.35582e+07 49.8781 0.0072338 0.995596 0 50.2025 GTEX-12WSN-5013-SM-7P8P9 B1 7.7 Esophagus Esophagus - Mucosa 0006920 249 BP-57332 RNA isolation_PAXgene Tissue miRNA 10/20/2014 LCSET-6758 04/05/2015 TruSeq.v1 RNASEQ 0.991533 510517 0.976418 0.993074 0.884107 23037 1 76 0.00293744 283 0 9.93839e+07 0.0232076 540627 1.00077e+08 1.34582e+07 23050 4.95166e+07 0 0.0923106 0.993074 0.877983 9.93839e+07 0.00343702 2.20366e+07 2.08942e+07 2.23743e+07 269 2.23938e+07 2.34675e+07 0.00318685 2.21705e+07 49.7495 0.00540211 0.994615 0 50.3802 GTEX-12WSN-5016-SM-7DUGY B1 7.4 Esophagus Esophagus - Muscularis 0004648 255 BP-56933 RNA isolation_PAXgene Tissue miRNA 10/01/2014 LCSET-6442 01/24/2015 TruSeq.v1 RNASEQ 0.993451 659193 0.965758 0.994244 0.819348 22904 1 76 0.00258898 278 0 9.11205e+07 0.0339302 666658 9.1648e+07 8.13867e+06 22927 4.53974e+07 0 0.14641 0.994244 0.814632 9.11205e+07 0.00374408 1.96949e+07 1.667e+07 1.98545e+07 268 1.98653e+07 1.63947e+07 0.00316607 1.97589e+07 49.8657 0.00727411 0.995037 0 50.2018 GTEX-12WSN-5019-SM-79OM6 B1 7.1 Skin Skin - Sun Exposed (Lower leg) 0004264 292 BP-56838 RNA isolation_PAXgene Tissue miRNA 09/29/2014 LCSET-6380 01/14/2015 TruSeq.v1 RNASEQ 0.975296 383782 0.969412 0.979316 0.803268 22971 1 76 0.00503248 139 0 6.18724e+07 0.0303314 295794 6.31792e+07 1.44906e+07 22992 3.07785e+07 0 0.166144 0.979316 0.786653 6.18724e+07 0.00629219 1.35528e+07 1.05141e+07 1.35729e+07 133 1.36651e+07 1.1322e+07 0.00565975 1.37035e+07 50.0702 0.00468182 0.983335 0 50.037 GTEX-12WSN-5022-SM-7DHN6 B1 8.4 Muscle Muscle - Skeletal 0011907 297 BP-56838 RNA isolation_PAXgene Tissue miRNA 09/29/2014 LCSET-6441 01/14/2015 TruSeq.v1 EXCLUDE 0.992228 277715 0.978155 0.993539 0.86559 19509 1 76 0.00319068 209 0 8.21292e+07 0.0215796 775049 8.26632e+07 6.145e+06 19520 4.09198e+07 0 0.112565 0.993539 0.859998 8.21292e+07 0.00486863 1.76244e+07 1.19986e+07 1.78133e+07 208 1.78524e+07 1.68324e+07 0.00402855 1.7682e+07 49.7602 0.00937598 0.994851 0 50.2664 GTEX-12ZZW-0003-SM-5ANGB C1 Blood Whole Blood 0013756 976 BP-42417 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/16/2013 LCSET-4718 02/04/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-12ZZW-0003-SM-5DWRO C1 Blood Whole Blood 0013756 976 BP-42417 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/16/2013 GTEx_OM25_Dec_01 01/29/2014 Illumina OMNI SNP Array OMNI GTEX-12ZZW-0003-SM-6WSBT C1 Blood Whole Blood 0013756 976 BP-42417 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/16/2013 LCSET-6066 09/26/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-12ZZW-0005-SM-5O9BY C1 7.2 Blood Whole Blood 0013756 976 BP-42407 RNA isolation_PAXgene Blood RNA (Manual) 08/16/2013 LCSET-4910 04/01/2014 TruSeq.v1 RNASEQ 0.951354 475030 0.98152 0.953535 0.800212 16776 1 76 0.00390148 107 0 1.08626e+08 0.0170054 176605 1.13919e+08 4.62492e+06 16777 5.40179e+07 0 0.181308 0.953535 0.76303 1.08626e+08 0.00509572 2.56108e+07 1.88834e+08 2.63699e+07 150 2.64007e+07 3.12757e+07 0.00449724 2.58407e+07 49.464 0.00155026 0.955716 0 50.7302 GTEX-12ZZW-0008-SM-5YY9L C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 1091 BP-46001 RNA isolation_Trizol Manual (Cell Pellet) 11/20/2013 LCSET-5304 05/19/2014 TruSeq.v1 RNASEQ 0.993942 465957 0.975209 0.994772 0.864883 19486 1 76 0.00221539 174 0 7.80345e+07 0.0244898 206992 7.84446e+07 3.34799e+06 19496 3.88985e+07 0 0.110326 0.994772 0.860361 7.80345e+07 0.0026636 1.74883e+07 1.35713e+07 1.7504e+07 166 1.75034e+07 2.06391e+07 0.00243931 1.75625e+07 50.0843 0.0026387 0.995602 0 50.0224 GTEX-12ZZW-0011-R10a-SM-AHZMP C1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 982 ChIP-Seq GTEX-12ZZW-0011-R10b-SM-5HL9X C1, A1 6.2 Brain Brain - Frontal Cortex (BA9) 0009834 982 BP-45053 RNA isolation_PAXgene Tissue miRNA 10/25/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.990699 604525 0.963076 0.993127 0.856219 22033 1 76 0.00245703 266 0 7.77075e+07 0.0366622 7.30151e+06 7.82453e+07 6.52417e+06 22042 3.86795e+07 0 0.106857 0.993127 0.850334 7.77075e+07 0.00344262 1.6868e+07 2.39486e+07 1.71361e+07 298 1.69054e+07 7.00032e+06 0.00294862 1.72596e+07 50.5184 0.0933157 0.995556 0 50.3941 GTEX-12ZZW-0011-R3a-SM-5DUWW C1, A1 6.4 Brain Brain - Anterior cingulate cortex (BA24) 0009835 982 BP-44878 RNA isolation_PAXgene Tissue miRNA 10/22/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.986607 368149 0.968526 0.989387 0.838763 21004 1 76 0.00256572 193 0 6.83647e+07 0.0313325 7.95947e+06 6.90981e+07 5.97204e+06 21012 3.40182e+07 0 0.129763 0.989387 0.829861 6.83647e+07 0.00386904 1.50293e+07 2.75465e+07 1.48839e+07 254 1.46583e+07 3.82725e+06 0.00321555 1.54179e+07 51.2628 0.115191 0.992167 0 49.7569 GTEX-12ZZW-0011-R4a-SM-5DUX9 C1, A1 7 Brain Brain - Amygdala 0001876 982 BP-44878 RNA isolation_PAXgene Tissue miRNA 10/22/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.98808 359625 0.968424 0.991515 0.844134 20200 1 76 0.00243496 143 0 5.61436e+07 0.0313769 6.35503e+06 5.66241e+07 4.819e+06 20207 2.79032e+07 0 0.12429 0.991515 0.836971 5.61436e+07 0.00386676 1.23251e+07 2.02004e+07 1.21733e+07 173 1.19309e+07 4.51251e+06 0.00314838 1.27492e+07 51.658 0.112232 0.994951 0 49.6901 GTEX-12ZZW-0011-R5a-SM-5DUVN C1, A1 8.3 Brain Brain - Caudate (basal ganglia) 0001873 982 BP-44020 RNA isolation_PAXgene Tissue miRNA 09/27/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.989856 503934 0.958106 0.992545 0.817023 21825 1 76 0.00240416 151 0 6.048e+07 0.041693 6.04172e+06 6.09343e+07 5.14495e+06 21837 3.0089e+07 0 0.141083 0.992545 0.810931 6.048e+07 0.00358507 1.30792e+07 2.34048e+07 1.30263e+07 177 1.28538e+07 5.17619e+06 0.00299302 1.34154e+07 51.069 0.0991514 0.995233 0 49.8986 GTEX-12ZZW-0011-R6a-SM-5DUVZ C1, A1 6 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 982 BP-44020 RNA isolation_PAXgene Tissue miRNA 09/27/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.988085 343360 0.967059 0.990898 0.830974 21385 1 76 0.00255262 195 0 6.54932e+07 0.0327887 8.93681e+06 6.60948e+07 5.83572e+06 21396 3.25852e+07 0 0.136084 0.990898 0.82341 6.54932e+07 0.00376743 1.42993e+07 2.58552e+07 1.41278e+07 224 1.3974e+07 5.06015e+06 0.0031583 1.46245e+07 51.1373 0.135212 0.99371 0 49.6984 GTEX-12ZZW-0011-R7a-SM-5DUWC C1, A1 7 Brain Brain - Putamen (basal ganglia) 0001874 982 BP-44020 RNA isolation_PAXgene Tissue miRNA 09/27/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.987384 359884 0.965878 0.989898 0.836042 21448 1 76 0.00252727 197 0 6.49984e+07 0.0339497 8.37522e+06 6.56617e+07 5.76548e+06 21461 3.23508e+07 0 0.129836 0.989898 0.827597 6.49984e+07 0.00363306 1.42459e+07 2.32029e+07 1.40717e+07 226 1.38436e+07 5.25841e+06 0.00307877 1.46327e+07 51.3856 0.127551 0.992412 0 49.6923 GTEX-12ZZW-0126-SM-5DUVB 0 C1 6 pieces, focal adherent dermal fat up to ~1mm, delineated. Squamous epithelium is ~70-90 microns 6 Skin Skin - Sun Exposed (Lower leg) 0004264 1090 946 BP-44525 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4634 02/09/2014 TruSeq.v1 EXCLUDE 0.98865 209189 0.968901 0.991 0.772871 24179 1 76 0.00201596 147 0 6.78283e+07 0.0308163 335040 6.84443e+07 5.79345e+06 24208 3.37511e+07 0 0.19603 0.991 0.765914 6.78283e+07 0.00305579 1.48687e+07 6.84279e+06 1.49982e+07 149 1.50125e+07 1.22535e+07 0.00253464 1.5005e+07 49.9876 0.00489507 0.99335 0 50.2167 GTEX-12ZZW-0426-SM-5GCO9 0 C1 2 pieces, nubbin of adherent fibroadipose tissue on one section, delineated; o/w good specimens 6.7 Blood Vessel Artery - Tibial 0007610 1101 936 BP-44172 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.98426 275308 0.976096 0.989211 0.833359 22068 1 76 0.00196958 162 0 7.64763e+07 0.0235194 305106 7.73104e+07 6.07924e+06 22085 3.7915e+07 0 0.142736 0.989211 0.824368 7.64763e+07 0.00348859 1.64648e+07 6.95875e+06 1.65596e+07 173 1.66009e+07 1.60621e+07 0.00272528 1.67831e+07 50.2728 0.00394651 0.994163 0 50.1436 GTEX-12ZZW-0926-SM-5LZUD 1 C1 2 pieces, mild congestion 6.3 Lung Lung 0008952 1166 874 BP-43956 RNA Extraction from Paxgene-derived Lysate Plate Based 09/25/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.990413 190758 0.97031 0.991416 0.787831 24011 1 76 0.00268419 161 0 7.52547e+07 0.0293655 314246 7.59064e+07 3.51003e+06 24047 3.74407e+07 0 0.182479 0.991416 0.781068 7.52547e+07 0.00335666 1.6519e+07 6.37095e+06 1.66376e+07 174 1.66228e+07 1.25999e+07 0.00302008 1.66089e+07 49.9792 0.00413992 0.992418 0 50.1789 GTEX-12ZZW-0926-SM-CYKRH 1 C1 2 pieces, mild congestion 6.3 Lung Lung 0008952 1166 874 BP-43956 RNA Extraction from Paxgene-derived Lysate Plate Based 09/25/2013 RIP-Seq GTEX-12ZZW-1026-SM-5GCMM 1 C1 2 pieces, mild interstitial fibrosis/microinfarct delineated 5.9 Heart Heart - Left Ventricle 0006566 1169 871 BP-44172 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.98406 147959 0.980503 0.989513 0.843684 20937 1 76 0.00266974 177 0 6.75382e+07 0.0193822 4.07343e+06 6.8254e+07 5.65888e+06 20948 3.34781e+07 0 0.136818 0.989513 0.834837 6.75382e+07 0.00427569 1.52287e+07 1.58944e+07 1.49891e+07 205 1.4959e+07 6.39895e+06 0.00346829 1.55868e+07 51.0277 0.0596805 0.994966 0 49.6035 GTEX-12ZZW-1726-SM-5DUVD 2 C1 7 pieces squamous mucosa sloughing, <5% thickness 5.9 Esophagus Esophagus - Mucosa 0006920 1182 862 BP-44437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.983698 200663 0.97097 0.986908 0.821048 22054 1 76 0.00201236 139 0 5.95362e+07 0.0288501 719538 6.0326e+07 5.2217e+06 22072 2.95795e+07 0 0.149922 0.986908 0.810299 5.95362e+07 0.00340432 1.32712e+07 8.18849e+06 1.33541e+07 154 1.33333e+07 9.08559e+06 0.00270608 1.34828e+07 50.2787 0.0119275 0.990117 0 50.1556 GTEX-12ZZW-2326-SM-5DUW2 1 C1 2 pieces ~10% mesothelial hyperplasia 6.4 Adipose Tissue Adipose - Visceral (Omentum) 0010414 1192 855 BP-44437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.986629 251762 0.975059 0.990448 0.746838 22848 1 76 0.00216432 121 0 5.41556e+07 0.0245014 270297 5.46778e+07 4.98308e+06 22873 2.68874e+07 0 0.228222 0.990448 0.739704 5.41556e+07 0.00343802 1.19359e+07 7.19368e+06 1.2046e+07 118 1.20961e+07 9.52546e+06 0.00279871 1.20857e+07 49.9785 0.00494345 0.994267 0 50.2294 GTEX-12ZZW-2426-SM-5DUWE 1 C1 6 pieces, muscularis, adherent fat/serosa up to ~1mm rep delineated 6.2 Colon Colon - Sigmoid 0001159 1195 853 BP-44437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.98706 264435 0.976598 0.990101 0.775821 22389 1 76 0.00208495 143 0 6.34024e+07 0.0230806 306768 6.40363e+07 6.2073e+06 22407 3.15125e+07 0 0.200777 0.990101 0.768141 6.34024e+07 0.00327559 1.38531e+07 7.49647e+06 1.39822e+07 144 1.4013e+07 1.0926e+07 0.00267844 1.40051e+07 49.986 0.00479053 0.993142 0 50.2319 GTEX-12ZZW-2926-SM-5LZUP 1 C1 4 pieces, no abnormalities noted 6.2 Brain Brain - Cortex 0001870 1224 826 BP-43956 RNA Extraction from Paxgene-derived Lysate Plate Based 09/25/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.991098 346102 0.963964 0.992446 0.850415 22933 1 76 0.0027143 267 0 8.13843e+07 0.0357236 5.10715e+06 8.20038e+07 3.98901e+06 22941 4.05303e+07 0 0.11355 0.992446 0.84399 8.13843e+07 0.0034441 1.76851e+07 1.92478e+07 1.81663e+07 288 1.80638e+07 8.92199e+06 0.0030787 1.78706e+07 49.7312 0.0622795 0.993794 0 50.6711 GTEX-12ZZW-3026-SM-5LZW7 1 C1 1 piece, mainly neurohypophysis 6.3 Pituitary Pituitary 0000007 1225 826 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.990194 262136 0.954395 0.991597 0.746991 24709 1 76 0.00264219 132 0 6.71849e+07 0.0453999 490542 6.77542e+07 3.44454e+06 24739 3.34402e+07 0 0.207405 0.991597 0.740713 6.71849e+07 0.00341272 1.44928e+07 1.11092e+07 1.46538e+07 147 1.46694e+07 9.9042e+06 0.00302691 1.45723e+07 49.8341 0.00724002 0.992999 0 50.2761 GTEX-12ZZX-0001-SM-5ANG4 C1 Blood Whole Blood 0013756 494 BP-42481 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/20/2013 LCSET-4718 02/04/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-12ZZX-0001-SM-5DWRR C1 Blood Whole Blood 0013756 494 BP-42481 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/20/2013 GTEx_OM25_Dec_01 01/28/2014 Illumina OMNI SNP Array OMNI GTEX-12ZZX-0001-SM-6WSBV C1 Blood Whole Blood 0013756 494 BP-42481 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/20/2013 LCSET-6066 09/27/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-12ZZX-0005-SM-5O9A9 C1 7.5 Blood Whole Blood 0013756 494 BP-42484 RNA isolation_PAXgene Blood RNA (Manual) 08/20/2013 LCSET-4909 03/20/2014 TruSeq.v1 RNASEQ 0.972656 487674 0.975176 0.977618 0.778459 20325 1 76 0.00246613 126 0 8.80551e+07 0.0236318 314903 9.00711e+07 1.38799e+07 20341 4.36354e+07 0 0.196717 0.977618 0.761035 8.80551e+07 0.00469229 2.00954e+07 9.72147e+07 2.01442e+07 150 2.02175e+07 1.95282e+07 0.00357356 2.04815e+07 50.3244 0.00349616 0.98258 0 50.0607 GTEX-12ZZX-0008-SM-5YY9N C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 586 BP-46001 RNA isolation_Trizol Manual (Cell Pellet) 11/20/2013 LCSET-5304 05/19/2014 TruSeq.v1 RNASEQ 0.993289 548993 0.973222 0.994195 0.836201 21761 1 76 0.00228923 290 0 1.05113e+08 0.026441 474335 1.05727e+08 4.85692e+06 21786 5.23905e+07 0 0.137021 0.994195 0.831347 1.05113e+08 0.00268113 2.34268e+07 1.80795e+07 2.35358e+07 270 2.35185e+07 2.64376e+07 0.002485 2.35491e+07 50.0325 0.00448641 0.9951 0 50.1161 GTEX-12ZZX-0011-R10a-SM-AHZMR C1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 497 ChIP-Seq GTEX-12ZZX-0011-R10b-SM-5DUWK C1, A1 8.7 Brain Brain - Frontal Cortex (BA9) 0009834 497 BP-43982 RNA isolation_PAXgene Tissue miRNA 09/26/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.989498 588013 0.959991 0.992305 0.831324 23503 1 76 0.00196424 199 0 7.71132e+07 0.0393467 2.18735e+06 7.77111e+07 7.4627e+06 23520 3.83505e+07 0 0.128668 0.992305 0.824927 7.71132e+07 0.00295892 1.68742e+07 1.41055e+07 1.6826e+07 243 1.6877e+07 1.14696e+07 0.00246018 1.70281e+07 50.2229 0.0281472 0.995111 0 49.9284 GTEX-12ZZX-0011-R11a-SM-5DUVJ C1, A1 8.8 Brain Brain - Cerebellar Hemisphere 0002037 497 BP-43982 RNA isolation_PAXgene Tissue miRNA 09/26/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.987513 535538 0.947604 0.990759 0.737631 23241 1 76 0.00216004 156 0 7.26392e+07 0.0517699 967531 7.33167e+07 7.17916e+06 23269 3.60897e+07 0 0.209973 0.990759 0.730815 7.26392e+07 0.0032894 1.56735e+07 1.15748e+07 1.57312e+07 168 1.58133e+07 1.02252e+07 0.00272287 1.58147e+07 50.0022 0.0131966 0.994005 0 50.0919 GTEX-12ZZX-0011-R1a-SM-5EQ6B C1, A1 8.5 Brain Brain - Hippocampus 0001954 497 BP-44878 RNA isolation_PAXgene Tissue miRNA 10/22/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.990978 893304 0.958424 0.993713 0.859224 23174 1 76 0.00201802 274 0 7.91262e+07 0.0411912 3.80410e+06 7.96268e+07 9.88793e+06 23192 3.93454e+07 0 0.0991997 0.993713 0.853822 7.91262e+07 0.00309272 1.73254e+07 2.03003e+07 1.74044e+07 267 1.73049e+07 1.06266e+07 0.00255389 1.76475e+07 50.4901 0.0477742 0.996448 0 50.1136 GTEX-12ZZX-0011-R2a-SM-5EGLG C1, A1 7.9 Brain Brain - Substantia nigra 0002038 497 BP-44878 RNA isolation_PAXgene Tissue miRNA 10/22/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.990844 545731 0.96663 0.993442 0.869856 21961 1 76 0.00198028 208 0 6.96474e+07 0.0330033 4.26623e+06 7.01072e+07 6.06259e+06 21972 3.46506e+07 0 0.0967733 0.993442 0.864152 6.96474e+07 0.00306226 1.53747e+07 1.70214e+07 1.54476e+07 221 1.53274e+07 9.67977e+06 0.00251985 1.56697e+07 50.5522 0.060853 0.996041 0 50.1182 GTEX-12ZZX-0011-R3b-SM-5EGLH C1, A1 8.4 Brain Brain - Anterior cingulate cortex (BA24) 0009835 497 BP-44878 RNA isolation_PAXgene Tissue miRNA 10/22/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.990015 707435 0.96007 0.992905 0.835523 23530 1 76 0.00203773 270 0 8.33761e+07 0.0395325 4.65121e+06 8.39719e+07 7.81264e+06 23545 4.14677e+07 0 0.124547 0.992905 0.829595 8.33761e+07 0.00309593 1.81781e+07 2.37824e+07 1.82637e+07 288 1.81698e+07 9.649e+06 0.00256529 1.84988e+07 50.4486 0.05539 0.995794 0 50.1175 GTEX-12ZZX-0011-R5a-SM-5HL89 C1, A1 7.4 Brain Brain - Caudate (basal ganglia) 0001873 497 BP-45053 RNA isolation_PAXgene Tissue miRNA 10/25/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.990498 441199 0.967875 0.993509 0.841942 22862 1 76 0.00239768 267 0 8.40591e+07 0.0318962 6.41268e+06 8.46083e+07 8.02274e+06 22876 4.18253e+07 0 0.125933 0.993509 0.836477 8.40591e+07 0.00328289 1.82176e+07 2.6365e+07 1.86018e+07 294 1.84394e+07 7.21277e+06 0.00283894 1.86049e+07 50.2234 0.0757926 0.996521 0 50.5218 GTEX-12ZZX-0011-R6a-SM-5HL8L C1, A1 8.4 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 497 BP-45053 RNA isolation_PAXgene Tissue miRNA 10/25/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.990285 638564 0.955415 0.993017 0.837544 23228 1 76 0.00222112 199 0 7.11489e+07 0.0442798 3.36772e+06 7.16493e+07 6.60694e+06 23245 3.53965e+07 0 0.117871 0.993017 0.831695 7.11489e+07 0.00318789 1.54932e+07 1.60982e+07 1.55396e+07 241 1.55044e+07 8.35413e+06 0.00270317 1.57108e+07 50.3307 0.0470029 0.995749 0 50.0748 GTEX-12ZZX-0011-R7b-SM-5DUVV C1, A1 8.4 Brain Brain - Putamen (basal ganglia) 0001874 497 BP-43982 RNA isolation_PAXgene Tissue miRNA 09/26/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.988746 559842 0.96161 0.991293 0.82141 22508 1 76 0.00222235 200 0 7.26087e+07 0.0380914 5.94331e+06 7.32464e+07 6.75137e+06 22518 3.61354e+07 0 0.1402 0.991293 0.814258 7.26087e+07 0.00327085 1.58956e+07 3.02566e+07 1.55885e+07 252 1.54982e+07 7.23914e+06 0.00274525 1.61696e+07 51.06 0.0811413 0.993841 0 49.5124 GTEX-12ZZX-0011-R8a-SM-5DUW8 C1, A1 8.1 Brain Brain - Hypothalamus 0001898 497 BP-43982 RNA isolation_PAXgene Tissue miRNA 09/26/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.988285 506820 0.956825 0.990842 0.822818 23569 1 76 0.00208046 156 0 6.36019e+07 0.042793 2.70085e+06 6.41898e+07 5.83059e+06 23588 3.16486e+07 0 0.134006 0.990842 0.815283 6.36019e+07 0.00314609 1.3953e+07 1.46184e+07 1.39433e+07 181 1.38971e+07 7.79365e+06 0.0026119 1.41583e+07 50.4655 0.0420761 0.993399 0 49.9826 GTEX-12ZZX-0126-SM-5EGK9 0 C1 6 pieces, squamous epithelium is ~60 microns; minimal dermal fat 7.9 Skin Skin - Sun Exposed (Lower leg) 0004264 584 718 BP-44901 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.989639 196243 0.976419 0.99259 0.834345 22627 1 76 0.00190115 201 0 6.39459e+07 0.0233023 403083 6.44233e+07 5.90291e+06 22645 3.18052e+07 0 0.142074 0.99259 0.828163 6.39459e+07 0.00303854 1.38378e+07 7.17354e+06 1.3928e+07 156 1.39669e+07 1.23239e+07 0.00246815 1.39752e+07 50.0149 0.00625679 0.995541 0 50.1624 GTEX-12ZZX-0226-SM-5DUXU 0 C1 2 pieces, ~10% fascial/vasuclar tissue; rep delineated 6.8 Adipose Tissue Adipose - Subcutaneous 0002190 587 716 BP-44437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.987405 246366 0.97599 0.989778 0.799507 22846 1 76 0.00199375 142 0 6.93759e+07 0.0236962 398393 7.00924e+07 6.17778e+06 22868 3.45196e+07 0 0.176483 0.989778 0.791334 6.93759e+07 0.00312075 1.52569e+07 6.2808e+06 1.5385e+07 162 1.53981e+07 1.21131e+07 0.0025559 1.54017e+07 50.0059 0.00568382 0.99215 0 50.209 GTEX-12ZZX-0326-SM-5DUVH 0 C1 2 pieces, minimal interstitial fat 7.7 Muscle Muscle - Skeletal 0011907 621 682 BP-44437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.990536 220444 0.983312 0.993393 0.877047 20136 1 76 0.00168901 127 0 6.81177e+07 0.0164065 600340 6.85708e+07 6.15958e+06 20145 3.38934e+07 0 0.106265 0.993393 0.871252 6.81177e+07 0.002825 1.46821e+07 7.27511e+06 1.46513e+07 153 1.46666e+07 1.54885e+07 0.00225538 1.48413e+07 50.2959 0.00875504 0.996249 0 49.9475 GTEX-12ZZX-0426-SM-5DUVT 0 C1 2 pieces incomplete rim of adherent fat ~0.5-1mm, delineated 7.1 Nerve Nerve - Tibial 0001323 627 677 BP-44437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.988133 192719 0.967045 0.991781 0.763901 23606 1 76 0.00198802 137 0 6.11717e+07 0.0326552 255025 6.16786e+07 6.04198e+06 23629 3.03997e+07 0 0.203144 0.991781 0.757623 6.11717e+07 0.00308628 1.33611e+07 5.80305e+06 1.34646e+07 137 1.35164e+07 1.02085e+07 0.00253513 1.35201e+07 50.0067 0.00413474 0.99543 0 50.1929 GTEX-12ZZX-0526-SM-5DUW6 0 C1 2 pieces, no fat or atherosis; good specimens 8.7 Blood Vessel Artery - Tibial 0007610 628 676 BP-44437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.987958 246039 0.976323 0.991543 0.84734 20912 1 76 0.00181693 143 0 6.29958e+07 0.0232024 402321 6.3533e+07 6.32496e+06 20925 3.13019e+07 0 0.128983 0.991543 0.840174 6.29958e+07 0.00295796 1.34467e+07 4.85795e+06 1.35687e+07 147 1.36023e+07 1.30301e+07 0.00238538 1.36261e+07 50.0438 0.00633247 0.995129 0 50.2259 GTEX-12ZZX-0626-SM-5EQ46 1 C1 2 pieces, no atherosis; adherent fat up to ~1mm, delineated 6.2 Blood Vessel Artery - Coronary 0001621 638 667 BP-44901 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.989969 291433 0.980244 0.992706 0.782038 22395 1 76 0.00204116 162 0 7.54578e+07 0.0193576 500142 7.60122e+07 8.71726e+06 22418 3.74973e+07 0 0.198206 0.992706 0.776334 7.54578e+07 0.00326073 1.65421e+07 7.33721e+06 1.6755e+07 174 1.67526e+07 1.29173e+07 0.00264926 1.67482e+07 49.9933 0.00657976 0.995443 0 50.3197 GTEX-12ZZX-0726-SM-5EGKA 1 C1 2 pieces, adherent/interstitial fat is ~40% of specimens 7.1 Heart Heart - Atrial Appendage 0006631 640 666 BP-44901 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.990833 227590 0.978473 0.993392 0.807142 21757 1 76 0.00193561 149 0 6.96701e+07 0.021227 1.80109e+06 7.01335e+07 6.12343e+06 21772 3.46602e+07 0 0.171331 0.993392 0.801808 6.96701e+07 0.00306537 1.52846e+07 9.39915e+06 1.52392e+07 172 1.52586e+07 1.06753e+07 0.00249903 1.54189e+07 50.2612 0.0256809 0.995951 0 49.9257 GTEX-12ZZX-1026-SM-5LZUW 1 C1 6 pieces, mild atherosis 6.8 Blood Vessel Artery - Aorta 0001496 647 661 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.989868 448231 0.961932 0.991266 0.787654 21425 1 76 0.00260464 132 0 6.15322e+07 0.0376135 195435 6.20744e+07 3.10139e+06 21438 3.05794e+07 0 0.174278 0.991266 0.780774 6.15322e+07 0.003428 1.31666e+07 1.30423e+07 1.32451e+07 138 1.32594e+07 1.1108e+07 0.00301574 1.32458e+07 49.9744 0.0031484 0.992665 0 50.1485 GTEX-12ZZX-1126-SM-5EGKB 1 C1 2 pieces, well-defined TDLUs, rep delineated 7.5 Breast Breast - Mammary Tissue 0008367 651 657 BP-44901 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.989714 223889 0.967868 0.992119 0.739417 24540 1 76 0.00214878 142 0 6.80004e+07 0.0314179 455016 6.85405e+07 6.17965e+06 24571 3.38073e+07 0 0.228451 0.992119 0.73359 6.80004e+07 0.00312164 1.49451e+07 7.28702e+06 1.50488e+07 146 1.50669e+07 1.12168e+07 0.00263403 1.50819e+07 50.0248 0.00663864 0.994525 0 50.1728 GTEX-12ZZX-1226-SM-5EGHS 1 C1 2 pieces, lymphoid aggregates (delineated) and regressive changes suggest Hashimoto/autoimmune thyroiditis. Possible poorly preserved parathyroid ensquared 6.5 Thyroid Thyroid 0002046 656 653 BP-44901 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.979201 200016 0.967654 0.984043 0.76276 23976 1 76 0.00300896 116 0 5.84093e+07 0.0306703 411976 5.93565e+07 8.64294e+06 23996 2.89346e+07 0 0.204894 0.984043 0.750588 5.84093e+07 0.00625908 1.28366e+07 9.33078e+06 1.29166e+07 126 1.3016e+07 8.85912e+06 0.00462603 1.30071e+07 49.9828 0.00694071 0.988885 0 50.1553 GTEX-12ZZX-1326-SM-5DUWI 1 C1 6 pieces, squamous mucosa up to ~0.3mm thick 9.4 Esophagus Esophagus - Mucosa 0006920 662 648 BP-44437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.990467 249884 0.980351 0.992794 0.775656 21491 1 76 0.00200491 133 0 7.00046e+07 0.0193644 473783 7.05127e+07 6.25114e+06 21511 3.48461e+07 0 0.204695 0.992794 0.770066 7.00046e+07 0.00308772 1.58082e+07 9.03999e+06 1.59226e+07 153 1.59727e+07 1.30435e+07 0.00254505 1.59158e+07 49.9108 0.00671912 0.995121 0 50.1802 GTEX-12ZZX-1726-SM-5BC63 1 C1 2 pieces, minimal vascular tissue/mesothelial hyperplasia 6.7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 670 643 BP-43916 RNA Extraction from Paxgene-derived Lysate Plate Based 09/24/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.985383 297224 0.972398 0.989666 0.801312 22495 1 76 0.00281761 131 0 6.0791e+07 0.0272694 1.0679e+06 6.14258e+07 1.65426e+07 22518 3.01555e+07 0 0.171085 0.989666 0.793031 6.0791e+07 0.00533276 1.32386e+07 1.0086e+07 1.34231e+07 146 1.34664e+07 9.89355e+06 0.00406974 1.34501e+07 49.9697 0.0173851 0.993948 0 50.3462 GTEX-12ZZX-1926-SM-5EGKC 1 C1 6 pieces, squamous mucosa up to ~0.2mm 5.8 Vagina Vagina 0000996 677 637 BP-44901 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.989155 239915 0.970836 0.99165 0.752536 23661 1 76 0.00202241 167 0 7.79707e+07 0.0288394 438666 7.86272e+07 6.4794e+06 23701 3.87587e+07 0 0.2183 0.99165 0.746253 7.79707e+07 0.00317386 1.70602e+07 7.3487e+06 1.72124e+07 175 1.72065e+07 1.27948e+07 0.00259669 1.72558e+07 50.0716 0.00557906 0.994146 0 50.2221 GTEX-12ZZX-2026-SM-5LZV9 1 C1 2 pieces, no abnormalities 6 Ovary Ovary 0000992 679 637 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.990634 175715 0.966426 0.991805 0.738839 23054 1 76 0.00255557 144 0 7.07069e+07 0.0333331 236409 7.12912e+07 3.56908e+06 23090 3.5191e+07 0 0.227587 0.991805 0.732784 7.07069e+07 0.00323031 1.54781e+07 8.17186e+06 1.55539e+07 148 1.55612e+07 1.26546e+07 0.00289254 1.55569e+07 49.9931 0.0033161 0.992975 0 50.122 GTEX-12ZZX-2126-SM-5LZVL 1 C1 2 pieces, myometrium only, no endometrium noted 6.4 Uterus Uterus 0000995 683 634 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.989113 202406 0.965884 0.990231 0.763874 22716 1 76 0.00277393 133 0 6.51685e+07 0.033845 179647 6.58114e+07 3.58896e+06 22741 3.2381e+07 0 0.20201 0.990231 0.756412 6.51685e+07 0.00355099 1.42284e+07 5.55785e+06 1.42746e+07 147 1.42782e+07 1.04558e+07 0.00316202 1.43017e+07 50.0411 0.00272972 0.991349 0 50.0809 GTEX-12ZZX-2426-SM-5GCOE 0 C1 6 pieces, squamous epithelium is ~50-70 microns 8.2 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 691 627 BP-44172 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.985725 166907 0.976991 0.990079 0.817196 21941 1 76 0.00221264 151 0 5.60685e+07 0.0227469 334420 5.66303e+07 4.69324e+06 21960 2.78488e+07 0 0.159795 0.990079 0.809088 5.60685e+07 0.00342212 1.22468e+07 6.57681e+06 1.2271e+07 133 1.2342e+07 1.01465e+07 0.00281472 1.24068e+07 50.131 0.00590531 0.994432 0 50.0493 GTEX-12ZZX-2726-SM-5N9FT 1 C1 6 pieces, all muscularis 5.7 Colon Colon - Sigmoid 0001159 702 619 BP-44172 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.987293 319095 0.966752 0.988566 0.817539 24019 1 76 0.00409082 275 0 1.09247e+08 0.0330496 3.02843e+06 1.1051e+08 5.84522e+06 24044 5.4275e+07 0 0.149213 0.988566 0.808191 1.09247e+08 0.00420033 2.33575e+07 1.13456e+07 2.36166e+07 330 2.34957e+07 1.4761e+07 0.00414551 2.36126e+07 50.1241 0.027404 0.989839 0 50.2758 GTEX-12ZZX-2826-SM-5BC6K 1 C1 4 pieces, no abnormalities 7.3 Brain Brain - Cerebellum 0002037 709 612 BP-43916 RNA Extraction from Paxgene-derived Lysate Plate Based 09/24/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.98785 431644 0.946998 0.991256 0.699866 23966 1 76 0.00300512 157 0 8.11086e+07 0.052625 1.16213e+06 8.18241e+07 2.10654e+07 23999 4.02896e+07 0 0.247132 0.991256 0.693746 8.11086e+07 0.0050176 1.74359e+07 1.16546e+07 1.76479e+07 177 1.77223e+07 9.46567e+06 0.0040079 1.76159e+07 49.8494 0.0142028 0.994663 0 50.3021 GTEX-12ZZX-2926-SM-5GCOQ 1 C1 4 pieces, no abnormalities 6.8 Brain Brain - Cortex 0001870 712 610 BP-44172 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.985258 317346 0.961279 0.990235 0.829524 23143 1 76 0.00223067 153 0 6.82504e+07 0.0382752 2.32328e+06 6.89234e+07 6.32852e+06 23156 3.38731e+07 0 0.131755 0.990235 0.821424 6.82504e+07 0.00347772 1.49047e+07 1.33994e+07 1.49817e+07 200 1.50539e+07 8.99748e+06 0.00285106 1.51417e+07 50.1453 0.0337081 0.995213 0 50.1289 GTEX-12ZZX-2926-SM-CYKV2 1 C1 4 pieces, no abnormalities 6.8 Brain Brain - Cortex 0001870 712 610 BP-44172 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 RIP-Seq GTEX-12ZZX-3026-SM-5GCP3 1 C1 1 piece, prominent adenohypophysis, 4mm neurohypophysis (delineated) 7.5 Pituitary Pituitary 0000007 713 610 BP-44172 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.985292 208560 0.97086 0.98993 0.805059 24275 1 76 0.00219671 138 0 6.13363e+07 0.0287831 711301 6.19602e+07 5.39479e+06 24301 3.04507e+07 0 0.165801 0.98993 0.796952 6.13363e+07 0.00335624 1.35866e+07 7.62042e+06 1.36528e+07 148 1.37407e+07 1.00936e+07 0.00277376 1.37700e+07 50.0533 0.01148 0.994569 0 50.1214 GTEX-12ZZY-0004-SM-5ANFV C1 Blood Whole Blood 0013756 355 BP-42481 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/20/2013 LCSET-4718 02/04/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-12ZZY-0004-SM-5DWRV C1 Blood Whole Blood 0013756 355 BP-42481 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/20/2013 GTEx_OM25_Dec_01 01/28/2014 Illumina OMNI SNP Array OMNI GTEX-12ZZY-0004-SM-6WSCC C1 Blood Whole Blood 0013756 355 BP-42481 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/20/2013 LCSET-6066 09/27/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-12ZZY-0008-SM-5YY9Q C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 511 BP-46001 RNA isolation_Trizol Manual (Cell Pellet) 11/20/2013 LCSET-5304 05/19/2014 TruSeq.v1 RNASEQ 0.993281 522304 0.974528 0.994299 0.861956 20238 1 76 0.00219754 222 0 9.15945e+07 0.025168 183315 9.21196e+07 4.00852e+06 20252 4.56539e+07 0 0.112571 0.994299 0.857042 9.15945e+07 0.00271045 2.04904e+07 1.66838e+07 2.06175e+07 219 2.06327e+07 2.43827e+07 0.00245373 2.05776e+07 49.9331 0.00198997 0.995318 0 50.1546 GTEX-12ZZY-0011-R10b-SM-5HL7W C1, A1 6.7 Brain Brain - Frontal Cortex (BA9) 0009834 388 BP-45053 RNA isolation_PAXgene Tissue miRNA 10/25/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.98976 1.03827e+06 0.954345 0.993258 0.87371 22434 1 76 0.00175977 270 0 8.08593e+07 0.0451724 2.85679e+06 8.14082e+07 7.16495e+06 22442 4.01971e+07 0 0.0806346 0.993258 0.86782 8.08593e+07 0.00288038 1.75021e+07 2.54828e+07 1.76543e+07 298 1.76648e+07 1.14326e+07 0.0023181 1.77605e+07 50.1351 0.0350921 0.996756 0 50.2165 GTEX-12ZZY-0011-R5a-SM-5EGL9 C1, A1 7 Brain Brain - Caudate (basal ganglia) 0001873 388 BP-44878 RNA isolation_PAXgene Tissue miRNA 10/22/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.988804 669132 0.961815 0.9921 0.828929 23862 1 76 0.00172846 268 0 8.38212e+07 0.0377588 3.75128e+06 8.44887e+07 7.84067e+06 23876 4.16694e+07 0 0.132886 0.9921 0.822381 8.38212e+07 0.00278343 1.82403e+07 2.41339e+07 1.83565e+07 278 1.83607e+07 1.04299e+07 0.0022542 1.84915e+07 50.1775 0.0443998 0.995396 0 50.1588 GTEX-12ZZY-0011-R6b-SM-5EGLA C1, A1 7.8 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 388 BP-44878 RNA isolation_PAXgene Tissue miRNA 10/22/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.989328 677933 0.958152 0.99227 0.812276 24264 1 76 0.00179614 269 0 8.57336e+07 0.0414098 3.95307e+06 8.64015e+07 7.88267e+06 24284 4.26334e+07 0 0.145876 0.99227 0.805997 8.57336e+07 0.00281883 1.87242e+07 2.38244e+07 1.85565e+07 273 1.8628e+07 1.07941e+07 0.00230597 1.88856e+07 50.3433 0.0457524 0.995213 0 49.7751 GTEX-12ZZY-0011-R7a-SM-5EGLB C1, A1 7.8 Brain Brain - Putamen (basal ganglia) 0001874 388 BP-44878 RNA isolation_PAXgene Tissue miRNA 10/22/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.989311 633958 0.959327 0.992576 0.8238 23278 1 76 0.00172712 199 0 7.36795e+07 0.0402888 3.39848e+06 7.42306e+07 6.36264e+06 23300 3.66216e+07 0 0.135527 0.992576 0.817684 7.36795e+07 0.00286944 1.61089e+07 2.05874e+07 1.60283e+07 249 1.60385e+07 8.77591e+06 0.0022964 1.63271e+07 50.4459 0.0457827 0.995841 0 49.8747 GTEX-12ZZY-0126-SM-5LZV2 2 C1 2 pieces, spermatogenesis appears reduced 7.1 Testis Testis 0000473 494 841 BP-43956 RNA Extraction from Paxgene-derived Lysate Plate Based 09/25/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.991124 240898 0.925577 0.992177 0.725243 33100 1 76 0.00244464 153 0 7.62754e+07 0.0740571 484000 7.68769e+07 3.77475e+06 33154 3.79903e+07 0 0.200334 0.992177 0.719569 7.62754e+07 0.00304073 1.57317e+07 9.86262e+06 1.58132e+07 151 1.58457e+07 1.30218e+07 0.00274237 1.57734e+07 49.8857 0.00629578 0.993229 0 50.1291 GTEX-12ZZY-0226-SM-5LZVE 0 C1 6 pieces, minimal dermal fat; squamous epithelium is 30-50 microns 8.7 Skin Skin - Sun Exposed (Lower leg) 0004264 510 826 BP-43956 RNA Extraction from Paxgene-derived Lysate Plate Based 09/25/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.992294 241158 0.973267 0.993434 0.825043 23871 1 76 0.00236794 215 0 8.10728e+07 0.0264166 304980 8.16086e+07 3.90568e+06 23893 4.03688e+07 0 0.148225 0.993434 0.819626 8.10728e+07 0.00305484 1.75558e+07 8.46009e+06 1.76643e+07 197 1.76797e+07 1.56748e+07 0.00271099 1.76308e+07 49.9308 0.00373711 0.994574 0 50.154 GTEX-12ZZY-0326-SM-5LZVQ 0 C1 2 pieces,j ~10% fibrofascial tissue, delineated 6.6 Adipose Tissue Adipose - Subcutaneous 0002190 513 824 BP-43956 RNA Extraction from Paxgene-derived Lysate Plate Based 09/25/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.990869 227428 0.975196 0.992323 0.798314 23282 1 76 0.00239825 171 0 7.7694e+07 0.0245098 404176 7.82951e+07 3.9636e+06 23310 3.86812e+07 0 0.176882 0.992323 0.792186 7.7694e+07 0.00306457 1.71038e+07 7.14914e+06 1.72899e+07 190 1.72962e+07 1.31658e+07 0.00273092 1.72047e+07 49.8674 0.00516221 0.993777 0 50.2705 GTEX-12ZZY-0426-SM-5LZW3 0 C1 2 pieces, clean specimens, focal adherent nubbin of fat ~0.5mm delineated 6.7 Nerve Nerve - Tibial 0001323 524 814 BP-43956 RNA Extraction from Paxgene-derived Lysate Plate Based 09/25/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.990312 200308 0.969134 0.991639 0.752344 24068 1 76 0.00252774 162 0 7.4615e+07 0.0305501 294064 7.52441e+07 3.65348e+06 24102 3.71309e+07 0 0.21679 0.991639 0.746053 7.4615e+07 0.00322095 1.63968e+07 6.55899e+06 1.64955e+07 165 1.65051e+07 1.18179e+07 0.00287388 1.64812e+07 49.9637 0.00390813 0.992965 0 50.15 GTEX-12ZZY-0526-SM-5EQ5H 0 C1 2 pieces, rep foci of Monckeberg's medial sclerosis delineated; minimal atherosis. 7 Blood Vessel Artery - Tibial 0007610 526 814 BP-44901 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.991559 211134 0.976046 0.993784 0.830393 21552 1 76 0.00190376 143 0 6.44739e+07 0.0235365 204230 6.48771e+07 7.66177e+06 21567 3.20856e+07 0 0.145652 0.993784 0.825231 6.44739e+07 0.00298626 1.39734e+07 4.95484e+06 1.41211e+07 149 1.41267e+07 1.27097e+07 0.0024438 1.41056e+07 49.9625 0.00314795 0.996008 0 50.2629 GTEX-12ZZY-0626-SM-5EQ5T 0 C1 2 pieces, only trace interstitial fat 8.4 Muscle Muscle - Skeletal 0011907 539 801 BP-44901 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.989815 240136 0.983142 0.993191 0.87304 19048 1 76 0.00163633 123 0 6.29071e+07 0.0166249 634450 6.33384e+07 8.57331e+06 19056 3.12868e+07 0 0.110103 0.993191 0.867095 6.29071e+07 0.00268196 1.35822e+07 6.44489e+06 1.3629e+07 142 1.36688e+07 1.40766e+07 0.00215737 1.37413e+07 50.1324 0.0100168 0.996567 0 50.0862 GTEX-12ZZY-0726-SM-5EQ66 0 C1 6 pieces, minimal dermal fat; squamous epithelium is ~50-80 microns 7.9 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 542 799 BP-44901 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.990247 298731 0.972985 0.992828 0.770165 22673 1 76 0.00203703 154 0 6.01522e+07 0.0267688 373939 6.05868e+07 7.56481e+06 22690 2.99234e+07 0 0.20282 0.992828 0.764642 6.01522e+07 0.00294797 1.31462e+07 8.0004e+06 1.32199e+07 140 1.32465e+07 9.89413e+06 0.00249131 1.32693e+07 50.043 0.00617196 0.99541 0 50.1398 GTEX-12ZZY-0826-SM-5EQMT 1 C1 2 piecesm features of goiter; prominent regressive changes/scarring 6 Thyroid Thyroid 0002046 553 789 BP-44901 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.988266 309515 0.967117 0.991428 0.729671 24342 1 76 0.00217754 133 0 6.63998e+07 0.0324789 269311 6.69739e+07 8.798e+06 24377 3.29976e+07 0 0.237446 0.991428 0.723416 6.63998e+07 0.00339298 1.45362e+07 6.70805e+06 1.46042e+07 144 1.46433e+07 1.03633e+07 0.00278332 1.46962e+07 50.0902 0.00402113 0.99459 0 50.1167 GTEX-12ZZY-0926-SM-5EQ6I 1 C1 2 pieces, minimal-mild congestion 6.8 Lung Lung 0008952 555 790 BP-44901 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.987126 415776 0.966273 0.99084 0.731637 24834 1 76 0.00234515 137 0 6.98156e+07 0.0333367 179853 7.04611e+07 8.85814e+06 24868 3.46523e+07 0 0.234636 0.99084 0.724935 6.98156e+07 0.00351793 1.52868e+07 8.07202e+06 1.54308e+07 152 1.54863e+07 1.04609e+07 0.00292935 1.54792e+07 49.9885 0.00255252 0.994553 0 50.2345 GTEX-12ZZY-1126-SM-5DUWQ 1 C1 2 pieces, minimal interstitial fibrosis 6.2 Heart Heart - Left Ventricle 0006566 563 783 BP-44437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.9843 202681 0.983024 0.987837 0.834812 19593 1 76 0.00159786 263 0 7.03984e+07 0.016906 5.31978e+06 7.12653e+07 6.87796e+06 19598 3.50128e+07 0 0.148212 0.987837 0.824658 7.03984e+07 0.00281296 1.55795e+07 3.39385e+07 1.52708e+07 280 1.51802e+07 4.67073e+06 0.00220324 1.58879e+07 51.139 0.0746476 0.991373 0 49.4997 GTEX-12ZZY-1226-SM-5GCNK 1 C1 2 pieces, no abnormalities 6.5 Heart Heart - Atrial Appendage 0006631 565 782 BP-44172 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.984844 243916 0.979126 0.990112 0.823592 22487 1 76 0.00189702 198 0 7.73566e+07 0.0206576 2.89726e+06 7.81292e+07 7.14633e+06 22503 3.83879e+07 0 0.155533 0.990112 0.815449 7.73566e+07 0.00315768 1.67515e+07 1.39021e+07 1.6572e+07 244 1.66637e+07 1.13106e+07 0.00252399 1.70163e+07 50.5235 0.0370829 0.99538 0 49.7306 GTEX-12ZZY-1326-SM-5GCNW 1 C1 6 pieces, atherosis of up to ~0.5mm 7.3 Blood Vessel Artery - Aorta 0001496 566 782 BP-44172 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.980765 226013 0.975106 0.985371 0.812565 22690 1 76 0.00218119 171 0 8.14714e+07 0.0244904 194519 8.2681e+07 6.65765e+06 22707 4.03835e+07 0 0.162541 0.985371 0.800678 8.14714e+07 0.00363729 1.7468e+07 7.19172e+06 1.75932e+07 188 1.76154e+07 1.53317e+07 0.00290584 1.78063e+07 50.2695 0.00235265 0.989976 0 50.1785 GTEX-12ZZY-1426-SM-5N9EI 1 C1 6 pieces, squamous mucosa up to ~0.4mm, ~20% thickness. Submucosa mucus glands noted, rep delineated 5.7 Esophagus Esophagus - Mucosa 0006920 568 781 BP-44172 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.989327 331613 0.974106 0.99051 0.827218 23197 1 76 0.00384767 371 0 1.11754e+08 0.0255985 1.29598e+06 1.12824e+08 5.41514e+06 23219 5.55517e+07 0 0.146888 0.99051 0.819368 1.11754e+08 0.00400879 2.49795e+07 1.39457e+07 2.51434e+07 343 2.50511e+07 1.63087e+07 0.00392813 2.52067e+07 50.1548 0.0114867 0.991693 0 50.1635 GTEX-12ZZY-1526-SM-5LZWF 1 C1 6 pieces, all muscularis, good specimens 5.8 Esophagus Esophagus - Muscularis 0004648 569 781 BP-43956 RNA Extraction from Paxgene-derived Lysate Plate Based 09/25/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.990807 250410 0.970633 0.991868 0.802826 23039 1 76 0.00239506 202 0 7.81838e+07 0.0291841 2.10416e+06 7.88248e+07 3.76482e+06 23064 3.88859e+07 0 0.167806 0.991868 0.796298 7.81838e+07 0.00317065 1.7023e+07 8.16577e+06 1.72194e+07 224 1.71408e+07 9.67439e+06 0.00278244 1.71796e+07 50.0564 0.0266942 0.99293 0 50.2869 GTEX-12ZZY-2726-SM-5EQ45 1 C1 6 pieces, all muscularis, trace adherent fat 5.7 Colon Colon - Sigmoid 0001159 605 756 BP-44901 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.990119 246089 0.968795 0.992718 0.823209 23556 1 76 0.0019375 207 0 7.96739e+07 0.0309629 1.41751e+06 8.02584e+07 1.04133e+07 23577 3.96167e+07 0 0.145586 0.992718 0.817215 7.96739e+07 0.00305878 1.70175e+07 8.85276e+06 1.72106e+07 221 1.71627e+07 1.24998e+07 0.00249667 1.72659e+07 50.1498 0.0176619 0.995317 0 50.282 GTEX-12ZZY-2926-SM-5DUXO 1 C1 4 pieces (fragmented)--no abnormalities. Purkinje cells well visualized, rep delineated 6.5 Brain Brain - Cerebellum 0002037 610 753 BP-44437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.987075 425468 0.946467 0.989993 0.706533 23523 1 76 0.00224312 127 0 7.27987e+07 0.0531644 831539 7.35346e+07 6.93096e+06 23549 3.61802e+07 0 0.239934 0.989993 0.699463 7.27987e+07 0.00337505 1.57095e+07 1.21937e+07 1.58083e+07 162 1.58787e+07 9.39372e+06 0.00280742 1.58334e+07 49.9286 0.0113081 0.992911 0 50.1567 GTEX-12ZZY-3026-SM-5GCOU 1 C1 4 pieces, no abnormalities 6.7 Brain Brain - Cortex 0001870 614 750 BP-44172 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.984689 291731 0.96282 0.989487 0.801645 23830 1 76 0.00210515 201 0 6.94647e+07 0.0368342 1.91984e+06 7.02028e+07 6.24098e+06 23851 3.4481e+07 0 0.161175 0.989487 0.793218 6.94647e+07 0.00328871 1.52227e+07 1.00392e+07 1.52478e+07 206 1.52983e+07 8.88989e+06 0.00269406 1.54797e+07 50.2948 0.0273471 0.994285 0 50.0411 GTEX-12ZZY-3126-SM-5DUX3 1 C1 1 piece, mainly adenohypophysis; 2.5x1mm nubbin of neurohypophysis delineated. 7.1 Pituitary Pituitary 0000007 614 750 BP-44437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.987983 304628 0.959918 0.991522 0.776112 24164 1 76 0.00197177 127 0 6.12174e+07 0.0397203 228653 6.17409e+07 5.71316e+06 24189 3.04284e+07 0 0.183806 0.991522 0.769532 6.12174e+07 0.00317812 1.29548e+07 9.49624e+06 1.30416e+07 139 1.31141e+07 1.00921e+07 0.00257279 1.30835e+07 49.9416 0.00370343 0.995061 0 50.1669 GTEX-12ZZZ-0002-SM-5ANGD B1 Blood Whole Blood 0013756 610 BP-42481 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/20/2013 LCSET-4718 02/04/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-12ZZZ-0002-SM-5DWRU B1 Blood Whole Blood 0013756 610 BP-42481 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/20/2013 GTEx_OM25_Dec_01 01/28/2014 Illumina OMNI SNP Array OMNI GTEX-12ZZZ-0002-SM-6WSCB B1 Blood Whole Blood 0013756 610 BP-42481 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/20/2013 LCSET-6235 10/02/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-12ZZZ-0008-SM-5YY9S B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 821 BP-46001 RNA isolation_Trizol Manual (Cell Pellet) 11/20/2013 LCSET-5304 05/19/2014 TruSeq.v1 RNASEQ 0.993319 517959 0.976502 0.994439 0.856045 20830 1 76 0.00224333 286 0 1.03981e+08 0.023213 397934 1.04563e+08 4.6312e+06 20853 5.18132e+07 0 0.120457 0.994439 0.851285 1.03981e+08 0.00274545 2.3345e+07 1.61088e+07 2.34703e+07 271 2.34824e+07 2.72277e+07 0.0024941 2.34588e+07 49.9749 0.00380569 0.995559 0 50.1337 GTEX-12ZZZ-0011-R10a-SM-5P9HC B1, A1 6.6 Brain Brain - Frontal Cortex (BA9) 0009834 640 BP-44878 RNA isolation_PAXgene Tissue miRNA 10/22/2013 LCSET-4914 03/27/2014 TruSeq.v1 RNASEQ 0.991848 1.02943e+06 0.959421 0.992341 0.847804 24002 1 76 0.00273664 372 0 1.17635e+08 0.0401274 4.82232e+06 1.18543e+08 3.84492e+06 24027 5.85791e+07 0 0.111617 0.992341 0.841311 1.17635e+08 0.00336154 2.54382e+07 3.64185e+07 2.57614e+07 352 2.55929e+07 1.43024e+07 0.00304894 2.56773e+07 50.0824 0.04068 0.992833 0 50.3156 GTEX-12ZZZ-0011-R10a-SM-AHZ6M B1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 640 ChIP-Seq GTEX-12ZZZ-0011-R11a-SM-5EGLC B1, A1 7.6 Brain Brain - Cerebellar Hemisphere 0002037 640 BP-44878 RNA isolation_PAXgene Tissue miRNA 10/22/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.989709 1.64587e+06 0.946955 0.992367 0.776079 25920 1 76 0.00194177 378 0 1.75584e+08 0.0523839 3.10579e+06 1.76934e+08 1.63601e+07 25967 8.72939e+07 0 0.170876 0.992367 0.770155 1.75584e+08 0.00284415 3.77787e+07 4.25176e+07 3.8049e+07 352 3.8149e+07 2.59316e+07 0.00239175 3.81296e+07 49.9873 0.0175534 0.995025 0 50.1782 GTEX-12ZZZ-0011-R3b-SM-5DUXK B1, A1 6.5 Brain Brain - Anterior cingulate cortex (BA24) 0009835 640 BP-43982 RNA isolation_PAXgene Tissue miRNA 09/26/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.989339 598131 0.964498 0.992024 0.842492 22854 1 76 0.00178113 269 0 7.79830e+07 0.0351525 5.15710e+06 7.861e+07 6.49351e+06 22868 3.87957e+07 0 0.122006 0.992024 0.835773 7.79830e+07 0.00292016 1.70822e+07 2.54354e+07 1.6992e+07 288 1.68646e+07 8.54856e+06 0.0023491 1.73953e+07 50.7745 0.0656036 0.994709 0 49.8677 GTEX-12ZZZ-0011-R4b-SM-5DUV7 B1, A1 6.1 Brain Brain - Amygdala 0001876 640 BP-43982 RNA isolation_PAXgene Tissue miRNA 09/26/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.98557 365238 0.970535 0.98951 0.846201 20742 1 76 0.00181648 268 0 6.82199e+07 0.0293271 7.70131e+06 6.89431e+07 6.28669e+06 20751 3.3894e+07 0 0.124334 0.98951 0.837325 6.82199e+07 0.00331492 1.48646e+07 2.56287e+07 1.4959e+07 288 1.46153e+07 4.39181e+06 0.00256272 1.54302e+07 51.3561 0.111705 0.99345 0 50.1582 GTEX-12ZZZ-0011-R5a-SM-5EQ4M B1, A1 9 Brain Brain - Caudate (basal ganglia) 0001873 640 BP-44999 RNA isolation_PAXgene Tissue miRNA 10/24/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.989518 621768 0.957009 0.992848 0.820181 23718 1 76 0.00190474 268 0 7.66766e+07 0.0426195 3.11034e+06 7.7229e+07 1.02764e+07 23735 3.81228e+07 0 0.136828 0.992848 0.814315 7.66766e+07 0.00294373 1.66745e+07 2.42048e+07 1.66375e+07 264 1.66363e+07 9.03096e+06 0.0024225 1.69226e+07 50.4265 0.0402743 0.996177 0 49.9445 GTEX-12ZZZ-0011-R6b-SM-5EQ5B B1, A1 7.7 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 640 BP-44999 RNA isolation_PAXgene Tissue miRNA 10/24/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.991901 584799 0.960175 0.994067 0.830801 22993 1 76 0.00184887 269 0 8.11536e+07 0.0395207 5.83582e+06 8.1638e+07 9.47487e+06 23007 4.04061e+07 0 0.129374 0.994067 0.825872 8.11536e+07 0.00284336 1.7671e+07 3.18004e+07 1.75653e+07 292 1.7468e+07 8.52875e+06 0.00234503 1.79446e+07 50.673 0.0714842 0.996234 0 49.8501 GTEX-12ZZZ-0011-R7b-SM-5EGLE B1, A1 8.1 Brain Brain - Putamen (basal ganglia) 0001874 640 BP-44999 RNA isolation_PAXgene Tissue miRNA 10/24/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.988631 659336 0.961193 0.991377 0.82358 23212 1 76 0.00175966 269 0 8.71828e+07 0.0385453 6.00758e+06 8.7941e+07 7.0193e+06 23226 4.33646e+07 0 0.137613 0.991377 0.816478 8.71828e+07 0.00282624 1.87968e+07 3.7089e+07 1.88073e+07 312 1.87135e+07 8.65067e+06 0.00229147 1.91035e+07 50.5157 0.0683137 0.994124 0 50.014 GTEX-12ZZZ-0226-SM-59HKU 1 B1 2 pieces; 20% and 10% internal fat 6.6 Muscle Muscle - Skeletal 0011907 814 1071 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4419 01/14/2014 TruSeq.v1 RNASEQ 0.984872 208051 0.977323 0.990069 0.848836 20180 1 76 0.00226318 109 0 5.70531e+07 0.0224986 634111 5.76254e+07 1.03325e+07 20189 2.83209e+07 0 0.128487 0.990069 0.840406 5.70531e+07 0.00830088 1.24403e+07 6.35702e+06 1.24376e+07 122 1.25417e+07 1.17874e+07 0.00526618 1.26048e+07 50.1255 0.011004 0.995266 0 49.9945 GTEX-12ZZZ-0526-SM-5DUX6 1 B1 2 pieces; several central empty spaces 6.2 Adipose Tissue Adipose - Subcutaneous 0002190 819 1066 BP-44437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.988306 226979 0.976094 0.991752 0.798043 21872 1 76 0.00188156 129 0 5.51485e+07 0.0236141 307747 5.56072e+07 4.85351e+06 21895 2.7407e+07 0 0.17805 0.991752 0.791461 5.51485e+07 0.00318438 1.21008e+07 5.31376e+06 1.21483e+07 133 1.21751e+07 9.53325e+06 0.0025307 1.22548e+07 50.1631 0.00553431 0.995198 0 50.098 GTEX-12ZZZ-0626-SM-5DUXI 0 B1 6 pieces; well trimmed; 10% intradermal fat 7.3 Skin Skin - Sun Exposed (Lower leg) 0004264 822 1063 BP-44437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.988687 270565 0.97097 0.991427 0.794073 22641 1 76 0.00194609 141 0 5.99382e+07 0.0288236 303802 6.04565e+07 5.78906e+06 22663 2.98216e+07 0 0.176897 0.991427 0.787265 5.99382e+07 0.00300458 1.31014e+07 8.15378e+06 1.31812e+07 141 1.32028e+07 1.03076e+07 0.00247387 1.32347e+07 50.0604 0.00502513 0.994167 0 50.152 GTEX-12ZZZ-0726-SM-5GCNZ 0 B1 6 pieces; well trimmed; <10% intradermal fat 7.5 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 839 1046 BP-44172 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795,LCSET-5132 03/08/2014 TruSeq.v1 RNASEQ 0.987994 283106 0.971556 0.991389 0.775228 23363 1 76 0.00232548 184 0 8.00419e+07 0.0282147 312925 8.07371e+07 5.55263e+06 23398 3.97914e+07 0 0.196327 0.991389 0.768553 8.00419e+07 0.0034912 1.75493e+07 9.80507e+06 1.76455e+07 189 1.7684e+07 1.32416e+07 0.00290635 1.77709e+07 50.1225 0.00387585 0.994783 0 50.1366 GTEX-12ZZZ-0926-SM-5N9EQ 1 B1 2 pieces; cortex; 10% internal fat 5.7 Adrenal Gland Adrenal Gland 0002369 848 1037 BP-44172 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.988682 467105 0.965674 0.990235 0.803841 23846 1 76 0.00401083 271 0 9.86289e+07 0.0341278 6.38536e+06 9.96016e+07 5.22097e+06 23875 4.90121e+07 0 0.161833 0.990235 0.795991 9.86289e+07 0.00414787 2.15488e+07 1.86846e+07 2.16988e+07 330 2.1688e+07 1.0949e+07 0.00407924 2.17161e+07 50.0324 0.0641091 0.991788 0 50.1734 GTEX-12ZZZ-1226-SM-59HK1 2 B1 2 pieces 7.1 Thyroid Thyroid 0002046 855 1030 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4419 01/14/2014 TruSeq.v1 RNASEQ 0.983896 227684 0.971366 0.989569 0.820408 24012 1 76 0.00242071 147 0 7.83709e+07 0.0282664 262222 7.9197e+07 1.41149e+07 24043 3.88572e+07 0 0.150957 0.989569 0.81185 7.83709e+07 0.00867914 1.70999e+07 8.9534e+06 1.72225e+07 165 1.73734e+07 1.55155e+07 0.00553198 1.73637e+07 49.9861 0.00331101 0.995241 0 50.1786 GTEX-12ZZZ-1326-SM-59HKW 1 B1 3 pieces; moderate macrovesicular steatosis 5.8 Liver Liver 0001114 857 1028 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4419 01/14/2014 TruSeq.v1 RNASEQ 0.980928 308403 0.974185 0.986919 0.835461 20290 1 76 0.00236034 365 0 8.0522e+07 0.025769 4.09243e+06 8.15892e+07 1.42174e+07 20302 3.99399e+07 0 0.138724 0.986919 0.824532 8.0522e+07 0.0089122 1.79757e+07 3.44321e+07 1.7564e+07 339 1.73072e+07 3.38468e+06 0.00561638 1.85311e+07 51.7075 0.0501589 0.992911 0 49.4208 GTEX-12ZZZ-1726-SM-59HK5 1 B1 2 pieces; patchy scars (annotated) consistent with old infarcts 6.4 Heart Heart - Left Ventricle 0006566 865 1020 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4419 01/14/2014 TruSeq.v1 RNASEQ 0.978658 159341 0.982835 0.984637 0.864582 20824 1 76 0.0024222 194 0 7.23802e+07 0.0169984 6.80031e+06 7.35096e+07 1.32601e+07 20834 3.59026e+07 0 0.118253 0.984637 0.851299 7.23802e+07 0.00888224 1.63417e+07 1.49253e+07 1.60094e+07 225 1.60876e+07 8.36607e+06 0.0056326 1.66119e+07 50.8017 0.0925092 0.990616 0 49.4864 GTEX-12ZZZ-2026-SM-5LZWJ 3 B1 2 pieces; glands largely autolyzed, fibromuscular stroma slightly autolyzed 6 Prostate Prostate 0002367 878 1007 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.988744 149284 0.966945 0.989772 0.788777 23888 1 76 0.002518 131 0 6.05077e+07 0.0327449 624205 6.11329e+07 3.07299e+06 23912 3.01035e+07 0 0.178168 0.989772 0.78071 6.05077e+07 0.0032312 1.33319e+07 6.05434e+06 1.34208e+07 148 1.3407e+07 8.96684e+06 0.00287423 1.34096e+07 50.0049 0.0102106 0.9908 0 50.1662 GTEX-12ZZZ-2426-SM-5GCNN 3 B1 6 pieces; mucosa completely autolyzed; muscularis intact and mildly autolyzed 6.1 Colon Colon - Transverse 0001157 891 994 BP-44172 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.978927 205043 0.971468 0.984741 0.833048 23165 1 76 0.00214366 159 0 6.92312e+07 0.0282449 988703 7.0304e+07 6.406e+06 23180 3.42966e+07 0 0.138421 0.984741 0.820336 6.92312e+07 0.00359408 1.49035e+07 6.77354e+06 1.50099e+07 179 1.50499e+07 1.09974e+07 0.00286459 1.52438e+07 50.3199 0.0140633 0.990555 0 50.1778 GTEX-12ZZZ-3026-SM-5BC67 1 B1 2 pieces; small amount of meninges present 6.2 Brain Brain - Cortex 0001870 935 950 BP-43916 RNA Extraction from Paxgene-derived Lysate Plate Based 09/24/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.98922 326867 0.960641 0.99289 0.819695 23159 1 76 0.00261905 141 0 6.01926e+07 0.0390741 2.66088e+06 6.06236e+07 1.37009e+07 23178 2.99088e+07 0 0.140945 0.99289 0.813867 6.01926e+07 0.00504175 1.32062e+07 1.25417e+07 1.31607e+07 169 1.31387e+07 6.19764e+06 0.00382592 1.34275e+07 50.5437 0.0438918 0.99656 0 49.9136 GTEX-12ZZZ-3126-SM-5LZU6 1 B1 2 pieces 6.7 Brain Brain - Cerebellum 0002037 936 949 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.990396 453333 0.943009 0.991622 0.734245 23769 1 76 0.00264955 200 0 8.2642e+07 0.0566584 1.49234e+06 8.33402e+07 3.93603e+06 23795 4.11335e+07 0 0.208764 0.991622 0.728093 8.2642e+07 0.00334484 1.77393e+07 2.00802e+07 1.79714e+07 219 1.7973e+07 9.66619e+06 0.00299677 1.78355e+07 49.808 0.0179066 0.992847 0 50.325 GTEX-13111-0002-SM-5TDBU B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 1188 BP-45438 RNA isolation_Trizol Manual (Cell Pellet) 11/04/2013 LCSET-5048 04/03/2014 TruSeq.v1 RNASEQ 0.988222 734441 0.964473 0.991604 0.812075 22436 1 76 0.00279274 177 0 8.41923e+07 0.0329001 710448 8.49052e+07 1.08485e+07 22456 4.17513e+07 0 0.152398 0.991604 0.805256 8.41923e+07 0.00453098 1.86188e+07 1.66844e+07 1.87004e+07 180 1.877e+07 1.82091e+07 0.0036589 1.88331e+07 50.0839 0.00836754 0.994985 0 50.1092 GTEX-13111-0003-SM-5ANG9 B1 Blood Whole Blood 0013756 1188 BP-42481 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/20/2013 LCSET-4718 02/04/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-13111-0003-SM-5DWRJ B1 Blood Whole Blood 0013756 1188 BP-42481 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/20/2013 GTEx_OM25_Dec_01 01/28/2014 Illumina OMNI SNP Array OMNI GTEX-13111-0003-SM-6WSCF B1 Blood Whole Blood 0013756 1188 BP-42481 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/20/2013 LCSET-6066 09/26/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-13111-0005-SM-5NQ7Z B1 8.5 Blood Whole Blood 0013756 1188 BP-42484 RNA isolation_PAXgene Blood RNA (Manual) 08/20/2013 LCSET-4906 03/22/2014 TruSeq.v1 RNASEQ 0.991748 805796 0.959289 0.993333 0.815801 19116 1 76 0.00245378 160 0 8.51691e+07 0.0400476 367898 8.57407e+07 6.80136e+06 19127 4.23997e+07 0 0.143487 0.993333 0.810362 8.51691e+07 0.0034413 1.86711e+07 4.80321e+07 1.88599e+07 176 1.88619e+07 1.81306e+07 0.00294675 1.88209e+07 49.9456 0.00429082 0.994919 0 50.2515 GTEX-13111-0008-SM-5YY8R B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 324 BP-46001 RNA isolation_Trizol Manual (Cell Pellet) 11/20/2013 LCSET-5304 05/19/2014 TruSeq.v1 RNASEQ 0.991901 577543 0.978745 0.993077 0.856778 20814 1 76 0.00220978 292 0 1.13431e+08 0.0209313 327426 1.14222e+08 4.8928e+06 20833 5.65198e+07 0 0.121967 0.993077 0.850847 1.13431e+08 0.00280042 2.55328e+07 1.62264e+07 2.56165e+07 282 2.56454e+07 2.98226e+07 0.00250475 2.56443e+07 49.999 0.00286657 0.994254 0 50.0819 GTEX-13111-0126-SM-5EGHO 1 B1 2 pieces; 7.2 Spleen Spleen 0002106 266 503 BP-44901 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4764,LCSET-5055 02/26/2014 TruSeq.v1 RNASEQ 0.98623 242597 0.965799 0.989044 0.779209 24709 1 76 0.00302243 204 0 8.59779e+07 0.032564 480397 8.69303e+07 9.61613e+06 24741 4.26944e+07 0 0.18659 0.989044 0.770672 8.59779e+07 0.00496962 1.89883e+07 1.16334e+07 1.90561e+07 224 1.90792e+07 1.31199e+07 0.00399325 1.91948e+07 50.151 0.00552623 0.991859 0 50.0892 GTEX-13111-0226-SM-5EQ55 1 B1 2 pieces; multifocal mild stromal fibrosis compromising thyroid follicles 6.6 Thyroid Thyroid 0002046 270 499 BP-44901 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.991536 218574 0.967948 0.993719 0.754558 23590 1 76 0.00202876 120 0 5.85228e+07 0.0318031 233825 5.88927e+07 6.91962e+06 23621 2.91241e+07 0 0.21339 0.993719 0.749819 5.85228e+07 0.00302365 1.28106e+07 5.53515e+06 1.28727e+07 136 1.28543e+07 8.66358e+06 0.00252511 1.29521e+07 50.1895 0.00397035 0.995902 0 50.1209 GTEX-13111-0326-SM-5DUXF 1 B1 2 pieces; one with 80% and other with 40% of external fat; adrenal cortex 7.4 Adrenal Gland Adrenal Gland 0002369 272 497 BP-44437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.988589 256162 0.977421 0.991948 0.829558 22015 1 76 0.00207912 155 0 6.7857e+07 0.0223063 1.37011e+06 6.84078e+07 6.49973e+06 22032 3.3741e+07 0 0.147862 0.991948 0.822879 6.7857e+07 0.00318106 1.48974e+07 1.2427e+07 1.4931e+07 185 1.49133e+07 9.62728e+06 0.00262822 1.511e+07 50.3276 0.0200286 0.995306 0 50.0564 GTEX-13111-0426-SM-5DUXR 1 B1 2 pieces; thickening of the alveolar walls (fibrossi) with accumulation of a large number of mononuclear cells and hemosiderinophages; patchy lymphocytic interstitial infiltrates with associated hemosiderinophages; one piece contains thickened visceral pleura marked) 7.5 Lung Lung 0008952 273 496 BP-44437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.989217 220898 0.973098 0.991938 0.782813 23680 1 76 0.00234942 133 0 6.26974e+07 0.0260246 442172 6.3207e+07 5.95976e+06 23705 3.11724e+07 0 0.190285 0.991938 0.776502 6.26974e+07 0.00340148 1.39062e+07 6.89961e+06 1.39968e+07 145 1.39978e+07 1.01132e+07 0.00287401 1.40684e+07 50.1258 0.00699562 0.994658 0 50.1622 GTEX-13111-0526-SM-5LZVF 1 B1 6 pieces; early plaque formation; all have up to 1.5mm attached adventitial fat 7.3 Blood Vessel Artery - Aorta 0001496 279 490 BP-43956 RNA Extraction from Paxgene-derived Lysate Plate Based 09/25/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.991996 170431 0.975361 0.993213 0.82771 22041 1 76 0.00245828 140 0 6.33066e+07 0.0242234 245920 6.37392e+07 3.21294e+06 22055 3.15265e+07 0 0.147651 0.993213 0.822092 6.33066e+07 0.00311285 1.3801e+07 4.77968e+06 1.39459e+07 150 1.39222e+07 1.13096e+07 0.00278516 1.38974e+07 49.9553 0.00385822 0.994429 0 50.261 GTEX-13111-0626-SM-5LZVR 1 B1 2 pieces; focal fresh mild hemorrhage (outlined) 7.6 Adipose Tissue Adipose - Visceral (Omentum) 0010414 282 487 BP-43956 RNA Extraction from Paxgene-derived Lysate Plate Based 09/25/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.991638 208917 0.976733 0.992865 0.819449 22011 1 76 0.00244652 164 0 6.90169e+07 0.0230247 569451 6.95128e+07 3.33874e+06 22031 3.43753e+07 0 0.157285 0.992865 0.813602 6.90169e+07 0.00312629 1.51336e+07 8.1984e+06 1.53436e+07 177 1.52854e+07 1.06204e+07 0.00278598 1.52686e+07 49.9725 0.00819203 0.994092 0 50.3444 GTEX-13111-0726-SM-5DUVE 1 B1 6 pieces; full thickness of colonic wall 6.9 Colon Colon - Transverse 0001157 286 483 BP-44437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.987779 393806 0.968822 0.991286 0.809733 22547 1 76 0.00225982 135 0 5.95879e+07 0.0300538 1.0787e+06 6.01117e+07 4.94194e+06 22569 2.95799e+07 0 0.159089 0.991286 0.802677 5.95879e+07 0.00362649 1.31996e+07 1.22139e+07 1.31949e+07 155 1.31515e+07 7.98389e+06 0.00294074 1.34317e+07 50.527 0.0179448 0.994793 0 49.991 GTEX-13111-0826-SM-5LZV3 1 B1 6 pieces; small aggregates of lymphocytes in lamina propria; squamous epithelium measures 315.6um 9 Esophagus Esophagus - Mucosa 0006920 288 481 BP-43956 RNA Extraction from Paxgene-derived Lysate Plate Based 09/25/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.991209 173336 0.977252 0.992435 0.840857 22100 1 76 0.00257414 146 0 6.64511e+07 0.0222244 253169 6.69576e+07 3.26553e+06 22117 3.31055e+07 0 0.136395 0.992435 0.834496 6.64511e+07 0.00316586 1.49846e+07 8.82311e+06 1.50607e+07 150 1.50764e+07 1.39088e+07 0.00286963 1.50484e+07 49.9535 0.00378104 0.993661 0 50.1266 GTEX-13111-0926-SM-5DUVQ 1 B1 6 pieces; well trimmed 7.8 Esophagus Esophagus - Muscularis 0004648 290 479 BP-44437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.98765 1.48208e+06 0.914969 0.990083 0.752033 21784 1 76 0.00186998 159 0 7.28882e+07 0.0846934 789023 7.36183e+07 6.09778e+06 21802 3.62749e+07 0 0.162936 0.990083 0.744575 7.28882e+07 0.00290259 1.46027e+07 5.75507e+07 1.48229e+07 169 1.47708e+07 1.07034e+07 0.00238501 1.4841e+07 50.1184 0.0107178 0.992515 0 50.374 GTEX-13111-1126-SM-5GCMZ 1 B1 6 pieces; smooth muscle layers with adherent serosal fat on 5 of 6 pieces, up to 1.3 mm thick 7.9 Esophagus Esophagus - Gastroesophageal Junction 0004550 295 474 BP-44172 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.986125 197928 0.978366 0.990833 0.832435 22036 1 76 0.00205705 145 0 6.49648e+07 0.0213444 546385 6.55659e+07 5.54854e+06 22055 3.22559e+07 0 0.145931 0.990833 0.824804 6.49648e+07 0.00329989 1.40633e+07 6.33963e+06 1.41392e+07 161 1.41929e+07 1.09627e+07 0.00267552 1.42925e+07 50.1748 0.00833337 0.995541 0 50.1346 GTEX-13111-1226-SM-5GCNC 1 B1 6 pieces; mucosa missing on all pieces; only muscularis and submucosa present 7.3 Stomach Stomach 0000945 300 469 BP-44172 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.985575 226492 0.975222 0.990572 0.805276 22301 1 76 0.00205885 133 0 5.90093e+07 0.0245364 470290 5.95709e+07 4.84057e+06 22315 2.92823e+07 0 0.169945 0.990572 0.797684 5.90093e+07 0.00338501 1.28784e+07 5.89402e+06 1.29369e+07 144 1.29705e+07 9.26579e+06 0.00271859 1.31194e+07 50.2854 0.00789463 0.995569 0 50.1135 GTEX-13111-1326-SM-5GCNO 1 B1 2 pieces; 1 shows stromal fibrosis, numerous corpora amylacea; second piece consists of 25% glandular component (outlined) and 75% fibromuscular stroma 7 Prostate Prostate 0002367 306 463 BP-44172 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.984149 196910 0.970854 0.989421 0.811417 23489 1 76 0.00211891 136 0 6.62781e+07 0.028878 496496 6.69868e+07 5.77938e+06 23510 3.28856e+07 0 0.159437 0.989421 0.802833 6.62781e+07 0.00336612 1.41921e+07 5.56295e+06 1.42803e+07 154 1.43368e+07 1.12325e+07 0.00273919 1.44592e+07 50.2125 0.00741185 0.994692 0 50.1549 GTEX-13111-1426-SM-5DUW3 1 B1 6 pieces; each piece contains one to two well p