Class org.broadinstitute.hellbender.tools.walkers.sv.SVClusterIntegrationTest
Tests
| Test |
Duration |
Result |
| testAgainstSimpleImplementation |
1.854s |
passed |
| testAllosome |
0.610s |
passed |
| testCleanedVcf |
1.009s |
passed |
| testClusterMaxClique[0](true) |
1.112s |
passed |
| testClusterMaxClique[1](false) |
1.053s |
passed |
| testClusterSampleOverlap |
0.911s |
passed |
| testClusterSingleLinkage |
1.019s |
passed |
| testDefragmentation |
0.397s |
passed |
| testMergeHelper[0](true) |
0.577s |
passed |
| testMergeHelper[1](false) |
0.561s |
passed |
Standard error
[May 19, 2025 at 4:10:57 PM GMT] org.broadinstitute.hellbender.tools.walkers.sv.SVCluster done. Elapsed time: 0.02 minutes.
Runtime.totalMemory()=1356857344
[May 19, 2025 at 4:10:58 PM GMT] org.broadinstitute.hellbender.tools.walkers.sv.SVCluster done. Elapsed time: 0.01 minutes.
Runtime.totalMemory()=1356857344
[May 19, 2025 at 4:10:59 PM GMT] org.broadinstitute.hellbender.tools.walkers.sv.SVCluster done. Elapsed time: 0.01 minutes.
Runtime.totalMemory()=1356857344
[May 19, 2025 at 4:11:00 PM GMT] org.broadinstitute.hellbender.tools.walkers.sv.SVCluster done. Elapsed time: 0.02 minutes.
Runtime.totalMemory()=1356857344
[May 19, 2025 at 4:11:01 PM GMT] org.broadinstitute.hellbender.tools.walkers.sv.SVCluster done. Elapsed time: 0.02 minutes.
Runtime.totalMemory()=1356857344
[May 19, 2025 at 4:11:02 PM GMT] org.broadinstitute.hellbender.tools.walkers.sv.SVCluster done. Elapsed time: 0.01 minutes.
Runtime.totalMemory()=1356857344
[May 19, 2025 at 4:11:03 PM GMT] org.broadinstitute.hellbender.tools.walkers.sv.SVCluster done. Elapsed time: 0.02 minutes.
Runtime.totalMemory()=1356857344
[May 19, 2025 at 4:11:03 PM GMT] org.broadinstitute.hellbender.tools.walkers.sv.SVCluster done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1356857344
[May 19, 2025 at 4:11:04 PM GMT] org.broadinstitute.hellbender.tools.walkers.sv.SVCluster done. Elapsed time: 0.01 minutes.
Runtime.totalMemory()=1356857344
[May 19, 2025 at 4:11:05 PM GMT] org.broadinstitute.hellbender.tools.walkers.sv.SVCluster done. Elapsed time: 0.01 minutes.
Runtime.totalMemory()=1356857344