Class org.broadinstitute.hellbender.tools.spark.PileupSparkIntegrationTest
Tests
| Test |
Duration |
Result |
| testFeaturesPileupHdfs[0](false) |
2.307s |
passed |
| testFeaturesPileupHdfs[1](true) |
2.027s |
passed |
| testFeaturesPileup[0](false) |
0.866s |
passed |
| testFeaturesPileup[1](true) |
0.451s |
passed |
| testInsertLengthPileup[0](false) |
0.430s |
passed |
| testInsertLengthPileup[1](true) |
0.378s |
passed |
| testSimplePileup[0](false) |
0.440s |
passed |
| testSimplePileup[1](true) |
0.338s |
passed |
| testVerbosePileup[0](false) |
0.425s |
passed |
| testVerbosePileup[1](true) |
0.364s |
passed |
Standard error
[May 19, 2025 at 3:43:40 PM UTC] org.broadinstitute.hellbender.tools.spark.PileupSpark done. Elapsed time: 0.01 minutes.
Runtime.totalMemory()=931135488
[May 19, 2025 at 3:43:41 PM UTC] org.broadinstitute.hellbender.tools.spark.PileupSpark done. Elapsed time: 0.01 minutes.
Runtime.totalMemory()=931135488
[May 19, 2025 at 3:43:43 PM UTC] org.broadinstitute.hellbender.tools.spark.PileupSpark done. Elapsed time: 0.02 minutes.
Runtime.totalMemory()=931135488
15:43:43.445 ERROR DataNode - Command processor encountered interrupt and exit.
[May 19, 2025 at 3:43:45 PM UTC] org.broadinstitute.hellbender.tools.spark.PileupSpark done. Elapsed time: 0.01 minutes.
Runtime.totalMemory()=874512384
15:43:45.472 ERROR DataNode - Command processor encountered interrupt and exit.
[May 19, 2025 at 3:43:45 PM UTC] org.broadinstitute.hellbender.tools.spark.PileupSpark done. Elapsed time: 0.01 minutes.
Runtime.totalMemory()=874512384
[May 19, 2025 at 3:43:46 PM UTC] org.broadinstitute.hellbender.tools.spark.PileupSpark done. Elapsed time: 0.01 minutes.
Runtime.totalMemory()=874512384
[May 19, 2025 at 3:43:46 PM UTC] org.broadinstitute.hellbender.tools.spark.PileupSpark done. Elapsed time: 0.01 minutes.
Runtime.totalMemory()=874512384
[May 19, 2025 at 3:43:47 PM UTC] org.broadinstitute.hellbender.tools.spark.PileupSpark done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=874512384
[May 19, 2025 at 3:43:47 PM UTC] org.broadinstitute.hellbender.tools.spark.PileupSpark done. Elapsed time: 0.01 minutes.
Runtime.totalMemory()=874512384
[May 19, 2025 at 3:43:47 PM UTC] org.broadinstitute.hellbender.tools.spark.PileupSpark done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=874512384