Class org.broadinstitute.hellbender.tools.walkers.annotator.VariantAnnotatorIntegrationTest
Tests
| Test |
Duration |
Result |
| addQdToGvsVcf |
0.122s |
passed |
| testAgainstMutect2 |
3.529s |
passed |
| testComp |
0.150s |
passed |
| testDBSNP |
0.090s |
passed |
| testDeNovo |
0.111s |
passed |
| testNoReads |
0.071s |
passed |
| testResource |
0.214s |
passed |
| testValidationReadsDontMatch |
0.064s |
passed |
Standard error
[May 19, 2025 at 3:47:39 PM UTC] org.broadinstitute.hellbender.tools.walkers.annotator.VariantAnnotator done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1337982976
[May 19, 2025 at 3:47:41 PM UTC] org.broadinstitute.hellbender.tools.walkers.mutect.Mutect2 done. Elapsed time: 0.03 minutes.
Runtime.totalMemory()=1337982976
[May 19, 2025 at 3:47:42 PM UTC] org.broadinstitute.hellbender.tools.walkers.mutect.Mutect2 done. Elapsed time: 0.02 minutes.
Runtime.totalMemory()=1337982976
[May 19, 2025 at 3:47:42 PM UTC] org.broadinstitute.hellbender.tools.walkers.annotator.VariantAnnotator done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1337982976
[May 19, 2025 at 3:47:43 PM UTC] org.broadinstitute.hellbender.tools.walkers.annotator.VariantAnnotator done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1337982976
[May 19, 2025 at 3:47:43 PM UTC] org.broadinstitute.hellbender.tools.walkers.annotator.VariantAnnotator done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1337982976
[May 19, 2025 at 3:47:43 PM UTC] org.broadinstitute.hellbender.tools.walkers.annotator.VariantAnnotator done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1337982976
[May 19, 2025 at 3:47:43 PM UTC] org.broadinstitute.hellbender.tools.walkers.annotator.VariantAnnotator done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1337982976
[May 19, 2025 at 3:47:43 PM UTC] org.broadinstitute.hellbender.tools.walkers.annotator.VariantAnnotator done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1337982976
[May 19, 2025 at 3:47:43 PM UTC] org.broadinstitute.hellbender.tools.walkers.annotator.VariantAnnotator done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1337982976
[May 19, 2025 at 3:47:43 PM UTC] org.broadinstitute.hellbender.tools.walkers.annotator.VariantAnnotator done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1337982976
[May 19, 2025 at 3:47:43 PM UTC] org.broadinstitute.hellbender.tools.walkers.annotator.VariantAnnotator done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1337982976
[May 19, 2025 at 3:47:43 PM UTC] org.broadinstitute.hellbender.tools.walkers.annotator.VariantAnnotator done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1337982976