Class org.broadinstitute.hellbender.tools.walkers.sv.SVClusterIntegrationTest
Tests
| Test |
Duration |
Result |
| testAgainstSimpleImplementation |
1.825s |
passed |
| testAllosome |
0.588s |
passed |
| testCleanedVcf |
1.007s |
passed |
| testClusterMaxClique[0](true) |
1.079s |
passed |
| testClusterMaxClique[1](false) |
1.094s |
passed |
| testClusterSampleOverlap |
0.905s |
passed |
| testClusterSingleLinkage |
1.030s |
passed |
| testDefragmentation |
0.399s |
passed |
| testMergeHelper[0](true) |
0.566s |
passed |
| testMergeHelper[1](false) |
0.551s |
passed |
Standard error
[May 27, 2025 at 2:13:58 PM GMT] org.broadinstitute.hellbender.tools.walkers.sv.SVCluster done. Elapsed time: 0.02 minutes.
Runtime.totalMemory()=970981376
[May 27, 2025 at 2:13:59 PM GMT] org.broadinstitute.hellbender.tools.walkers.sv.SVCluster done. Elapsed time: 0.01 minutes.
Runtime.totalMemory()=970981376
[May 27, 2025 at 2:14:00 PM GMT] org.broadinstitute.hellbender.tools.walkers.sv.SVCluster done. Elapsed time: 0.01 minutes.
Runtime.totalMemory()=970981376
[May 27, 2025 at 2:14:01 PM GMT] org.broadinstitute.hellbender.tools.walkers.sv.SVCluster done. Elapsed time: 0.02 minutes.
Runtime.totalMemory()=1161822208
[May 27, 2025 at 2:14:02 PM GMT] org.broadinstitute.hellbender.tools.walkers.sv.SVCluster done. Elapsed time: 0.02 minutes.
Runtime.totalMemory()=1161822208
[May 27, 2025 at 2:14:03 PM GMT] org.broadinstitute.hellbender.tools.walkers.sv.SVCluster done. Elapsed time: 0.01 minutes.
Runtime.totalMemory()=1161822208
[May 27, 2025 at 2:14:04 PM GMT] org.broadinstitute.hellbender.tools.walkers.sv.SVCluster done. Elapsed time: 0.02 minutes.
Runtime.totalMemory()=1161822208
[May 27, 2025 at 2:14:05 PM GMT] org.broadinstitute.hellbender.tools.walkers.sv.SVCluster done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1161822208
[May 27, 2025 at 2:14:05 PM GMT] org.broadinstitute.hellbender.tools.walkers.sv.SVCluster done. Elapsed time: 0.01 minutes.
Runtime.totalMemory()=1161822208
[May 27, 2025 at 2:14:06 PM GMT] org.broadinstitute.hellbender.tools.walkers.sv.SVCluster done. Elapsed time: 0.01 minutes.
Runtime.totalMemory()=1161822208