Class org.broadinstitute.hellbender.tools.spark.PileupSparkIntegrationTest
Tests
| Test |
Duration |
Result |
| testFeaturesPileupHdfs[0](false) |
1.855s |
passed |
| testFeaturesPileupHdfs[1](true) |
1.683s |
passed |
| testFeaturesPileup[0](false) |
0.841s |
passed |
| testFeaturesPileup[1](true) |
0.558s |
passed |
| testInsertLengthPileup[0](false) |
0.500s |
passed |
| testInsertLengthPileup[1](true) |
0.366s |
passed |
| testSimplePileup[0](false) |
0.412s |
passed |
| testSimplePileup[1](true) |
0.356s |
passed |
| testVerbosePileup[0](false) |
0.412s |
passed |
| testVerbosePileup[1](true) |
0.347s |
passed |
Standard error
[May 27, 2025 at 1:48:41 PM UTC] org.broadinstitute.hellbender.tools.spark.PileupSpark done. Elapsed time: 0.01 minutes.
Runtime.totalMemory()=895483904
[May 27, 2025 at 1:48:42 PM UTC] org.broadinstitute.hellbender.tools.spark.PileupSpark done. Elapsed time: 0.01 minutes.
Runtime.totalMemory()=895483904
[May 27, 2025 at 1:48:43 PM UTC] org.broadinstitute.hellbender.tools.spark.PileupSpark done. Elapsed time: 0.01 minutes.
Runtime.totalMemory()=895483904
13:48:43.982 ERROR DataNode - Command processor encountered interrupt and exit.
[May 27, 2025 at 1:48:45 PM UTC] org.broadinstitute.hellbender.tools.spark.PileupSpark done. Elapsed time: 0.01 minutes.
Runtime.totalMemory()=880803840
13:48:45.671 ERROR DataNode - Command processor encountered interrupt and exit.
[May 27, 2025 at 1:48:46 PM UTC] org.broadinstitute.hellbender.tools.spark.PileupSpark done. Elapsed time: 0.01 minutes.
Runtime.totalMemory()=880803840
[May 27, 2025 at 1:48:46 PM UTC] org.broadinstitute.hellbender.tools.spark.PileupSpark done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=880803840
[May 27, 2025 at 1:48:46 PM UTC] org.broadinstitute.hellbender.tools.spark.PileupSpark done. Elapsed time: 0.01 minutes.
Runtime.totalMemory()=880803840
[May 27, 2025 at 1:48:47 PM UTC] org.broadinstitute.hellbender.tools.spark.PileupSpark done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=880803840
[May 27, 2025 at 1:48:47 PM UTC] org.broadinstitute.hellbender.tools.spark.PileupSpark done. Elapsed time: 0.01 minutes.
Runtime.totalMemory()=880803840
[May 27, 2025 at 1:48:48 PM UTC] org.broadinstitute.hellbender.tools.spark.PileupSpark done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=880803840