Class org.broadinstitute.hellbender.tools.spark.pathseq.PathSeqBuildReferenceTaxonomyIntegrationTest
Tests
Test |
Duration |
Result |
testBadCatalog |
0.077s |
passed |
testBadTaxdump |
0.080s |
passed |
test[0](catalog.txt.gz, null, 0, tax.db) |
0.100s |
passed |
test[1](catalog.txt.gz, null, 50, tax_min50.db) |
0.087s |
passed |
test[2](null, genbank.txt.gz, 0, tax_genbank.db) |
0.078s |
passed |
Standard error
[May 27, 2025 at 3:11:22 PM GMT] org.broadinstitute.hellbender.tools.spark.pathseq.PathSeqBuildReferenceTaxonomy done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=931135488
[May 27, 2025 at 3:11:22 PM GMT] org.broadinstitute.hellbender.tools.spark.pathseq.PathSeqBuildReferenceTaxonomy done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=931135488
[May 27, 2025 at 3:11:22 PM GMT] org.broadinstitute.hellbender.tools.spark.pathseq.PathSeqBuildReferenceTaxonomy done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=931135488
[May 27, 2025 at 3:11:22 PM GMT] org.broadinstitute.hellbender.tools.spark.pathseq.PathSeqBuildReferenceTaxonomy done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=931135488
[May 27, 2025 at 3:11:22 PM GMT] org.broadinstitute.hellbender.tools.spark.pathseq.PathSeqBuildReferenceTaxonomy done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=931135488