Class org.broadinstitute.hellbender.tools.walkers.sv.SVClusterIntegrationTest
Tests
| Test |
Duration |
Result |
| testAgainstSimpleImplementation |
1.646s |
passed |
| testAllosome |
0.589s |
passed |
| testCleanedVcf |
1.025s |
passed |
| testClusterMaxClique[0](true) |
1.089s |
passed |
| testClusterMaxClique[1](false) |
1.018s |
passed |
| testClusterSampleOverlap |
1.009s |
passed |
| testClusterSingleLinkage |
0.996s |
passed |
| testDefragmentation |
0.420s |
passed |
| testMergeHelper[0](true) |
0.638s |
passed |
| testMergeHelper[1](false) |
0.550s |
passed |
Standard error
[May 27, 2025 at 3:21:05 PM GMT] org.broadinstitute.hellbender.tools.walkers.sv.SVCluster done. Elapsed time: 0.02 minutes.
Runtime.totalMemory()=952107008
[May 27, 2025 at 3:21:06 PM GMT] org.broadinstitute.hellbender.tools.walkers.sv.SVCluster done. Elapsed time: 0.01 minutes.
Runtime.totalMemory()=952107008
[May 27, 2025 at 3:21:07 PM GMT] org.broadinstitute.hellbender.tools.walkers.sv.SVCluster done. Elapsed time: 0.02 minutes.
Runtime.totalMemory()=952107008
[May 27, 2025 at 3:21:08 PM GMT] org.broadinstitute.hellbender.tools.walkers.sv.SVCluster done. Elapsed time: 0.02 minutes.
Runtime.totalMemory()=952107008
[May 27, 2025 at 3:21:09 PM GMT] org.broadinstitute.hellbender.tools.walkers.sv.SVCluster done. Elapsed time: 0.02 minutes.
Runtime.totalMemory()=952107008
[May 27, 2025 at 3:21:10 PM GMT] org.broadinstitute.hellbender.tools.walkers.sv.SVCluster done. Elapsed time: 0.02 minutes.
Runtime.totalMemory()=952107008
[May 27, 2025 at 3:21:11 PM GMT] org.broadinstitute.hellbender.tools.walkers.sv.SVCluster done. Elapsed time: 0.02 minutes.
Runtime.totalMemory()=952107008
[May 27, 2025 at 3:21:12 PM GMT] org.broadinstitute.hellbender.tools.walkers.sv.SVCluster done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=952107008
[May 27, 2025 at 3:21:12 PM GMT] org.broadinstitute.hellbender.tools.walkers.sv.SVCluster done. Elapsed time: 0.01 minutes.
Runtime.totalMemory()=1098907648
[May 27, 2025 at 3:21:13 PM GMT] org.broadinstitute.hellbender.tools.walkers.sv.SVCluster done. Elapsed time: 0.01 minutes.
Runtime.totalMemory()=1098907648