Class org.broadinstitute.hellbender.tools.spark.PileupSparkIntegrationTest
Tests
| Test |
Duration |
Result |
| testFeaturesPileupHdfs[0](false) |
1.384s |
passed |
| testFeaturesPileupHdfs[1](true) |
1.068s |
passed |
| testFeaturesPileup[0](false) |
0.875s |
passed |
| testFeaturesPileup[1](true) |
0.546s |
passed |
| testInsertLengthPileup[0](false) |
0.480s |
passed |
| testInsertLengthPileup[1](true) |
0.359s |
passed |
| testSimplePileup[0](false) |
0.462s |
passed |
| testSimplePileup[1](true) |
0.355s |
passed |
| testVerbosePileup[0](false) |
0.446s |
passed |
| testVerbosePileup[1](true) |
0.335s |
passed |
Standard error
[May 27, 2025 at 2:56:41 PM UTC] org.broadinstitute.hellbender.tools.spark.PileupSpark done. Elapsed time: 0.01 minutes.
Runtime.totalMemory()=1153433600
[May 27, 2025 at 2:56:42 PM UTC] org.broadinstitute.hellbender.tools.spark.PileupSpark done. Elapsed time: 0.01 minutes.
Runtime.totalMemory()=1153433600
[May 27, 2025 at 2:56:43 PM UTC] org.broadinstitute.hellbender.tools.spark.PileupSpark done. Elapsed time: 0.01 minutes.
Runtime.totalMemory()=1153433600
14:56:43.697 ERROR DataNode - Command processor encountered interrupt and exit.
[May 27, 2025 at 2:56:44 PM UTC] org.broadinstitute.hellbender.tools.spark.PileupSpark done. Elapsed time: 0.01 minutes.
Runtime.totalMemory()=1153433600
14:56:44.764 ERROR DataNode - Command processor encountered interrupt and exit.
[May 27, 2025 at 2:56:45 PM UTC] org.broadinstitute.hellbender.tools.spark.PileupSpark done. Elapsed time: 0.01 minutes.
Runtime.totalMemory()=2013265920
[May 27, 2025 at 2:56:45 PM UTC] org.broadinstitute.hellbender.tools.spark.PileupSpark done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=2013265920
[May 27, 2025 at 2:56:46 PM UTC] org.broadinstitute.hellbender.tools.spark.PileupSpark done. Elapsed time: 0.01 minutes.
Runtime.totalMemory()=2013265920
[May 27, 2025 at 2:56:46 PM UTC] org.broadinstitute.hellbender.tools.spark.PileupSpark done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=2013265920
[May 27, 2025 at 2:56:46 PM UTC] org.broadinstitute.hellbender.tools.spark.PileupSpark done. Elapsed time: 0.01 minutes.
Runtime.totalMemory()=2013265920
[May 27, 2025 at 2:56:47 PM UTC] org.broadinstitute.hellbender.tools.spark.PileupSpark done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=2013265920