Class org.broadinstitute.hellbender.tools.walkers.sv.SVClusterIntegrationTest
Tests
| Test |
Duration |
Result |
| testAgainstSimpleImplementation |
1.600s |
passed |
| testAllosome |
0.584s |
passed |
| testCleanedVcf |
1.015s |
passed |
| testClusterMaxClique[0](true) |
1.241s |
passed |
| testClusterMaxClique[1](false) |
1.024s |
passed |
| testClusterSampleOverlap |
0.930s |
passed |
| testClusterSingleLinkage |
1.003s |
passed |
| testDefragmentation |
0.381s |
passed |
| testMergeHelper[0](true) |
0.528s |
passed |
| testMergeHelper[1](false) |
0.511s |
passed |
Standard error
[May 27, 2025 at 3:06:10 PM UTC] org.broadinstitute.hellbender.tools.walkers.sv.SVCluster done. Elapsed time: 0.02 minutes.
Runtime.totalMemory()=1052770304
[May 27, 2025 at 3:06:11 PM UTC] org.broadinstitute.hellbender.tools.walkers.sv.SVCluster done. Elapsed time: 0.01 minutes.
Runtime.totalMemory()=1052770304
[May 27, 2025 at 3:06:12 PM UTC] org.broadinstitute.hellbender.tools.walkers.sv.SVCluster done. Elapsed time: 0.02 minutes.
Runtime.totalMemory()=1052770304
[May 27, 2025 at 3:06:14 PM UTC] org.broadinstitute.hellbender.tools.walkers.sv.SVCluster done. Elapsed time: 0.02 minutes.
Runtime.totalMemory()=1157627904
[May 27, 2025 at 3:06:15 PM UTC] org.broadinstitute.hellbender.tools.walkers.sv.SVCluster done. Elapsed time: 0.02 minutes.
Runtime.totalMemory()=1157627904
[May 27, 2025 at 3:06:15 PM UTC] org.broadinstitute.hellbender.tools.walkers.sv.SVCluster done. Elapsed time: 0.01 minutes.
Runtime.totalMemory()=1157627904
[May 27, 2025 at 3:06:17 PM UTC] org.broadinstitute.hellbender.tools.walkers.sv.SVCluster done. Elapsed time: 0.02 minutes.
Runtime.totalMemory()=1157627904
[May 27, 2025 at 3:06:17 PM UTC] org.broadinstitute.hellbender.tools.walkers.sv.SVCluster done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1157627904
[May 27, 2025 at 3:06:17 PM UTC] org.broadinstitute.hellbender.tools.walkers.sv.SVCluster done. Elapsed time: 0.01 minutes.
Runtime.totalMemory()=1157627904
[May 27, 2025 at 3:06:18 PM UTC] org.broadinstitute.hellbender.tools.walkers.sv.SVCluster done. Elapsed time: 0.01 minutes.
Runtime.totalMemory()=1157627904