Class org.broadinstitute.hellbender.tools.CountVariantsIntegrationTest

all > org.broadinstitute.hellbender.tools > CountVariantsIntegrationTest
10

tests
0

failures
0

ignored
7.379s

duration
100%

successful

Tests

Test Duration Result
testCountVariantsWithOutputFile[0](src/test/resources/org/broadinstitute/hellbender/tools/count_variants.vcf, , 26) 0.098s passed
testCountVariantsWithOutputFile[1](src/test/resources/org/broadinstitute/hellbender/tools/count_variants.blockgz.gz, , 26) 0.101s passed
testCountVariantsWithOutputFile[2](src/test/resources/org/broadinstitute/hellbender/tools/count_variants_withSequenceDict.vcf, , 26) 0.110s passed
testCountVariantsWithOutputFile[3](src/test/resources/org/broadinstitute/hellbender/tools/count_variants_withSequenceDict.vcf, -L 1, 14) 0.098s passed
testCountVariantsWithOutputFile[4](/gatkCloneMountPoint/src/test/resources/large/dbsnp_138.b37.1.1-65M.vcf, , 1375319) 3.195s passed
testCountVariants[0](src/test/resources/org/broadinstitute/hellbender/tools/count_variants.vcf, , 26) 0.093s passed
testCountVariants[1](src/test/resources/org/broadinstitute/hellbender/tools/count_variants.blockgz.gz, , 26) 0.094s passed
testCountVariants[2](src/test/resources/org/broadinstitute/hellbender/tools/count_variants_withSequenceDict.vcf, , 26) 0.091s passed
testCountVariants[3](src/test/resources/org/broadinstitute/hellbender/tools/count_variants_withSequenceDict.vcf, -L 1, 14) 0.088s passed
testCountVariants[4](/gatkCloneMountPoint/src/test/resources/large/dbsnp_138.b37.1.1-65M.vcf, , 1375319) 3.411s passed

Standard error

[May 27, 2025 at 4:38:58 PM GMT] org.broadinstitute.hellbender.tools.walkers.CountVariants done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=524288000
[May 27, 2025 at 4:38:58 PM GMT] org.broadinstitute.hellbender.tools.walkers.CountVariants done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=524288000
[May 27, 2025 at 4:38:58 PM GMT] org.broadinstitute.hellbender.tools.walkers.CountVariants done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=524288000
[May 27, 2025 at 4:38:58 PM GMT] org.broadinstitute.hellbender.tools.walkers.CountVariants done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=524288000
[May 27, 2025 at 4:39:02 PM GMT] org.broadinstitute.hellbender.tools.walkers.CountVariants done. Elapsed time: 0.06 minutes.
Runtime.totalMemory()=524288000
[May 27, 2025 at 4:39:02 PM GMT] org.broadinstitute.hellbender.tools.walkers.CountVariants done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=524288000
[May 27, 2025 at 4:39:02 PM GMT] org.broadinstitute.hellbender.tools.walkers.CountVariants done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=524288000
[May 27, 2025 at 4:39:02 PM GMT] org.broadinstitute.hellbender.tools.walkers.CountVariants done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=524288000
[May 27, 2025 at 4:39:02 PM GMT] org.broadinstitute.hellbender.tools.walkers.CountVariants done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=524288000
[May 27, 2025 at 4:39:05 PM GMT] org.broadinstitute.hellbender.tools.walkers.CountVariants done. Elapsed time: 0.05 minutes.
Runtime.totalMemory()=524288000