Class org.broadinstitute.hellbender.tools.spark.CreateHadoopBamSplittingIndexIntegrationTest

all > org.broadinstitute.hellbender.tools.spark > CreateHadoopBamSplittingIndexIntegrationTest
10

tests
0

failures
0

ignored
0.897s

duration
100%

successful

Tests

Test Duration Result
testBothPathsProduceSameIndex 0.173s passed
testCantCreateBaiForUnsortedFile 0.080s passed
testCreateSplittingIndex[0](src/test/resources/org/broadinstitute/hellbender/tools/spark/CreateHadoopBamSplittingIndex/count_reads.bam) 0.079s passed
testCreateSplittingIndex[1](src/test/resources/org/broadinstitute/hellbender/tools/spark/CreateHadoopBamSplittingIndex/count_reads_sorted.bam) 0.081s passed
testCreateWithBaiCreatesBai 0.082s passed
testNegativeGranularity 0.078s passed
testUnindexableFilesFail[0](src/test/resources/org/broadinstitute/hellbender/tools/spark/CreateHadoopBamSplittingIndex/count_reads.cram) 0.079s passed
testUnindexableFilesFail[1](src/test/resources/org/broadinstitute/hellbender/tools/spark/CreateHadoopBamSplittingIndex/count_reads.sam) 0.080s passed
testUnspecifiedOutputProducesAdjacentIndex[0](src/test/resources/org/broadinstitute/hellbender/tools/spark/CreateHadoopBamSplittingIndex/count_reads.bam) 0.081s passed
testUnspecifiedOutputProducesAdjacentIndex[1](src/test/resources/org/broadinstitute/hellbender/tools/spark/CreateHadoopBamSplittingIndex/count_reads_sorted.bam) 0.084s passed

Standard error

[May 27, 2025 at 4:48:49 PM GMT] org.broadinstitute.hellbender.tools.spark.CreateHadoopBamSplittingIndex done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=926941184
[May 27, 2025 at 4:48:49 PM GMT] org.broadinstitute.hellbender.tools.spark.CreateHadoopBamSplittingIndex done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=926941184
[May 27, 2025 at 4:48:49 PM GMT] org.broadinstitute.hellbender.tools.spark.CreateHadoopBamSplittingIndex done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=926941184
[May 27, 2025 at 4:48:49 PM GMT] org.broadinstitute.hellbender.tools.spark.CreateHadoopBamSplittingIndex done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=926941184
[May 27, 2025 at 4:48:49 PM GMT] org.broadinstitute.hellbender.tools.spark.CreateHadoopBamSplittingIndex done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=926941184
[May 27, 2025 at 4:48:49 PM GMT] org.broadinstitute.hellbender.tools.spark.CreateHadoopBamSplittingIndex done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=926941184
[May 27, 2025 at 4:48:49 PM GMT] org.broadinstitute.hellbender.tools.spark.CreateHadoopBamSplittingIndex done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=926941184
[May 27, 2025 at 4:48:49 PM GMT] org.broadinstitute.hellbender.tools.spark.CreateHadoopBamSplittingIndex done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=926941184
[May 27, 2025 at 4:48:49 PM GMT] org.broadinstitute.hellbender.tools.spark.CreateHadoopBamSplittingIndex done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=926941184
[May 27, 2025 at 4:48:50 PM GMT] org.broadinstitute.hellbender.tools.spark.CreateHadoopBamSplittingIndex done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=926941184
[May 27, 2025 at 4:48:50 PM GMT] org.broadinstitute.hellbender.tools.spark.CreateHadoopBamSplittingIndex done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=926941184