Class org.broadinstitute.hellbender.tools.walkers.sv.SVClusterIntegrationTest
Tests
| Test |
Duration |
Result |
| testAgainstSimpleImplementation |
1.694s |
passed |
| testAllosome |
0.634s |
passed |
| testCleanedVcf |
1.024s |
passed |
| testClusterMaxClique[0](true) |
1.075s |
passed |
| testClusterMaxClique[1](false) |
1.076s |
passed |
| testClusterSampleOverlap |
0.891s |
passed |
| testClusterSingleLinkage |
1.024s |
passed |
| testDefragmentation |
0.445s |
passed |
| testMergeHelper[0](true) |
0.556s |
passed |
| testMergeHelper[1](false) |
0.562s |
passed |
Standard error
[May 27, 2025 at 4:58:54 PM GMT] org.broadinstitute.hellbender.tools.walkers.sv.SVCluster done. Elapsed time: 0.02 minutes.
Runtime.totalMemory()=1113587712
[May 27, 2025 at 4:58:55 PM GMT] org.broadinstitute.hellbender.tools.walkers.sv.SVCluster done. Elapsed time: 0.01 minutes.
Runtime.totalMemory()=1113587712
[May 27, 2025 at 4:58:56 PM GMT] org.broadinstitute.hellbender.tools.walkers.sv.SVCluster done. Elapsed time: 0.02 minutes.
Runtime.totalMemory()=1113587712
[May 27, 2025 at 4:58:57 PM GMT] org.broadinstitute.hellbender.tools.walkers.sv.SVCluster done. Elapsed time: 0.02 minutes.
Runtime.totalMemory()=1113587712
[May 27, 2025 at 4:58:58 PM GMT] org.broadinstitute.hellbender.tools.walkers.sv.SVCluster done. Elapsed time: 0.02 minutes.
Runtime.totalMemory()=1113587712
[May 27, 2025 at 4:58:59 PM GMT] org.broadinstitute.hellbender.tools.walkers.sv.SVCluster done. Elapsed time: 0.01 minutes.
Runtime.totalMemory()=1113587712
[May 27, 2025 at 4:59:00 PM GMT] org.broadinstitute.hellbender.tools.walkers.sv.SVCluster done. Elapsed time: 0.02 minutes.
Runtime.totalMemory()=1113587712
[May 27, 2025 at 4:59:01 PM GMT] org.broadinstitute.hellbender.tools.walkers.sv.SVCluster done. Elapsed time: 0.01 minutes.
Runtime.totalMemory()=1113587712
[May 27, 2025 at 4:59:01 PM GMT] org.broadinstitute.hellbender.tools.walkers.sv.SVCluster done. Elapsed time: 0.01 minutes.
Runtime.totalMemory()=1113587712
[May 27, 2025 at 4:59:02 PM GMT] org.broadinstitute.hellbender.tools.walkers.sv.SVCluster done. Elapsed time: 0.01 minutes.
Runtime.totalMemory()=1113587712