Class org.broadinstitute.hellbender.tools.walkers.annotator.VariantAnnotatorIntegrationTest
Tests
| Test |
Duration |
Result |
| addQdToGvsVcf |
0.128s |
passed |
| testAgainstMutect2 |
3.675s |
passed |
| testComp |
0.155s |
passed |
| testDBSNP |
0.085s |
passed |
| testDeNovo |
0.112s |
passed |
| testNoReads |
0.073s |
passed |
| testResource |
0.223s |
passed |
| testValidationReadsDontMatch |
0.069s |
passed |
Standard error
[May 27, 2025 at 4:38:12 PM UTC] org.broadinstitute.hellbender.tools.walkers.annotator.VariantAnnotator done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1281359872
[May 27, 2025 at 4:38:14 PM UTC] org.broadinstitute.hellbender.tools.walkers.mutect.Mutect2 done. Elapsed time: 0.03 minutes.
Runtime.totalMemory()=1281359872
[May 27, 2025 at 4:38:16 PM UTC] org.broadinstitute.hellbender.tools.walkers.mutect.Mutect2 done. Elapsed time: 0.02 minutes.
Runtime.totalMemory()=1281359872
[May 27, 2025 at 4:38:16 PM UTC] org.broadinstitute.hellbender.tools.walkers.annotator.VariantAnnotator done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1281359872
[May 27, 2025 at 4:38:16 PM UTC] org.broadinstitute.hellbender.tools.walkers.annotator.VariantAnnotator done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1281359872
[May 27, 2025 at 4:38:16 PM UTC] org.broadinstitute.hellbender.tools.walkers.annotator.VariantAnnotator done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1281359872
[May 27, 2025 at 4:38:16 PM UTC] org.broadinstitute.hellbender.tools.walkers.annotator.VariantAnnotator done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1281359872
[May 27, 2025 at 4:38:16 PM UTC] org.broadinstitute.hellbender.tools.walkers.annotator.VariantAnnotator done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1281359872
[May 27, 2025 at 4:38:16 PM UTC] org.broadinstitute.hellbender.tools.walkers.annotator.VariantAnnotator done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1281359872
[May 27, 2025 at 4:38:17 PM UTC] org.broadinstitute.hellbender.tools.walkers.annotator.VariantAnnotator done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1281359872
[May 27, 2025 at 4:38:17 PM UTC] org.broadinstitute.hellbender.tools.walkers.annotator.VariantAnnotator done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1281359872
[May 27, 2025 at 4:38:17 PM UTC] org.broadinstitute.hellbender.tools.walkers.annotator.VariantAnnotator done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1281359872
[May 27, 2025 at 4:38:17 PM UTC] org.broadinstitute.hellbender.tools.walkers.annotator.VariantAnnotator done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1281359872