Class org.broadinstitute.hellbender.tools.walkers.vqsr.ApplyVQSRIntegrationTest
Tests
| Test |
Duration |
Result |
| testApplyIndelRecalibration |
0.655s |
passed |
| testApplySNPRecalibration |
1.819s |
passed |
| testApplyVQSRAlleleSpecificINDELmode |
0.083s |
passed |
| testApplyVQSRAlleleSpecificINDELmodeGZIPIndex |
0.124s |
passed |
| testApplyVQSRAlleleSpecificSNPmode |
0.079s |
passed |
| testApplyVQSRSnpAndIndelTogether |
0.067s |
passed |
| testApplyVQSRSnpAndIndelTogetherExcludeFiltered |
0.068s |
passed |
Standard output
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[16:46:00] Executing test ApplyVQSRIntegrationTest:testApplyVQSRIndel
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[16:46:01] Executing test ApplyVQSRIntegrationTest:testApplyVQSRSNP
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[16:46:03] Executing test ApplyVQSRIntegrationTest:testApplyVQSRAlleleSpecificINDELmode
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[16:46:03] Executing test ApplyVQSRIntegrationTest:testApplyVQSRAlleleSpecificINDELmodeGZIP
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[16:46:03] Executing test ApplyVQSRIntegrationTest:testApplyVQSRAlleleSpecificSNPmode
--------------------------------------------------------------------------------
[16:46:03] Executing test ApplyVQSRIntegrationTest:testApplyVQSRSnpAndIndelTogether
Standard error
[May 27, 2025 at 4:46:01 PM UTC] org.broadinstitute.hellbender.tools.walkers.vqsr.ApplyVQSR done. Elapsed time: 0.01 minutes.
Runtime.totalMemory()=1140850688
[May 27, 2025 at 4:46:03 PM UTC] org.broadinstitute.hellbender.tools.walkers.vqsr.ApplyVQSR done. Elapsed time: 0.03 minutes.
Runtime.totalMemory()=1140850688
[May 27, 2025 at 4:46:03 PM UTC] org.broadinstitute.hellbender.tools.walkers.vqsr.ApplyVQSR done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1140850688
[May 27, 2025 at 4:46:03 PM UTC] org.broadinstitute.hellbender.tools.walkers.vqsr.ApplyVQSR done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1140850688
[May 27, 2025 at 4:46:03 PM UTC] org.broadinstitute.hellbender.tools.walkers.vqsr.ApplyVQSR done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1140850688
[May 27, 2025 at 4:46:03 PM UTC] org.broadinstitute.hellbender.tools.walkers.vqsr.ApplyVQSR done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1140850688
[May 27, 2025 at 4:46:03 PM UTC] org.broadinstitute.hellbender.tools.walkers.vqsr.ApplyVQSR done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1140850688