Class org.broadinstitute.hellbender.tools.spark.CreateHadoopBamSplittingIndexIntegrationTest

all > org.broadinstitute.hellbender.tools.spark > CreateHadoopBamSplittingIndexIntegrationTest
10

tests
0

failures
0

ignored
1.229s

duration
100%

successful

Tests

Test Duration Result
testBothPathsProduceSameIndex 0.229s passed
testCantCreateBaiForUnsortedFile 0.100s passed
testCreateSplittingIndex[0](src/test/resources/org/broadinstitute/hellbender/tools/spark/CreateHadoopBamSplittingIndex/count_reads.bam) 0.108s passed
testCreateSplittingIndex[1](src/test/resources/org/broadinstitute/hellbender/tools/spark/CreateHadoopBamSplittingIndex/count_reads_sorted.bam) 0.110s passed
testCreateWithBaiCreatesBai 0.122s passed
testNegativeGranularity 0.115s passed
testUnindexableFilesFail[0](src/test/resources/org/broadinstitute/hellbender/tools/spark/CreateHadoopBamSplittingIndex/count_reads.cram) 0.111s passed
testUnindexableFilesFail[1](src/test/resources/org/broadinstitute/hellbender/tools/spark/CreateHadoopBamSplittingIndex/count_reads.sam) 0.110s passed
testUnspecifiedOutputProducesAdjacentIndex[0](src/test/resources/org/broadinstitute/hellbender/tools/spark/CreateHadoopBamSplittingIndex/count_reads.bam) 0.113s passed
testUnspecifiedOutputProducesAdjacentIndex[1](src/test/resources/org/broadinstitute/hellbender/tools/spark/CreateHadoopBamSplittingIndex/count_reads_sorted.bam) 0.111s passed

Standard error

[May 27, 2025 at 6:30:35 PM GMT] org.broadinstitute.hellbender.tools.spark.CreateHadoopBamSplittingIndex done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=987758592
[May 27, 2025 at 6:30:35 PM GMT] org.broadinstitute.hellbender.tools.spark.CreateHadoopBamSplittingIndex done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=987758592
[May 27, 2025 at 6:30:35 PM GMT] org.broadinstitute.hellbender.tools.spark.CreateHadoopBamSplittingIndex done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=987758592
[May 27, 2025 at 6:30:35 PM GMT] org.broadinstitute.hellbender.tools.spark.CreateHadoopBamSplittingIndex done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=987758592
[May 27, 2025 at 6:30:35 PM GMT] org.broadinstitute.hellbender.tools.spark.CreateHadoopBamSplittingIndex done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=987758592
[May 27, 2025 at 6:30:35 PM GMT] org.broadinstitute.hellbender.tools.spark.CreateHadoopBamSplittingIndex done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=987758592
[May 27, 2025 at 6:30:35 PM GMT] org.broadinstitute.hellbender.tools.spark.CreateHadoopBamSplittingIndex done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=987758592
[May 27, 2025 at 6:30:35 PM GMT] org.broadinstitute.hellbender.tools.spark.CreateHadoopBamSplittingIndex done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=987758592
[May 27, 2025 at 6:30:35 PM GMT] org.broadinstitute.hellbender.tools.spark.CreateHadoopBamSplittingIndex done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=987758592
[May 27, 2025 at 6:30:36 PM GMT] org.broadinstitute.hellbender.tools.spark.CreateHadoopBamSplittingIndex done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=987758592
[May 27, 2025 at 6:30:36 PM GMT] org.broadinstitute.hellbender.tools.spark.CreateHadoopBamSplittingIndex done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=987758592