Class org.broadinstitute.hellbender.tools.walkers.fasta.FastaReferenceMakerIntegrationTest
Tests
| Test |
Duration |
Result |
| runMakeFastaTest[0]([1:10,000,100-10,000,500, 1:10,100,000-10,101,000, 1:10,900,000-10,900,001], src/test/resources/org/broadinstitute/hellbender/tools/walkers/fasta/FastaReferenceMaker/reference_only.fasta) |
0.119s |
passed |
| runMakeFastaTest[1]([1:10,000,100-10,000,200, 1:10,000,201-10,000,301], src/test/resources/org/broadinstitute/hellbender/tools/walkers/fasta/FastaReferenceMaker/reference_only_contiguous_same_contig.fasta) |
0.117s |
passed |
| runMakeFastaTest[2]([1:10,000,100-10,000,200, 2:10,000,201-10,000,301], src/test/resources/org/broadinstitute/hellbender/tools/walkers/fasta/FastaReferenceMaker/reference_only_contiguous_diff_contigs.fasta) |
0.111s |
passed |
| testBasePerLine[0](13) |
0.140s |
passed |
| testBasePerLine[1](60) |
0.120s |
passed |
| testBasePerLine[2](100) |
0.126s |
passed |
Standard error
[May 27, 2025 at 6:38:31 PM GMT] org.broadinstitute.hellbender.tools.walkers.fasta.FastaReferenceMaker done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1478492160
[May 27, 2025 at 6:38:31 PM GMT] org.broadinstitute.hellbender.tools.walkers.fasta.FastaReferenceMaker done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1478492160
[May 27, 2025 at 6:38:31 PM GMT] org.broadinstitute.hellbender.tools.walkers.fasta.FastaReferenceMaker done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1478492160
[May 27, 2025 at 6:38:31 PM GMT] org.broadinstitute.hellbender.tools.walkers.fasta.FastaReferenceMaker done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1478492160
[May 27, 2025 at 6:38:32 PM GMT] org.broadinstitute.hellbender.tools.walkers.fasta.FastaReferenceMaker done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1478492160
[May 27, 2025 at 6:38:32 PM GMT] org.broadinstitute.hellbender.tools.walkers.fasta.FastaReferenceMaker done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1478492160