Class org.broadinstitute.hellbender.tools.copynumber.plotting.PlotModeledSegmentsIntegrationTest
Tests
| Test |
Duration |
Result |
| testAllelicCountsOutOfDictionaryBounds |
0.068s |
passed |
| testAllelicCountsSampleNameMismatch |
0.068s |
passed |
| testDenoisedCopyRatiosOutOfDictionaryBounds |
0.068s |
passed |
| testDenoisedCopyRatiosSampleNameMismatch |
0.068s |
passed |
| testInGatkLiteDocker |
0.062s |
passed |
| testMinimumContigLength |
0.068s |
passed |
| testModeledSegmentsOutOfDictionaryBounds |
0.066s |
passed |
| testModeledSegmentsSampleNameMismatch |
0.070s |
passed |
| testModeledSegmentsWithWrongNumPointsAlleleFraction |
0.068s |
passed |
| testModeledSegmentsWithWrongNumPointsCopyRatio |
0.064s |
passed |
| testNonExistentAllelicCountsFile |
0.059s |
passed |
| testNonExistentDenoisedCopyRatiosFile |
0.055s |
passed |
| testNonExistentModeledSegmentsFile |
0.060s |
passed |
| testNonExistentSequenceDictionaryFile |
0.061s |
passed |
Standard error
[May 27, 2025 at 6:07:20 PM UTC] org.broadinstitute.hellbender.tools.copynumber.plotting.PlotModeledSegments done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1342177280
[May 27, 2025 at 6:07:21 PM UTC] org.broadinstitute.hellbender.tools.copynumber.plotting.PlotModeledSegments done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1342177280
[May 27, 2025 at 6:07:21 PM UTC] org.broadinstitute.hellbender.tools.copynumber.plotting.PlotModeledSegments done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1342177280
[May 27, 2025 at 6:07:21 PM UTC] org.broadinstitute.hellbender.tools.copynumber.plotting.PlotModeledSegments done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1342177280
[May 27, 2025 at 6:07:21 PM UTC] org.broadinstitute.hellbender.tools.copynumber.plotting.PlotModeledSegments done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1342177280
[May 27, 2025 at 6:07:21 PM UTC] org.broadinstitute.hellbender.tools.copynumber.plotting.PlotModeledSegments done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1342177280
[May 27, 2025 at 6:07:21 PM UTC] org.broadinstitute.hellbender.tools.copynumber.plotting.PlotModeledSegments done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1342177280
[May 27, 2025 at 6:07:21 PM UTC] org.broadinstitute.hellbender.tools.copynumber.plotting.PlotModeledSegments done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1342177280
[May 27, 2025 at 6:07:21 PM UTC] org.broadinstitute.hellbender.tools.copynumber.plotting.PlotModeledSegments done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1342177280
[May 27, 2025 at 6:07:21 PM UTC] org.broadinstitute.hellbender.tools.copynumber.plotting.PlotModeledSegments done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1342177280
[May 27, 2025 at 6:07:21 PM UTC] org.broadinstitute.hellbender.tools.copynumber.plotting.PlotModeledSegments done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1342177280
[May 27, 2025 at 6:07:21 PM UTC] org.broadinstitute.hellbender.tools.copynumber.plotting.PlotModeledSegments done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1342177280
[May 27, 2025 at 6:07:21 PM UTC] org.broadinstitute.hellbender.tools.copynumber.plotting.PlotModeledSegments done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1342177280
[May 27, 2025 at 6:07:21 PM UTC] org.broadinstitute.hellbender.tools.copynumber.plotting.PlotModeledSegments done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1342177280