Class org.broadinstitute.hellbender.tools.spark.sv.integration.SvDiscoverFromLocalAssemblyContigAlignmentsSparkIntegrationTest

all > org.broadinstitute.hellbender.tools.spark.sv.integration > SvDiscoverFromLocalAssemblyContigAlignmentsSparkIntegrationTest
2

tests
0

failures
0

ignored
5.349s

duration
100%

successful

Tests

Test Duration Result
testDiscoverVariantsRunnableLocal[0](org.broadinstitute.hellbender.tools.spark.sv.integration.SvDiscoverFromLocalAssemblyContigAlignmentsSparkIntegrationTest$TestArgs@637ee816, /home/runner/work/gatk/gatk/src/test/resources/large//sv/SvDiscoverFromLocalAssemblyContigAlignmentsSparkIntegrationTest_NonComplex.vcf, /home/runner/work/gatk/gatk/src/test/resources/large//sv/SvDiscoverFromLocalAssemblyContigAlignmentsSparkIntegrationTest_Complex.vcf, /home/runner/work/gatk/gatk/src/test/resources/large//sv/SvDiscoverFromLocalAssemblyContigAlignmentsSparkIntegrationTest_cpx_reinterpreted_simple_1_seg.vcf, /home/runner/work/gatk/gatk/src/test/resources/large//sv/SvDiscoverFromLocalAssemblyContigAlignmentsSparkIntegrationTest_cpx_reinterpreted_simple_multi_seg.vcf, /home/runner/work/gatk/gatk/src/test/resources/large//sv/SvDiscoverFromLocalAssemblyContigAlignmentsSparkIntegrationTest_merged_simple.vcf) 2.814s passed
testDiscoverVariantsRunnableLocal[1](org.broadinstitute.hellbender.tools.spark.sv.integration.SvDiscoverFromLocalAssemblyContigAlignmentsSparkIntegrationTest$TestArgs@78984b7e, /home/runner/work/gatk/gatk/src/test/resources/large//sv/forBND_SvDiscoverFromLocalAssemblyContigAlignmentsSparkIntegrationTest_NonComplex.vcf, null, null, null, /home/runner/work/gatk/gatk/src/test/resources/large//sv/forBND_SvDiscoverFromLocalAssemblyContigAlignmentsSparkIntegrationTest_merged_simple.vcf) 2.535s passed

Standard error

[May 27, 2025 at 6:16:48 PM UTC] org.broadinstitute.hellbender.tools.spark.sv.discovery.SvDiscoverFromLocalAssemblyContigAlignmentsSpark done. Elapsed time: 0.04 minutes.
Runtime.totalMemory()=897581056
[May 27, 2025 at 6:16:50 PM UTC] org.broadinstitute.hellbender.tools.spark.sv.discovery.SvDiscoverFromLocalAssemblyContigAlignmentsSpark done. Elapsed time: 0.04 minutes.
Runtime.totalMemory()=874512384