Class org.broadinstitute.hellbender.tools.walkers.annotator.VariantAnnotatorIntegrationTest
Tests
| Test |
Duration |
Result |
| addQdToGvsVcf |
0.154s |
passed |
| testAgainstMutect2 |
3.066s |
passed |
| testComp |
0.222s |
passed |
| testDBSNP |
0.107s |
passed |
| testDeNovo |
0.142s |
passed |
| testNoReads |
0.110s |
passed |
| testResource |
0.309s |
passed |
| testValidationReadsDontMatch |
0.096s |
passed |
Standard error
[June 2, 2025 at 2:38:25 PM GMT] org.broadinstitute.hellbender.tools.walkers.annotator.VariantAnnotator done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1327497216
[June 2, 2025 at 2:38:26 PM GMT] org.broadinstitute.hellbender.tools.walkers.mutect.Mutect2 done. Elapsed time: 0.03 minutes.
Runtime.totalMemory()=1327497216
[June 2, 2025 at 2:38:27 PM GMT] org.broadinstitute.hellbender.tools.walkers.mutect.Mutect2 done. Elapsed time: 0.02 minutes.
Runtime.totalMemory()=1327497216
[June 2, 2025 at 2:38:28 PM GMT] org.broadinstitute.hellbender.tools.walkers.annotator.VariantAnnotator done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1327497216
[June 2, 2025 at 2:38:28 PM GMT] org.broadinstitute.hellbender.tools.walkers.annotator.VariantAnnotator done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1327497216
[June 2, 2025 at 2:38:28 PM GMT] org.broadinstitute.hellbender.tools.walkers.annotator.VariantAnnotator done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1327497216
[June 2, 2025 at 2:38:28 PM GMT] org.broadinstitute.hellbender.tools.walkers.annotator.VariantAnnotator done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1327497216
[June 2, 2025 at 2:38:28 PM GMT] org.broadinstitute.hellbender.tools.walkers.annotator.VariantAnnotator done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1327497216
[June 2, 2025 at 2:38:28 PM GMT] org.broadinstitute.hellbender.tools.walkers.annotator.VariantAnnotator done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1327497216
[June 2, 2025 at 2:38:28 PM GMT] org.broadinstitute.hellbender.tools.walkers.annotator.VariantAnnotator done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1327497216
[June 2, 2025 at 2:38:28 PM GMT] org.broadinstitute.hellbender.tools.walkers.annotator.VariantAnnotator done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1327497216
[June 2, 2025 at 2:38:28 PM GMT] org.broadinstitute.hellbender.tools.walkers.annotator.VariantAnnotator done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1327497216
[June 2, 2025 at 2:38:29 PM GMT] org.broadinstitute.hellbender.tools.walkers.annotator.VariantAnnotator done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1327497216