Class org.broadinstitute.hellbender.tools.walkers.sv.SVClusterIntegrationTest
Tests
| Test |
Duration |
Result |
| testAgainstSimpleImplementation |
1.614s |
passed |
| testAllosome |
0.664s |
passed |
| testCleanedVcf |
1.081s |
passed |
| testClusterMaxClique[0](true) |
1.073s |
passed |
| testClusterMaxClique[1](false) |
1.115s |
passed |
| testClusterSampleOverlap |
0.900s |
passed |
| testClusterSingleLinkage |
1.050s |
passed |
| testDefragmentation |
0.523s |
passed |
| testMergeHelper[0](true) |
0.658s |
passed |
| testMergeHelper[1](false) |
0.560s |
passed |
Standard error
[June 2, 2025 at 2:44:46 PM GMT] org.broadinstitute.hellbender.tools.walkers.sv.SVCluster done. Elapsed time: 0.02 minutes.
Runtime.totalMemory()=1048576000
[June 2, 2025 at 2:44:48 PM GMT] org.broadinstitute.hellbender.tools.walkers.sv.SVCluster done. Elapsed time: 0.01 minutes.
Runtime.totalMemory()=1048576000
[June 2, 2025 at 2:44:49 PM GMT] org.broadinstitute.hellbender.tools.walkers.sv.SVCluster done. Elapsed time: 0.02 minutes.
Runtime.totalMemory()=1048576000
[June 2, 2025 at 2:44:50 PM GMT] org.broadinstitute.hellbender.tools.walkers.sv.SVCluster done. Elapsed time: 0.02 minutes.
Runtime.totalMemory()=1048576000
[June 2, 2025 at 2:44:51 PM GMT] org.broadinstitute.hellbender.tools.walkers.sv.SVCluster done. Elapsed time: 0.02 minutes.
Runtime.totalMemory()=1048576000
[June 2, 2025 at 2:44:52 PM GMT] org.broadinstitute.hellbender.tools.walkers.sv.SVCluster done. Elapsed time: 0.01 minutes.
Runtime.totalMemory()=1048576000
[June 2, 2025 at 2:44:53 PM GMT] org.broadinstitute.hellbender.tools.walkers.sv.SVCluster done. Elapsed time: 0.02 minutes.
Runtime.totalMemory()=1048576000
[June 2, 2025 at 2:44:53 PM GMT] org.broadinstitute.hellbender.tools.walkers.sv.SVCluster done. Elapsed time: 0.01 minutes.
Runtime.totalMemory()=1048576000
[June 2, 2025 at 2:44:54 PM GMT] org.broadinstitute.hellbender.tools.walkers.sv.SVCluster done. Elapsed time: 0.01 minutes.
Runtime.totalMemory()=1048576000
[June 2, 2025 at 2:44:55 PM GMT] org.broadinstitute.hellbender.tools.walkers.sv.SVCluster done. Elapsed time: 0.01 minutes.
Runtime.totalMemory()=1048576000