Class org.broadinstitute.hellbender.tools.spark.CreateHadoopBamSplittingIndexIntegrationTest

all > org.broadinstitute.hellbender.tools.spark > CreateHadoopBamSplittingIndexIntegrationTest
10

tests
0

failures
0

ignored
0.750s

duration
100%

successful

Tests

Test Duration Result
testBothPathsProduceSameIndex 0.138s passed
testCantCreateBaiForUnsortedFile 0.073s passed
testCreateSplittingIndex[0](src/test/resources/org/broadinstitute/hellbender/tools/spark/CreateHadoopBamSplittingIndex/count_reads.bam) 0.065s passed
testCreateSplittingIndex[1](src/test/resources/org/broadinstitute/hellbender/tools/spark/CreateHadoopBamSplittingIndex/count_reads_sorted.bam) 0.062s passed
testCreateWithBaiCreatesBai 0.063s passed
testNegativeGranularity 0.069s passed
testUnindexableFilesFail[0](src/test/resources/org/broadinstitute/hellbender/tools/spark/CreateHadoopBamSplittingIndex/count_reads.cram) 0.068s passed
testUnindexableFilesFail[1](src/test/resources/org/broadinstitute/hellbender/tools/spark/CreateHadoopBamSplittingIndex/count_reads.sam) 0.068s passed
testUnspecifiedOutputProducesAdjacentIndex[0](src/test/resources/org/broadinstitute/hellbender/tools/spark/CreateHadoopBamSplittingIndex/count_reads.bam) 0.073s passed
testUnspecifiedOutputProducesAdjacentIndex[1](src/test/resources/org/broadinstitute/hellbender/tools/spark/CreateHadoopBamSplittingIndex/count_reads_sorted.bam) 0.071s passed

Standard error

[June 2, 2025 at 2:20:38 PM UTC] org.broadinstitute.hellbender.tools.spark.CreateHadoopBamSplittingIndex done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1010827264
[June 2, 2025 at 2:20:38 PM UTC] org.broadinstitute.hellbender.tools.spark.CreateHadoopBamSplittingIndex done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1010827264
[June 2, 2025 at 2:20:38 PM UTC] org.broadinstitute.hellbender.tools.spark.CreateHadoopBamSplittingIndex done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1010827264
[June 2, 2025 at 2:20:38 PM UTC] org.broadinstitute.hellbender.tools.spark.CreateHadoopBamSplittingIndex done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1010827264
[June 2, 2025 at 2:20:38 PM UTC] org.broadinstitute.hellbender.tools.spark.CreateHadoopBamSplittingIndex done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1010827264
[June 2, 2025 at 2:20:38 PM UTC] org.broadinstitute.hellbender.tools.spark.CreateHadoopBamSplittingIndex done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1010827264
[June 2, 2025 at 2:20:38 PM UTC] org.broadinstitute.hellbender.tools.spark.CreateHadoopBamSplittingIndex done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1010827264
[June 2, 2025 at 2:20:38 PM UTC] org.broadinstitute.hellbender.tools.spark.CreateHadoopBamSplittingIndex done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1010827264
[June 2, 2025 at 2:20:39 PM UTC] org.broadinstitute.hellbender.tools.spark.CreateHadoopBamSplittingIndex done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1010827264
[June 2, 2025 at 2:20:39 PM UTC] org.broadinstitute.hellbender.tools.spark.CreateHadoopBamSplittingIndex done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1010827264
[June 2, 2025 at 2:20:39 PM UTC] org.broadinstitute.hellbender.tools.spark.CreateHadoopBamSplittingIndex done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1010827264