Class org.broadinstitute.hellbender.tools.spark.PileupSparkIntegrationTest
Tests
| Test |
Duration |
Result |
| testFeaturesPileupHdfs[0](false) |
1.442s |
passed |
| testFeaturesPileupHdfs[1](true) |
1.964s |
passed |
| testFeaturesPileup[0](false) |
0.837s |
passed |
| testFeaturesPileup[1](true) |
0.497s |
passed |
| testInsertLengthPileup[0](false) |
0.449s |
passed |
| testInsertLengthPileup[1](true) |
0.356s |
passed |
| testSimplePileup[0](false) |
0.435s |
passed |
| testSimplePileup[1](true) |
0.356s |
passed |
| testVerbosePileup[0](false) |
0.431s |
passed |
| testVerbosePileup[1](true) |
0.331s |
passed |
Standard error
[June 2, 2025 at 2:20:40 PM UTC] org.broadinstitute.hellbender.tools.spark.PileupSpark done. Elapsed time: 0.01 minutes.
Runtime.totalMemory()=1010827264
[June 2, 2025 at 2:20:40 PM UTC] org.broadinstitute.hellbender.tools.spark.PileupSpark done. Elapsed time: 0.01 minutes.
Runtime.totalMemory()=1010827264
[June 2, 2025 at 2:20:41 PM UTC] org.broadinstitute.hellbender.tools.spark.PileupSpark done. Elapsed time: 0.01 minutes.
Runtime.totalMemory()=1010827264
14:20:41.928 ERROR DataNode - Command processor encountered interrupt and exit.
[June 2, 2025 at 2:20:43 PM UTC] org.broadinstitute.hellbender.tools.spark.PileupSpark done. Elapsed time: 0.01 minutes.
Runtime.totalMemory()=952107008
14:20:43.895 ERROR DataNode - Command processor encountered interrupt and exit.
[June 2, 2025 at 2:20:44 PM UTC] org.broadinstitute.hellbender.tools.spark.PileupSpark done. Elapsed time: 0.01 minutes.
Runtime.totalMemory()=952107008
[June 2, 2025 at 2:20:44 PM UTC] org.broadinstitute.hellbender.tools.spark.PileupSpark done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=952107008
[June 2, 2025 at 2:20:45 PM UTC] org.broadinstitute.hellbender.tools.spark.PileupSpark done. Elapsed time: 0.01 minutes.
Runtime.totalMemory()=952107008
[June 2, 2025 at 2:20:45 PM UTC] org.broadinstitute.hellbender.tools.spark.PileupSpark done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=952107008
[June 2, 2025 at 2:20:45 PM UTC] org.broadinstitute.hellbender.tools.spark.PileupSpark done. Elapsed time: 0.01 minutes.
Runtime.totalMemory()=952107008
[June 2, 2025 at 2:20:46 PM UTC] org.broadinstitute.hellbender.tools.spark.PileupSpark done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=952107008