Standard error
21:17:52.021 INFO TestEmitUncoveredLociTool - ------------------------------------------------------------
21:17:52.021 INFO TestEmitUncoveredLociTool - The Genome Analysis Toolkit (GATK) v4.6.1.0-11-g40db79c-SNAPSHOT
21:17:52.021 INFO TestEmitUncoveredLociTool - For support and documentation go to https://software.broadinstitute.org/gatk/
21:17:52.022 INFO TestEmitUncoveredLociTool - Executing as root@947a58c13613 on Linux v6.8.0-1020-azure amd64
21:17:52.022 INFO TestEmitUncoveredLociTool - Java runtime: OpenJDK 64-Bit Server VM v17.0.12+7-Ubuntu-1ubuntu222.04
21:17:52.022 INFO TestEmitUncoveredLociTool - Start Date/Time: February 10, 2025 at 9:17:52 PM GMT
21:17:52.022 INFO TestEmitUncoveredLociTool - ------------------------------------------------------------
21:17:52.022 INFO TestEmitUncoveredLociTool - ------------------------------------------------------------
21:17:52.022 INFO TestEmitUncoveredLociTool - HTSJDK Defaults.COMPRESSION_LEVEL : 2
21:17:52.022 INFO TestEmitUncoveredLociTool - HTSJDK Defaults.USE_ASYNC_IO_READ_FOR_SAMTOOLS : false
21:17:52.022 INFO TestEmitUncoveredLociTool - HTSJDK Defaults.USE_ASYNC_IO_WRITE_FOR_SAMTOOLS : true
21:17:52.022 INFO TestEmitUncoveredLociTool - HTSJDK Defaults.USE_ASYNC_IO_WRITE_FOR_TRIBBLE : false
21:17:52.022 INFO TestEmitUncoveredLociTool - Deflater: IntelDeflater
21:17:52.022 INFO TestEmitUncoveredLociTool - Inflater: IntelInflater
21:17:52.022 INFO TestEmitUncoveredLociTool - GCS max retries/reopens: 20
21:17:52.022 INFO TestEmitUncoveredLociTool - Requester pays: disabled
21:17:52.022 INFO TestEmitUncoveredLociTool - Initializing engine
21:17:52.033 INFO IntervalArgumentCollection - Processing 10 bp from intervals
21:17:52.033 INFO TestEmitUncoveredLociTool - Done initializing engine
21:17:52.033 INFO ProgressMeter - Starting traversal
21:17:52.033 INFO ProgressMeter - Current Locus Elapsed Minutes Loci Processed Loci/Minute
21:17:52.038 INFO TestEmitUncoveredLociTool - 0 read(s) filtered by: WellformedReadFilter
0 read(s) filtered by: MappedReadFilter
0 total reads filtered out of 5 reads processed
21:17:52.038 INFO ProgressMeter - unmapped 0.0 10 150000.0
21:17:52.038 INFO ProgressMeter - Traversal complete. Processed 10 total loci in 0.0 minutes.
21:17:52.038 INFO TestEmitUncoveredLociTool - Shutting down engine
[February 10, 2025 at 9:17:52 PM GMT] org.broadinstitute.hellbender.engine.LocusWalkerUnitTest$TestEmitUncoveredLociTool done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=849346560
21:17:52.066 INFO TestTransformedLocusWalker - ------------------------------------------------------------
21:17:52.066 INFO TestTransformedLocusWalker - The Genome Analysis Toolkit (GATK) v4.6.1.0-11-g40db79c-SNAPSHOT
21:17:52.066 INFO TestTransformedLocusWalker - For support and documentation go to https://software.broadinstitute.org/gatk/
21:17:52.066 INFO TestTransformedLocusWalker - Executing as root@947a58c13613 on Linux v6.8.0-1020-azure amd64
21:17:52.066 INFO TestTransformedLocusWalker - Java runtime: OpenJDK 64-Bit Server VM v17.0.12+7-Ubuntu-1ubuntu222.04
21:17:52.066 INFO TestTransformedLocusWalker - Start Date/Time: February 10, 2025 at 9:17:52 PM GMT
21:17:52.066 INFO TestTransformedLocusWalker - ------------------------------------------------------------
21:17:52.066 INFO TestTransformedLocusWalker - ------------------------------------------------------------
21:17:52.066 INFO TestTransformedLocusWalker - HTSJDK Defaults.COMPRESSION_LEVEL : 2
21:17:52.066 INFO TestTransformedLocusWalker - HTSJDK Defaults.USE_ASYNC_IO_READ_FOR_SAMTOOLS : false
21:17:52.066 INFO TestTransformedLocusWalker - HTSJDK Defaults.USE_ASYNC_IO_WRITE_FOR_SAMTOOLS : true
21:17:52.066 INFO TestTransformedLocusWalker - HTSJDK Defaults.USE_ASYNC_IO_WRITE_FOR_TRIBBLE : false
21:17:52.066 INFO TestTransformedLocusWalker - Deflater: IntelDeflater
21:17:52.066 INFO TestTransformedLocusWalker - Inflater: IntelInflater
21:17:52.066 INFO TestTransformedLocusWalker - GCS max retries/reopens: 20
21:17:52.066 INFO TestTransformedLocusWalker - Requester pays: disabled
21:17:52.066 INFO TestTransformedLocusWalker - Initializing engine
21:17:52.071 INFO IntervalArgumentCollection - Processing 1 bp from intervals
21:17:52.071 INFO TestTransformedLocusWalker - Done initializing engine
21:17:52.071 INFO ProgressMeter - Starting traversal
21:17:52.071 INFO ProgressMeter - Current Locus Elapsed Minutes Loci Processed Loci/Minute
21:17:52.073 INFO TestTransformedLocusWalker - 0 read(s) filtered by:
21:17:52.073 INFO ProgressMeter - unmapped 0.0 1 30000.0
21:17:52.073 INFO ProgressMeter - Traversal complete. Processed 1 total loci in 0.0 minutes.
21:17:52.073 INFO TestTransformedLocusWalker - Shutting down engine
[February 10, 2025 at 9:17:52 PM GMT] org.broadinstitute.hellbender.engine.LocusWalkerUnitTest$TestTransformedLocusWalker done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=849346560