Class org.broadinstitute.hellbender.engine.MultiplePassVariantWalkerUnitTest

21:17:52.748 INFO  DummyMultiplePassVariantWalker - ------------------------------------------------------------
21:17:52.748 INFO  DummyMultiplePassVariantWalker - The Genome Analysis Toolkit (GATK) v4.6.1.0-11-g40db79c-SNAPSHOT
21:17:52.748 INFO  DummyMultiplePassVariantWalker - For support and documentation go to https://software.broadinstitute.org/gatk/
21:17:52.748 INFO  DummyMultiplePassVariantWalker - Executing as root@947a58c13613 on Linux v6.8.0-1020-azure amd64
21:17:52.748 INFO  DummyMultiplePassVariantWalker - Java runtime: OpenJDK 64-Bit Server VM v17.0.12+7-Ubuntu-1ubuntu222.04
21:17:52.748 INFO  DummyMultiplePassVariantWalker - Start Date/Time: February 10, 2025 at 9:17:52 PM GMT
21:17:52.748 INFO  DummyMultiplePassVariantWalker - ------------------------------------------------------------
21:17:52.748 INFO  DummyMultiplePassVariantWalker - ------------------------------------------------------------
21:17:52.748 INFO  DummyMultiplePassVariantWalker - HTSJDK Defaults.COMPRESSION_LEVEL : 2
21:17:52.748 INFO  DummyMultiplePassVariantWalker - HTSJDK Defaults.USE_ASYNC_IO_READ_FOR_SAMTOOLS : false
21:17:52.748 INFO  DummyMultiplePassVariantWalker - HTSJDK Defaults.USE_ASYNC_IO_WRITE_FOR_SAMTOOLS : true
21:17:52.748 INFO  DummyMultiplePassVariantWalker - HTSJDK Defaults.USE_ASYNC_IO_WRITE_FOR_TRIBBLE : false
21:17:52.748 INFO  DummyMultiplePassVariantWalker - Deflater: IntelDeflater
21:17:52.748 INFO  DummyMultiplePassVariantWalker - Inflater: IntelInflater
21:17:52.748 INFO  DummyMultiplePassVariantWalker - GCS max retries/reopens: 20
21:17:52.748 INFO  DummyMultiplePassVariantWalker - Requester pays: disabled
21:17:52.748 INFO  DummyMultiplePassVariantWalker - Initializing engine
21:17:52.749 INFO  FeatureManager - Using codec VCFCodec to read file file:///gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/walkers/variantutils/VariantsToTable/multiallelic.vcf
21:17:52.751 WARN  IndexUtils - Feature file "file:///gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/walkers/variantutils/VariantsToTable/multiallelic.vcf" appears to contain no sequence dictionary. Attempting to retrieve a sequence dictionary from the associated index file
21:17:52.751 WARN  IndexUtils - Feature file "file:///gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/walkers/variantutils/VariantsToTable/multiallelic.vcf" appears to contain no sequence dictionary. Attempting to retrieve a sequence dictionary from the associated index file
21:17:52.751 WARN  IndexUtils - Feature file "file:///gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/walkers/variantutils/VariantsToTable/multiallelic.vcf" appears to contain no sequence dictionary. Attempting to retrieve a sequence dictionary from the associated index file
21:17:52.752 INFO  DummyMultiplePassVariantWalker - Done initializing engine
21:17:52.752 INFO  ProgressMeter - Starting traversal
21:17:52.752 INFO  ProgressMeter -        Current Locus  Elapsed Minutes    Variants Processed  Variants/Minute
21:17:52.752 INFO  DummyMultiplePassVariantWalker - Starting pass 0 through the variants
21:17:52.754 INFO  DummyMultiplePassVariantWalker - Finished pass 0 through the variants
21:17:52.754 INFO  DummyMultiplePassVariantWalker - Starting pass 1 through the variants
21:17:52.755 INFO  DummyMultiplePassVariantWalker - Finished pass 1 through the variants
21:17:52.755 INFO  DummyMultiplePassVariantWalker - No variants filtered by: AllowAllVariantsVariantFilter
21:17:52.755 INFO  DummyMultiplePassVariantWalker - 0 read(s) filtered by: AllowAllReadsReadFilter 

21:17:52.755 INFO  ProgressMeter -             unmapped              0.0                   104        2080000.0
21:17:52.755 INFO  ProgressMeter - Traversal complete. Processed 104 total variants in 0.0 minutes.
21:17:52.755 INFO  DummyMultiplePassVariantWalker - Shutting down engine
[February 10, 2025 at 9:17:52 PM GMT] org.broadinstitute.hellbender.engine.MultiplePassVariantWalkerUnitTest$DummyMultiplePassVariantWalker done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=849346560