Class org.broadinstitute.hellbender.engine.ReadWalkerUnitTest

1

tests

0

failures

0

ignored

0.023s

duration

100%

successful

Tests

Test Duration Result
testTransformReads 0.023s passed

Standard error

21:17:52.787 INFO  TestTransformedReadWalker - ------------------------------------------------------------
21:17:52.787 INFO  TestTransformedReadWalker - The Genome Analysis Toolkit (GATK) v4.6.1.0-11-g40db79c-SNAPSHOT
21:17:52.787 INFO  TestTransformedReadWalker - For support and documentation go to https://software.broadinstitute.org/gatk/
21:17:52.787 INFO  TestTransformedReadWalker - Executing as root@947a58c13613 on Linux v6.8.0-1020-azure amd64
21:17:52.787 INFO  TestTransformedReadWalker - Java runtime: OpenJDK 64-Bit Server VM v17.0.12+7-Ubuntu-1ubuntu222.04
21:17:52.787 INFO  TestTransformedReadWalker - Start Date/Time: February 10, 2025 at 9:17:52 PM GMT
21:17:52.787 INFO  TestTransformedReadWalker - ------------------------------------------------------------
21:17:52.787 INFO  TestTransformedReadWalker - ------------------------------------------------------------
21:17:52.787 INFO  TestTransformedReadWalker - HTSJDK Defaults.COMPRESSION_LEVEL : 2
21:17:52.787 INFO  TestTransformedReadWalker - HTSJDK Defaults.USE_ASYNC_IO_READ_FOR_SAMTOOLS : false
21:17:52.787 INFO  TestTransformedReadWalker - HTSJDK Defaults.USE_ASYNC_IO_WRITE_FOR_SAMTOOLS : true
21:17:52.787 INFO  TestTransformedReadWalker - HTSJDK Defaults.USE_ASYNC_IO_WRITE_FOR_TRIBBLE : false
21:17:52.787 INFO  TestTransformedReadWalker - Deflater: IntelDeflater
21:17:52.787 INFO  TestTransformedReadWalker - Inflater: IntelInflater
21:17:52.787 INFO  TestTransformedReadWalker - GCS max retries/reopens: 20
21:17:52.787 INFO  TestTransformedReadWalker - Requester pays: disabled
21:17:52.787 INFO  TestTransformedReadWalker - Initializing engine
21:17:52.791 INFO  IntervalArgumentCollection - Processing 1 bp from intervals
21:17:52.791 INFO  TestTransformedReadWalker - Done initializing engine
21:17:52.791 INFO  ProgressMeter - Starting traversal
21:17:52.791 INFO  ProgressMeter -        Current Locus  Elapsed Minutes       Reads Processed     Reads/Minute
21:17:52.792 INFO  TestTransformedReadWalker - 0 read(s) filtered by:  

21:17:52.793 INFO  ProgressMeter -             unmapped              0.0                     5         150000.0
21:17:52.793 INFO  ProgressMeter - Traversal complete. Processed 5 total reads in 0.0 minutes.
21:17:52.793 INFO  TestTransformedReadWalker - Shutting down engine
[February 10, 2025 at 9:17:52 PM GMT] org.broadinstitute.hellbender.engine.ReadWalkerUnitTest$TestTransformedReadWalker done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=849346560