Test |
Duration |
Result |
testCopyConstructor[0](1:11210-11220, 1:2650-2650, 0, 0) |
0s |
passed |
testCopyConstructor[1](1:11210-11220, 1:2650-2650, 3, 5) |
0s |
passed |
testCopyConstructor[2](1:11210-11220, 1:2640-2650, 0, 0) |
0s |
passed |
testCopyConstructor[3](1:11210-11220, 1:2640-2650, 3, 5) |
0s |
passed |
testCopyConstructor[4](1:11210-11220, 2:2650-2650, 3, 5) |
0s |
passed |
testCopyConstructor[5](1:11210-11220, 2:2650-2650, 0, 0) |
0s |
passed |
testCopyConstructor[6](1:11210-11220, 2:2650-2660, 3, 5) |
0s |
passed |
testCopyConstructor[7](1:11210-11220, 2:2650-2660, 0, 0) |
0s |
passed |
testDynamicallyChangingWindow |
0.001s |
passed |
testEmptyReferenceContext[0](org.broadinstitute.hellbender.engine.ReferenceContext@a57734e) |
0s |
passed |
testEmptyReferenceContext[1](org.broadinstitute.hellbender.engine.ReferenceContext@43aae476) |
0s |
passed |
testEmptyReferenceContext[2](org.broadinstitute.hellbender.engine.ReferenceContext@6f2f9ba4) |
0s |
passed |
testEmptyReferenceContext[3](org.broadinstitute.hellbender.engine.ReferenceContext@4be4680b) |
0s |
passed |
testGetBasesStaticWindow |
0.001s |
passed |
testGetKmerAround[0](1, 11211, 1, CGG) |
0.001s |
passed |
testGetKmerAround[1](1, 11219, 1, TGC) |
0.001s |
passed |
testGetKmerAround[2](1, 11217, 2, CTGTG) |
0s |
passed |
testIntervalNotInWindow |
0.001s |
passed |
testInvalidWindowHandlingAtConstruction[0](-1, 1) |
0.001s |
passed |
testInvalidWindowHandlingAtConstruction[1](1, -1) |
0s |
passed |
testInvalidWindowHandlingAtConstruction[2](-1, -1) |
0.001s |
passed |
testInvalidWindowHandlingPostConstruction[0](-1, 1) |
0s |
passed |
testInvalidWindowHandlingPostConstruction[1](1, -1) |
0.001s |
passed |
testInvalidWindowHandlingPostConstruction[2](-1, -1) |
0s |
passed |
testNullIntervalAndNonNullWindow |
0s |
passed |
testWindowedContextUsingIntervalObjects[0](1:1-3, 5, 5, 1:1-8, NNNNNNNN) |
0s |
passed |
testWindowedContextUsingIntervalObjects[1](1:11041-11045, 5, 5, 1:11036-11050, CAGGAGCAAAGTCGC) |
0.001s |
passed |
testWindowedContextUsingIntervalObjects[2](1:11210-11220, 3, 0, 1:11207-11220, TCACGGTGCTGTGC) |
0s |
passed |
testWindowedContextUsingIntervalObjects[3](2:9995-10005, 0, 3, 2:9995-10008, NNNNNNCGTATCCC) |
0.001s |
passed |
testWindowedContextUsingIntervalObjects[4](2:10005-10084, 3, 8, 2:10002-10092, GTATCCCACACACCACACCCACACACCACACCCACACACACCCACACCCACACCCACACACACCACACCCACACACCACACCCACACCCAC) |
0s |
passed |
testWindowedContextUsingIntervalObjects[5](2:15995-16000, 2, 5, 2:15993-16000, TGTGTCAG) |
0.001s |
passed |
testWindowedContextUsingIntervalObjects_nullWindow |
0s |
passed |
testWindowedContext[0](1:1-3, 5, 5, 1:1-8, NNNNNNNN) |
0.001s |
passed |
testWindowedContext[1](1:11041-11045, 5, 5, 1:11036-11050, CAGGAGCAAAGTCGC) |
0s |
passed |
testWindowedContext[2](1:11210-11220, 3, 0, 1:11207-11220, TCACGGTGCTGTGC) |
0s |
passed |
testWindowedContext[3](2:9995-10005, 0, 3, 2:9995-10008, NNNNNNCGTATCCC) |
0s |
passed |
testWindowedContext[4](2:10005-10084, 3, 8, 2:10002-10092, GTATCCCACACACCACACCCACACACCACACCCACACACACCCACACCCACACCCACACACACCACACCCACACACCACACCCACACCCAC) |
0.001s |
passed |
testWindowedContext[5](2:15995-16000, 2, 5, 2:15993-16000, TGTGTCAG) |
0s |
passed |
testWindowlessReferenceContext[0](1:1-3, NNN) |
0s |
passed |
testWindowlessReferenceContext[1](1:11041-11045, GCAAA) |
0.001s |
passed |
testWindowlessReferenceContext[2](1:11210-11220, CGGTGCTGTGC) |
0s |
passed |
testWindowlessReferenceContext[3](2:9995-10005, NNNNNNCGTAT) |
0.001s |
passed |
testWindowlessReferenceContext[4](2:10001-10080, CGTATCCCACACACCACACCCACACACCACACCCACACACACCCACACCCACACCCACACACACCACACCCACACACCAC) |
0.001s |
passed |
testWindowlessReferenceContext[5](2:10005-10084, TCCCACACACCACACCCACACACCACACCCACACACACCCACACCCACACCCACACACACCACACCCACACACCACACCC) |
0s |
passed |
testWindowlessReferenceContext[6](2:15995-16000, TGTCAG) |
0.001s |
passed |