Class org.broadinstitute.hellbender.engine.spark.GATKSparkToolUnitTest

1

tests

0

failures

0

ignored

0.019s

duration

100%

successful

Tests

Test Duration Result
testGetDefaultToolVCFHeaderLines 0.019s passed

Standard error

21:17:53.930 INFO  TestGATKSparkToolWithVariants - ------------------------------------------------------------
21:17:53.930 INFO  TestGATKSparkToolWithVariants - The Genome Analysis Toolkit (GATK) v4.6.1.0-11-g40db79c-SNAPSHOT
21:17:53.930 INFO  TestGATKSparkToolWithVariants - For support and documentation go to https://software.broadinstitute.org/gatk/
21:17:53.930 INFO  TestGATKSparkToolWithVariants - Executing as root@947a58c13613 on Linux v6.8.0-1020-azure amd64
21:17:53.930 INFO  TestGATKSparkToolWithVariants - Java runtime: OpenJDK 64-Bit Server VM v17.0.12+7-Ubuntu-1ubuntu222.04
21:17:53.930 INFO  TestGATKSparkToolWithVariants - Start Date/Time: February 10, 2025 at 9:17:53 PM GMT
21:17:53.930 INFO  TestGATKSparkToolWithVariants - ------------------------------------------------------------
21:17:53.930 INFO  TestGATKSparkToolWithVariants - ------------------------------------------------------------
21:17:53.930 INFO  TestGATKSparkToolWithVariants - HTSJDK Defaults.COMPRESSION_LEVEL : 2
21:17:53.930 INFO  TestGATKSparkToolWithVariants - HTSJDK Defaults.USE_ASYNC_IO_READ_FOR_SAMTOOLS : false
21:17:53.930 INFO  TestGATKSparkToolWithVariants - HTSJDK Defaults.USE_ASYNC_IO_WRITE_FOR_SAMTOOLS : true
21:17:53.930 INFO  TestGATKSparkToolWithVariants - HTSJDK Defaults.USE_ASYNC_IO_WRITE_FOR_TRIBBLE : false
21:17:53.930 INFO  TestGATKSparkToolWithVariants - Deflater: IntelDeflater
21:17:53.930 INFO  TestGATKSparkToolWithVariants - Inflater: IntelInflater
21:17:53.930 INFO  TestGATKSparkToolWithVariants - GCS max retries/reopens: 20
21:17:53.930 INFO  TestGATKSparkToolWithVariants - Requester pays: disabled
21:17:53.930 INFO  TestGATKSparkToolWithVariants - Initializing engine
21:17:53.930 INFO  TestGATKSparkToolWithVariants - Done initializing engine
21:17:53.931 INFO  TestGATKSparkToolWithVariants - Spark verbosity set to INFO (see --spark-verbosity argument)
21:17:53.932 INFO  TestGATKSparkToolWithVariants - Shutting down engine
[February 10, 2025 at 9:17:53 PM GMT] org.broadinstitute.hellbender.engine.spark.GATKSparkToolUnitTest$TestGATKSparkToolWithVariants done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=849346560