Class org.broadinstitute.hellbender.testutils.SamAssertionUtilsUnitTest

24

tests

0

failures

0

ignored

0.063s

duration

100%

successful

Tests

Test Duration Result
testAssertCRAMContentsFail[0](/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/utils/test/SamAssertionUtilsUnitTest/file1.sam) 0.004s passed
testAssertCRAMContentsFail[1](/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/utils/test/SamAssertionUtilsUnitTest/file1.bam) 0.002s passed
testAssertCRAMContentsFail[2](/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/utils/test/SamAssertionUtilsUnitTest/fake_cram_with_bam_contents.cram) 0s passed
testAssertCRAMContentsIfCRAMSucceed[0](/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/utils/test/SamAssertionUtilsUnitTest/file1.sam) 0s passed
testAssertCRAMContentsIfCRAMSucceed[1](/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/utils/test/SamAssertionUtilsUnitTest/file1.bam) 0s passed
testAssertCRAMContentsIfCRAMSucceed[2](/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/utils/test/SamAssertionUtilsUnitTest/valid.cram) 0.001s passed
testAssertCRAMContentsIfCRAM[0](/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/utils/test/SamAssertionUtilsUnitTest/fake_cram_with_bam_contents.cram) 0s passed
testAssertCRAMContentsSucceed[0](/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/utils/test/SamAssertionUtilsUnitTest/valid.cram) 0s passed
testAssertOutBamContainsInBamProgramRecords 0.001s passed
testCompareStringent[0](file1.bam, file1.bam, true) 0.001s passed
testCompareStringent[10](file1.bam, file1_different_basequals.sam, false) 0.007s passed
testCompareStringent[11](file1.bam, file1_different_attributes.sam, false) 0.006s passed
testCompareStringent[12](file1.bam, file1_different_mappingQ.sam, false) 0.002s passed
testCompareStringent[13](file1.bam, file1_different_cigar.sam, false) 0.002s passed
testCompareStringent[14](file1.bam, file1_different_position.sam, false) 0.009s passed
testCompareStringent[1](file1.sam, file1.sam, true) 0.001s passed
testCompareStringent[2](file1.bam, file1.sam, true) 0.004s passed
testCompareStringent[3](file1.sam, file1.bam, true) 0.003s passed
testCompareStringent[4](file1.bam, file1_reorder_PG_header_lines.sam, true) 0.004s passed
testCompareStringent[5](file1.bam, file1_reorder_read_attributes.sam, true) 0.005s passed
testCompareStringent[6](file1.bam, file1_new_read_attribute.sam, true) 0.003s passed
testCompareStringent[7](file1.bam, file1_different_version.sam, true) 0.003s passed
testCompareStringent[8](file1.bam, file1_missing_read_attribute.sam, false) 0.002s passed
testCompareStringent[9](file1.bam, file1_different_bases.sam, false) 0.003s passed