Class org.broadinstitute.hellbender.tools.funcotator.dataSources.TableFuncotationUnitTest

54

tests

0

failures

0

ignored

0.003s

duration

100%

successful

Tests

Test Duration Result
testGetAltAllele[0](TableFuncotation{dataSourceName='TableFuncotationUnitTest', fieldMap={}, altAllele=A}, A, true) 0s passed
testGetAltAllele[1](TableFuncotation{dataSourceName='TableFuncotationUnitTest', fieldMap={}, altAllele=C}, C, true) 0s passed
testGetAltAllele[2](TableFuncotation{dataSourceName='TableFuncotationUnitTest', fieldMap={}, altAllele=G}, G, true) 0s passed
testGetAltAllele[3](TableFuncotation{dataSourceName='TableFuncotationUnitTest', fieldMap={}, altAllele=T}, T, true) 0s passed
testGetAltAllele[4](TableFuncotation{dataSourceName='TableFuncotationUnitTest', fieldMap={}, altAllele=C}, A, false) 0s passed
testGetAltAllele[5](TableFuncotation{dataSourceName='TableFuncotationUnitTest', fieldMap={}, altAllele=G}, C, false) 0s passed
testGetAltAllele[6](TableFuncotation{dataSourceName='TableFuncotationUnitTest', fieldMap={}, altAllele=T}, G, false) 0s passed
testGetAltAllele[7](TableFuncotation{dataSourceName='TableFuncotationUnitTest', fieldMap={}, altAllele=G*}, G, false) 0s passed
testGetAltAllele[8](TableFuncotation{dataSourceName='TableFuncotationUnitTest', fieldMap={}, altAllele=T*}, T, false) 0s passed
testGetFieldFail[0](TableFuncotation{dataSourceName='Empty', fieldMap={}, altAllele=A}, TESTFIELD_OMICRON) 0.001s passed
testGetFieldFail[1](TableFuncotation{dataSourceName='OneField', fieldMap={TESTFIELD:TESTVAL}, altAllele=A}, testfield) 0s passed
testGetFieldFail[2](TableFuncotation{dataSourceName='OneField', fieldMap={TESTFIELD:TESTVAL}, altAllele=A}, table_TESTFIELD) 0s passed
testGetFieldFail[3](TableFuncotation{dataSourceName='ThreeFields', fieldMap={TESTFIELD1:TESTVAL1 , TESTFIELD2:TESTVAL2 , TESTFIELD3:TESTVAL3}, altAllele=A}, TESTFIELD4) 0s passed
testGetFieldNames[0](TableFuncotation{dataSourceName='Empty', fieldMap={}, altAllele=A}, []) 0s passed
testGetFieldNames[1](TableFuncotation{dataSourceName='OneField', fieldMap={TESTFIELD:TESTVAL}, altAllele=A}, [TESTFIELD]) 0s passed
testGetFieldNames[2](TableFuncotation{dataSourceName='TwoFields', fieldMap={TESTFIELD1:TESTVAL1 , TESTFIELD2:TESTVAL2}, altAllele=A}, [TESTFIELD1, TESTFIELD2]) 0s passed
testGetField[0](TableFuncotation{dataSourceName='OneField', fieldMap={TESTFIELD:TESTVAL}, altAllele=A}, TESTFIELD, TESTVAL) 0s passed
testGetField[1](TableFuncotation{dataSourceName='TwoFields', fieldMap={TESTFIELD1:TESTVAL1 , TESTFIELD2:TESTVAL2}, altAllele=A}, TESTFIELD1, TESTVAL1) 0s passed
testGetField[2](TableFuncotation{dataSourceName='TwoFields', fieldMap={TESTFIELD1:TESTVAL1 , TESTFIELD2:TESTVAL2}, altAllele=A}, TESTFIELD2, TESTVAL2) 0s passed
testGetField[3](TableFuncotation{dataSourceName='ThreeFields', fieldMap={TESTFIELD1:TESTVAL1 , TESTFIELD2:TESTVAL2 , TESTFIELD3:TESTVAL3}, altAllele=A}, TESTFIELD1, TESTVAL1) 0s passed
testGetField[4](TableFuncotation{dataSourceName='ThreeFields', fieldMap={TESTFIELD1:TESTVAL1 , TESTFIELD2:TESTVAL2 , TESTFIELD3:TESTVAL3}, altAllele=A}, TESTFIELD2, TESTVAL2) 0s passed
testGetField[5](TableFuncotation{dataSourceName='ThreeFields', fieldMap={TESTFIELD1:TESTVAL1 , TESTFIELD2:TESTVAL2 , TESTFIELD3:TESTVAL3}, altAllele=A}, TESTFIELD3, TESTVAL3) 0s passed
testGet[0](X) 0s passed
testGet[1](A) 0s passed
testGet[2](B) 0s passed
testGet[3](Y) 0s passed
testGet[4](L) 0s passed
testGet[5](R) 0s passed
testGet[6](Select) 0s passed
testGet[7](Start) 0s passed
testKeySet[0]([A]) 0.001s passed
testKeySet[1]([A, B]) 0s passed
testKeySet[2]([A, B, C]) 0s passed
testKeySet[3]([A, B, C, D]) 0s passed
testKeySet[4]([A, B, C, D, E]) 0s passed
testSerializeToVcfString[0](TableFuncotation{dataSourceName='Empty', fieldMap={}, altAllele=A}, ) 0s passed
testSerializeToVcfString[1](TableFuncotation{dataSourceName='OneVal', fieldMap={A:1}, altAllele=A}, 1) 0s passed
testSerializeToVcfString[2](TableFuncotation{dataSourceName='TwoVals', fieldMap={A:1 , B:2}, altAllele=A}, 1|2) 0s passed
testSerializeToVcfString[3](TableFuncotation{dataSourceName='ThreeVals', fieldMap={A:1 , B:2 , C:3}, altAllele=A}, 1|2|3) 0s passed
testSetFieldSerializationOverrideValue[0](TableFuncotation{dataSourceName='TableFuncotation', fieldMap={A:1 , B:2 , C:3}, altAllele=A}, A, null) 0.001s passed
testSetFieldSerializationOverrideValue[1](TableFuncotation{dataSourceName='TableFuncotation', fieldMap={A:1 , B:2 , C:3}, altAllele=A}, A, A) 0s passed
testSetFieldSerializationOverrideValue[2](TableFuncotation{dataSourceName='TableFuncotation', fieldMap={A:A , B:2 , C:3}, altAllele=A}, A, B) 0s passed
testSetFieldSerializationOverrideValue[3](TableFuncotation{dataSourceName='TableFuncotation', fieldMap={A:B , B:2 , C:3}, altAllele=A}, A, C) 0s passed
testSetFieldSerializationOverrideValue[4](TableFuncotation{dataSourceName='TableFuncotation', fieldMap={A:C , B:2 , C:3}, altAllele=A}, B, A) 0s passed
testSetFieldSerializationOverrideValue[5](TableFuncotation{dataSourceName='TableFuncotation', fieldMap={A:C , B:A , C:3}, altAllele=A}, B, B) 0s passed
testSetFieldSerializationOverrideValue[6](TableFuncotation{dataSourceName='TableFuncotation', fieldMap={A:C , B:B , C:3}, altAllele=A}, B, C) 0s passed
testSetFieldSerializationOverrideValue[7](TableFuncotation{dataSourceName='TableFuncotation', fieldMap={A:C , B:C , C:3}, altAllele=A}, C, A) 0s passed
testSetFieldSerializationOverrideValue[8](TableFuncotation{dataSourceName='TableFuncotation', fieldMap={A:C , B:C , C:A}, altAllele=A}, C, B) 0s passed
testSetFieldSerializationOverrideValue[9](TableFuncotation{dataSourceName='TableFuncotation', fieldMap={A:C , B:C , C:B}, altAllele=A}, C, C) 0s passed
testValues[0]([A]) 0s passed
testValues[1]([A, B]) 0s passed
testValues[2]([A, B, C]) 0s passed
testValues[3]([A, B, C, D]) 0s passed
testValues[4]([A, B, C, D, E]) 0s passed