Class org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupCodecUnitTest

39

tests

0

failures

0

ignored

0.002s

duration

100%

successful

Tests

Test Duration Result
testCanDecode 0s passed
testDecodeLoc[0](seq1 126 A 36 AaCcTtGgNn.,^~A^@a^~.^@,A$a$.$,$+11CCCCCCCCCCCA+11CCCCCCCCCCCa+11CCCCCCCCCCC.+11CCCCCCCCCCC,-11CCCCCCCCCCCA-11CCCCCCCCCCCa-11CCCCCCCCCCC.-11CCCCCCCCCCC,A+11CCCCCCCCCCCa+11CCCCCCCCCCC.+11CCCCCCCCCCC,+11CCCCCCCCCCCA-11CCCCCCCCCCCa-11CCCCCCCCCCC.-11CCCCCCCCCCC,-11CCCCCCCCCCC I;I;I;I;I;I;I;I;I;I;I;I;I;I;I;I;I;I;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupFeature@46969355) 0s passed
testDecode[0](seq1 126 A 36 AaCcTtGgNn.,^~A^@a^~.^@,A$a$.$,$+11CCCCCCCCCCCA+11CCCCCCCCCCCa+11CCCCCCCCCCC.+11CCCCCCCCCCC,-11CCCCCCCCCCCA-11CCCCCCCCCCCa-11CCCCCCCCCCC.-11CCCCCCCCCCC,A+11CCCCCCCCCCCa+11CCCCCCCCCCC.+11CCCCCCCCCCC,+11CCCCCCCCCCCA-11CCCCCCCCCCCa-11CCCCCCCCCCC.-11CCCCCCCCCCC,-11CCCCCCCCCCC I;I;I;I;I;I;I;I;I;I;I;I;I;I;I;I;I;I;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupFeature@4a1bb556) 0.002s passed
testParseOneBaseAndQuality[0](A, I, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@5a0d25ba) 0s passed
testParseOneBaseAndQuality[10](., I, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@29f94912) 0s passed
testParseOneBaseAndQuality[11](,, ;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@11bb0655) 0s passed
testParseOneBaseAndQuality[12](^~A, I, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@54fc7fce) 0s passed
testParseOneBaseAndQuality[13](^@a, ;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@4f36fc2d) 0s passed
testParseOneBaseAndQuality[14](^~., I, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@3fe5c9f1) 0s passed
testParseOneBaseAndQuality[15](^@,, ;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@775429c8) 0s passed
testParseOneBaseAndQuality[16](A$, I, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@6aa7ea23) 0s passed
testParseOneBaseAndQuality[17](a$, ;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@24763d10) 0s passed
testParseOneBaseAndQuality[18](.$, I, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@112ec8a7) 0s passed
testParseOneBaseAndQuality[19](,$, ;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@70347322) 0s passed
testParseOneBaseAndQuality[1](a, ;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@1bb6b0f3) 0s passed
testParseOneBaseAndQuality[20](+11CCCCCCCCCCCA, I, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@3db8bbbe) 0s passed
testParseOneBaseAndQuality[21](+11CCCCCCCCCCCa, ;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@7107a4a3) 0s passed
testParseOneBaseAndQuality[22](+11CCCCCCCCCCC., I, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@7288afd8) 0s passed
testParseOneBaseAndQuality[23](+11CCCCCCCCCCC,, ;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@57832650) 0s passed
testParseOneBaseAndQuality[24](-11CCCCCCCCCCCA, I, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@46724526) 0s passed
testParseOneBaseAndQuality[25](-11CCCCCCCCCCCa, ;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@7e4fc391) 0s passed
testParseOneBaseAndQuality[26](-11CCCCCCCCCCC., I, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@4589bc66) 0s passed
testParseOneBaseAndQuality[27](-11CCCCCCCCCCC,, ;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@734fcb45) 0s passed
testParseOneBaseAndQuality[28](A+11CCCCCCCCCCC, I, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@5e0e97b6) 0s passed
testParseOneBaseAndQuality[29](a+11CCCCCCCCCCC, ;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@46f03d6d) 0s passed
testParseOneBaseAndQuality[2](C, I, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@1858f93e) 0s passed
testParseOneBaseAndQuality[30](.+11CCCCCCCCCCC, I, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@596c6c3e) 0s passed
testParseOneBaseAndQuality[31](,+11CCCCCCCCCCC, ;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@13c02cec) 0s passed
testParseOneBaseAndQuality[32](A-11CCCCCCCCCCC, I, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@75e81be2) 0s passed
testParseOneBaseAndQuality[33](a-11CCCCCCCCCCC, ;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@50b4e828) 0s passed
testParseOneBaseAndQuality[34](.-11CCCCCCCCCCC, I, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@56c75b4f) 0s passed
testParseOneBaseAndQuality[35](,-11CCCCCCCCCCC, ;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@6bd01b0e) 0s passed
testParseOneBaseAndQuality[3](c, ;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@7e654c) 0s passed
testParseOneBaseAndQuality[4](T, I, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@2dc199d4) 0s passed
testParseOneBaseAndQuality[5](t, ;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@7b6846c6) 0s passed
testParseOneBaseAndQuality[6](G, I, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@503e1cd9) 0s passed
testParseOneBaseAndQuality[7](g, ;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@195267c8) 0s passed
testParseOneBaseAndQuality[8](N, I, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@496a514f) 0s passed
testParseOneBaseAndQuality[9](n, ;, org.broadinstitute.hellbender.utils.codecs.sampileup.SAMPileupElement@4968deb9) 0s passed