Class org.broadinstitute.hellbender.utils.nio.NioFileCopierWithProgressMeterUnitTest

42

tests

0

failures

0

ignored

0.011s

duration

100%

successful

Tests

Test Duration Result
testCreate[0](/gatkCloneMountPoint/src/test/resources/large/funcotator/GRCh37.p13.chr19.tar.gz, /tmp/tmp1007333874693786421.tar.gz, true, MODERATE) 0.002s passed
testCreate[1](/gatkCloneMountPoint/src/test/resources/large/funcotator/gencode.v19.pc_transcripts.fasta, /tmp/tmp212127492707177438311.fasta, false, MODERATE) 0s passed
testCreate[2](/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/funcotator/dbSNP_hg19_snippet.vcf, /tmp/tmp35459949843852065021.vcf, true, MINIMAL) 0s passed
testCreate[3](/gatkCloneMountPoint/src/test/resources/large/funcotator/hg38.3.tar.gz, /tmp/tmp41827187231797241443.fasta, false, MINIMAL) 0.001s passed
testCreate[4](/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/funcotator/PIK3CA_INDELS, /tmp/tmp515715419801740496764.vcf, null, MINIMAL) 0s passed
testCreate[5](/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/funcotator/xsv_DEADBEEFSV_testFile.csv, /tmp/tmp63771379014571949081.xsv, false, null) 0s passed
testCreate[6](/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/funcotator/snpTest_chr19_hg19.vcf, /tmp/tmp712891148723926836049.vcf, null, null) 0.001s passed
testGetDest[0](/gatkCloneMountPoint/src/test/resources/large/funcotator/GRCh37.p13.chr19.tar.gz, /tmp/tmp7155296373115295135.tar.gz, true, MODERATE) 0s passed
testGetDest[1](/gatkCloneMountPoint/src/test/resources/large/funcotator/gencode.v19.pc_transcripts.fasta, /tmp/tmp217808549540444918388.fasta, false, MODERATE) 0.001s passed
testGetDest[2](/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/funcotator/dbSNP_hg19_snippet.vcf, /tmp/tmp33193005386421108894.vcf, true, MINIMAL) 0s passed
testGetDest[3](/gatkCloneMountPoint/src/test/resources/large/funcotator/hg38.3.tar.gz, /tmp/tmp416090421957746268449.fasta, false, MINIMAL) 0s passed
testGetDest[4](/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/funcotator/PIK3CA_INDELS, /tmp/tmp57791102203518062474.vcf, null, MINIMAL) 0.001s passed
testGetDest[5](/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/funcotator/xsv_DEADBEEFSV_testFile.csv, /tmp/tmp614375091791528069641.xsv, false, null) 0s passed
testGetDest[6](/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/funcotator/snpTest_chr19_hg19.vcf, /tmp/tmp77827961894291630489.vcf, null, null) 0s passed
testGetSource[0](/gatkCloneMountPoint/src/test/resources/large/funcotator/GRCh37.p13.chr19.tar.gz, /tmp/tmp17820917435470998848.tar.gz, true, MODERATE) 0.001s passed
testGetSource[1](/gatkCloneMountPoint/src/test/resources/large/funcotator/gencode.v19.pc_transcripts.fasta, /tmp/tmp215416354865361236986.fasta, false, MODERATE) 0s passed
testGetSource[2](/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/funcotator/dbSNP_hg19_snippet.vcf, /tmp/tmp33278573394003561673.vcf, true, MINIMAL) 0s passed
testGetSource[3](/gatkCloneMountPoint/src/test/resources/large/funcotator/hg38.3.tar.gz, /tmp/tmp417684914265896608433.fasta, false, MINIMAL) 0.001s passed
testGetSource[4](/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/funcotator/PIK3CA_INDELS, /tmp/tmp51967134667538952973.vcf, null, MINIMAL) 0s passed
testGetSource[5](/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/funcotator/xsv_DEADBEEFSV_testFile.csv, /tmp/tmp610777841603171463390.xsv, false, null) 0s passed
testGetSource[6](/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/funcotator/snpTest_chr19_hg19.vcf, /tmp/tmp79164249312308881317.vcf, null, null) 0.001s passed
testIsDoLogProgress[0](/gatkCloneMountPoint/src/test/resources/large/funcotator/GRCh37.p13.chr19.tar.gz, /tmp/tmp5533195891307051522.tar.gz, true, MODERATE) 0s passed
testIsDoLogProgress[1](/gatkCloneMountPoint/src/test/resources/large/funcotator/gencode.v19.pc_transcripts.fasta, /tmp/tmp212969489750837347789.fasta, false, MODERATE) 0s passed
testIsDoLogProgress[2](/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/funcotator/dbSNP_hg19_snippet.vcf, /tmp/tmp33556954486477804096.vcf, true, MINIMAL) 0s passed
testIsDoLogProgress[3](/gatkCloneMountPoint/src/test/resources/large/funcotator/hg38.3.tar.gz, /tmp/tmp49480149592074190063.fasta, false, MINIMAL) 0s passed
testIsDoLogProgress[4](/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/funcotator/PIK3CA_INDELS, /tmp/tmp515809549935512985527.vcf, null, MINIMAL) 0s passed
testIsDoLogProgress[5](/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/funcotator/xsv_DEADBEEFSV_testFile.csv, /tmp/tmp614186884797229803759.xsv, false, null) 0s passed
testIsDoLogProgress[6](/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/funcotator/snpTest_chr19_hg19.vcf, /tmp/tmp712373153080738664501.vcf, null, null) 0s passed
testIsOverwriteExisting[0](/gatkCloneMountPoint/src/test/resources/large/funcotator/GRCh37.p13.chr19.tar.gz, /tmp/tmp7627919935505412166.tar.gz, true, MODERATE) 0s passed
testIsOverwriteExisting[1](/gatkCloneMountPoint/src/test/resources/large/funcotator/gencode.v19.pc_transcripts.fasta, /tmp/tmp26660233283911700397.fasta, false, MODERATE) 0s passed
testIsOverwriteExisting[2](/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/funcotator/dbSNP_hg19_snippet.vcf, /tmp/tmp310906079451670375541.vcf, true, MINIMAL) 0s passed
testIsOverwriteExisting[3](/gatkCloneMountPoint/src/test/resources/large/funcotator/hg38.3.tar.gz, /tmp/tmp414133152865159289365.fasta, false, MINIMAL) 0s passed
testIsOverwriteExisting[4](/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/funcotator/PIK3CA_INDELS, /tmp/tmp517514988348421533931.vcf, null, MINIMAL) 0s passed
testIsOverwriteExisting[5](/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/funcotator/xsv_DEADBEEFSV_testFile.csv, /tmp/tmp614346303803837455395.xsv, false, null) 0s passed
testIsOverwriteExisting[6](/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/funcotator/snpTest_chr19_hg19.vcf, /tmp/tmp717544423257620403699.vcf, null, null) 0s passed
testSetOverwriteExisting[0](/gatkCloneMountPoint/src/test/resources/large/funcotator/GRCh37.p13.chr19.tar.gz, /tmp/tmp7678820894630836302.tar.gz, false, MODERATE, false) 0s passed
testSetOverwriteExisting[1](/gatkCloneMountPoint/src/test/resources/large/funcotator/GRCh37.p13.chr19.tar.gz, /tmp/tmp7507848556149856820.tar.gz, true, MODERATE, true) 0.001s passed
testSetVerbosity[0](/gatkCloneMountPoint/src/test/resources/large/funcotator/GRCh37.p13.chr19.tar.gz, /tmp/tmp4289885791999681403.tar.gz, true, MODERATE, MODERATE) 0.001s passed
testSetVerbosity[1](/gatkCloneMountPoint/src/test/resources/large/funcotator/GRCh37.p13.chr19.tar.gz, /tmp/tmp4490159711411709806.tar.gz, true, MINIMAL, MINIMAL) 0s passed
testSetVerbosity[2](/gatkCloneMountPoint/src/test/resources/large/funcotator/GRCh37.p13.chr19.tar.gz, /tmp/tmp8571827229495192103.tar.gz, true, SILENT, SILENT) 0s passed
testSetVerbosity[3](/gatkCloneMountPoint/src/test/resources/large/funcotator/GRCh37.p13.chr19.tar.gz, /tmp/tmp7644337768456001865.tar.gz, true, VERBOSE, VERBOSE) 0s passed
testSetVerbosity[4](/gatkCloneMountPoint/src/test/resources/large/funcotator/GRCh37.p13.chr19.tar.gz, /tmp/tmp4126748357478930205.tar.gz, true, null, MODERATE) 0s passed