| Test |
Duration |
Result |
| testEmptyPileup |
0.002s |
passed |
| testFixOverlappingQualitiesDeletedElements |
0s |
passed |
| testFixPairOverlappingQualitiesCap |
0s |
passed |
| testFixPairOverlappingQualitiesFromReadPileup[0](default_read @ 0 = A Q60, default_read @ 0 = A Q10, 70, 0) |
0.001s |
passed |
| testFixPairOverlappingQualitiesFromReadPileup[1](default_read @ 1 = A Q60, default_read @ 1 = T Q60, 48, 0) |
0s |
passed |
| testFixPairOverlappingQualitiesFromReadPileup[2](default_read @ 2 = A Q60, default_read @ 2 = T Q10, 48, 0) |
0s |
passed |
| testFixPairOverlappingQualitiesFromReadPileup[3](default_read @ 3 = A Q10, default_read @ 3 = T Q60, 0, 48) |
0s |
passed |
| testFixPairOverlappingQualitiesFromReadPileup[4](default_read @ 4 = T Q60, default_read @ 4 = T Q60, 93, 0) |
0.001s |
passed |
| testFixPairOverlappingQualitiesFromReadPileup[5](default_read @ 5 = T Q93, default_read @ 5 = T Q93, 93, 0) |
0s |
passed |
| testFixPairOverlappingQualities[0](default_read @ 0 = A Q60, default_read @ 0 = A Q10, 70, 0) |
0.001s |
passed |
| testFixPairOverlappingQualities[1](default_read @ 1 = A Q60, default_read @ 1 = T Q60, 48, 0) |
0s |
passed |
| testFixPairOverlappingQualities[2](default_read @ 2 = A Q60, default_read @ 2 = T Q10, 48, 0) |
0s |
passed |
| testFixPairOverlappingQualities[3](default_read @ 3 = A Q10, default_read @ 3 = T Q60, 0, 48) |
0s |
passed |
| testFixPairOverlappingQualities[4](default_read @ 4 = T Q60, default_read @ 4 = T Q60, 93, 0) |
0s |
passed |
| testFixPairOverlappingQualities[5](default_read @ 5 = T Q93, default_read @ 5 = T Q93, 93, 0) |
0s |
passed |
| testGetPileup |
0.005s |
passed |
| testGetPileupForSample |
0.003s |
passed |
| testInvalidConstructorParametersReadsAndOffsetsLists |
0s |
passed |
| testOverlappingFragmentFilter |
0s |
passed |
| testReadPileupCountingTestSinglePileup[0](ReadPileupCountTest{sample='sampleb2a429a9-167f-4e86-8ca0-a1d01b936d7c', nReads=10, nMapq0=0, nDeletions=0}) |
0.004s |
passed |
| testReadPileupCountingTestSinglePileup[10](ReadPileupCountTest{sample='sample210572fe-cd5e-4fff-acb8-37064dc00757', nReads=30, nMapq0=10, nDeletions=0}) |
0s |
passed |
| testReadPileupCountingTestSinglePileup[11](ReadPileupCountTest{sample='sample1fff4f4c-0bd9-4b1d-a3f3-322b7ae0ecb4', nReads=20, nMapq0=10, nDeletions=10}) |
0s |
passed |
| testReadPileupCountingTestSinglePileup[12](ReadPileupCountTest{sample='sample1bcc14eb-7fa5-4c71-8218-5110cbc3dc4c', nReads=30, nMapq0=10, nDeletions=10}) |
0s |
passed |
| testReadPileupCountingTestSinglePileup[13](ReadPileupCountTest{sample='samplec8c652c0-c581-4621-83d0-bf9e5eb0c0f0', nReads=40, nMapq0=10, nDeletions=10}) |
0.001s |
passed |
| testReadPileupCountingTestSinglePileup[14](ReadPileupCountTest{sample='sample2a7dea7c-ae76-4162-9373-2f11245177e0', nReads=30, nMapq0=10, nDeletions=20}) |
0s |
passed |
| testReadPileupCountingTestSinglePileup[15](ReadPileupCountTest{sample='sample2a5c4c06-073e-455b-8d31-13c6cfa622ea', nReads=40, nMapq0=10, nDeletions=20}) |
0s |
passed |
| testReadPileupCountingTestSinglePileup[16](ReadPileupCountTest{sample='sample845daefd-bcbc-4cbc-8789-d954a76acef9', nReads=50, nMapq0=10, nDeletions=20}) |
0s |
passed |
| testReadPileupCountingTestSinglePileup[17](ReadPileupCountTest{sample='sample5b37d90e-8a87-441d-95cd-cc3ddb50ae5a', nReads=20, nMapq0=20, nDeletions=0}) |
0s |
passed |
| testReadPileupCountingTestSinglePileup[18](ReadPileupCountTest{sample='samplee7ff0a72-b582-4063-be71-99e221d67157', nReads=30, nMapq0=20, nDeletions=0}) |
0s |
passed |
| testReadPileupCountingTestSinglePileup[19](ReadPileupCountTest{sample='sample30a5a84f-632e-49fe-b525-76cb2c063c67', nReads=40, nMapq0=20, nDeletions=0}) |
0s |
passed |
| testReadPileupCountingTestSinglePileup[1](ReadPileupCountTest{sample='samplee8c7167c-928d-448f-94fe-dcc199fc9059', nReads=20, nMapq0=0, nDeletions=0}) |
0s |
passed |
| testReadPileupCountingTestSinglePileup[20](ReadPileupCountTest{sample='sample7dd2577f-8482-4d20-aaab-fcd50cae172c', nReads=30, nMapq0=20, nDeletions=10}) |
0s |
passed |
| testReadPileupCountingTestSinglePileup[21](ReadPileupCountTest{sample='samplef5159f0c-9d38-4a48-af8b-2d6aec4e74ce', nReads=40, nMapq0=20, nDeletions=10}) |
0s |
passed |
| testReadPileupCountingTestSinglePileup[22](ReadPileupCountTest{sample='sample4c74fae9-2d2f-4d9d-bdbe-78cfea9f999c', nReads=50, nMapq0=20, nDeletions=10}) |
0s |
passed |
| testReadPileupCountingTestSinglePileup[23](ReadPileupCountTest{sample='samplecb69276a-fbdc-49fb-beef-40a658334095', nReads=40, nMapq0=20, nDeletions=20}) |
0s |
passed |
| testReadPileupCountingTestSinglePileup[24](ReadPileupCountTest{sample='sample7b30bc00-ea36-42a8-87a4-4bc06228b4d0', nReads=50, nMapq0=20, nDeletions=20}) |
0s |
passed |
| testReadPileupCountingTestSinglePileup[25](ReadPileupCountTest{sample='samplec63f4f9c-db42-45d4-b93c-dff058351ac9', nReads=60, nMapq0=20, nDeletions=20}) |
0s |
passed |
| testReadPileupCountingTestSinglePileup[2](ReadPileupCountTest{sample='sample21f88e03-733f-4514-93f6-3af5cbc7dffa', nReads=10, nMapq0=0, nDeletions=10}) |
0s |
passed |
| testReadPileupCountingTestSinglePileup[3](ReadPileupCountTest{sample='sample69f42c4b-deb4-4789-8968-19889da79c99', nReads=20, nMapq0=0, nDeletions=10}) |
0s |
passed |
| testReadPileupCountingTestSinglePileup[4](ReadPileupCountTest{sample='sample65a35bff-a681-4aa7-9b3e-b22982c873ef', nReads=30, nMapq0=0, nDeletions=10}) |
0s |
passed |
| testReadPileupCountingTestSinglePileup[5](ReadPileupCountTest{sample='samplea7bf2f32-b10d-4ee1-9538-96ba97d65e0d', nReads=20, nMapq0=0, nDeletions=20}) |
0s |
passed |
| testReadPileupCountingTestSinglePileup[6](ReadPileupCountTest{sample='sample69ff8607-53d3-40bd-ad59-0d8f7d87d577', nReads=30, nMapq0=0, nDeletions=20}) |
0s |
passed |
| testReadPileupCountingTestSinglePileup[7](ReadPileupCountTest{sample='sample79b8f5b1-3601-47eb-a9d2-d3fb868cd176', nReads=40, nMapq0=0, nDeletions=20}) |
0s |
passed |
| testReadPileupCountingTestSinglePileup[8](ReadPileupCountTest{sample='sampled562f09a-f07f-4a48-94c4-c8779a7e900c', nReads=10, nMapq0=10, nDeletions=0}) |
0s |
passed |
| testReadPileupCountingTestSinglePileup[9](ReadPileupCountTest{sample='sample6f7fc3cb-da50-4d11-ad60-7d550e4d713e', nReads=20, nMapq0=10, nDeletions=0}) |
0s |
passed |
| testReadPileupMappingQuals |
0.001s |
passed |
| testSimplePileup |
0.001s |
passed |
| testSimplePileupWithIndelsOffset |
0.002s |
passed |
| testSimplePileupWithOffset |
0.001s |
passed |
| testSortedIterator |
0s |
passed |
| testSplitByNullReadGroups |
0.001s |
passed |
| testSplitByReadGroup |
0.001s |
passed |
| testSplitBySampleMissingReadGroupException |
0s |
passed |