Class org.broadinstitute.hellbender.utils.read.ArtificialBAMBuilderUnitTest

all > org.broadinstitute.hellbender.utils.read > ArtificialBAMBuilderUnitTest
72

tests
0

failures
0

ignored
1.624s

duration
100%

successful

Tests

Test Duration Result
testBamProvider[0](ArtificialBAMBuilder{samples=[sample0], readLength=10, alignmentStart=1, skipNLoci=0, nLoci=10, nReadsPerLocus=1}, 10, 0, 1, 1, 1, 10) 0.077s passed
testBamProvider[10](ArtificialBAMBuilder{samples=[sample0, sample1], readLength=10, alignmentStart=1, skipNLoci=0, nLoci=100, nReadsPerLocus=10}, 10, 0, 1, 2, 10, 100) 0.019s passed
testBamProvider[11](ArtificialBAMBuilder{samples=[sample0, sample1], readLength=10, alignmentStart=1, skipNLoci=0, nLoci=1000, nReadsPerLocus=10}, 10, 0, 1, 2, 10, 1000) 0.167s passed
testBamProvider[12](ArtificialBAMBuilder{samples=[sample0], readLength=10, alignmentStart=1, skipNLoci=1, nLoci=10, nReadsPerLocus=1}, 10, 1, 1, 1, 1, 10) 0.003s passed
testBamProvider[13](ArtificialBAMBuilder{samples=[sample0], readLength=10, alignmentStart=1, skipNLoci=1, nLoci=100, nReadsPerLocus=1}, 10, 1, 1, 1, 1, 100) 0.003s passed
testBamProvider[14](ArtificialBAMBuilder{samples=[sample0], readLength=10, alignmentStart=1, skipNLoci=1, nLoci=1000, nReadsPerLocus=1}, 10, 1, 1, 1, 1, 1000) 0.007s passed
testBamProvider[15](ArtificialBAMBuilder{samples=[sample0], readLength=10, alignmentStart=1, skipNLoci=1, nLoci=10, nReadsPerLocus=10}, 10, 1, 1, 1, 10, 10) 0.003s passed
testBamProvider[16](ArtificialBAMBuilder{samples=[sample0], readLength=10, alignmentStart=1, skipNLoci=1, nLoci=100, nReadsPerLocus=10}, 10, 1, 1, 1, 10, 100) 0.007s passed
testBamProvider[17](ArtificialBAMBuilder{samples=[sample0], readLength=10, alignmentStart=1, skipNLoci=1, nLoci=1000, nReadsPerLocus=10}, 10, 1, 1, 1, 10, 1000) 0.109s passed
testBamProvider[18](ArtificialBAMBuilder{samples=[sample0, sample1], readLength=10, alignmentStart=1, skipNLoci=1, nLoci=10, nReadsPerLocus=1}, 10, 1, 1, 2, 1, 10) 0.003s passed
testBamProvider[19](ArtificialBAMBuilder{samples=[sample0, sample1], readLength=10, alignmentStart=1, skipNLoci=1, nLoci=100, nReadsPerLocus=1}, 10, 1, 1, 2, 1, 100) 0.003s passed
testBamProvider[1](ArtificialBAMBuilder{samples=[sample0], readLength=10, alignmentStart=1, skipNLoci=0, nLoci=100, nReadsPerLocus=1}, 10, 0, 1, 1, 1, 100) 0.012s passed
testBamProvider[20](ArtificialBAMBuilder{samples=[sample0, sample1], readLength=10, alignmentStart=1, skipNLoci=1, nLoci=1000, nReadsPerLocus=1}, 10, 1, 1, 2, 1, 1000) 0.014s passed
testBamProvider[21](ArtificialBAMBuilder{samples=[sample0, sample1], readLength=10, alignmentStart=1, skipNLoci=1, nLoci=10, nReadsPerLocus=10}, 10, 1, 1, 2, 10, 10) 0.002s passed
testBamProvider[22](ArtificialBAMBuilder{samples=[sample0, sample1], readLength=10, alignmentStart=1, skipNLoci=1, nLoci=100, nReadsPerLocus=10}, 10, 1, 1, 2, 10, 100) 0.063s passed
testBamProvider[23](ArtificialBAMBuilder{samples=[sample0, sample1], readLength=10, alignmentStart=1, skipNLoci=1, nLoci=1000, nReadsPerLocus=10}, 10, 1, 1, 2, 10, 1000) 0.135s passed
testBamProvider[24](ArtificialBAMBuilder{samples=[sample0], readLength=10, alignmentStart=1, skipNLoci=10, nLoci=10, nReadsPerLocus=1}, 10, 10, 1, 1, 1, 10) 0.003s passed
testBamProvider[25](ArtificialBAMBuilder{samples=[sample0], readLength=10, alignmentStart=1, skipNLoci=10, nLoci=100, nReadsPerLocus=1}, 10, 10, 1, 1, 1, 100) 0.002s passed
testBamProvider[26](ArtificialBAMBuilder{samples=[sample0], readLength=10, alignmentStart=1, skipNLoci=10, nLoci=1000, nReadsPerLocus=1}, 10, 10, 1, 1, 1, 1000) 0.006s passed
testBamProvider[27](ArtificialBAMBuilder{samples=[sample0], readLength=10, alignmentStart=1, skipNLoci=10, nLoci=10, nReadsPerLocus=10}, 10, 10, 1, 1, 10, 10) 0.002s passed
testBamProvider[28](ArtificialBAMBuilder{samples=[sample0], readLength=10, alignmentStart=1, skipNLoci=10, nLoci=100, nReadsPerLocus=10}, 10, 10, 1, 1, 10, 100) 0.005s passed
testBamProvider[29](ArtificialBAMBuilder{samples=[sample0], readLength=10, alignmentStart=1, skipNLoci=10, nLoci=1000, nReadsPerLocus=10}, 10, 10, 1, 1, 10, 1000) 0.043s passed
testBamProvider[2](ArtificialBAMBuilder{samples=[sample0], readLength=10, alignmentStart=1, skipNLoci=0, nLoci=1000, nReadsPerLocus=1}, 10, 0, 1, 1, 1, 1000) 0.045s passed
testBamProvider[30](ArtificialBAMBuilder{samples=[sample0, sample1], readLength=10, alignmentStart=1, skipNLoci=10, nLoci=10, nReadsPerLocus=1}, 10, 10, 1, 2, 1, 10) 0.002s passed
testBamProvider[31](ArtificialBAMBuilder{samples=[sample0, sample1], readLength=10, alignmentStart=1, skipNLoci=10, nLoci=100, nReadsPerLocus=1}, 10, 10, 1, 2, 1, 100) 0.003s passed
testBamProvider[32](ArtificialBAMBuilder{samples=[sample0, sample1], readLength=10, alignmentStart=1, skipNLoci=10, nLoci=1000, nReadsPerLocus=1}, 10, 10, 1, 2, 1, 1000) 0.009s passed
testBamProvider[33](ArtificialBAMBuilder{samples=[sample0, sample1], readLength=10, alignmentStart=1, skipNLoci=10, nLoci=10, nReadsPerLocus=10}, 10, 10, 1, 2, 10, 10) 0.003s passed
testBamProvider[34](ArtificialBAMBuilder{samples=[sample0, sample1], readLength=10, alignmentStart=1, skipNLoci=10, nLoci=100, nReadsPerLocus=10}, 10, 10, 1, 2, 10, 100) 0.060s passed
testBamProvider[35](ArtificialBAMBuilder{samples=[sample0, sample1], readLength=10, alignmentStart=1, skipNLoci=10, nLoci=1000, nReadsPerLocus=10}, 10, 10, 1, 2, 10, 1000) 0.085s passed
testBamProvider[36](ArtificialBAMBuilder{samples=[sample0], readLength=20, alignmentStart=1, skipNLoci=0, nLoci=10, nReadsPerLocus=1}, 20, 0, 1, 1, 1, 10) 0.003s passed
testBamProvider[37](ArtificialBAMBuilder{samples=[sample0], readLength=20, alignmentStart=1, skipNLoci=0, nLoci=100, nReadsPerLocus=1}, 20, 0, 1, 1, 1, 100) 0.002s passed
testBamProvider[38](ArtificialBAMBuilder{samples=[sample0], readLength=20, alignmentStart=1, skipNLoci=0, nLoci=1000, nReadsPerLocus=1}, 20, 0, 1, 1, 1, 1000) 0.054s passed
testBamProvider[39](ArtificialBAMBuilder{samples=[sample0], readLength=20, alignmentStart=1, skipNLoci=0, nLoci=10, nReadsPerLocus=10}, 20, 0, 1, 1, 10, 10) 0.001s passed
testBamProvider[3](ArtificialBAMBuilder{samples=[sample0], readLength=10, alignmentStart=1, skipNLoci=0, nLoci=10, nReadsPerLocus=10}, 10, 0, 1, 1, 10, 10) 0.004s passed
testBamProvider[40](ArtificialBAMBuilder{samples=[sample0], readLength=20, alignmentStart=1, skipNLoci=0, nLoci=100, nReadsPerLocus=10}, 20, 0, 1, 1, 10, 100) 0.004s passed
testBamProvider[41](ArtificialBAMBuilder{samples=[sample0], readLength=20, alignmentStart=1, skipNLoci=0, nLoci=1000, nReadsPerLocus=10}, 20, 0, 1, 1, 10, 1000) 0.039s passed
testBamProvider[42](ArtificialBAMBuilder{samples=[sample0, sample1], readLength=20, alignmentStart=1, skipNLoci=0, nLoci=10, nReadsPerLocus=1}, 20, 0, 1, 2, 1, 10) 0.001s passed
testBamProvider[43](ArtificialBAMBuilder{samples=[sample0, sample1], readLength=20, alignmentStart=1, skipNLoci=0, nLoci=100, nReadsPerLocus=1}, 20, 0, 1, 2, 1, 100) 0.002s passed
testBamProvider[44](ArtificialBAMBuilder{samples=[sample0, sample1], readLength=20, alignmentStart=1, skipNLoci=0, nLoci=1000, nReadsPerLocus=1}, 20, 0, 1, 2, 1, 1000) 0.007s passed
testBamProvider[45](ArtificialBAMBuilder{samples=[sample0, sample1], readLength=20, alignmentStart=1, skipNLoci=0, nLoci=10, nReadsPerLocus=10}, 20, 0, 1, 2, 10, 10) 0.002s passed
testBamProvider[46](ArtificialBAMBuilder{samples=[sample0, sample1], readLength=20, alignmentStart=1, skipNLoci=0, nLoci=100, nReadsPerLocus=10}, 20, 0, 1, 2, 10, 100) 0.009s passed
testBamProvider[47](ArtificialBAMBuilder{samples=[sample0, sample1], readLength=20, alignmentStart=1, skipNLoci=0, nLoci=1000, nReadsPerLocus=10}, 20, 0, 1, 2, 10, 1000) 0.107s passed
testBamProvider[48](ArtificialBAMBuilder{samples=[sample0], readLength=20, alignmentStart=1, skipNLoci=1, nLoci=10, nReadsPerLocus=1}, 20, 1, 1, 1, 1, 10) 0.002s passed
testBamProvider[49](ArtificialBAMBuilder{samples=[sample0], readLength=20, alignmentStart=1, skipNLoci=1, nLoci=100, nReadsPerLocus=1}, 20, 1, 1, 1, 1, 100) 0.002s passed
testBamProvider[4](ArtificialBAMBuilder{samples=[sample0], readLength=10, alignmentStart=1, skipNLoci=0, nLoci=100, nReadsPerLocus=10}, 10, 0, 1, 1, 10, 100) 0.014s passed
testBamProvider[50](ArtificialBAMBuilder{samples=[sample0], readLength=20, alignmentStart=1, skipNLoci=1, nLoci=1000, nReadsPerLocus=1}, 20, 1, 1, 1, 1, 1000) 0.004s passed
testBamProvider[51](ArtificialBAMBuilder{samples=[sample0], readLength=20, alignmentStart=1, skipNLoci=1, nLoci=10, nReadsPerLocus=10}, 20, 1, 1, 1, 10, 10) 0.001s passed
testBamProvider[52](ArtificialBAMBuilder{samples=[sample0], readLength=20, alignmentStart=1, skipNLoci=1, nLoci=100, nReadsPerLocus=10}, 20, 1, 1, 1, 10, 100) 0.003s passed
testBamProvider[53](ArtificialBAMBuilder{samples=[sample0], readLength=20, alignmentStart=1, skipNLoci=1, nLoci=1000, nReadsPerLocus=10}, 20, 1, 1, 1, 10, 1000) 0.026s passed
testBamProvider[54](ArtificialBAMBuilder{samples=[sample0, sample1], readLength=20, alignmentStart=1, skipNLoci=1, nLoci=10, nReadsPerLocus=1}, 20, 1, 1, 2, 1, 10) 0.001s passed
testBamProvider[55](ArtificialBAMBuilder{samples=[sample0, sample1], readLength=20, alignmentStart=1, skipNLoci=1, nLoci=100, nReadsPerLocus=1}, 20, 1, 1, 2, 1, 100) 0.002s passed
testBamProvider[56](ArtificialBAMBuilder{samples=[sample0, sample1], readLength=20, alignmentStart=1, skipNLoci=1, nLoci=1000, nReadsPerLocus=1}, 20, 1, 1, 2, 1, 1000) 0.006s passed
testBamProvider[57](ArtificialBAMBuilder{samples=[sample0, sample1], readLength=20, alignmentStart=1, skipNLoci=1, nLoci=10, nReadsPerLocus=10}, 20, 1, 1, 2, 10, 10) 0.002s passed
testBamProvider[58](ArtificialBAMBuilder{samples=[sample0, sample1], readLength=20, alignmentStart=1, skipNLoci=1, nLoci=100, nReadsPerLocus=10}, 20, 1, 1, 2, 10, 100) 0.005s passed
testBamProvider[59](ArtificialBAMBuilder{samples=[sample0, sample1], readLength=20, alignmentStart=1, skipNLoci=1, nLoci=1000, nReadsPerLocus=10}, 20, 1, 1, 2, 10, 1000) 0.089s passed
testBamProvider[5](ArtificialBAMBuilder{samples=[sample0], readLength=10, alignmentStart=1, skipNLoci=0, nLoci=1000, nReadsPerLocus=10}, 10, 0, 1, 1, 10, 1000) 0.111s passed
testBamProvider[60](ArtificialBAMBuilder{samples=[sample0], readLength=20, alignmentStart=1, skipNLoci=10, nLoci=10, nReadsPerLocus=1}, 20, 10, 1, 1, 1, 10) 0.001s passed
testBamProvider[61](ArtificialBAMBuilder{samples=[sample0], readLength=20, alignmentStart=1, skipNLoci=10, nLoci=100, nReadsPerLocus=1}, 20, 10, 1, 1, 1, 100) 0.002s passed
testBamProvider[62](ArtificialBAMBuilder{samples=[sample0], readLength=20, alignmentStart=1, skipNLoci=10, nLoci=1000, nReadsPerLocus=1}, 20, 10, 1, 1, 1, 1000) 0.003s passed
testBamProvider[63](ArtificialBAMBuilder{samples=[sample0], readLength=20, alignmentStart=1, skipNLoci=10, nLoci=10, nReadsPerLocus=10}, 20, 10, 1, 1, 10, 10) 0.002s passed
testBamProvider[64](ArtificialBAMBuilder{samples=[sample0], readLength=20, alignmentStart=1, skipNLoci=10, nLoci=100, nReadsPerLocus=10}, 20, 10, 1, 1, 10, 100) 0.004s passed
testBamProvider[65](ArtificialBAMBuilder{samples=[sample0], readLength=20, alignmentStart=1, skipNLoci=10, nLoci=1000, nReadsPerLocus=10}, 20, 10, 1, 1, 10, 1000) 0.074s passed
testBamProvider[66](ArtificialBAMBuilder{samples=[sample0, sample1], readLength=20, alignmentStart=1, skipNLoci=10, nLoci=10, nReadsPerLocus=1}, 20, 10, 1, 2, 1, 10) 0.002s passed
testBamProvider[67](ArtificialBAMBuilder{samples=[sample0, sample1], readLength=20, alignmentStart=1, skipNLoci=10, nLoci=100, nReadsPerLocus=1}, 20, 10, 1, 2, 1, 100) 0.002s passed
testBamProvider[68](ArtificialBAMBuilder{samples=[sample0, sample1], readLength=20, alignmentStart=1, skipNLoci=10, nLoci=1000, nReadsPerLocus=1}, 20, 10, 1, 2, 1, 1000) 0.005s passed
testBamProvider[69](ArtificialBAMBuilder{samples=[sample0, sample1], readLength=20, alignmentStart=1, skipNLoci=10, nLoci=10, nReadsPerLocus=10}, 20, 10, 1, 2, 10, 10) 0.002s passed
testBamProvider[6](ArtificialBAMBuilder{samples=[sample0, sample1], readLength=10, alignmentStart=1, skipNLoci=0, nLoci=10, nReadsPerLocus=1}, 10, 0, 1, 2, 1, 10) 0.002s passed
testBamProvider[70](ArtificialBAMBuilder{samples=[sample0, sample1], readLength=20, alignmentStart=1, skipNLoci=10, nLoci=100, nReadsPerLocus=10}, 20, 10, 1, 2, 10, 100) 0.005s passed
testBamProvider[71](ArtificialBAMBuilder{samples=[sample0, sample1], readLength=20, alignmentStart=1, skipNLoci=10, nLoci=1000, nReadsPerLocus=10}, 20, 10, 1, 2, 10, 1000) 0.093s passed
testBamProvider[7](ArtificialBAMBuilder{samples=[sample0, sample1], readLength=10, alignmentStart=1, skipNLoci=0, nLoci=100, nReadsPerLocus=1}, 10, 0, 1, 2, 1, 100) 0.005s passed
testBamProvider[8](ArtificialBAMBuilder{samples=[sample0, sample1], readLength=10, alignmentStart=1, skipNLoci=0, nLoci=1000, nReadsPerLocus=1}, 10, 0, 1, 2, 1, 1000) 0.020s passed
testBamProvider[9](ArtificialBAMBuilder{samples=[sample0, sample1], readLength=10, alignmentStart=1, skipNLoci=0, nLoci=10, nReadsPerLocus=10}, 10, 0, 1, 2, 10, 10) 0.004s passed