Class org.broadinstitute.hellbender.utils.spark.SparkUtilsUnitTest

20

tests

0

failures

1

ignored

4.194s

duration

100%

successful

Tests

Test Duration Result
testConvertHeaderlessHadoopBamShardToBam 0.005s passed
testInvalidSort 1.348s passed
testPathExists - ignored
testPutReadsWithSameNameInSamePartition[0](1, 1, 2, [I@211e78f3) 0.505s passed
testPutReadsWithSameNameInSamePartition[10](20, 7, 5, [I@20da7d9) 0.063s passed
testPutReadsWithSameNameInSamePartition[1](2, 2, 2, [I@777fb45d) 0.071s passed
testPutReadsWithSameNameInSamePartition[2](3, 2, 2, [I@da0eaf8) 0.053s passed
testPutReadsWithSameNameInSamePartition[3](3, 3, 2, [I@6184d90d) 0.053s passed
testPutReadsWithSameNameInSamePartition[4](6, 2, 2, [I@3eb69a53) 0.053s passed
testPutReadsWithSameNameInSamePartition[5](6, 3, 2, [I@77b40cb6) 0.047s passed
testPutReadsWithSameNameInSamePartition[6](6, 4, 2, [I@7fe29587) 0.053s passed
testPutReadsWithSameNameInSamePartition[7](2, 2, 3, [I@2c30b44a) 0.038s passed
testPutReadsWithSameNameInSamePartition[8](3, 2, 10, [I@377230b3) 0.040s passed
testPutReadsWithSameNameInSamePartition[9](6, 4, 3, [I@71aad984) 0.047s passed
testReadsMustBeQueryGroupedToFixPartitions 0.001s passed
testReadsPairsSpanningMultiplePartitions 0.324s passed
testSortCoordinateSortMatchesHtsjdk 0.432s passed
testSortQuerynameFixesPartitionBoundaries 0.250s passed
testSortQuerynameSortMatchesHtsjdk 0.737s passed
testSortUsingElementsAsKeys 0.074s passed

Standard error

21:30:14.024 WARN  SparkContextFactory - Environment variables HELLBENDER_TEST_PROJECT and HELLBENDER_JSON_SERVICE_ACCOUNT_KEY must be set or the GCS hadoop connector will not be configured properly
21:30:14.451 WARN  NativeCodeLoader - Unable to load native-hadoop library for your platform... using builtin-java classes where applicable