Standard error
22:03:38.843 INFO TestEmitUncoveredLociTool - ------------------------------------------------------------
22:03:38.843 INFO TestEmitUncoveredLociTool - The Genome Analysis Toolkit (GATK) v4.6.2.0-2-gfa08e16-SNAPSHOT
22:03:38.843 INFO TestEmitUncoveredLociTool - For support and documentation go to https://software.broadinstitute.org/gatk/
22:03:38.843 INFO TestEmitUncoveredLociTool - Executing as root@f99bdcf77b66 on Linux v6.8.0-1021-azure amd64
22:03:38.843 INFO TestEmitUncoveredLociTool - Java runtime: OpenJDK 64-Bit Server VM v17.0.12+7-Ubuntu-1ubuntu222.04
22:03:38.843 INFO TestEmitUncoveredLociTool - Start Date/Time: April 22, 2025 at 10:03:38 PM GMT
22:03:38.843 INFO TestEmitUncoveredLociTool - ------------------------------------------------------------
22:03:38.843 INFO TestEmitUncoveredLociTool - ------------------------------------------------------------
22:03:38.844 INFO TestEmitUncoveredLociTool - HTSJDK Defaults.COMPRESSION_LEVEL : 2
22:03:38.844 INFO TestEmitUncoveredLociTool - HTSJDK Defaults.USE_ASYNC_IO_READ_FOR_SAMTOOLS : false
22:03:38.844 INFO TestEmitUncoveredLociTool - HTSJDK Defaults.USE_ASYNC_IO_WRITE_FOR_SAMTOOLS : true
22:03:38.844 INFO TestEmitUncoveredLociTool - HTSJDK Defaults.USE_ASYNC_IO_WRITE_FOR_TRIBBLE : false
22:03:38.844 INFO TestEmitUncoveredLociTool - Deflater: IntelDeflater
22:03:38.844 INFO TestEmitUncoveredLociTool - Inflater: IntelInflater
22:03:38.844 INFO TestEmitUncoveredLociTool - GCS max retries/reopens: 20
22:03:38.844 INFO TestEmitUncoveredLociTool - Requester pays: disabled
22:03:38.844 INFO TestEmitUncoveredLociTool - Initializing engine
22:03:38.850 INFO IntervalArgumentCollection - Processing 10 bp from intervals
22:03:38.850 INFO TestEmitUncoveredLociTool - Done initializing engine
22:03:38.850 INFO ProgressMeter - Starting traversal
22:03:38.850 INFO ProgressMeter - Current Locus Elapsed Minutes Loci Processed Loci/Minute
22:03:38.852 INFO TestEmitUncoveredLociTool - 0 read(s) filtered by: WellformedReadFilter
0 read(s) filtered by: MappedReadFilter
0 total reads filtered out of 5 reads processed
22:03:38.852 INFO ProgressMeter - unmapped 0.0 10 300000.0
22:03:38.852 INFO ProgressMeter - Traversal complete. Processed 10 total loci in 0.0 minutes.
22:03:38.852 INFO TestEmitUncoveredLociTool - Shutting down engine
[April 22, 2025 at 10:03:38 PM GMT] org.broadinstitute.hellbender.engine.LocusWalkerUnitTest$TestEmitUncoveredLociTool done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=910163968
22:03:38.874 INFO TestTransformedLocusWalker - ------------------------------------------------------------
22:03:38.874 INFO TestTransformedLocusWalker - The Genome Analysis Toolkit (GATK) v4.6.2.0-2-gfa08e16-SNAPSHOT
22:03:38.874 INFO TestTransformedLocusWalker - For support and documentation go to https://software.broadinstitute.org/gatk/
22:03:38.874 INFO TestTransformedLocusWalker - Executing as root@f99bdcf77b66 on Linux v6.8.0-1021-azure amd64
22:03:38.874 INFO TestTransformedLocusWalker - Java runtime: OpenJDK 64-Bit Server VM v17.0.12+7-Ubuntu-1ubuntu222.04
22:03:38.874 INFO TestTransformedLocusWalker - Start Date/Time: April 22, 2025 at 10:03:38 PM GMT
22:03:38.874 INFO TestTransformedLocusWalker - ------------------------------------------------------------
22:03:38.874 INFO TestTransformedLocusWalker - ------------------------------------------------------------
22:03:38.874 INFO TestTransformedLocusWalker - HTSJDK Defaults.COMPRESSION_LEVEL : 2
22:03:38.874 INFO TestTransformedLocusWalker - HTSJDK Defaults.USE_ASYNC_IO_READ_FOR_SAMTOOLS : false
22:03:38.874 INFO TestTransformedLocusWalker - HTSJDK Defaults.USE_ASYNC_IO_WRITE_FOR_SAMTOOLS : true
22:03:38.874 INFO TestTransformedLocusWalker - HTSJDK Defaults.USE_ASYNC_IO_WRITE_FOR_TRIBBLE : false
22:03:38.874 INFO TestTransformedLocusWalker - Deflater: IntelDeflater
22:03:38.874 INFO TestTransformedLocusWalker - Inflater: IntelInflater
22:03:38.874 INFO TestTransformedLocusWalker - GCS max retries/reopens: 20
22:03:38.874 INFO TestTransformedLocusWalker - Requester pays: disabled
22:03:38.874 INFO TestTransformedLocusWalker - Initializing engine
22:03:38.878 INFO IntervalArgumentCollection - Processing 1 bp from intervals
22:03:38.878 INFO TestTransformedLocusWalker - Done initializing engine
22:03:38.878 INFO ProgressMeter - Starting traversal
22:03:38.878 INFO ProgressMeter - Current Locus Elapsed Minutes Loci Processed Loci/Minute
22:03:38.880 INFO TestTransformedLocusWalker - 0 read(s) filtered by:
22:03:38.880 INFO ProgressMeter - unmapped 0.0 1 30000.0
22:03:38.880 INFO ProgressMeter - Traversal complete. Processed 1 total loci in 0.0 minutes.
22:03:38.880 INFO TestTransformedLocusWalker - Shutting down engine
[April 22, 2025 at 10:03:38 PM GMT] org.broadinstitute.hellbender.engine.LocusWalkerUnitTest$TestTransformedLocusWalker done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=910163968