Class org.broadinstitute.hellbender.engine.MultiplePassVariantWalkerUnitTest

22:03:39.525 INFO  DummyMultiplePassVariantWalker - ------------------------------------------------------------
22:03:39.525 INFO  DummyMultiplePassVariantWalker - The Genome Analysis Toolkit (GATK) v4.6.2.0-2-gfa08e16-SNAPSHOT
22:03:39.525 INFO  DummyMultiplePassVariantWalker - For support and documentation go to https://software.broadinstitute.org/gatk/
22:03:39.525 INFO  DummyMultiplePassVariantWalker - Executing as root@f99bdcf77b66 on Linux v6.8.0-1021-azure amd64
22:03:39.525 INFO  DummyMultiplePassVariantWalker - Java runtime: OpenJDK 64-Bit Server VM v17.0.12+7-Ubuntu-1ubuntu222.04
22:03:39.525 INFO  DummyMultiplePassVariantWalker - Start Date/Time: April 22, 2025 at 10:03:39 PM GMT
22:03:39.525 INFO  DummyMultiplePassVariantWalker - ------------------------------------------------------------
22:03:39.525 INFO  DummyMultiplePassVariantWalker - ------------------------------------------------------------
22:03:39.525 INFO  DummyMultiplePassVariantWalker - HTSJDK Defaults.COMPRESSION_LEVEL : 2
22:03:39.525 INFO  DummyMultiplePassVariantWalker - HTSJDK Defaults.USE_ASYNC_IO_READ_FOR_SAMTOOLS : false
22:03:39.525 INFO  DummyMultiplePassVariantWalker - HTSJDK Defaults.USE_ASYNC_IO_WRITE_FOR_SAMTOOLS : true
22:03:39.525 INFO  DummyMultiplePassVariantWalker - HTSJDK Defaults.USE_ASYNC_IO_WRITE_FOR_TRIBBLE : false
22:03:39.525 INFO  DummyMultiplePassVariantWalker - Deflater: IntelDeflater
22:03:39.525 INFO  DummyMultiplePassVariantWalker - Inflater: IntelInflater
22:03:39.525 INFO  DummyMultiplePassVariantWalker - GCS max retries/reopens: 20
22:03:39.525 INFO  DummyMultiplePassVariantWalker - Requester pays: disabled
22:03:39.525 INFO  DummyMultiplePassVariantWalker - Initializing engine
22:03:39.527 INFO  FeatureManager - Using codec VCFCodec to read file file:///gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/walkers/variantutils/VariantsToTable/multiallelic.vcf
22:03:39.528 WARN  IndexUtils - Feature file "file:///gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/walkers/variantutils/VariantsToTable/multiallelic.vcf" appears to contain no sequence dictionary. Attempting to retrieve a sequence dictionary from the associated index file
22:03:39.529 WARN  IndexUtils - Feature file "file:///gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/walkers/variantutils/VariantsToTable/multiallelic.vcf" appears to contain no sequence dictionary. Attempting to retrieve a sequence dictionary from the associated index file
22:03:39.529 WARN  IndexUtils - Feature file "file:///gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/walkers/variantutils/VariantsToTable/multiallelic.vcf" appears to contain no sequence dictionary. Attempting to retrieve a sequence dictionary from the associated index file
22:03:39.529 INFO  DummyMultiplePassVariantWalker - Done initializing engine
22:03:39.529 INFO  ProgressMeter - Starting traversal
22:03:39.529 INFO  ProgressMeter -        Current Locus  Elapsed Minutes    Variants Processed  Variants/Minute
22:03:39.530 INFO  DummyMultiplePassVariantWalker - Starting pass 0 through the variants
22:03:39.532 INFO  DummyMultiplePassVariantWalker - Finished pass 0 through the variants
22:03:39.532 INFO  DummyMultiplePassVariantWalker - Starting pass 1 through the variants
22:03:39.532 INFO  DummyMultiplePassVariantWalker - Finished pass 1 through the variants
22:03:39.532 INFO  DummyMultiplePassVariantWalker - No variants filtered by: AllowAllVariantsVariantFilter
22:03:39.533 INFO  DummyMultiplePassVariantWalker - 0 read(s) filtered by: AllowAllReadsReadFilter 

22:03:39.533 INFO  ProgressMeter -             unmapped              0.0                   104        1560000.0
22:03:39.533 INFO  ProgressMeter - Traversal complete. Processed 104 total variants in 0.0 minutes.
22:03:39.533 INFO  DummyMultiplePassVariantWalker - Shutting down engine
[April 22, 2025 at 10:03:39 PM GMT] org.broadinstitute.hellbender.engine.MultiplePassVariantWalkerUnitTest$DummyMultiplePassVariantWalker done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=910163968