Class org.broadinstitute.hellbender.tools.spark.pathseq.PSUtilsTest
|
100%
successful |
Tests
| Test | Duration | Result |
|---|---|---|
| testCheckAndClearHeaderSequences | 0.002s | passed |
| testLogItemizedWarning | 0s | passed |
| testParseMaskException[0](0,-1, 31) | 0s | passed |
| testParseMaskException[1](0,31, 31) | 0s | passed |
| testParseMask[0](, 31, [B@47a532d9) | 0s | passed |
| testParseMask[1](0,1, 31, [B@409e4611) | 0s | passed |
| testParseMask[2](0,1,, 31, [B@5d8a0b6) | 0s | passed |
| testParseMask[3](0,1,10,8, 31, [B@20a0eb1d) | 0s | passed |
| testParseMask[4](30, 31, [B@205fc00e) | 0s | passed |
| testPrimaryReads | 0.019s | passed |
Standard error
22:10:58.630 WARN gatk - --is-host-aligned is false but there are one or more sequences in the BAM header 22:10:58.630 WARN gatk - Test warning statement : x, y, z