Class org.broadinstitute.hellbender.utils.nio.NioFileCopierWithProgressMeterUnitTest

42

tests

0

failures

0

ignored

0.010s

duration

100%

successful

Tests

Test Duration Result
testCreate[0](/gatkCloneMountPoint/src/test/resources/large/funcotator/GRCh37.p13.chr19.tar.gz, /tmp/tmp15903749648765523502.tar.gz, true, MODERATE) 0.002s passed
testCreate[1](/gatkCloneMountPoint/src/test/resources/large/funcotator/gencode.v19.pc_transcripts.fasta, /tmp/tmp215487482130831200411.fasta, false, MODERATE) 0s passed
testCreate[2](/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/funcotator/dbSNP_hg19_snippet.vcf, /tmp/tmp311029003308082339324.vcf, true, MINIMAL) 0s passed
testCreate[3](/gatkCloneMountPoint/src/test/resources/large/funcotator/hg38.3.tar.gz, /tmp/tmp43090558800608426112.fasta, false, MINIMAL) 0.001s passed
testCreate[4](/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/funcotator/PIK3CA_INDELS, /tmp/tmp518365945934240970977.vcf, null, MINIMAL) 0s passed
testCreate[5](/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/funcotator/xsv_DEADBEEFSV_testFile.csv, /tmp/tmp61831072137632669028.xsv, false, null) 0s passed
testCreate[6](/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/funcotator/snpTest_chr19_hg19.vcf, /tmp/tmp717686969668192480894.vcf, null, null) 0s passed
testGetDest[0](/gatkCloneMountPoint/src/test/resources/large/funcotator/GRCh37.p13.chr19.tar.gz, /tmp/tmp15507743828266436234.tar.gz, true, MODERATE) 0s passed
testGetDest[1](/gatkCloneMountPoint/src/test/resources/large/funcotator/gencode.v19.pc_transcripts.fasta, /tmp/tmp215623542047838087937.fasta, false, MODERATE) 0s passed
testGetDest[2](/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/funcotator/dbSNP_hg19_snippet.vcf, /tmp/tmp38548270682738085605.vcf, true, MINIMAL) 0.001s passed
testGetDest[3](/gatkCloneMountPoint/src/test/resources/large/funcotator/hg38.3.tar.gz, /tmp/tmp49284826188801071148.fasta, false, MINIMAL) 0s passed
testGetDest[4](/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/funcotator/PIK3CA_INDELS, /tmp/tmp514347864795144053791.vcf, null, MINIMAL) 0s passed
testGetDest[5](/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/funcotator/xsv_DEADBEEFSV_testFile.csv, /tmp/tmp615049631627105968922.xsv, false, null) 0s passed
testGetDest[6](/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/funcotator/snpTest_chr19_hg19.vcf, /tmp/tmp72174981147576238434.vcf, null, null) 0s passed
testGetSource[0](/gatkCloneMountPoint/src/test/resources/large/funcotator/GRCh37.p13.chr19.tar.gz, /tmp/tmp7964248290671127037.tar.gz, true, MODERATE) 0s passed
testGetSource[1](/gatkCloneMountPoint/src/test/resources/large/funcotator/gencode.v19.pc_transcripts.fasta, /tmp/tmp25541796657793115501.fasta, false, MODERATE) 0s passed
testGetSource[2](/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/funcotator/dbSNP_hg19_snippet.vcf, /tmp/tmp36799411827327542310.vcf, true, MINIMAL) 0s passed
testGetSource[3](/gatkCloneMountPoint/src/test/resources/large/funcotator/hg38.3.tar.gz, /tmp/tmp41134716648051957522.fasta, false, MINIMAL) 0s passed
testGetSource[4](/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/funcotator/PIK3CA_INDELS, /tmp/tmp51245905878924745116.vcf, null, MINIMAL) 0s passed
testGetSource[5](/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/funcotator/xsv_DEADBEEFSV_testFile.csv, /tmp/tmp64857741537026125452.xsv, false, null) 0s passed
testGetSource[6](/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/funcotator/snpTest_chr19_hg19.vcf, /tmp/tmp711231759534475244252.vcf, null, null) 0s passed
testIsDoLogProgress[0](/gatkCloneMountPoint/src/test/resources/large/funcotator/GRCh37.p13.chr19.tar.gz, /tmp/tmp12080218092893174394.tar.gz, true, MODERATE) 0.001s passed
testIsDoLogProgress[1](/gatkCloneMountPoint/src/test/resources/large/funcotator/gencode.v19.pc_transcripts.fasta, /tmp/tmp28310769835622434882.fasta, false, MODERATE) 0s passed
testIsDoLogProgress[2](/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/funcotator/dbSNP_hg19_snippet.vcf, /tmp/tmp34476205698874327021.vcf, true, MINIMAL) 0s passed
testIsDoLogProgress[3](/gatkCloneMountPoint/src/test/resources/large/funcotator/hg38.3.tar.gz, /tmp/tmp415951383321464903536.fasta, false, MINIMAL) 0.001s passed
testIsDoLogProgress[4](/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/funcotator/PIK3CA_INDELS, /tmp/tmp51801084148807179037.vcf, null, MINIMAL) 0s passed
testIsDoLogProgress[5](/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/funcotator/xsv_DEADBEEFSV_testFile.csv, /tmp/tmp63891167874667885106.xsv, false, null) 0s passed
testIsDoLogProgress[6](/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/funcotator/snpTest_chr19_hg19.vcf, /tmp/tmp711736237600322804177.vcf, null, null) 0s passed
testIsOverwriteExisting[0](/gatkCloneMountPoint/src/test/resources/large/funcotator/GRCh37.p13.chr19.tar.gz, /tmp/tmp9825806724232776145.tar.gz, true, MODERATE) 0.001s passed
testIsOverwriteExisting[1](/gatkCloneMountPoint/src/test/resources/large/funcotator/gencode.v19.pc_transcripts.fasta, /tmp/tmp21600708717144178071.fasta, false, MODERATE) 0s passed
testIsOverwriteExisting[2](/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/funcotator/dbSNP_hg19_snippet.vcf, /tmp/tmp311176763178827051005.vcf, true, MINIMAL) 0s passed
testIsOverwriteExisting[3](/gatkCloneMountPoint/src/test/resources/large/funcotator/hg38.3.tar.gz, /tmp/tmp414125804384256032601.fasta, false, MINIMAL) 0.001s passed
testIsOverwriteExisting[4](/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/funcotator/PIK3CA_INDELS, /tmp/tmp5997387733506428878.vcf, null, MINIMAL) 0s passed
testIsOverwriteExisting[5](/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/funcotator/xsv_DEADBEEFSV_testFile.csv, /tmp/tmp613531269399839691934.xsv, false, null) 0s passed
testIsOverwriteExisting[6](/gatkCloneMountPoint/src/test/resources/org/broadinstitute/hellbender/tools/funcotator/snpTest_chr19_hg19.vcf, /tmp/tmp71383385151291102757.vcf, null, null) 0.001s passed
testSetOverwriteExisting[0](/gatkCloneMountPoint/src/test/resources/large/funcotator/GRCh37.p13.chr19.tar.gz, /tmp/tmp14232449714129830652.tar.gz, false, MODERATE, false) 0s passed
testSetOverwriteExisting[1](/gatkCloneMountPoint/src/test/resources/large/funcotator/GRCh37.p13.chr19.tar.gz, /tmp/tmp13529982377861565940.tar.gz, true, MODERATE, true) 0s passed
testSetVerbosity[0](/gatkCloneMountPoint/src/test/resources/large/funcotator/GRCh37.p13.chr19.tar.gz, /tmp/tmp17746537843543631973.tar.gz, true, MODERATE, MODERATE) 0s passed
testSetVerbosity[1](/gatkCloneMountPoint/src/test/resources/large/funcotator/GRCh37.p13.chr19.tar.gz, /tmp/tmp11442057089856165985.tar.gz, true, MINIMAL, MINIMAL) 0s passed
testSetVerbosity[2](/gatkCloneMountPoint/src/test/resources/large/funcotator/GRCh37.p13.chr19.tar.gz, /tmp/tmp11294206510594343368.tar.gz, true, SILENT, SILENT) 0s passed
testSetVerbosity[3](/gatkCloneMountPoint/src/test/resources/large/funcotator/GRCh37.p13.chr19.tar.gz, /tmp/tmp4041045758513806499.tar.gz, true, VERBOSE, VERBOSE) 0.001s passed
testSetVerbosity[4](/gatkCloneMountPoint/src/test/resources/large/funcotator/GRCh37.p13.chr19.tar.gz, /tmp/tmp14125215690480599517.tar.gz, true, null, MODERATE) 0s passed