Standard error
16:12:11.440 INFO TestEmitUncoveredLociTool - ------------------------------------------------------------
16:12:11.441 INFO TestEmitUncoveredLociTool - The Genome Analysis Toolkit (GATK) v4.6.2.0-4-g6e00a37-SNAPSHOT
16:12:11.441 INFO TestEmitUncoveredLociTool - For support and documentation go to https://software.broadinstitute.org/gatk/
16:12:11.441 INFO TestEmitUncoveredLociTool - Executing as root@a34d5a30ed3f on Linux v6.11.0-1013-azure amd64
16:12:11.441 INFO TestEmitUncoveredLociTool - Java runtime: OpenJDK 64-Bit Server VM v17.0.12+7-Ubuntu-1ubuntu222.04
16:12:11.441 INFO TestEmitUncoveredLociTool - Start Date/Time: May 5, 2025 at 4:12:11 PM GMT
16:12:11.441 INFO TestEmitUncoveredLociTool - ------------------------------------------------------------
16:12:11.441 INFO TestEmitUncoveredLociTool - ------------------------------------------------------------
16:12:11.441 INFO TestEmitUncoveredLociTool - HTSJDK Defaults.COMPRESSION_LEVEL : 2
16:12:11.441 INFO TestEmitUncoveredLociTool - HTSJDK Defaults.USE_ASYNC_IO_READ_FOR_SAMTOOLS : false
16:12:11.441 INFO TestEmitUncoveredLociTool - HTSJDK Defaults.USE_ASYNC_IO_WRITE_FOR_SAMTOOLS : true
16:12:11.441 INFO TestEmitUncoveredLociTool - HTSJDK Defaults.USE_ASYNC_IO_WRITE_FOR_TRIBBLE : false
16:12:11.441 INFO TestEmitUncoveredLociTool - Deflater: IntelDeflater
16:12:11.441 INFO TestEmitUncoveredLociTool - Inflater: IntelInflater
16:12:11.441 INFO TestEmitUncoveredLociTool - GCS max retries/reopens: 20
16:12:11.441 INFO TestEmitUncoveredLociTool - Requester pays: disabled
16:12:11.441 INFO TestEmitUncoveredLociTool - Initializing engine
16:12:11.446 INFO IntervalArgumentCollection - Processing 10 bp from intervals
16:12:11.446 INFO TestEmitUncoveredLociTool - Done initializing engine
16:12:11.446 INFO ProgressMeter - Starting traversal
16:12:11.446 INFO ProgressMeter - Current Locus Elapsed Minutes Loci Processed Loci/Minute
16:12:11.448 INFO TestEmitUncoveredLociTool - 0 read(s) filtered by: WellformedReadFilter
0 read(s) filtered by: MappedReadFilter
0 total reads filtered out of 5 reads processed
16:12:11.448 INFO ProgressMeter - unmapped 0.0 10 300000.0
16:12:11.448 INFO ProgressMeter - Traversal complete. Processed 10 total loci in 0.0 minutes.
16:12:11.448 INFO TestEmitUncoveredLociTool - Shutting down engine
[May 5, 2025 at 4:12:11 PM GMT] org.broadinstitute.hellbender.engine.LocusWalkerUnitTest$TestEmitUncoveredLociTool done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1048576000
16:12:11.469 INFO TestTransformedLocusWalker - ------------------------------------------------------------
16:12:11.470 INFO TestTransformedLocusWalker - The Genome Analysis Toolkit (GATK) v4.6.2.0-4-g6e00a37-SNAPSHOT
16:12:11.470 INFO TestTransformedLocusWalker - For support and documentation go to https://software.broadinstitute.org/gatk/
16:12:11.470 INFO TestTransformedLocusWalker - Executing as root@a34d5a30ed3f on Linux v6.11.0-1013-azure amd64
16:12:11.470 INFO TestTransformedLocusWalker - Java runtime: OpenJDK 64-Bit Server VM v17.0.12+7-Ubuntu-1ubuntu222.04
16:12:11.470 INFO TestTransformedLocusWalker - Start Date/Time: May 5, 2025 at 4:12:11 PM GMT
16:12:11.470 INFO TestTransformedLocusWalker - ------------------------------------------------------------
16:12:11.470 INFO TestTransformedLocusWalker - ------------------------------------------------------------
16:12:11.470 INFO TestTransformedLocusWalker - HTSJDK Defaults.COMPRESSION_LEVEL : 2
16:12:11.470 INFO TestTransformedLocusWalker - HTSJDK Defaults.USE_ASYNC_IO_READ_FOR_SAMTOOLS : false
16:12:11.470 INFO TestTransformedLocusWalker - HTSJDK Defaults.USE_ASYNC_IO_WRITE_FOR_SAMTOOLS : true
16:12:11.470 INFO TestTransformedLocusWalker - HTSJDK Defaults.USE_ASYNC_IO_WRITE_FOR_TRIBBLE : false
16:12:11.470 INFO TestTransformedLocusWalker - Deflater: IntelDeflater
16:12:11.470 INFO TestTransformedLocusWalker - Inflater: IntelInflater
16:12:11.470 INFO TestTransformedLocusWalker - GCS max retries/reopens: 20
16:12:11.470 INFO TestTransformedLocusWalker - Requester pays: disabled
16:12:11.470 INFO TestTransformedLocusWalker - Initializing engine
16:12:11.474 INFO IntervalArgumentCollection - Processing 1 bp from intervals
16:12:11.474 INFO TestTransformedLocusWalker - Done initializing engine
16:12:11.475 INFO ProgressMeter - Starting traversal
16:12:11.475 INFO ProgressMeter - Current Locus Elapsed Minutes Loci Processed Loci/Minute
16:12:11.476 INFO TestTransformedLocusWalker - 0 read(s) filtered by:
16:12:11.477 INFO ProgressMeter - unmapped 0.0 1 60000.0
16:12:11.477 INFO ProgressMeter - Traversal complete. Processed 1 total loci in 0.0 minutes.
16:12:11.477 INFO TestTransformedLocusWalker - Shutting down engine
[May 5, 2025 at 4:12:11 PM GMT] org.broadinstitute.hellbender.engine.LocusWalkerUnitTest$TestTransformedLocusWalker done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1048576000