Class org.broadinstitute.hellbender.engine.spark.GATKSparkToolUnitTest

1

tests

0

failures

0

ignored

0.018s

duration

100%

successful

Tests

Test Duration Result
testGetDefaultToolVCFHeaderLines 0.018s passed

Standard error

16:12:13.463 INFO  TestGATKSparkToolWithVariants - ------------------------------------------------------------
16:12:13.463 INFO  TestGATKSparkToolWithVariants - The Genome Analysis Toolkit (GATK) v4.6.2.0-4-g6e00a37-SNAPSHOT
16:12:13.463 INFO  TestGATKSparkToolWithVariants - For support and documentation go to https://software.broadinstitute.org/gatk/
16:12:13.463 INFO  TestGATKSparkToolWithVariants - Executing as root@a34d5a30ed3f on Linux v6.11.0-1013-azure amd64
16:12:13.463 INFO  TestGATKSparkToolWithVariants - Java runtime: OpenJDK 64-Bit Server VM v17.0.12+7-Ubuntu-1ubuntu222.04
16:12:13.463 INFO  TestGATKSparkToolWithVariants - Start Date/Time: May 5, 2025 at 4:12:13 PM GMT
16:12:13.463 INFO  TestGATKSparkToolWithVariants - ------------------------------------------------------------
16:12:13.463 INFO  TestGATKSparkToolWithVariants - ------------------------------------------------------------
16:12:13.463 INFO  TestGATKSparkToolWithVariants - HTSJDK Defaults.COMPRESSION_LEVEL : 2
16:12:13.463 INFO  TestGATKSparkToolWithVariants - HTSJDK Defaults.USE_ASYNC_IO_READ_FOR_SAMTOOLS : false
16:12:13.463 INFO  TestGATKSparkToolWithVariants - HTSJDK Defaults.USE_ASYNC_IO_WRITE_FOR_SAMTOOLS : true
16:12:13.463 INFO  TestGATKSparkToolWithVariants - HTSJDK Defaults.USE_ASYNC_IO_WRITE_FOR_TRIBBLE : false
16:12:13.463 INFO  TestGATKSparkToolWithVariants - Deflater: IntelDeflater
16:12:13.463 INFO  TestGATKSparkToolWithVariants - Inflater: IntelInflater
16:12:13.463 INFO  TestGATKSparkToolWithVariants - GCS max retries/reopens: 20
16:12:13.463 INFO  TestGATKSparkToolWithVariants - Requester pays: disabled
16:12:13.463 INFO  TestGATKSparkToolWithVariants - Initializing engine
16:12:13.463 INFO  TestGATKSparkToolWithVariants - Done initializing engine
16:12:13.464 INFO  TestGATKSparkToolWithVariants - Spark verbosity set to INFO (see --spark-verbosity argument)
16:12:13.465 INFO  TestGATKSparkToolWithVariants - Shutting down engine
[May 5, 2025 at 4:12:13 PM GMT] org.broadinstitute.hellbender.engine.spark.GATKSparkToolUnitTest$TestGATKSparkToolWithVariants done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=1048576000