| Test |
Duration |
Result |
| testEmptyPileup |
0.003s |
passed |
| testFixOverlappingQualitiesDeletedElements |
0s |
passed |
| testFixPairOverlappingQualitiesCap |
0s |
passed |
| testFixPairOverlappingQualitiesFromReadPileup[0](default_read @ 0 = A Q60, default_read @ 0 = A Q10, 70, 0) |
0.002s |
passed |
| testFixPairOverlappingQualitiesFromReadPileup[1](default_read @ 1 = A Q60, default_read @ 1 = T Q60, 48, 0) |
0s |
passed |
| testFixPairOverlappingQualitiesFromReadPileup[2](default_read @ 2 = A Q60, default_read @ 2 = T Q10, 48, 0) |
0s |
passed |
| testFixPairOverlappingQualitiesFromReadPileup[3](default_read @ 3 = A Q10, default_read @ 3 = T Q60, 0, 48) |
0s |
passed |
| testFixPairOverlappingQualitiesFromReadPileup[4](default_read @ 4 = T Q60, default_read @ 4 = T Q60, 93, 0) |
0s |
passed |
| testFixPairOverlappingQualitiesFromReadPileup[5](default_read @ 5 = T Q93, default_read @ 5 = T Q93, 93, 0) |
0s |
passed |
| testFixPairOverlappingQualities[0](default_read @ 0 = A Q60, default_read @ 0 = A Q10, 70, 0) |
0s |
passed |
| testFixPairOverlappingQualities[1](default_read @ 1 = A Q60, default_read @ 1 = T Q60, 48, 0) |
0s |
passed |
| testFixPairOverlappingQualities[2](default_read @ 2 = A Q60, default_read @ 2 = T Q10, 48, 0) |
0s |
passed |
| testFixPairOverlappingQualities[3](default_read @ 3 = A Q10, default_read @ 3 = T Q60, 0, 48) |
0s |
passed |
| testFixPairOverlappingQualities[4](default_read @ 4 = T Q60, default_read @ 4 = T Q60, 93, 0) |
0.001s |
passed |
| testFixPairOverlappingQualities[5](default_read @ 5 = T Q93, default_read @ 5 = T Q93, 93, 0) |
0s |
passed |
| testGetPileup |
0.006s |
passed |
| testGetPileupForSample |
0.003s |
passed |
| testInvalidConstructorParametersReadsAndOffsetsLists |
0s |
passed |
| testOverlappingFragmentFilter |
0.001s |
passed |
| testReadPileupCountingTestSinglePileup[0](ReadPileupCountTest{sample='sampledc11ad7e-f646-4ab2-9b5e-1b507d31063f', nReads=10, nMapq0=0, nDeletions=0}) |
0.004s |
passed |
| testReadPileupCountingTestSinglePileup[10](ReadPileupCountTest{sample='sample8579e683-1840-4f43-b740-ecedb7713f73', nReads=30, nMapq0=10, nDeletions=0}) |
0.001s |
passed |
| testReadPileupCountingTestSinglePileup[11](ReadPileupCountTest{sample='sample3270917f-7cfc-411a-ba78-75509fea5ee4', nReads=20, nMapq0=10, nDeletions=10}) |
0s |
passed |
| testReadPileupCountingTestSinglePileup[12](ReadPileupCountTest{sample='sample537dd95e-9f24-4c2e-aa71-5be30e6ee6c6', nReads=30, nMapq0=10, nDeletions=10}) |
0s |
passed |
| testReadPileupCountingTestSinglePileup[13](ReadPileupCountTest{sample='sample0b5eedbb-c37b-41e3-9538-ddcb7f9ef7d7', nReads=40, nMapq0=10, nDeletions=10}) |
0s |
passed |
| testReadPileupCountingTestSinglePileup[14](ReadPileupCountTest{sample='sample62849f17-e512-4efa-aeeb-81f106c9390a', nReads=30, nMapq0=10, nDeletions=20}) |
0s |
passed |
| testReadPileupCountingTestSinglePileup[15](ReadPileupCountTest{sample='sample11d8381d-42de-4651-98fd-979cc5e462d6', nReads=40, nMapq0=10, nDeletions=20}) |
0.001s |
passed |
| testReadPileupCountingTestSinglePileup[16](ReadPileupCountTest{sample='sample2aab1db5-c5ee-498e-b1c2-8103a8b9c26a', nReads=50, nMapq0=10, nDeletions=20}) |
0s |
passed |
| testReadPileupCountingTestSinglePileup[17](ReadPileupCountTest{sample='sample7216d746-e985-45ea-bd66-ba2ff0fcea37', nReads=20, nMapq0=20, nDeletions=0}) |
0s |
passed |
| testReadPileupCountingTestSinglePileup[18](ReadPileupCountTest{sample='sampled769f410-4440-4571-8032-1adfabb61f9b', nReads=30, nMapq0=20, nDeletions=0}) |
0s |
passed |
| testReadPileupCountingTestSinglePileup[19](ReadPileupCountTest{sample='sample5376be68-90ac-40da-ae66-86bcdc805a19', nReads=40, nMapq0=20, nDeletions=0}) |
0s |
passed |
| testReadPileupCountingTestSinglePileup[1](ReadPileupCountTest{sample='sample594423c8-d922-488c-bb55-23d6f59f7215', nReads=20, nMapq0=0, nDeletions=0}) |
0s |
passed |
| testReadPileupCountingTestSinglePileup[20](ReadPileupCountTest{sample='samplec12e49fd-3218-4b86-a603-8357629b41fb', nReads=30, nMapq0=20, nDeletions=10}) |
0s |
passed |
| testReadPileupCountingTestSinglePileup[21](ReadPileupCountTest{sample='sample4dda2181-2779-4b90-98f9-c98f542a8b32', nReads=40, nMapq0=20, nDeletions=10}) |
0.001s |
passed |
| testReadPileupCountingTestSinglePileup[22](ReadPileupCountTest{sample='sample57cf1686-8455-4317-84ce-71e5b9dd3f1a', nReads=50, nMapq0=20, nDeletions=10}) |
0s |
passed |
| testReadPileupCountingTestSinglePileup[23](ReadPileupCountTest{sample='samplec0cf4a3e-a590-4ab9-b7ae-7b1b464b1ce6', nReads=40, nMapq0=20, nDeletions=20}) |
0s |
passed |
| testReadPileupCountingTestSinglePileup[24](ReadPileupCountTest{sample='samplebe3fdf4c-5ca6-408f-8fa3-be2813ed203b', nReads=50, nMapq0=20, nDeletions=20}) |
0s |
passed |
| testReadPileupCountingTestSinglePileup[25](ReadPileupCountTest{sample='sample9d22aef9-f2ba-442c-a7d3-36e3c0fbc203', nReads=60, nMapq0=20, nDeletions=20}) |
0s |
passed |
| testReadPileupCountingTestSinglePileup[2](ReadPileupCountTest{sample='sample4dbf1077-5e0f-43da-9546-9b2e58f14413', nReads=10, nMapq0=0, nDeletions=10}) |
0s |
passed |
| testReadPileupCountingTestSinglePileup[3](ReadPileupCountTest{sample='sample613f7e2c-a9dc-4b6c-9919-eda1fb49f70a', nReads=20, nMapq0=0, nDeletions=10}) |
0s |
passed |
| testReadPileupCountingTestSinglePileup[4](ReadPileupCountTest{sample='sample5c4fece4-7687-4abc-afa3-fe5770b5ea83', nReads=30, nMapq0=0, nDeletions=10}) |
0.001s |
passed |
| testReadPileupCountingTestSinglePileup[5](ReadPileupCountTest{sample='sample946c0628-c84e-4ef2-a6f3-5e61957198fb', nReads=20, nMapq0=0, nDeletions=20}) |
0s |
passed |
| testReadPileupCountingTestSinglePileup[6](ReadPileupCountTest{sample='sample4ab84e3a-a51e-4064-bd6a-30a646fac5d9', nReads=30, nMapq0=0, nDeletions=20}) |
0s |
passed |
| testReadPileupCountingTestSinglePileup[7](ReadPileupCountTest{sample='sampleff0d2790-5136-4094-b7ca-7964ed6d898c', nReads=40, nMapq0=0, nDeletions=20}) |
0s |
passed |
| testReadPileupCountingTestSinglePileup[8](ReadPileupCountTest{sample='sample6c295bec-8726-44fc-b0cd-5d180ee0915e', nReads=10, nMapq0=10, nDeletions=0}) |
0s |
passed |
| testReadPileupCountingTestSinglePileup[9](ReadPileupCountTest{sample='sample32bda1e9-c022-42c9-8e28-1cae7e745708', nReads=20, nMapq0=10, nDeletions=0}) |
0s |
passed |
| testReadPileupMappingQuals |
0s |
passed |
| testSimplePileup |
0.001s |
passed |
| testSimplePileupWithIndelsOffset |
0.001s |
passed |
| testSimplePileupWithOffset |
0.002s |
passed |
| testSortedIterator |
0s |
passed |
| testSplitByNullReadGroups |
0.001s |
passed |
| testSplitByReadGroup |
0s |
passed |
| testSplitBySampleMissingReadGroupException |
0.001s |
passed |