Class org.broadinstitute.hellbender.tools.CountVariantsIntegrationTest

all > org.broadinstitute.hellbender.tools > CountVariantsIntegrationTest
10

tests
0

failures
0

ignored
7.051s

duration
100%

successful

Tests

Test Duration Result
testCountVariantsWithOutputFile[0](src/test/resources/org/broadinstitute/hellbender/tools/count_variants.vcf, , 26) 0.068s passed
testCountVariantsWithOutputFile[1](src/test/resources/org/broadinstitute/hellbender/tools/count_variants.blockgz.gz, , 26) 0.065s passed
testCountVariantsWithOutputFile[2](src/test/resources/org/broadinstitute/hellbender/tools/count_variants_withSequenceDict.vcf, , 26) 0.063s passed
testCountVariantsWithOutputFile[3](src/test/resources/org/broadinstitute/hellbender/tools/count_variants_withSequenceDict.vcf, -L 1, 14) 0.063s passed
testCountVariantsWithOutputFile[4](/home/runner/work/gatk/gatk/src/test/resources/large/dbsnp_138.b37.1.1-65M.vcf, , 1375319) 3.137s passed
testCountVariants[0](src/test/resources/org/broadinstitute/hellbender/tools/count_variants.vcf, , 26) 0.060s passed
testCountVariants[1](src/test/resources/org/broadinstitute/hellbender/tools/count_variants.blockgz.gz, , 26) 0.062s passed
testCountVariants[2](src/test/resources/org/broadinstitute/hellbender/tools/count_variants_withSequenceDict.vcf, , 26) 0.067s passed
testCountVariants[3](src/test/resources/org/broadinstitute/hellbender/tools/count_variants_withSequenceDict.vcf, -L 1, 14) 0.064s passed
testCountVariants[4](/home/runner/work/gatk/gatk/src/test/resources/large/dbsnp_138.b37.1.1-65M.vcf, , 1375319) 3.402s passed

Standard error

[March 28, 2025 at 10:35:29 PM UTC] org.broadinstitute.hellbender.tools.walkers.CountVariants done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=524288000
[March 28, 2025 at 10:35:29 PM UTC] org.broadinstitute.hellbender.tools.walkers.CountVariants done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=524288000
[March 28, 2025 at 10:35:29 PM UTC] org.broadinstitute.hellbender.tools.walkers.CountVariants done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=524288000
[March 28, 2025 at 10:35:29 PM UTC] org.broadinstitute.hellbender.tools.walkers.CountVariants done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=524288000
[March 28, 2025 at 10:35:32 PM UTC] org.broadinstitute.hellbender.tools.walkers.CountVariants done. Elapsed time: 0.06 minutes.
Runtime.totalMemory()=524288000
[March 28, 2025 at 10:35:32 PM UTC] org.broadinstitute.hellbender.tools.walkers.CountVariants done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=524288000
[March 28, 2025 at 10:35:33 PM UTC] org.broadinstitute.hellbender.tools.walkers.CountVariants done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=524288000
[March 28, 2025 at 10:35:33 PM UTC] org.broadinstitute.hellbender.tools.walkers.CountVariants done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=524288000
[March 28, 2025 at 10:35:33 PM UTC] org.broadinstitute.hellbender.tools.walkers.CountVariants done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=524288000
[March 28, 2025 at 10:35:36 PM UTC] org.broadinstitute.hellbender.tools.walkers.CountVariants done. Elapsed time: 0.05 minutes.
Runtime.totalMemory()=524288000