Class org.broadinstitute.hellbender.tools.funcotator.FuncotateSegmentsIntegrationTest

all > org.broadinstitute.hellbender.tools.funcotator > FuncotateSegmentsIntegrationTest
6

tests
0

failures
0

ignored
14.073s

duration
100%

successful

Tests

Test Duration Result
testEmptyGatkCalledSegmentFile 0.150s passed
testGatkCalledSegmentFile 1.415s passed
testHg38CalledCopyRatioSegmentsGatkFile 3.280s passed
testModelSegmentsGatkFile 9.048s passed
testSimpleMultipleGenesOverlap[0]([3:2000000-2500000, 3:3000000-3500000, 3:3500001-3900000], [CNTN4,CNTN4-AS2, CNTN4,CNTN4-AS1, ], [, CNTN4, ], [CNTN4, , ], [, , ], [, , ], [0, -, +], [0.037099, 0.001748, 0.501748], [2000, 3000, 4000], [SAMPLE1, SAMPLE1, SAMPLE1]) 0.095s passed
testSimpleNoOverlap 0.085s passed

Standard error

[March 28, 2025 at 10:40:30 PM UTC] org.broadinstitute.hellbender.tools.funcotator.FuncotateSegments done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=2210398208
[March 28, 2025 at 10:40:31 PM UTC] org.broadinstitute.hellbender.tools.funcotator.FuncotateSegments done. Elapsed time: 0.02 minutes.
Runtime.totalMemory()=2210398208
[March 28, 2025 at 10:40:35 PM UTC] org.broadinstitute.hellbender.tools.funcotator.FuncotateSegments done. Elapsed time: 0.05 minutes.
Runtime.totalMemory()=2210398208
[March 28, 2025 at 10:40:44 PM UTC] org.broadinstitute.hellbender.tools.funcotator.FuncotateSegments done. Elapsed time: 0.15 minutes.
Runtime.totalMemory()=2269118464
[March 28, 2025 at 10:40:44 PM UTC] org.broadinstitute.hellbender.tools.funcotator.FuncotateSegments done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=2269118464
[March 28, 2025 at 10:40:44 PM UTC] org.broadinstitute.hellbender.tools.funcotator.FuncotateSegments done. Elapsed time: 0.00 minutes.
Runtime.totalMemory()=2269118464